Clc08G18250 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G18250
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionsufE-like protein 2, chloroplastic
LocationClcChr08: 28325960 .. 28327263 (+)
RNA-Seq ExpressionClc08G18250
SyntenyClc08G18250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGGGCAGCGAGGAGGTGAATTATGGGGTAGATGGACCCGGTAAGGAGAGGAGCAGTGCCAGACAGTGGGGGTGGAATTCGAGGATCTTATTTTTACTTGCTCAAACATGGCTACCCTCGTTTTCAATCCCCCTCTATTTTCTAAAATTTGCGAGTTTCTTGCTCTTTCTTCCTTTAATTTCCATCCAAACATGTCTTCAGTCCCTATAATTACTTCTTCTGGAATTGGCTTCCCTCAGTGTTCAGGTTCCTCGAAGCTCTGTCTTCAACAAATTCGGTCTCGTCATGTGGTGAACCGCAGATTTGTGGCGTCCAAATCTGTGAGATGTACCATATCTCGTGAACTTAATCTCACTTCCTCTAACAAATTAGGTAGTCGACGCCCTAACTGCGATCTCGATTCGATTGCAATTCCGGTTTATACGTCTGAATTAGTGGCTGATAGGCTCCATGGGCTTGTTTTGGAATTCGAGTCTCTGTTGGAGCCGATTGATCGGGTTAAACGACTATTGCATTACGCAGCGATTCTTGACCCTTCGGACGAATCGATTCGAGTTCCGGAGAATCGAGTGAGGGGATGCGCAACGCAGGTGTGGTTGGATGTGAAAATAGACGAGTTGGATCGAATGAGATTTAAAGCGGATAGCGATTCGGAGATAGCGAAGGGATATTGTTCGTGTTTGATCTGGATGCTGGAAGGTGCGGAGGCATGGGAGGTTTTGAAGGTGAGGAGCGATGATTTGGAGGCTGTGAATGTTGGATTGCACGGAAAAGCGACGTCTAGGGTGAATACATGGCAAAATGTGTTGATGAGTATGCAAATAAGGACCAAGAGTTTGATCTCCGGGAGTGCAGGGAAGCCGCAATTGGAGCCTTTAATCTTCCGTGCTGTTCATCATCGCTGATTGGGTAAGCGCCATCATTAAAAATTTAAAAAGCAGCAGACTAAAATTAATTAATCAATTCTATATTTGTGTAGCCTGCAATATTCACCACACCAACACTATTTGATTGTAACATCTAATTATATGATTTATTGAGTTACCAAATTTGTTAATAATCTGTTAATACTATGTTACTGGGTTATTATAAATACCCTTGGATGAGAATTGAAAATCTATTTCACAGTTTCGGTATCCGAGTTAGAATCTATCAAATAGTATAGTTTCCATCTCTAAACCAATCGGATCTCAACAAACTTGCGTCTTCTCTCGTTCTACTTTTTCATCCGTGGCTTCGGTACTTGAACATCCATCCTATTCGAAACAACTTCAATCTCTTCTATGGCTAACGAGGGCAAGGAA

