Clc09G00110 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCATGTTCATGACTCTTCACGTTAACTTTGGTAACTGACATGTGAGTCTTACTTTCATCCACAAAACTCCTTTCTTCATACTCAACTCCAACTATTATAAATAACACCAAAGCCCCTCACTGAGCTTCTACAACCATTAGAGTTCCTTATTTCAATCAACACCCAAAAACCTAAGTCAAGTGTTCAAGTTCTTTCAGAAAAACCAAACATTTCCTTTCATTTGTCATTTGTCAAATGGCACCTCATGGAGAGGCTATTTCAAGGAGCAACAACTTCTCAAAGCCACCAAGGCTTTCATCCAATGGCCTCCAAAGAACAATCTCAGATATATCAATGGAATTGGGGAAGGAGTTGGCGATAACATCAGATACCAAACAAGTTGCACTTCCACCAATATCTGAGATTGAGGATGCACGATGTGAATGTTGTGGAATGTGCGAGGAGTACACACAAGAGTACATCGATCGAATGCGAGACAAGTTCCTTGGGAAGTGGATATGCGGGCTCTGCGCCGAGGCCGTGGAAGGCGAAGTGGAGAAGCACGGAGGGAGCAAAGAGGCAGCATTGAACTCGCACATGAGCGCCTGTGTAAGGTTTAACAAACTGGGGAGGGCTTATCCTGTGTTGTTTCAAGCTGAGGCAATGAGAGAGATGTTGAAGAAGAGTAGGATGGATGGGAGAGATGGTTTTAGGGCTAAGTCTTTGAGTCCTAGAGACAAAGCTGCAGTTCAAAAGAAGGGTGGGATTGCTAGGAGTTCAAGCTGCATTCCAGCCATCATTAGATCAGAGGATCTTAACAATCTCAAACTGCAAAACTAATTCATATTTTGCCTGAGATCTTCTAATTTTAGCCACTTTAACTATCCTTTATTTCCTCCATTCCTATTTCCCATCTTAACCTCTACTAAATTTCAGTTAACTTCCGTTGCTGTCTTTTGAATCTTCTTCAACACCTAGTTACATCACCTGGTTTGAACGGTAATTTTTTTCTAGGTGGGCTTCTTTATATTTTTGCTTCCCTTTCATGGGTTTTTTTTTTCTTTCTTTCTTTTTTCTGCAGTAAAAGAGTACCTTGAAGTTGGTATTTGTTTTATGATGTAGCTATTTGGTTTGATATGCATTAACTAATGGTTGGATGTGAAGATCTGGCTACCAGAAGAAACTATTCATATTCAGCTCTAGGCCATCTTCATTTCTAACCTATTGACAGCATGTATCTATATTAAGCTTGTTCAAATAAAAATTTGTTATTATTAATGACTCTTCAATTATGGTCTTTTTAAGGCCTAATTTGT TGTGCATGTTCATGACTCTTCACGTTAACTTTGGTAACTGACATGTGAGTCTTACTTTCATCCACAAAACTCCTTTCTTCATACTCAACTCCAACTATTATAAATAACACCAAAGCCCCTCACTGAGCTTCTACAACCATTAGAGTTCCTTATTTCAATCAACACCCAAAAACCTAAGTCAAGTGTTCAAGTTCTTTCAGAAAAACCAAACATTTCCTTTCATTTGTCATTTGTCAAATGGCACCTCATGGAGAGGCTATTTCAAGGAGCAACAACTTCTCAAAGCCACCAAGGCTTTCATCCAATGGCCTCCAAAGAACAATCTCAGATATATCAATGGAATTGGGGAAGGAGTTGGCGATAACATCAGATACCAAACAAGTTGCACTTCCACCAATATCTGAGATTGAGGATGCACGATGTGAATGTTGTGGAATGTGCGAGGAGTACACACAAGAGTACATCGATCGAATGCGAGACAAGTTCCTTGGGAAGTGGATATGCGGGCTCTGCGCCGAGGCCGTGGAAGGCGAAGTGGAGAAGCACGGAGGGAGCAAAGAGGCAGCATTGAACTCGCACATGAGCGCCTGTGTAAGGTTTAACAAACTGGGGAGGGCTTATCCTGTGTTGTTTCAAGCTGAGGCAATGAGAGAGATGTTGAAGAAGAGTAGGATGGATGGGAGAGATGGTTTTAGGGCTAAGTCTTTGAGTCCTAGAGACAAAGCTGCAGTTCAAAAGAAGGGTGGGATTGCTAGGAGTTCAAGCTGCATTCCAGCCATCATTAGATCAGAGGATCTTAACAATCTCAAACTGCAAAACTAATTCATATTTTGCCTGAGATCTTCTAATTTTAGCCACTTTAACTATCCTTTATTTCCTCCATTCCTATTTCCCATCTTAACCTCTACTAAATTTCAGTTAACTTCCGTTGCTGTCTTTTGAATCTTCTTCAACACCTAGTTACATCACCTGGTTTGAACGGTAATTTTTTTCTAGGTGGGCTTCTTTATATTTTTGCTTCCCTTTCATGGGTTTTTTTTTTCTTTCTTTCTTTTTTCTGCAGTAAAAGAGTACCTTGAAGTTGGTATTTGTTTTATGATGTAGCTATTTGGTTTGATATGCATTAACTAATGGTTGGATGTGAAGATCTGGCTACCAGAAGAAACTATTCATATTCAGCTCTAGGCCATCTTCATTTCTAACCTATTGACAGCATGTATCTATATTAAGCTTGTTCAAATAAAAATTTGTTATTATTAATGACTCTTCAATTATGGTCTTTTTAAGGCCTAATTTGT ATGGCACCTCATGGAGAGGCTATTTCAAGGAGCAACAACTTCTCAAAGCCACCAAGGCTTTCATCCAATGGCCTCCAAAGAACAATCTCAGATATATCAATGGAATTGGGGAAGGAGTTGGCGATAACATCAGATACCAAACAAGTTGCACTTCCACCAATATCTGAGATTGAGGATGCACGATGTGAATGTTGTGGAATGTGCGAGGAGTACACACAAGAGTACATCGATCGAATGCGAGACAAGTTCCTTGGGAAGTGGATATGCGGGCTCTGCGCCGAGGCCGTGGAAGGCGAAGTGGAGAAGCACGGAGGGAGCAAAGAGGCAGCATTGAACTCGCACATGAGCGCCTGTGTAAGGTTTAACAAACTGGGGAGGGCTTATCCTGTGTTGTTTCAAGCTGAGGCAATGAGAGAGATGTTGAAGAAGAGTAGGATGGATGGGAGAGATGGTTTTAGGGCTAAGTCTTTGAGTCCTAGAGACAAAGCTGCAGTTCAAAAGAAGGGTGGGATTGCTAGGAGTTCAAGCTGCATTCCAGCCATCATTAGATCAGAGGATCTTAACAATCTCAAACTGCAAAACTAA MAPHGEAISRSNNFSKPPRLSSNGLQRTISDISMELGKELAITSDTKQVALPPISEIEDARCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNSHMSACVRFNKLGRAYPVLFQAEAMREMLKKSRMDGRDGFRAKSLSPRDKAAVQKKGGIARSSSCIPAIIRSEDLNNLKLQN Homology
