Clc08G17960 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G17960
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box protein SKIP14-like
Location	ClcChr08: 28158756 .. 28162062 (-)
RNA-Seq Expression	Clc08G17960
Synteny	Clc08G17960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTCCTTCTGTTTCTATTTCGTTTCTCACGTCTTTCACCTTTTTTCATAGTTTTTTCGGAGAATATTGGGAATTTAGGGTTATAGATTTAGGTTGGGGCAGGTAGGATCCTTGATGGCTCTTAACTTTTCTTGTCGTCCTTTCTTCCCTCTGCACCTTTCCGAGGATAATTTAGTTTCTCCAATGAGGATTGCCAATGGTTATATTGTGGAGGGCATTCCTGAGAATAATGCCGAAGGCAAGCCATGGCATCATGGCCGGGAGGTGGATGATTGTTTTGATCAGGGAAAGGATATTTGTTCAGATAGCTCGCAGGATCCTGTCTCTAAGGACATCCTTGATATTCTGCCTGCGGATCCATTTGGCATGGATATAAGTACCACCTTTACAGCAATAACGGGATGGCTTGAGGACATGGAAGTGGACTATGCTGAGTGTGTCAGCGACAGAGGTGGTGCTGGTGGAACGAATATCGAGTTATTTGCAGGTCTGAATTTTATTTGGAACAACGCTTTGAAGTTCCAAACGTTCCCTGAGGTTAAAAGTATTGTTGAGAAACCTTATCCGATGTATAACTGTGATGGTTGCCTGGATGGAAAGGTAACTGGCGATGTGACCTGCTGTTGTGATTTTGGATCCATTTGTAGTATGGATGAAGCGTTTTTTGCTAATGACGATCCTCCTAGCTGTTGCGGGCAGCAGGCTATAGAATGTCAGGAGCAGAATCGCACCTATTCGGAGATAGATGGAGGAGCCCCTCATGCAGCCGTAAGCTTTGCACTTTGTTATTTGGGTGTTCAGGATCTACTCTCTGTTGGAAGGGTTTGCAGATCTTTGCATTCATTGGTACAGGGTGACCCCCTTTTGTGGAGGAACATTCACATAGATCAACCATTGAATGAGAAGATCACTGATGACATTCTATTGCAATTAACTAATAGGGCTCGAGGTAACCTGCAACGCTTGAGTCTTGTGGAATGCCCAAGAATTACAGATGAGGGTCTGAAGCGTGTGCTTGAAAGCAATCCTAGGCTTACGAAAGTAAGTGTAACTTATTCCAGTTTTTGCTCTTCCATAATTAGTTGATTGTGTCTTGTTTGATTTTTTATTGCTATATTTGTTTGGTCATTTACATCGGGGTAATCGGTCTATTCTCCTTTATAGGCACTCAAATATGCTTCCTTGTTTAGTTCCTTGGTGCTTTTATATAAGCTTGATGTTATTAATCATCCTATGCTAGAGAGCCTTGTGCATACTTTTAACTTTCTGTTTTCTAGCCTTCGTTTGTAAATTTGAAGATTGTCCAAGTTTCGTAATGATATATTTTACAAACATAGATTTTTATTGATATCTTGAACAGTAATACAAATATTGGGATACATTTATTACTCGTTGATTTGGAAGTACTAATGCTACATTACTCTAGTTAGGATGTCTTATGCTAATAGTGACAAAGTAGCTCATGTTTAAGAAGCATAGACGCGTATGCACAGCAACTTACCATTTTTTAAAAATTAGAATATGGATATTATTGGGACATGTTCGACAGGGTGTTTCTTCGATGTGCGTTTGACCCCAACACTTGTGTCCAGCAGGGACACTATTTTGTGGGAAGTGTGAATATGCAATTTCTTTCCTAACACTGCATCATACTTACCACTTGCCAACTTGGCATGTTACTAAATATTTGTCTGTCTGCATGTTTATACAGTTGTCTGTTCCTGGATGTACTAGACTCAGTATTGAAGGCGTTGTTAGCAGCCTGAGGGCTTTCAAGTTGACAAGTACTCAAGGAATAAAGCATCTACGAATTGGTGGATTATTCGGGGTTACACAAGAACATTTCGAAGAGTTGAAGTTCTTATTGGGAAGTGACTGCAGCCTTACGCAGCAAAATTATTATAAGCCACATTATTATCACAGGGGAAACTTTTATGTGTCTTGTGATGATGAACGTGCTATTGATATTGAAAAATGTCCAAGATGCCAAAACCTGAGGCTTGTCTATGACTGCCCAGTGGATGGTTGTCAGGGAAAAGAGCATGCAACTCAAGCATGTAGAGCATGCACCCTTTGTATACCACGGTGTATCCAGTGCGGTAGATGCATTAATGAGAGTGAGTATGTGGAAACATTTAGCTTGGAATTGCTCTGCTCAGAATGCTGGAAGCCATCACTGAAGTGTCAAGAGAAACGGGATTGGAGGGAACAGGAAAATGGTTTTGTCCTCCATGCTAGAGGGGCACCGTGGACTGACTTCTAATTAATTCTTGGCATGGACGTGAGTTTCTCAATTGGCTTCATTTGAAAAAAAAACAAAAAAACAAGAAAAAGAAGAAAGAAAAGATAAAAAATAAAAAATAAAAAAAAAAGGAAAGAGAACTAGAATCATTCAAGTTTATGGTTCCTGTTATTTTAATCTAGAGCTCTAGAGTCAGCTTCCTTCAGGTTCTATTGCCATGCTAATCCTCCAGTGTTGAAGGGGAAAGCTTTAAGAGAATAAGTAGTAAGTGAGGTAATGAATAAGAAGAAGAATCTCTTATGCTGCAGAAGGCTTCTTACTATCATTGTTTGATGTACTGTGTATAGTTGATCAAGCTTGGATGATGATCTCTGTGTAGGATCTTCGTCGTGCTGTTGACATTGTGTGGATATTGGAATGCTCATCTCCATTAGTACCATTCTTACCTGGAGGCGAGAAGGGTCGAGATTCTTCAAAAGCGAGATGAGGATGTCTTTTTCTAGTAGTGTCTACCTACAAGGATGGGCTCTGTCCTGTGTAATTGGAAGGATATCATCTCATAATTATCTATGACTGTTTCTGTCTCTAGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTAGTATTCTTGTGATCGGTTTAGTCGGTATTTTCTTTTATGGTTCATATTCCGGAAGCTCGGCTCTAAGATTATGAAAAAGGAGAACACAAGCATGGTATCTGTTTAATGCGGGAAGTTTAGCGTCGCTGTTATAGCCCTGGTATCTTCATGAAAAAAGCTGCCGTTGGCCTGCCTGTGAGGTTCTTTGGCCATGTGCATTCTCAGGGTTTTGACCTATGTCATAGCTCGAATGTATGGGTGATCAGTCCCATGTCCTGTGCTTTATGGCGTCCATCAAAAGTTTGCTGTCTTCAACATTTTCTTGCATTCTCGTTTCTTCATCCAGCAGTACTTTTGCTTGTTCTCACTACCTGTGAACGGGGAATGAAATAA