mRNA sequence

ACGGGCAGCGAGGAGGTGAATTATGGGGTAGATGGACCCGGTAAGGAGAGGAGCAGTGCCAGACAGTGGGGGTGGAATTCGAGGATCTTATTTTTACTTGCTCAAACATGGCTACCCTCGTTTTCAATCCCCCTCTATTTTCTAAAATTTGCGAGTTTCTTGCTCTTTCTTCCTTTAATTTCCATCCAAACATGTCTTCAGTCCCTATAATTACTTCTTCTGGAATTGGCTTCCCTCAGTGTTCAGGTTCCTCGAAGCTCTGTCTTCAACAAATTCGGTCTCGTCATGTGGTGAACCGCAGATTTGTGGCGTCCAAATCTGTGAGATGTACCATATCTCGTGAACTTAATCTCACTTCCTCTAACAAATTAGGTAGTCGACGCCCTAACTGCGATCTCGATTCGATTGCAATTCCGGTTTATACGTCTGAATTAGTGGCTGATAGGCTCCATGGGCTTGTTTTGGAATTCGAGTCTCTGTTGGAGCCGATTGATCGGGTTAAACGACTATTGCATTACGCAGCGATTCTTGACCCTTCGGACGAATCGATTCGAGTTCCGGAGAATCGAGTGAGGGGATGCGCAACGCAGGTGTGGTTGGATGTGAAAATAGACGAGTTGGATCGAATGAGATTTAAAGCGGATAGCGATTCGGAGATAGCGAAGGGATATTGTTCGTGTTTGATCTGGATGCTGGAAGGTGCGGAGGCATGGGAGGTTTTGAAGGTGAGGAGCGATGATTTGGAGGCTGTGAATGTTGGATTGCACGGAAAAGCGACGTCTAGGGTGAATACATGGCAAAATGTGTTGATGAGTATGCAAATAAGGACCAAGAGTTTGATCTCCGGGAGTGCAGGGAAGCCGCAATTGGAGCCTTTAATCTTCCGTGCTGTTCATCATCGCTGATTGGGTAAGCGCCATCATTAAAAATTTAAAAAGCAGCAGACTAAAATTAATTAATCAATTCTATATTTGTGTAGCCTGCAATATTCACCACACCAACACTATTTGATTGTAACATCTAATTATATGATTTATTGAGTTACCAAATTTGTTAATAATCTGTTAATACTATGTTACTGGGTTATTATAAATACCCTTGGATGAGAATTGAAAATCTATTTCACAGTTTCGGTATCCGAGTTAGAATCTATCAAATAGTATAGTTTCCATCTCTAAACCAATCGGATCTCAACAAACTTGCGTCTTCTCTCGTTCTACTTTTTCATCCGTGGCTTCGGTACTTGAACATCCATCCTATTCGAAACAACTTCAATCTCTTCTATGGCTAACGAGGGCAAGGAA

Coding sequence (CDS)

ATGGCTACCCTCGTTTTCAATCCCCCTCTATTTTCTAAAATTTGCGAGTTTCTTGCTCTTTCTTCCTTTAATTTCCATCCAAACATGTCTTCAGTCCCTATAATTACTTCTTCTGGAATTGGCTTCCCTCAGTGTTCAGGTTCCTCGAAGCTCTGTCTTCAACAAATTCGGTCTCGTCATGTGGTGAACCGCAGATTTGTGGCGTCCAAATCTGTGAGATGTACCATATCTCGTGAACTTAATCTCACTTCCTCTAACAAATTAGGTAGTCGACGCCCTAACTGCGATCTCGATTCGATTGCAATTCCGGTTTATACGTCTGAATTAGTGGCTGATAGGCTCCATGGGCTTGTTTTGGAATTCGAGTCTCTGTTGGAGCCGATTGATCGGGTTAAACGACTATTGCATTACGCAGCGATTCTTGACCCTTCGGACGAATCGATTCGAGTTCCGGAGAATCGAGTGAGGGGATGCGCAACGCAGGTGTGGTTGGATGTGAAAATAGACGAGTTGGATCGAATGAGATTTAAAGCGGATAGCGATTCGGAGATAGCGAAGGGATATTGTTCGTGTTTGATCTGGATGCTGGAAGGTGCGGAGGCATGGGAGGTTTTGAAGGTGAGGAGCGATGATTTGGAGGCTGTGAATGTTGGATTGCACGGAAAAGCGACGTCTAGGGTGAATACATGGCAAAATGTGTTGATGAGTATGCAAATAAGGACCAAGAGTTTGATCTCCGGGAGTGCAGGGAAGCCGCAATTGGAGCCTTTAATCTTCCGTGCTGTTCATCATCGCTGA

Protein sequence

MATLVFNPPLFSKICEFLALSSFNFHPNMSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKLGSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR
Homology
BLAST of Clc08G18250 vs. NCBI nr
Match: XP_038886328.1 (sufE-like protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-123
Identity = 225/265 (84.91%), Postives = 238/265 (89.81%), Query Frame = 0

Query: 1   MATLVFNPPLFSKICEFLALSSFNFHPNMSSVPIITSSGIGFPQCSGSSKLCLQQIRSRH 60
           MAT VFNP LFSK CEF A  S +FHPNMSS+P+ITSSGIGF + SGSS LCLQQI S H
Sbjct: 1   MATFVFNPLLFSKFCEFFAPPSISFHPNMSSIPMITSSGIGFAKFSGSSNLCLQQIPSPH 60