BLAST of Clc09G00110 vs. NCBI nr
Match: XP_038898439.1 (uncharacterized protein LOC120086077 [Benincasa hispida]) HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102 Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Clc09G00110 vs. NCBI nr
Match: XP_011659684.1 (uncharacterized protein LOC105436220 [Cucumis sativus]) HSP 1 Score: 382.1 bits (980), Expect = 2.8e-102 Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Clc09G00110 vs. NCBI nr
Match: KAE8646534.1 (hypothetical protein Csa_016674 [Cucumis sativus]) HSP 1 Score: 382.1 bits (980), Expect = 2.8e-102 Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Clc09G00110 vs. NCBI nr
Match: KAA0051038.1 (uncharacterized protein E6C27_scaffold481G00160 [Cucumis melo var. makuwa] >TYK03833.1 uncharacterized protein E5676_scaffold347G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100 Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of Clc09G00110 vs. NCBI nr
Match: XP_008462438.1 (PREDICTED: uncharacterized protein LOC103500786 [Cucumis melo]) HSP 1 Score: 374.8 bits (961), Expect = 4.5e-100 Identity = 187/194 (96.39%), Postives = 188/194 (96.91%), Query Frame = 0
BLAST of Clc09G00110 vs. ExPASy TrEMBL
Match: A0A0A0K9S5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452930 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102 Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Clc09G00110 vs. ExPASy TrEMBL
Match: A0A5D3BVT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00250 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 5.8e-101 Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0
BLAST of Clc09G00110 vs. ExPASy TrEMBL
Match: A0A1S3CGX8 (uncharacterized protein LOC103500786 OS=Cucumis melo OX=3656 GN=LOC103500786 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100 Identity = 187/194 (96.39%), Postives = 188/194 (96.91%), Query Frame = 0
BLAST of Clc09G00110 vs. ExPASy TrEMBL
Match: A0A6J1D0Q4 (uncharacterized protein LOC111016511 OS=Momordica charantia OX=3673 GN=LOC111016511 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 6.2e-95 Identity = 176/194 (90.72%), Postives = 183/194 (94.33%), Query Frame = 0
BLAST of Clc09G00110 vs. ExPASy TrEMBL
Match: A0A6J1KMI4 (uncharacterized protein LOC111494656 OS=Cucurbita maxima OX=3661 GN=LOC111494656 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.8e-94 Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0
BLAST of Clc09G00110 vs. TAIR 10
Match: AT5G25840.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 158.7 bits (400), Expect = 4.8e-39 Identity = 89/173 (51.45%), Postives = 115/173 (66.47%), Query Frame = 0
BLAST of Clc09G00110 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 158.3 bits (399), Expect = 6.2e-39 Identity = 93/191 (48.69%), Postives = 121/191 (63.35%), Query Frame = 0
BLAST of Clc09G00110 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 91.3 bits (225), Expect = 9.4e-19 Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of Clc09G00110 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 81.6 bits (200), Expect = 7.4e-16 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of Clc09G00110 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 78.2 bits (191), Expect = 8.2e-15 Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|