mRNA sequence

TTTTTTTTTTTTTTTTTTCCTTCTGTTTCTATTTCGTTTCTCACGTCTTTCACCTTTTTTCATAGTTTTTTCGGAGAATATTGGGAATTTAGGGTTATAGATTTAGGTTGGGGCAGGTAGGATCCTTGATGGCTCTTAACTTTTCTTGTCGTCCTTTCTTCCCTCTGCACCTTTCCGAGGATAATTTAGTTTCTCCAATGAGGATTGCCAATGGTTATATTGTGGAGGGCATTCCTGAGAATAATGCCGAAGGCAAGCCATGGCATCATGGCCGGGAGGTGGATGATTGTTTTGATCAGGGAAAGGATATTTGTTCAGATAGCTCGCAGGATCCTGTCTCTAAGGACATCCTTGATATTCTGCCTGCGGATCCATTTGGCATGGATATAAGTACCACCTTTACAGCAATAACGGGATGGCTTGAGGACATGGAAGTGGACTATGCTGAGTGTGTCAGCGACAGAGGTGGTGCTGGTGGAACGAATATCGAGTTATTTGCAGGTCTGAATTTTATTTGGAACAACGCTTTGAAGTTCCAAACGTTCCCTGAGGTTAAAAGTATTGTTGAGAAACCTTATCCGATGTATAACTGTGATGGTTGCCTGGATGGAAAGGTAACTGGCGATGTGACCTGCTGTTGTGATTTTGGATCCATTTGTAGTATGGATGAAGCGTTTTTTGCTAATGACGATCCTCCTAGCTGTTGCGGGCAGCAGGCTATAGAATGTCAGGAGCAGAATCGCACCTATTCGGAGATAGATGGAGGAGCCCCTCATGCAGCCGTAAGCTTTGCACTTTGTTATTTGGGTGTTCAGGATCTACTCTCTGTTGGAAGGGTTTGCAGATCTTTGCATTCATTGGTACAGGGTGACCCCCTTTTGTGGAGGAACATTCACATAGATCAACCATTGAATGAGAAGATCACTGATGACATTCTATTGCAATTAACTAATAGGGCTCGAGGTAACCTGCAACGCTTGAGTCTTGTGGAATGCCCAAGAATTACAGATGAGGGTCTGAAGCGTGTGCTTGAAAGCAATCCTAGGCTTACGAAATTGTCTGTTCCTGGATGTACTAGACTCAGTATTGAAGGCGTTGTTAGCAGCCTGAGGGCTTTCAAGTTGACAAGTACTCAAGGAATAAAGCATCTACGAATTGGTGGATTATTCGGGGTTACACAAGAACATTTCGAAGAGTTGAAGTTCTTATTGGGAAGTGACTGCAGCCTTACGCAGCAAAATTATTATAAGCCACATTATTATCACAGGGGAAACTTTTATGTGTCTTGTGATGATGAACGTGCTATTGATATTGAAAAATGTCCAAGATGCCAAAACCTGAGGCTTGTCTATGACTGCCCAGTGGATGGTTGTCAGGGAAAAGAGCATGCAACTCAAGCATGTAGAGCATGCACCCTTTGTATACCACGGTGTATCCAGTGCGGTAGATGCATTAATGAGAGTGAGTATGTGGAAACATTTAGCTTGGAATTGCTCTGCTCAGAATGCTGGAAGCCATCACTGAAGTGTCAAGAGAAACGGGATTGGAGGGAACAGGAAAATGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTAGTATTCTTGTGATCGGTTTAGTCGCTGCCGTTGGCCTGCCTGTGAGGTTCTTTGGCCATGTGCATTCTCAGGGTTTTGACCTATGTCATAGCTCGAATGTATGGGTGATCAGTCCCATGTCCTGTGCTTTATGGCGTCCATCAAAAGTTTGCTGTCTTCAACATTTTCTTGCATTCTCGTTTCTTCATCCAGCAGTACTTTTGCTTGTTCTCACTACCTGTGAACGGGGAATGAAATAA

Coding sequence (CDS)

ATGGCTCTTAACTTTTCTTGTCGTCCTTTCTTCCCTCTGCACCTTTCCGAGGATAATTTAGTTTCTCCAATGAGGATTGCCAATGGTTATATTGTGGAGGGCATTCCTGAGAATAATGCCGAAGGCAAGCCATGGCATCATGGCCGGGAGGTGGATGATTGTTTTGATCAGGGAAAGGATATTTGTTCAGATAGCTCGCAGGATCCTGTCTCTAAGGACATCCTTGATATTCTGCCTGCGGATCCATTTGGCATGGATATAAGTACCACCTTTACAGCAATAACGGGATGGCTTGAGGACATGGAAGTGGACTATGCTGAGTGTGTCAGCGACAGAGGTGGTGCTGGTGGAACGAATATCGAGTTATTTGCAGGTCTGAATTTTATTTGGAACAACGCTTTGAAGTTCCAAACGTTCCCTGAGGTTAAAAGTATTGTTGAGAAACCTTATCCGATGTATAACTGTGATGGTTGCCTGGATGGAAAGGTAACTGGCGATGTGACCTGCTGTTGTGATTTTGGATCCATTTGTAGTATGGATGAAGCGTTTTTTGCTAATGACGATCCTCCTAGCTGTTGCGGGCAGCAGGCTATAGAATGTCAGGAGCAGAATCGCACCTATTCGGAGATAGATGGAGGAGCCCCTCATGCAGCCGTAAGCTTTGCACTTTGTTATTTGGGTGTTCAGGATCTACTCTCTGTTGGAAGGGTTTGCAGATCTTTGCATTCATTGGTACAGGGTGACCCCCTTTTGTGGAGGAACATTCACATAGATCAACCATTGAATGAGAAGATCACTGATGACATTCTATTGCAATTAACTAATAGGGCTCGAGGTAACCTGCAACGCTTGAGTCTTGTGGAATGCCCAAGAATTACAGATGAGGGTCTGAAGCGTGTGCTTGAAAGCAATCCTAGGCTTACGAAATTGTCTGTTCCTGGATGTACTAGACTCAGTATTGAAGGCGTTGTTAGCAGCCTGAGGGCTTTCAAGTTGACAAGTACTCAAGGAATAAAGCATCTACGAATTGGTGGATTATTCGGGGTTACACAAGAACATTTCGAAGAGTTGAAGTTCTTATTGGGAAGTGACTGCAGCCTTACGCAGCAAAATTATTATAAGCCACATTATTATCACAGGGGAAACTTTTATGTGTCTTGTGATGATGAACGTGCTATTGATATTGAAAAATGTCCAAGATGCCAAAACCTGAGGCTTGTCTATGACTGCCCAGTGGATGGTTGTCAGGGAAAAGAGCATGCAACTCAAGCATGTAGAGCATGCACCCTTTGTATACCACGGTGTATCCAGTGCGGTAGATGCATTAATGAGAGTGAGTATGTGGAAACATTTAGCTTGGAATTGCTCTGCTCAGAATGCTGGAAGCCATCACTGAAGTGTCAAGAGAAACGGGATTGGAGGGAACAGGAAAATGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTAGTATTCTTGTGATCGGTTTAGTCGCTGCCGTTGGCCTGCCTGTGAGGTTCTTTGGCCATGTGCATTCTCAGGGTTTTGACCTATGTCATAGCTCGAATGTATGGGTGATCAGTCCCATGTCCTGTGCTTTATGGCGTCCATCAAAAGTTTGCTGTCTTCAACATTTTCTTGCATTCTCGTTTCTTCATCCAGCAGTACTTTTGCTTGTTCTCACTACCTGTGAACGGGGAATGAAATAA