Query: 61  VVNRRFVASKSVRCTISRELNLTSSNKLGSRRPNCDLDSIAIPVYTSELVADRLHGLVLE 120
           ++NRRFVASKSV CTIS +LNLTSSNKL +RRPNCDLDSIAIP+YTSELVADRLH LVLE
Sbjct: 61  MLNRRFVASKSVTCTISHDLNLTSSNKLCTRRPNCDLDSIAIPLYTSELVADRLHRLVLE 120

Query: 121 FESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVKIDELDRMRFKADS 180
           FESLLEPIDRVKRLLHYAAILDPSDESIR+PENRVRGCATQVWLDVKIDE DRMRFKADS
Sbjct: 121 FESLLEPIDRVKRLLHYAAILDPSDESIRLPENRVRGCATQVWLDVKIDEFDRMRFKADS 180

Query: 181 DSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGKATSRVNTWQNVLMSMQIR 240
           DSEIAKGYCSCLIWMLEGAE WEVLKVRSDDLEAVNVGLHGKA SRVNTWQNVLMSMQ+R
Sbjct: 181 DSEIAKGYCSCLIWMLEGAEPWEVLKVRSDDLEAVNVGLHGKAASRVNTWQNVLMSMQMR 240

Query: 241 TKSLISGSAGKPQLEPLIFRAVHHR 266
           TK+L+S    KP LEP  FR VHHR
Sbjct: 241 TKTLVSKIEAKPPLEPFTFRTVHHR 265

BLAST of Clc08G18250 vs. NCBI nr
Match: KAA0061053.1 (sufE-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 383.6 bits (984), Expect = 1.3e-102
Identity = 193/237 (81.43%), Postives = 205/237 (86.50%), Query Frame = 0

Query: 29  MSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 88
           MSS+P+I SS I F   SGSSKL  QQ RS HVVNRRF ASKSVRC IS +LNLTSSNKL
Sbjct: 1   MSSIPMIASSRIAFSDFSGSSKLHFQQFRSPHVVNRRFAASKSVRCAISHDLNLTSSNKL 60

Query: 89  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 148
            S RPNCDLDSIAIPVY+SELVAD+L  LVLEFESLLEPIDRVKRLLHYAAIL  SD++I
Sbjct: 61  CSPRPNCDLDSIAIPVYSSELVADKLRRLVLEFESLLEPIDRVKRLLHYAAILGSSDKAI 120

Query: 149 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 208
           R+PENRVRGCA QVWLDVKIDE DRMRFKADSDSEIAKGYCSCLIWMLEGAE WEVL VR
Sbjct: 121 RIPENRVRGCAAQVWLDVKIDEFDRMRFKADSDSEIAKGYCSCLIWMLEGAEPWEVLNVR 180

Query: 209 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDLEAVNVGLHGKATSRVNTWQNVLMSMQ+RT +L+S +  KP LEP  FR VH R
Sbjct: 181 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQMRTNTLVSKTEVKPLLEPFTFRTVHRR 237

BLAST of Clc08G18250 vs. NCBI nr
Match: XP_008444379.1 (PREDICTED: sufE-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 2.8e-100
Identity = 192/237 (81.01%), Postives = 202/237 (85.23%), Query Frame = 0

Query: 29  MSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 88
           MSS+P+I SS I F   SGSSKL  QQ RS HVVNRRF ASKSVRC IS +LNLTSSNKL
Sbjct: 1   MSSIPMIASSRIAFSDFSGSSKLHFQQFRSPHVVNRRFAASKSVRCAISHDLNLTSSNKL 60

Query: 89  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 148
            S RPNCDLDSIAIPVY+SELVAD+L  LVLEFESLLEPIDRVKRLLHYAAIL  SD++I
Sbjct: 61  CSPRPNCDLDSIAIPVYSSELVADKLRRLVLEFESLLEPIDRVKRLLHYAAILGSSDKAI 120

Query: 149 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 208
           R+PENRVRGCA QVWLDVKIDE DRMRFKADSDSEIAKGYCSCLIWMLEGAE WEVL VR
Sbjct: 121 RIPENRVRGCAAQVWLDVKIDEFDRMRFKADSDSEIAKGYCSCLIWMLEGAEPWEVLNVR 180

Query: 209 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDLEAVNVGLHGKATSRVNTWQNVLMSMQ+RT +L      KP LEP  FR VH R
Sbjct: 181 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQMRTNTL------KPPLEPFTFRTVHRR 231