Protein sequence

MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAEGKPWHHGREVDDCFDQGKDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGAGGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLCSECWKPSLKCQEKRDWREQENARPLDEMGREVGQMAETTGRIPLWIIGTVTSILVIGLVAAVGLPVRFFGHVHSQGFDLCHSSNVWVISPMSCALWRPSKVCCLQHFLAFSFLHPAVLLLVLTTCERGMK

Homology

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BLAST of Clc08G17960 vs. NCBI nr
Match: XP_038884813.1 (F-box protein SKIP14 [Benincasa hispida])

HSP 1 Score: 916.0 bits (2366), Expect = 1.7e-262
Identity = 431/476 (90.55%), Postives = 446/476 (93.70%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           M LNFSCRPFFPLH SEDNLVSPMRIANGYIVEGIPENNAE  G PWH GREV  CFD G
Sbjct: 1   MTLNFSCRPFFPLHFSEDNLVSPMRIANGYIVEGIPENNAEGCGNPWHLGREVGACFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGAGGT 120
           KDICSDSSQDPVSKDILDILPADPFGMDIS+TFTAITGWLEDMEVDYAECV DRGGA  T
Sbjct: 61  KDICSDSSQDPVSKDILDILPADPFGMDISSTFTAITGWLEDMEVDYAECVRDRGGASET 120

Query: 121 NIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGSICS 180
           NIELFAGLNFIWNN LKFQ FPE+KSI +KPYPMY+CDGC DGKVTGDV+CCCDFGSICS
Sbjct: 121 NIELFAGLNFIWNNTLKFQKFPEIKSIDQKPYPMYSCDGCPDGKVTGDVSCCCDFGSICS 180

Query: 181 MDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLLSVGRVC 240
           MDEAF ANDDPPSC  QQ IECQEQN TYSEIDGG+PHAA+SFALCYLGVQDLLSVGRVC
Sbjct: 181 MDEAFLANDDPPSCGEQQDIECQEQNCTYSEIDGGSPHAALSFALCYLGVQDLLSVGRVC 240

Query: 241 RSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRITDEGLK 300
           RSLHS+V+GDPLLWRNI IDQPLNEKITDDILLQLTNRARGNLQ LSLVECPRITDEGLK
Sbjct: 241 RSLHSVVEGDPLLWRNIRIDQPLNEKITDDILLQLTNRARGNLQSLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQEHFEELK 360
            VLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQG+KHLRIGGL+GVTQEHFEELK
Sbjct: 301 HVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGVKHLRIGGLYGVTQEHFEELK 360

Query: 361 FLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420
            LLGSDC+LTQQN YKPH YHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK
Sbjct: 361 LLLGSDCNLTQQNSYKPHIYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLCSECWKPSLKCQEKRDWR 475
           EHATQAC+ CTLCIPRCIQCGRCINESEYVETF LELLCS+CWKP LKCQEK+DWR
Sbjct: 421 EHATQACKGCTLCIPRCIQCGRCINESEYVETFCLELLCSDCWKPLLKCQEKQDWR 476

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BLAST of Clc08G17960 vs. NCBI nr
Match: XP_004142948.1 (F-box protein SKIP14 [Cucumis sativus] >KGN62356.1 hypothetical protein Csa_018763 [Cucumis sativus])

HSP 1 Score: 884.4 bits (2284), Expect = 5.3e-253
Identity = 425/491 (86.56%), Postives = 444/491 (90.43%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAEG--KPWHHGREVDDCFDQG 60
           MALNFSCRP  PLHLSEDNLVSPMRIANGYIVEGIPENNAEG  KPWH GREVDDCFD G
Sbjct: 1   MALNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCRKPWHRGREVDDCFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDR------ 120
           KD CSDSSQDPVSKDIL ILPADPFGMDISTTFTAITGWLEDMEVDY EC S+R      
Sbjct: 61  KDSCSDSSQDPVSKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSNRAGTGAG 120

Query: 121 ----GGAGGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVT 180
                GAGG +IE FA +NFIWNNALKFQTFPE KS V+KPYP+Y+CD CLDGKVTGDV 
Sbjct: 121 AGAGAGAGGKDIEFFACMNFIWNNALKFQTFPETKSTVQKPYPIYSCDRCLDGKVTGDVA 180

Query: 181 CCCDFGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGV 240
           CCCDFGSICSMDEAFFANDD PSCCGQ  IECQEQN TY+EIDGGAPHAA+SFALCYLGV
Sbjct: 181 CCCDFGSICSMDEAFFANDDAPSCCGQLDIECQEQNYTYTEIDGGAPHAALSFALCYLGV 240

Query: 241 QDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVE 300
           QDLLSVGRVCRSLHS+VQ DPLLWRNIHI QPLNEKITD+ILLQLTNRARGNLQ LSLVE
Sbjct: 241 QDLLSVGRVCRSLHSVVQDDPLLWRNIHIGQPLNEKITDNILLQLTNRARGNLQCLSLVE 300

Query: 301 CPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFG 360
           CPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQG+KHLRIGGL+G
Sbjct: 301 CPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGVKHLRIGGLYG 360

Query: 361 VTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVY 420
           VTQEHFEEL FLLG D SLTQ+N YK H+Y RGNFYVSCDD+RA+DIEKCPRCQN R+VY
Sbjct: 361 VTQEHFEELNFLLGIDSSLTQKNSYKQHFYFRGNFYVSCDDKRAMDIEKCPRCQNPRIVY 420

Query: 421 DCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINE-SEYVETFSLELLCSECWKPSLKC 479
           DCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINE SEYVETFSLELLCS+CWKP L C
Sbjct: 421 DCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINESSEYVETFSLELLCSDCWKPLLTC 480

[Close]

BLAST of Clc08G17960 vs. NCBI nr
Match: XP_008444416.1 (PREDICTED: F-box protein SKIP14-like [Cucumis melo])

HSP 1 Score: 882.1 bits (2278), Expect = 2.7e-252
Identity = 423/487 (86.86%), Postives = 443/487 (90.97%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           M LNFSCRP  PLHLSEDNLVSPMRIANGYIVEGIPENNAE  GKPWH GREVD CFD G
Sbjct: 1   MTLNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCGKPWHRGREVDGCFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGA--- 120
           KD CSDSSQDPV KDIL ILPADPFGMDISTTFTAITGWLEDMEVDY EC S  GGA   
Sbjct: 61  KDSCSDSSQDPVCKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSSSGGAGTG 120

Query: 121 ---GGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCD 180
              GG +IE+FA LNFIWN+ALKFQTFPE KS V+KPYP+Y+CD CLDGKVTGDV CCCD
Sbjct: 121 AGSGGKDIEIFACLNFIWNSALKFQTFPETKSTVQKPYPIYSCDRCLDGKVTGDVACCCD 180

Query: 181 FGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLL 240
           FGSICSMDEAFFANDDPPS CGQ  IECQEQN TY+EIDGGAPHAA+SFAL YLGVQDLL
Sbjct: 181 FGSICSMDEAFFANDDPPSRCGQLDIECQEQNCTYTEIDGGAPHAALSFALSYLGVQDLL 240

Query: 241 SVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRI 300
           SVGRVCRSLHS+VQ DPLLWRNIHIDQPLNEKITD+ILLQLTNRARGNLQ LSLVECPRI
Sbjct: 241 SVGRVCRSLHSVVQDDPLLWRNIHIDQPLNEKITDNILLQLTNRARGNLQCLSLVECPRI 300

Query: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQE 360
           TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKL S+QG+KHLRIGGL+GVTQE
Sbjct: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLKSSQGVKHLRIGGLYGVTQE 360

Query: 361 HFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPV 420
           HFEEL FLLG DCSLTQ+N YK H+Y RGNFYVSCDD+RA+DIEKCPRCQN R++YDCPV
Sbjct: 361 HFEELNFLLGIDCSLTQKNSYKQHFYFRGNFYVSCDDKRAMDIEKCPRCQNPRIIYDCPV 420

Query: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINE-SEYVETFSLELLCSECWKPSLKCQEKR 479
           DGCQGKEHATQACRACTLCIPRCIQCGRCINE SEYVETFSLELLCS+CWKPSL CQEKR
Sbjct: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINESSEYVETFSLELLCSDCWKPSLTCQEKR 480

[Close]

BLAST of Clc08G17960 vs. NCBI nr
Match: KAA0061028.1 (F-box protein SKIP14-like [Cucumis melo var. makuwa])

HSP 1 Score: 881.7 bits (2277), Expect = 3.5e-252
Identity = 423/487 (86.86%), Postives = 443/487 (90.97%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           M LNFSCRP  PLHLSEDNLVSPMRIANGYIVEGIPENNAE  GKPWH GREVD CFD G
Sbjct: 1   MTLNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCGKPWHRGREVDGCFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGA--- 120
           KD CSDSSQDPV KDIL ILPADPFGMDISTTFTAITGWLEDMEVDY EC S  GGA   
Sbjct: 61  KDSCSDSSQDPVCKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSSSGGAGAG 120

Query: 121 ---GGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCD 180
              GG +IE+FA LNFIWN+ALKFQTFPE KS V+KPYP+Y+CD CLDGKVTGDV CCCD
Sbjct: 121 AGSGGKDIEIFACLNFIWNSALKFQTFPETKSTVQKPYPIYSCDRCLDGKVTGDVPCCCD 180

Query: 181 FGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLL 240
           FGSICSMDEAFFANDDPPS CGQ  IECQEQN TY+EIDGGAPHAA+SFAL YLGVQDLL
Sbjct: 181 FGSICSMDEAFFANDDPPSRCGQLDIECQEQNCTYTEIDGGAPHAALSFALSYLGVQDLL 240

Query: 241 SVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRI 300
           SVGRVCRSLHS+VQ DPLLWRNIHIDQPLNEKITD+ILLQLTNRARGNLQ LSLVECPRI
Sbjct: 241 SVGRVCRSLHSVVQDDPLLWRNIHIDQPLNEKITDNILLQLTNRARGNLQCLSLVECPRI 300

Query: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQE 360
           TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKL S+QG+KHLRIGGL+GVTQE
Sbjct: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLKSSQGVKHLRIGGLYGVTQE 360

Query: 361 HFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPV 420
           HFEEL FLLG DCSLTQ+N YK H+Y RGNFYVSCDD+RA+DIEKCPRCQN R++YDCPV
Sbjct: 361 HFEELNFLLGIDCSLTQKNSYKQHFYFRGNFYVSCDDKRAMDIEKCPRCQNPRIIYDCPV 420

Query: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINE-SEYVETFSLELLCSECWKPSLKCQEKR 479
           DGCQGKEHATQACRACTLCIPRCIQCGRCINE SEYVETFSLELLCS+CWKPSL CQEKR
Sbjct: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINESSEYVETFSLELLCSDCWKPSLTCQEKR 480

[Close]

BLAST of Clc08G17960 vs. NCBI nr
Match: XP_022996725.1 (F-box protein SKIP14 [Cucurbita maxima])

HSP 1 Score: 863.2 bits (2229), Expect = 1.3e-246
Identity = 408/480 (85.00%), Postives = 436/480 (90.83%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           MALNFS RP FPLHLSEDN+VSPMRIANGYIVEGIPENN E  GK WH GREVD CFD  
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGAGGT 120
            DICSDSSQDPVSKDILDILPADPFGMDISTTFTA+TGWLEDMEVDYAECV +RGG G  
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRNRGGTGER 120

Query: 121 NIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGSICS 180
           N+ELFAGLNF WNNALKFQ FPE+K IV+KP PM +CDG LD K TGD++C CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDDKETGDLSCSCDFRSICS 180

Query: 181 MDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLLSVGRVC 240
           MDE  FA+DDPPSCCGQQA E +EQ+  YSE+DGGAPHA +SFALCYLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRITDEGLK 300
           +SLHSL+QGDPLLWRNIHI+Q LNEKITDDILLQL+NRARGNLQ LSLVECPRITD+GLK
Sbjct: 241 KSLHSLIQGDPLLWRNIHIEQSLNEKITDDILLQLSNRARGNLQCLSLVECPRITDKGLK 300

Query: 301 RVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQEHFEELK 360
            VLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTS QG+K LRIGGLFGVTQEHFEELK
Sbjct: 301 HVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420
           FLLGS CSL  QN YKPH+YHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLCSECWKPSLKCQEKRDWREQEN 479
           E+A QACRACTLCI RCIQCGRCINE+E+VETFSLELLCS CWKPSL+CQE+RDWREQE+
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERDWREQED 480

[Close]

BLAST of Clc08G17960 vs. ExPASy Swiss-Prot
Match: Q9LU91 (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.3e-104
Identity = 215/489 (43.97%), Postives = 282/489 (57.67%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAEGKPWHHGREVDDCFDQGKD 60
           MALNFS RP F  HLSE+    PM IANG               W         FD G+ 
Sbjct: 1   MALNFSHRP-FSSHLSEE----PMMIANG--------------NW------CSSFDNGR- 60

Query: 61  ICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGG-----A 120
              ++  D  S DILD+LP+DPFGMDI+ TFTAITGWLED+E DY      R        
Sbjct: 61  --KNTGGDASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIG 120

Query: 121 GGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGS 180
            G   +LFAGL+F WNNA++FQ+           Y  Y  +    G   G +   C F  
Sbjct: 121 DGNRQQLFAGLSFFWNNAMQFQS---------SGY-SYGSESLFGGAFDGSLFSTCKFPE 180