BLAST of Clc08G18250 vs. NCBI nr
Match: XP_022131476.1 (sufE-like protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-99
Identity = 186/237 (78.48%), Postives = 205/237 (86.50%), Query Frame = 0

Query: 29  MSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 88
           MSS+PIITS G GF + S SSKL  ++IR R V N RF+ASKSVRC IS +LN+TSSNKL
Sbjct: 1   MSSIPIITSCGFGFAEFSDSSKLSFERIRFRQVENTRFLASKSVRCAISHDLNVTSSNKL 60

Query: 89  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 148
            SRRP CDLD+I IPVY SELVAD++H LVLEFESLLEPIDRVKRLLHYAAILDPSDESI
Sbjct: 61  CSRRPKCDLDAITIPVYASELVADKIHRLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 120

Query: 149 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 208
           R+PENRV+GC TQVWLDVKIDE +RMRFKADSDSEIAKGYCSCLIWML+GAE  EVLKVR
Sbjct: 121 RLPENRVKGCXTQVWLDVKIDEFERMRFKADSDSEIAKGYCSCLIWMLDGAEPLEVLKVR 180

Query: 209 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDL+AVNVGLHGKA SRVNTWQNV+MSMQ+RT +L+S S  KP LEP I   VHHR
Sbjct: 181 SDDLDAVNVGLHGKAISRVNTWQNVMMSMQMRTNALVSRSEPKPPLEPFII-TVHHR 236

BLAST of Clc08G18250 vs. NCBI nr
Match: XP_004143058.1 (sufE-like protein 2, chloroplastic [Cucumis sativus] >KGN62329.1 hypothetical protein Csa_018584 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-89
Identity = 176/237 (74.26%), Postives = 190/237 (80.17%), Query Frame = 0

Query: 30  SSVPIITSSGIG-FPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 89
           S +P+  SS +G FPQ S SS L  QQ R   ++NR   AS      IS  LNLTSSNKL
Sbjct: 3   SIIPVTASSPLGFFPQFSASSNLHFQQFRFPRLLNRTLAAS------ISHHLNLTSSNKL 62

Query: 90  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 149
            S RPNCDL SIA+PVYTSE VAD+L  LVLEFESLLEPIDRVKRLLHYAAILD SDE+I
Sbjct: 63  CSPRPNCDLHSIALPVYTSESVADKLRRLVLEFESLLEPIDRVKRLLHYAAILDSSDEAI 122

Query: 150 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 209
           R+PENRV+GCA QVWLDV +DE  RMRFKADSDSEIAKGYCSCLIWMLEGAE WEVLKVR
Sbjct: 123 RLPENRVKGCAAQVWLDVNVDEFGRMRFKADSDSEIAKGYCSCLIWMLEGAEPWEVLKVR 182

Query: 210 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDLEAVNVGLHGKATSRVNTWQNVLMSMQ+RT +L+S S  KP LEP   R VH R
Sbjct: 183 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQMRTNTLVSNSEMKPPLEPFTSRTVHRR 233

BLAST of Clc08G18250 vs. ExPASy Swiss-Prot
Match: Q9FXE3 (SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SUFE2 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.1e-50
Identity = 109/210 (51.90%), Postives = 139/210 (66.19%), Query Frame = 0

Query: 63  NRRFV---ASKSVRCTISRELNLTSSNKLGSRRPNCDLDSIAIPVYTSELVADRLHGLVL 122
           N RF    + K + C +   LNL S+ K  S      L ++++        +D+L  LV 
Sbjct: 28  NPRFTSRFSPKPITC-MRDSLNLGSNPKAPS---PFSLATVSVDAPLGTKTSDKLRILVS 87

Query: 123 EFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVKIDELDRMRFKAD 182
           EF SL EPIDRVKRLL+YAA L P DES R+ ENRV GC TQVWL++K+DE  RMRFKAD
Sbjct: 88  EFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKAD 147

Query: 183 SDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGKATSRVNTWQNVLMSMQI 242
           SDSEI+KG+CSCLIW+L+GA+  EV+ VRS+DL  +NVG+HGK  SRVNTW NVLMSMQ 
Sbjct: 148 SDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVLMSMQK 207

Query: 243 RTKSLISGSAG------KPQLEPLIFRAVH 264
           RT +L++           P    L+F+ V+
Sbjct: 208 RTMTLVATDVAHQRGQRPPHQHDLLFKYVN 233

BLAST of Clc08G18250 vs. ExPASy Swiss-Prot
Match: Q9FGS4 (Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QS PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-37
Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 0

Query: 106 TSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLD 165
           T+ELV  +L  LV EF+SL EPIDR+K +LHYA++L    ES +   NRV GC  +VWLD
Sbjct: 80  TTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKTESNRVMGCTARVWLD 139

Query: 166 VKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGKATS 225
            ++ +  +MRF ADSDS+++KG CSCLI +L+ A   EV++++++DL  +NVGL G   S
Sbjct: 140 AELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTEDLAELNVGLLGGERS 199

Query: 226 RVNTWQNVLMSMQIRTKSLISGSAGK-PQLEP 257
           RVNTW NVL+SMQ +T+ L++   GK P  EP
Sbjct: 200 RVNTWYNVLVSMQKKTRRLVAEREGKVPSFEP 231

BLAST of Clc08G18250 vs. ExPASy Swiss-Prot
Match: Q2QTL0 (Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0290150 PE=3 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 66/145 (45.52%), Postives = 84/145 (57.93%), Query Frame = 0

Query: 113 RLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVKIDELD 172
           R+  L  EF    +  DR +RLL  AA L    E+ RV  NRV GC  QVWL  + D   
Sbjct: 69  RVSRLAEEFRVSPDAADRARRLLARAAALPRLGEADRVAANRVMGCVAQVWLVGRCDGAG 128

Query: 173 RMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGK-ATSRVNTWQ 232
           RMRF ADSDSE+++GYC+CL+  L+GA   EVL V   DL  +     G  A SR +TW 
Sbjct: 129 RMRFAADSDSELSRGYCACLVSALDGARPEEVLDVDPADLAPLGGAAAGTGARSRASTWH 188

Query: 233 NVLMSMQIRTKSLISGSAGKPQLEP 257
           NVL+ MQ R ++ I+   G+P  EP
Sbjct: 189 NVLIGMQKRARAAIAAREGRPAGEP 213

BLAST of Clc08G18250 vs. ExPASy Swiss-Prot
Match: Q84W65 (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0

Query: 108 ELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVK 167
           E +  +L  +V  F+S+ EP  + ++L+ Y   L P D   +  EN+V GC +QVW+   
Sbjct: 81  EELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAF 140

Query: 168 IDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGL-HGKATSR 227
            DE   + ++ADSDS + KG  + L+  L G    E+L++  D   AV +GL    + SR
Sbjct: 141 FDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPD--FAVLLGLQQSLSPSR 200

Query: 228 VNTWQNVLMSMQ 239
            N   N+L  MQ
Sbjct: 201 NNGLLNMLKLMQ 210

BLAST of Clc08G18250 vs. ExPASy Swiss-Prot
Match: P74523 (Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1419 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11
Identity = 43/145 (29.66%), Postives = 77/145 (53.10%), Query Frame = 0

Query: 99  SIAIP--VYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVR 158
           SI  P  V  +  +   L  +V  F+   +P  R ++LL Y   L+P  E  ++  N+V+
Sbjct: 5   SIIFPNLVMANATLPPNLAKIVERFQRHTDPKKRYEQLLWYGKKLEPMMEEGKIAANKVQ 64

Query: 159 GCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVN 218
           GC +QV++   +++  ++ ++ DSD+++ KG  + LI  L G    E++++  D +EA  
Sbjct: 65  GCVSQVYITADLED-GKVMYQGDSDAQLVKGLVALLIQGLNGLTPTEIVELTPDFIEA-- 124

Query: 219 VGLHGKAT-SRVNTWQNVLMSMQIR 241
            GL    T SR N + N+   MQ +
Sbjct: 125 TGLQVSLTPSRANGFYNIFKMMQTK 146

BLAST of Clc08G18250 vs. ExPASy TrEMBL
Match: A0A5A7UYK2 (SufE-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001910 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 6.5e-103
Identity = 193/237 (81.43%), Postives = 205/237 (86.50%), Query Frame = 0

Query: 29  MSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 88
           MSS+P+I SS I F   SGSSKL  QQ RS HVVNRRF ASKSVRC IS +LNLTSSNKL
Sbjct: 1   MSSIPMIASSRIAFSDFSGSSKLHFQQFRSPHVVNRRFAASKSVRCAISHDLNLTSSNKL 60