Query: 181 ICSMDEAFFANDDPPSCCGQQAIEC-------QEQNRTYSEIDGGAP-----------HA 240
               +  F    D    C    I           +N    E+ G +            H 
Sbjct: 181 SSGENNGFGGALDGDGSCHGAFISASSVDEVLSHENARNGEVVGSSDRCNNGEEDAYVHP 240

Query: 241 AVSFALCYLGVQDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRA 300
           A+ F L +L  +DLLSV  VC+SLH+ V  D LLW++IHI +PLNEKIT++ LL LT RA
Sbjct: 241 AIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERA 300

Query: 301 RGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQG 360
           +G +Q L +V+C RITD+ LKRV+  N ++ K+ VPGCTR++I+G++S LR  K      
Sbjct: 301 QGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQ 360

Query: 361 IKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEK 420
           +KHL++ GLFGVT++H++EL  LL  D +  +Q   KP +YHRG   VSCDD+RA+DIE 
Sbjct: 361 VKHLQLRGLFGVTKDHYDELIDLLNID-NKVKQTIQKPRFYHRGEACVSCDDDRALDIEM 420

Query: 421 CPRCQNLRLVYDCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLC 467
           CP+CQN +LVYDCP + C+GK+  ++ CRAC+LCI RC  CGRCI ++EY E F LELLC
Sbjct: 421 CPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLC 450

[Close]

BLAST of Clc08G17960 vs. ExPASy Swiss-Prot
Match: Q9LK24 (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-49
Identity = 111/254 (43.70%), Postives = 149/254 (58.66%), Query Frame = 0


Query: 212 GGAPHAAVSFALCYLGVQDLLSVGRVCRSLHSLVQGDPLLWRNIHI-DQPLNEKITDDIL 271
           GG  H A    L YL ++++L+V  VCRSL   V  +P  W +I + D  L  ++TD+ L
Sbjct: 124 GGEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESL 183

Query: 272 LQLTNRARGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAF 331
           L+LT RA G ++ L+L  C  ITD GLK+VL SNP LTKLSV GC RLS  G+VS+LR  
Sbjct: 184 LKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDL 243

Query: 332 KLTSTQGIKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYH-RGNFYVSCDD 391
           K ++  G+K L  GG    T+E F+EL  LLG D  +  Q   K  Y   R  FY+  +D
Sbjct: 244 KSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL--ED 303

Query: 392 ERAIDIEKCPRCQNLRLVYDCPVDGCQGK---EHATQACRACTLCIPRCIQCGRCINESE 451
           +R  D+E CP C+   LV+DCP D C  K    ++  +CRAC +CI RC +CG C+N+ E
Sbjct: 304 DRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE 363

Query: 452 YVETFSLELLCSEC 461
             + F     C  C
Sbjct: 364 N-KPFCFAFSCVVC 374

[Close]

BLAST of Clc08G17960 vs. ExPASy Swiss-Prot
Match: Q9ZU90 (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.5e-36
Identity = 82/258 (31.78%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 216 HAAVSFALCYL-GVQDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLT 275
           H  +   L YL  + +LLS+ RV RSL   ++ +  LW  + I+ PL+ ++TDDIL + +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 276 NRARGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTS 335
           +++ G L+ L L +C  +T++GL+RV+++NP +TK+ VPGC+ L+ EG++  + +    +
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLS-KN 136

Query: 336 TQGIKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAID 395
              ++ L I G+ G T++H   L                          Y     E  ID
Sbjct: 137 NHKLETLHINGVNGFTKQHLSAL--------------------------YTYLSSEGTID 196

Query: 396 IEKCPRCQNLRLVYDCPVDGCQGKEHATQACRACTLCIPRCIQCGRCI----NESEYVET 455
           +E CP+C  +R++  C  + C  K+   + CR C LCIPRC +C  C+     ES+    
Sbjct: 197 LEVCPKCDEVRMIPSCSRESCNQKQ---RKCRGCWLCIPRCAECAVCLVGSDTESQEAAC 244

Query: 456 FSLELLCSECWKPSLKCQ 469
            + ++LC ECW    KC+
Sbjct: 257 GNDDVLCLECWLVLPKCR 244

[Close]

BLAST of Clc08G17960 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.1e-06
Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 231 LLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECP 290
           L S+GR C SL SL      LW N+         ITD+ LL++       L++L L  C 
Sbjct: 169 LRSIGRSCPSLGSL-----SLW-NV-------STITDNGLLEIAEGC-AQLEKLELNRCS 228

Query: 291 RITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKH 341
            ITD+GL  + +S P LT+L++  C+R+  EG+++  R+     +  IK+
Sbjct: 229 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKN 264

[Close]

BLAST of Clc08G17960 vs. ExPASy Swiss-Prot
Match: Q06RB8 (Photosystem II reaction center protein J OS=Jasminum nudiflorum OX=126431 GN=psbJ PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-04
Identity = 27/45 (60.00%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 492 MAETTGRIPLWIIGTVTSILVIGLVAAVGLPVRFFGHVHSQGFDL 537
           MA+TTGRIPLWIIGTVT ILVIGLV      + F+G     G  L
Sbjct: 1   MADTTGRIPLWIIGTVTGILVIGLVG-----IFFYGSYSGLGSSL 40

[Close]

BLAST of Clc08G17960 vs. ExPASy TrEMBL
Match: A0A0A0LQT6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350390 PE=4 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 2.6e-253
Identity = 425/491 (86.56%), Postives = 444/491 (90.43%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAEG--KPWHHGREVDDCFDQG 60
           MALNFSCRP  PLHLSEDNLVSPMRIANGYIVEGIPENNAEG  KPWH GREVDDCFD G
Sbjct: 1   MALNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCRKPWHRGREVDDCFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDR------ 120
           KD CSDSSQDPVSKDIL ILPADPFGMDISTTFTAITGWLEDMEVDY EC S+R      
Sbjct: 61  KDSCSDSSQDPVSKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSNRAGTGAG 120

Query: 121 ----GGAGGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVT 180
                GAGG +IE FA +NFIWNNALKFQTFPE KS V+KPYP+Y+CD CLDGKVTGDV 
Sbjct: 121 AGAGAGAGGKDIEFFACMNFIWNNALKFQTFPETKSTVQKPYPIYSCDRCLDGKVTGDVA 180

Query: 181 CCCDFGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGV 240
           CCCDFGSICSMDEAFFANDD PSCCGQ  IECQEQN TY+EIDGGAPHAA+SFALCYLGV
Sbjct: 181 CCCDFGSICSMDEAFFANDDAPSCCGQLDIECQEQNYTYTEIDGGAPHAALSFALCYLGV 240

Query: 241 QDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVE 300
           QDLLSVGRVCRSLHS+VQ DPLLWRNIHI QPLNEKITD+ILLQLTNRARGNLQ LSLVE
Sbjct: 241 QDLLSVGRVCRSLHSVVQDDPLLWRNIHIGQPLNEKITDNILLQLTNRARGNLQCLSLVE 300

Query: 301 CPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFG 360
           CPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQG+KHLRIGGL+G
Sbjct: 301 CPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGVKHLRIGGLYG 360

Query: 361 VTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVY 420
           VTQEHFEEL FLLG D SLTQ+N YK H+Y RGNFYVSCDD+RA+DIEKCPRCQN R+VY
Sbjct: 361 VTQEHFEELNFLLGIDSSLTQKNSYKQHFYFRGNFYVSCDDKRAMDIEKCPRCQNPRIVY 420

Query: 421 DCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINE-SEYVETFSLELLCSECWKPSLKC 479
           DCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINE SEYVETFSLELLCS+CWKP L C
Sbjct: 421 DCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINESSEYVETFSLELLCSDCWKPLLTC 480

[Close]

BLAST of Clc08G17960 vs. ExPASy TrEMBL
Match: A0A1S3BB30 (F-box protein SKIP14-like OS=Cucumis melo OX=3656 GN=LOC103487750 PE=4 SV=1)

HSP 1 Score: 882.1 bits (2278), Expect = 1.3e-252
Identity = 423/487 (86.86%), Postives = 443/487 (90.97%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           M LNFSCRP  PLHLSEDNLVSPMRIANGYIVEGIPENNAE  GKPWH GREVD CFD G
Sbjct: 1   MTLNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCGKPWHRGREVDGCFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGA--- 120
           KD CSDSSQDPV KDIL ILPADPFGMDISTTFTAITGWLEDMEVDY EC S  GGA   
Sbjct: 61  KDSCSDSSQDPVCKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSSSGGAGTG 120

Query: 121 ---GGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCD 180
              GG +IE+FA LNFIWN+ALKFQTFPE KS V+KPYP+Y+CD CLDGKVTGDV CCCD
Sbjct: 121 AGSGGKDIEIFACLNFIWNSALKFQTFPETKSTVQKPYPIYSCDRCLDGKVTGDVACCCD 180

Query: 181 FGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLL 240
           FGSICSMDEAFFANDDPPS CGQ  IECQEQN TY+EIDGGAPHAA+SFAL YLGVQDLL
Sbjct: 181 FGSICSMDEAFFANDDPPSRCGQLDIECQEQNCTYTEIDGGAPHAALSFALSYLGVQDLL 240

Query: 241 SVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRI 300
           SVGRVCRSLHS+VQ DPLLWRNIHIDQPLNEKITD+ILLQLTNRARGNLQ LSLVECPRI
Sbjct: 241 SVGRVCRSLHSVVQDDPLLWRNIHIDQPLNEKITDNILLQLTNRARGNLQCLSLVECPRI 300

Query: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQE 360
           TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKL S+QG+KHLRIGGL+GVTQE
Sbjct: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLKSSQGVKHLRIGGLYGVTQE 360

Query: 361 HFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPV 420
           HFEEL FLLG DCSLTQ+N YK H+Y RGNFYVSCDD+RA+DIEKCPRCQN R++YDCPV
Sbjct: 361 HFEELNFLLGIDCSLTQKNSYKQHFYFRGNFYVSCDDKRAMDIEKCPRCQNPRIIYDCPV 420

Query: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINE-SEYVETFSLELLCSECWKPSLKCQEKR 479
           DGCQGKEHATQACRACTLCIPRCIQCGRCINE SEYVETFSLELLCS+CWKPSL CQEKR
Sbjct: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINESSEYVETFSLELLCSDCWKPSLTCQEKR 480

[Close]

BLAST of Clc08G17960 vs. ExPASy TrEMBL
Match: A0A5A7V0F1 (F-box protein SKIP14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001640 PE=4 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.7e-252
Identity = 423/487 (86.86%), Postives = 443/487 (90.97%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           M LNFSCRP  PLHLSEDNLVSPMRIANGYIVEGIPENNAE  GKPWH GREVD CFD G
Sbjct: 1   MTLNFSCRPLIPLHLSEDNLVSPMRIANGYIVEGIPENNAEGCGKPWHRGREVDGCFDHG 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGA--- 120
           KD CSDSSQDPV KDIL ILPADPFGMDISTTFTAITGWLEDMEVDY EC S  GGA   
Sbjct: 61  KDSCSDSSQDPVCKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFSSSGGAGAG 120

Query: 121 ---GGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCD 180
              GG +IE+FA LNFIWN+ALKFQTFPE KS V+KPYP+Y+CD CLDGKVTGDV CCCD
Sbjct: 121 AGSGGKDIEIFACLNFIWNSALKFQTFPETKSTVQKPYPIYSCDRCLDGKVTGDVPCCCD 180

Query: 181 FGSICSMDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLL 240
           FGSICSMDEAFFANDDPPS CGQ  IECQEQN TY+EIDGGAPHAA+SFAL YLGVQDLL
Sbjct: 181 FGSICSMDEAFFANDDPPSRCGQLDIECQEQNCTYTEIDGGAPHAALSFALSYLGVQDLL 240

Query: 241 SVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRI 300
           SVGRVCRSLHS+VQ DPLLWRNIHIDQPLNEKITD+ILLQLTNRARGNLQ LSLVECPRI
Sbjct: 241 SVGRVCRSLHSVVQDDPLLWRNIHIDQPLNEKITDNILLQLTNRARGNLQCLSLVECPRI 300

Query: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQE 360
           TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKL S+QG+KHLRIGGL+GVTQE
Sbjct: 301 TDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLKSSQGVKHLRIGGLYGVTQE 360

Query: 361 HFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPV 420
           HFEEL FLLG DCSLTQ+N YK H+Y RGNFYVSCDD+RA+DIEKCPRCQN R++YDCPV
Sbjct: 361 HFEELNFLLGIDCSLTQKNSYKQHFYFRGNFYVSCDDKRAMDIEKCPRCQNPRIIYDCPV 420

Query: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINE-SEYVETFSLELLCSECWKPSLKCQEKR 479
           DGCQGKEHATQACRACTLCIPRCIQCGRCINE SEYVETFSLELLCS+CWKPSL CQEKR
Sbjct: 421 DGCQGKEHATQACRACTLCIPRCIQCGRCINESSEYVETFSLELLCSDCWKPSLTCQEKR 480

[Close]

BLAST of Clc08G17960 vs. ExPASy TrEMBL
Match: A0A6J1K7K7 (F-box protein SKIP14 OS=Cucurbita maxima OX=3661 GN=LOC111491883 PE=4 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 6.2e-247
Identity = 408/480 (85.00%), Postives = 436/480 (90.83%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           MALNFS RP FPLHLSEDN+VSPMRIANGYIVEGIPENN E  GK WH GREVD CFD  
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGAGGT 120
            DICSDSSQDPVSKDILDILPADPFGMDISTTFTA+TGWLEDMEVDYAECV +RGG G  
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRNRGGTGER 120

Query: 121 NIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGSICS 180
           N+ELFAGLNF WNNALKFQ FPE+K IV+KP PM +CDG LD K TGD++C CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDDKETGDLSCSCDFRSICS 180

Query: 181 MDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLLSVGRVC 240
           MDE  FA+DDPPSCCGQQA E +EQ+  YSE+DGGAPHA +SFALCYLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRITDEGLK 300
           +SLHSL+QGDPLLWRNIHI+Q LNEKITDDILLQL+NRARGNLQ LSLVECPRITD+GLK
Sbjct: 241 KSLHSLIQGDPLLWRNIHIEQSLNEKITDDILLQLSNRARGNLQCLSLVECPRITDKGLK 300

Query: 301 RVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQEHFEELK 360
            VLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTS QG+K LRIGGLFGVTQEHFEELK
Sbjct: 301 HVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420
           FLLGS CSL  QN YKPH+YHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLCSECWKPSLKCQEKRDWREQEN 479
           E+A QACRACTLCI RCIQCGRCINE+E+VETFSLELLCS CWKPSL+CQE+RDWREQE+
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERDWREQED 480

[Close]

BLAST of Clc08G17960 vs. ExPASy TrEMBL
Match: A0A6J1HDM9 (F-box protein SKIP14 OS=Cucurbita moschata OX=3662 GN=LOC111462561 PE=4 SV=1)

HSP 1 Score: 862.1 bits (2226), Expect = 1.4e-246
Identity = 408/477 (85.53%), Postives = 433/477 (90.78%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAE--GKPWHHGREVDDCFDQG 60
           MALNFS RP FPLHLSEDN+VSPMRIANGYIVEGIPENN E  GK WH GREVD CFD  
Sbjct: 1   MALNFSRRPIFPLHLSEDNIVSPMRIANGYIVEGIPENNVESCGKSWHRGREVDACFDHR 60

Query: 61  KDICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGGAGGT 120
            DICSDSSQDPVSKDILDILPADPFGMDISTTFTA+TGWLEDMEVDYAECV D GG G  
Sbjct: 61  NDICSDSSQDPVSKDILDILPADPFGMDISTTFTALTGWLEDMEVDYAECVRDGGGTGER 120

Query: 121 NIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGSICS 180
           N+ELFAGLNF WNNALKFQ FPE+K IV+KP PM +CDG LD K TGDV+C CDF SICS
Sbjct: 121 NVELFAGLNFFWNNALKFQAFPEIKGIVQKPDPMCSCDGFLDEKETGDVSCSCDFRSICS 180

Query: 181 MDEAFFANDDPPSCCGQQAIECQEQNRTYSEIDGGAPHAAVSFALCYLGVQDLLSVGRVC 240
           MDE  FA+DDPPSCCGQQA E +EQ+  YSE+DGGAPHA +SFALCYLGV+DLLSVGRVC
Sbjct: 181 MDEVSFADDDPPSCCGQQAAESEEQSCIYSEVDGGAPHAGLSFALCYLGVRDLLSVGRVC 240

Query: 241 RSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECPRITDEGLK 300
            SLHS+VQGDPLLWRNIHI+QPLNEKITDDILLQL+NRARGNLQ LSLVECPRITDEGLK
Sbjct: 241 NSLHSVVQGDPLLWRNIHIEQPLNEKITDDILLQLSNRARGNLQCLSLVECPRITDEGLK 300

Query: 301 RVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKHLRIGGLFGVTQEHFEELK 360
           +VLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTS QG+K LRIGGLFGVTQEHFEELK
Sbjct: 301 QVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSIQGVKLLRIGGLFGVTQEHFEELK 360

Query: 361 FLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420
           FLLGS CSL  QN YKPH+YHRGNFY+SCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK
Sbjct: 361 FLLGSGCSLKPQNSYKPHFYHRGNFYLSCDDERAIDIEKCPRCQNLRLVYDCPVDGCQGK 420

Query: 421 EHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLCSECWKPSLKCQEKRDWRE 476
           E+A QACRACTLCI RCIQCGRCINE+E+VETFSLELLCS CWKPSL+CQE+RDWRE
Sbjct: 421 EYAAQACRACTLCISRCIQCGRCINENEFVETFSLELLCSGCWKPSLECQEERDWRE 477

[Close]

BLAST of Clc08G17960 vs. TAIR 10
Match: AT3G26000.1 (Ribonuclease inhibitor )

HSP 1 Score: 380.2 bits (975), Expect = 3.1e-105
Identity = 215/489 (43.97%), Postives = 282/489 (57.67%), Query Frame = 0


Query: 1   MALNFSCRPFFPLHLSEDNLVSPMRIANGYIVEGIPENNAEGKPWHHGREVDDCFDQGKD 60
           MALNFS RP F  HLSE+    PM IANG               W         FD G+ 
Sbjct: 1   MALNFSHRP-FSSHLSEE----PMMIANG--------------NW------CSSFDNGR- 60

Query: 61  ICSDSSQDPVSKDILDILPADPFGMDISTTFTAITGWLEDMEVDYAECVSDRGG-----A 120
              ++  D  S DILD+LP+DPFGMDI+ TFTAITGWLED+E DY      R        
Sbjct: 61  --KNTGGDASSVDILDVLPSDPFGMDINNTFTAITGWLEDLEDDYNNQYGRRRRDDIWIG 120

Query: 121 GGTNIELFAGLNFIWNNALKFQTFPEVKSIVEKPYPMYNCDGCLDGKVTGDVTCCCDFGS 180
            G   +LFAGL+F WNNA++FQ+           Y  Y  +    G   G +   C F  
Sbjct: 121 DGNRQQLFAGLSFFWNNAMQFQS---------SGY-SYGSESLFGGAFDGSLFSTCKFPE 180

Query: 181 ICSMDEAFFANDDPPSCCGQQAIEC-------QEQNRTYSEIDGGAP-----------HA 240
               +  F    D    C    I           +N    E+ G +            H 
Sbjct: 181 SSGENNGFGGALDGDGSCHGAFISASSVDEVLSHENARNGEVVGSSDRCNNGEEDAYVHP 240

Query: 241 AVSFALCYLGVQDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRA 300
           A+ F L +L  +DLLSV  VC+SLH+ V  D LLW++IHI +PLNEKIT++ LL LT RA
Sbjct: 241 AIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTERA 300

Query: 301 RGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQG 360
           +G +Q L +V+C RITD+ LKRV+  N ++ K+ VPGCTR++I+G++S LR  K      
Sbjct: 301 QGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGKLQ 360

Query: 361 IKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAIDIEK 420
           +KHL++ GLFGVT++H++EL  LL  D +  +Q   KP +YHRG   VSCDD+RA+DIE 
Sbjct: 361 VKHLQLRGLFGVTKDHYDELIDLLNID-NKVKQTIQKPRFYHRGEACVSCDDDRALDIEM 420

Query: 421 CPRCQNLRLVYDCPVDGCQGKEHATQACRACTLCIPRCIQCGRCINESEYVETFSLELLC 467
           CP+CQN +LVYDCP + C+GK+  ++ CRAC+LCI RC  CGRCI ++EY E F LELLC
Sbjct: 421 CPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIIDTEYEEMFCLELLC 450

[Close]

BLAST of Clc08G17960 vs. TAIR 10
Match: AT3G27290.1 (RNI-like superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 9.6e-51
Identity = 111/254 (43.70%), Postives = 149/254 (58.66%), Query Frame = 0