Query: 89  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 148
            S RPNCDLDSIAIPVY+SELVAD+L  LVLEFESLLEPIDRVKRLLHYAAIL  SD++I
Sbjct: 61  CSPRPNCDLDSIAIPVYSSELVADKLRRLVLEFESLLEPIDRVKRLLHYAAILGSSDKAI 120

Query: 149 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 208
           R+PENRVRGCA QVWLDVKIDE DRMRFKADSDSEIAKGYCSCLIWMLEGAE WEVL VR
Sbjct: 121 RIPENRVRGCAAQVWLDVKIDEFDRMRFKADSDSEIAKGYCSCLIWMLEGAEPWEVLNVR 180

Query: 209 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDLEAVNVGLHGKATSRVNTWQNVLMSMQ+RT +L+S +  KP LEP  FR VH R
Sbjct: 181 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQMRTNTLVSKTEVKPLLEPFTFRTVHRR 237

BLAST of Clc08G18250 vs. ExPASy TrEMBL
Match: A0A1S3BAY5 (sufE-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487725 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.4e-100
Identity = 192/237 (81.01%), Postives = 202/237 (85.23%), Query Frame = 0

Query: 29  MSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 88
           MSS+P+I SS I F   SGSSKL  QQ RS HVVNRRF ASKSVRC IS +LNLTSSNKL
Sbjct: 1   MSSIPMIASSRIAFSDFSGSSKLHFQQFRSPHVVNRRFAASKSVRCAISHDLNLTSSNKL 60

Query: 89  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 148
            S RPNCDLDSIAIPVY+SELVAD+L  LVLEFESLLEPIDRVKRLLHYAAIL  SD++I
Sbjct: 61  CSPRPNCDLDSIAIPVYSSELVADKLRRLVLEFESLLEPIDRVKRLLHYAAILGSSDKAI 120

Query: 149 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 208
           R+PENRVRGCA QVWLDVKIDE DRMRFKADSDSEIAKGYCSCLIWMLEGAE WEVL VR
Sbjct: 121 RIPENRVRGCAAQVWLDVKIDEFDRMRFKADSDSEIAKGYCSCLIWMLEGAEPWEVLNVR 180

Query: 209 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDLEAVNVGLHGKATSRVNTWQNVLMSMQ+RT +L      KP LEP  FR VH R
Sbjct: 181 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQMRTNTL------KPPLEPFTFRTVHRR 231

BLAST of Clc08G18250 vs. ExPASy TrEMBL
Match: A0A6J1BPL7 (sufE-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004673 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.5e-99
Identity = 186/237 (78.48%), Postives = 205/237 (86.50%), Query Frame = 0

Query: 29  MSSVPIITSSGIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 88
           MSS+PIITS G GF + S SSKL  ++IR R V N RF+ASKSVRC IS +LN+TSSNKL
Sbjct: 1   MSSIPIITSCGFGFAEFSDSSKLSFERIRFRQVENTRFLASKSVRCAISHDLNVTSSNKL 60

Query: 89  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 148
            SRRP CDLD+I IPVY SELVAD++H LVLEFESLLEPIDRVKRLLHYAAILDPSDESI
Sbjct: 61  CSRRPKCDLDAITIPVYASELVADKIHRLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 120

Query: 149 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 208
           R+PENRV+GC TQVWLDVKIDE +RMRFKADSDSEIAKGYCSCLIWML+GAE  EVLKVR
Sbjct: 121 RLPENRVKGCXTQVWLDVKIDEFERMRFKADSDSEIAKGYCSCLIWMLDGAEPLEVLKVR 180

Query: 209 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDL+AVNVGLHGKA SRVNTWQNV+MSMQ+RT +L+S S  KP LEP I   VHHR
Sbjct: 181 SDDLDAVNVGLHGKAISRVNTWQNVMMSMQMRTNALVSRSEPKPPLEPFII-TVHHR 236

BLAST of Clc08G18250 vs. ExPASy TrEMBL
Match: A0A0A0LMT7 (SufE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G349630 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 6.3e-90
Identity = 176/237 (74.26%), Postives = 190/237 (80.17%), Query Frame = 0

Query: 30  SSVPIITSSGIG-FPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSNKL 89
           S +P+  SS +G FPQ S SS L  QQ R   ++NR   AS      IS  LNLTSSNKL
Sbjct: 3   SIIPVTASSPLGFFPQFSASSNLHFQQFRFPRLLNRTLAAS------ISHHLNLTSSNKL 62

Query: 90  GSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESI 149
            S RPNCDL SIA+PVYTSE VAD+L  LVLEFESLLEPIDRVKRLLHYAAILD SDE+I
Sbjct: 63  CSPRPNCDLHSIALPVYTSESVADKLRRLVLEFESLLEPIDRVKRLLHYAAILDSSDEAI 122

Query: 150 RVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVR 209
           R+PENRV+GCA QVWLDV +DE  RMRFKADSDSEIAKGYCSCLIWMLEGAE WEVLKVR
Sbjct: 123 RLPENRVKGCAAQVWLDVNVDEFGRMRFKADSDSEIAKGYCSCLIWMLEGAEPWEVLKVR 182

Query: 210 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLISGSAGKPQLEPLIFRAVHHR 266
           SDDLEAVNVGLHGKATSRVNTWQNVLMSMQ+RT +L+S S  KP LEP   R VH R
Sbjct: 183 SDDLEAVNVGLHGKATSRVNTWQNVLMSMQMRTNTLVSNSEMKPPLEPFTSRTVHRR 233

BLAST of Clc08G18250 vs. ExPASy TrEMBL
Match: A0A6J1GIN9 (sufE-like protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454514 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.6e-85
Identity = 169/220 (76.82%), Postives = 192/220 (87.27%), Query Frame = 0

Query: 29  MSSVPIITSS--GIGFPQCSGSSKLCLQQIRSRHVVNRRFVASKSVRCTISRELNLTSSN 88
           M+S+PI+T S    GF   SGSSKL LQ++RSR+VVN+RF+ASKS+RCTIS      SS+
Sbjct: 1   MASMPIVTFSFRSAGF---SGSSKLHLQKMRSRYVVNQRFLASKSLRCTIS------SSD 60

Query: 89  KLGSRRPNCDLDSIAIPVYTSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDE 148
           +L  RR NCDLD+ AIPVYTS+LV D+LH LVLEF+ LL+PIDRVKRLL YAAILDPS E
Sbjct: 61  RLHLRRSNCDLDAFAIPVYTSDLVVDKLHRLVLEFKPLLKPIDRVKRLLQYAAILDPSGE 120

Query: 149 SIRVPENRVRGCATQVWLDVKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLK 208
           SIR+PENRVRGCATQVWLDV+IDE DRMRFKADSDSEIAKGYCSCLIWMLEGA+A EVLK
Sbjct: 121 SIRLPENRVRGCATQVWLDVRIDEFDRMRFKADSDSEIAKGYCSCLIWMLEGAKACEVLK 180

Query: 209 VRSDDLEAVNVGLHGKATSRVNTWQNVLMSMQIRTKSLIS 247
           +RSDDLEAVNVGLHGKA SRVNTWQNVLMSMQ+RT +L+S
Sbjct: 181 MRSDDLEAVNVGLHGKAISRVNTWQNVLMSMQMRTNALVS 211

BLAST of Clc08G18250 vs. TAIR 10
Match: AT1G67810.1 (sulfur E2 )

HSP 1 Score: 199.1 bits (505), Expect = 4.4e-51
Identity = 109/210 (51.90%), Postives = 139/210 (66.19%), Query Frame = 0

Query: 63  NRRFV---ASKSVRCTISRELNLTSSNKLGSRRPNCDLDSIAIPVYTSELVADRLHGLVL 122
           N RF    + K + C +   LNL S+ K  S      L ++++        +D+L  LV 
Sbjct: 28  NPRFTSRFSPKPITC-MRDSLNLGSNPKAPS---PFSLATVSVDAPLGTKTSDKLRILVS 87

Query: 123 EFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVKIDELDRMRFKAD 182
           EF SL EPIDRVKRLL+YAA L P DES R+ ENRV GC TQVWL++K+DE  RMRFKAD
Sbjct: 88  EFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKAD 147

Query: 183 SDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGKATSRVNTWQNVLMSMQI 242
           SDSEI+KG+CSCLIW+L+GA+  EV+ VRS+DL  +NVG+HGK  SRVNTW NVLMSMQ 
Sbjct: 148 SDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVLMSMQK 207

Query: 243 RTKSLISGSAG------KPQLEPLIFRAVH 264
           RT +L++           P    L+F+ V+
Sbjct: 208 RTMTLVATDVAHQRGQRPPHQHDLLFKYVN 233

BLAST of Clc08G18250 vs. TAIR 10
Match: AT5G50210.1 (quinolinate synthase )

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-38
Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 0

Query: 106 TSELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLD 165
           T+ELV  +L  LV EF+SL EPIDR+K +LHYA++L    ES +   NRV GC  +VWLD
Sbjct: 80  TTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKTESNRVMGCTARVWLD 139

Query: 166 VKIDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGLHGKATS 225
            ++ +  +MRF ADSDS+++KG CSCLI +L+ A   EV++++++DL  +NVGL G   S
Sbjct: 140 AELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTEDLAELNVGLLGGERS 199

Query: 226 RVNTWQNVLMSMQIRTKSLISGSAGK-PQLEP 257
           RVNTW NVL+SMQ +T+ L++   GK P  EP
Sbjct: 200 RVNTWYNVLVSMQKKTRRLVAEREGKVPSFEP 231

BLAST of Clc08G18250 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E )

HSP 1 Score: 75.5 bits (184), Expect = 7.3e-14
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0

Query: 108 ELVADRLHGLVLEFESLLEPIDRVKRLLHYAAILDPSDESIRVPENRVRGCATQVWLDVK 167
           E +  +L  +V  F+S+ EP  + ++L+ Y   L P D   +  EN+V GC +QVW+   
Sbjct: 81  EELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAF 140

Query: 168 IDELDRMRFKADSDSEIAKGYCSCLIWMLEGAEAWEVLKVRSDDLEAVNVGL-HGKATSR 227
            DE   + ++ADSDS + KG  + L+  L G    E+L++  D   AV +GL    + SR
Sbjct: 141 FDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPD--FAVLLGLQQSLSPSR 200

Query: 228 VNTWQNVLMSMQ 239
            N   N+L  MQ
Sbjct: 201 NNGLLNMLKLMQ 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886328.11.1e-12384.91sufE-like protein 2, chloroplastic [Benincasa hispida][more]
KAA0061053.11.3e-10281.43sufE-like protein 2 [Cucumis melo var. makuwa][more]
XP_008444379.12.8e-10081.01PREDICTED: sufE-like protein 2, chloroplastic [Cucumis melo][more]
XP_022131476.13.1e-9978.48sufE-like protein 2, chloroplastic [Momordica charantia][more]
XP_004143058.11.3e-8974.26sufE-like protein 2, chloroplastic [Cucumis sativus] >KGN62329.1 hypothetical pr... [more]
Match NameE-valueIdentityDescription
Q9FXE36.1e-5051.90SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SUFE2 PE=2... [more]
Q9FGS42.0e-3751.32Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QS PE=1 S... [more]
Q2QTL01.4e-2545.52Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
Q84W651.0e-1234.85SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
P745239.6e-1129.66Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 ... [more]
Match NameE-valueIdentityDescription
A0A5A7UYK26.5e-10381.43SufE-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G... [more]
A0A1S3BAY51.4e-10081.01sufE-like protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487725 PE=4 ... [more]
A0A6J1BPL71.5e-9978.48sufE-like protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100467... [more]
A0A0A0LMT76.3e-9074.26SufE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G349630 PE=4 S... [more]
A0A6J1GIN91.6e-8576.82sufE-like protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454514... [more]
Match NameE-valueIdentityDescription
AT1G67810.14.4e-5151.90sulfur E2 [more]
AT5G50210.11.5e-3851.32quinolinate synthase [more]
AT4G26500.17.3e-1434.85chloroplast sulfur E [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1010.10coord: 104..242
e-value: 1.0E-35
score: 124.3
NoneNo IPR availablePANTHERPTHR43597:SF5SUFE-LIKE PROTEIN 2, CHLOROPLASTICcoord: 68..256
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 113..245
IPR003808Fe-S metabolism associated domain, SufE-likePFAMPF02657SufEcoord: 120..238
e-value: 2.9E-24
score: 85.2
IPR003808Fe-S metabolism associated domain, SufE-likePANTHERPTHR43597SULFUR ACCEPTOR PROTEIN CSDEcoord: 68..256

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G18250.1Clc08G18250.1mRNA