Query: 212 GGAPHAAVSFALCYLGVQDLLSVGRVCRSLHSLVQGDPLLWRNIHI-DQPLNEKITDDIL 271
           GG  H A    L YL ++++L+V  VCRSL   V  +P  W +I + D  L  ++TD+ L
Sbjct: 124 GGEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESL 183

Query: 272 LQLTNRARGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAF 331
           L+LT RA G ++ L+L  C  ITD GLK+VL SNP LTKLSV GC RLS  G+VS+LR  
Sbjct: 184 LKLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDL 243

Query: 332 KLTSTQGIKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYH-RGNFYVSCDD 391
           K ++  G+K L  GG    T+E F+EL  LLG D  +  Q   K  Y   R  FY+  +D
Sbjct: 244 KSSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL--ED 303

Query: 392 ERAIDIEKCPRCQNLRLVYDCPVDGCQGK---EHATQACRACTLCIPRCIQCGRCINESE 451
           +R  D+E CP C+   LV+DCP D C  K    ++  +CRAC +CI RC +CG C+N+ E
Sbjct: 304 DRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE 363

Query: 452 YVETFSLELLCSEC 461
             + F     C  C
Sbjct: 364 N-KPFCFAFSCVVC 374

[Close]

BLAST of Clc08G17960 vs. TAIR 10
Match: AT2G01620.1 (RNI-like superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 4.6e-37
Identity = 82/258 (31.78%), Postives = 137/258 (53.10%), Query Frame = 0


Query: 216 HAAVSFALCYL-GVQDLLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLT 275
           H  +   L YL  + +LLS+ RV RSL   ++ +  LW  + I+ PL+ ++TDDIL + +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 276 NRARGNLQRLSLVECPRITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTS 335
           +++ G L+ L L +C  +T++GL+RV+++NP +TK+ VPGC+ L+ EG++  + +    +
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLS-KN 136

Query: 336 TQGIKHLRIGGLFGVTQEHFEELKFLLGSDCSLTQQNYYKPHYYHRGNFYVSCDDERAID 395
              ++ L I G+ G T++H   L                          Y     E  ID
Sbjct: 137 NHKLETLHINGVNGFTKQHLSAL--------------------------YTYLSSEGTID 196

Query: 396 IEKCPRCQNLRLVYDCPVDGCQGKEHATQACRACTLCIPRCIQCGRCI----NESEYVET 455
           +E CP+C  +R++  C  + C  K+   + CR C LCIPRC +C  C+     ES+    
Sbjct: 197 LEVCPKCDEVRMIPSCSRESCNQKQ---RKCRGCWLCIPRCAECAVCLVGSDTESQEAAC 244

Query: 456 FSLELLCSECWKPSLKCQ 469
            + ++LC ECW    KC+
Sbjct: 257 GNDDVLCLECWLVLPKCR 244

[Close]

BLAST of Clc08G17960 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 54.7 bits (130), Expect = 2.9e-07
Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 231 LLSVGRVCRSLHSLVQGDPLLWRNIHIDQPLNEKITDDILLQLTNRARGNLQRLSLVECP 290
           L S+GR C SL SL      LW N+         ITD+ LL++       L++L L  C 
Sbjct: 169 LRSIGRSCPSLGSL-----SLW-NV-------STITDNGLLEIAEGC-AQLEKLELNRCS 228

Query: 291 RITDEGLKRVLESNPRLTKLSVPGCTRLSIEGVVSSLRAFKLTSTQGIKH 341
            ITD+GL  + +S P LT+L++  C+R+  EG+++  R+     +  IK+
Sbjct: 229 TITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKN 264

[Close]

BLAST of Clc08G17960 vs. TAIR 10
Match: ATCG00550.1 (photosystem II reaction center protein J )

HSP 1 Score: 46.6 bits (109), Expect = 8.0e-05
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 492 MAETTGRIPLWIIGTVTSILVIGLVAAVGLPVRFFGHVHSQGFDL 537
           MA+TTGRIPLW+IGTV  ILVIGL+      + F+G     G  L
Sbjct: 1   MADTTGRIPLWVIGTVAGILVIGLIG-----IFFYGSYSGLGSSL 40

The following BLAST results are available for this feature:

BLAST of Clc08G17960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884813.1	1.7e-262	90.55	F-box protein SKIP14 [Benincasa hispida]	[more]
XP_004142948.1	5.3e-253	86.56	F-box protein SKIP14 [Cucumis sativus] >KGN62356.1 hypothetical protein Csa_0187...	[more]
XP_008444416.1	2.7e-252	86.86	PREDICTED: F-box protein SKIP14-like [Cucumis melo]	[more]
KAA0061028.1	3.5e-252	86.86	F-box protein SKIP14-like [Cucumis melo var. makuwa]	[more]
XP_022996725.1	1.3e-246	85.00	F-box protein SKIP14 [Cucurbita maxima]	[more]

BLAST of Clc08G17960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU91	4.3e-104	43.97	F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1	[more]
Q9LK24	1.4e-49	43.70	F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1	[more]
Q9ZU90	6.5e-36	31.78	F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1	[more]
Q9SKK0	4.1e-06	34.55	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
Q06RB8	1.7e-04	60.00	Photosystem II reaction center protein J OS=Jasminum nudiflorum OX=126431 GN=psb...	[more]

BLAST of Clc08G17960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQT6	2.6e-253	86.56	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350390 PE=4 ...	[more]
A0A1S3BB30	1.3e-252	86.86	F-box protein SKIP14-like OS=Cucumis melo OX=3656 GN=LOC103487750 PE=4 SV=1	[more]
A0A5A7V0F1	1.7e-252	86.86	F-box protein SKIP14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1K7K7	6.2e-247	85.00	F-box protein SKIP14 OS=Cucurbita maxima OX=3661 GN=LOC111491883 PE=4 SV=1	[more]
A0A6J1HDM9	1.4e-246	85.53	F-box protein SKIP14 OS=Cucurbita moschata OX=3662 GN=LOC111462561 PE=4 SV=1	[more]

BLAST of Clc08G17960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26000.1	3.1e-105	43.97	Ribonuclease inhibitor	[more]
AT3G27290.1	9.6e-51	43.70	RNI-like superfamily protein	[more]
AT2G01620.1	4.6e-37	31.78	RNI-like superfamily protein	[more]
AT2G25490.1	2.9e-07	34.55	EIN3-binding F box protein 1	[more]
ATCG00550.1	8.0e-05	53.33	photosystem II reaction center protein J	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 304..329 e-value: 110.0 score: 6.5 coord: 278..303 e-value: 0.087 score: 21.9
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 260..431 e-value: 1.0E-10 score: 43.1
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 224..257 e-value: 2.7E-6 score: 27.1
None	No IPR available	GENE3D	1.20.1280.50		coord: 217..255 e-value: 2.3E-5 score: 26.2
None	No IPR available	GENE3D	6.10.250.2070		coord: 492..521 e-value: 2.4E-7 score: 32.4
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 1..473
None	No IPR available	PANTHER	PTHR13382:SF22	F-BOX PROTEIN SKIP14	coord: 1..473
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 263..370
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 221..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G17960.2	Clc08G17960.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding