Clc08G17840 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G17840
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionGelsolin-related protein of 125 kDa isoform X1
LocationClcChr08: 28052020 .. 28054265 (-)
RNA-Seq ExpressionClc08G17840
SyntenyClc08G17840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGTGAAAAGAGAGGGAAAAACATTGAAAAGGGAAGAGTGCGAGGGAAATAGAAACAACGAAGAAGAGAGAATTTCGGTGAGAGACGGTTTCTTCCGCTTAAATGGTGAATCCGCCATTTCATTTGGTCGCCGTAAGCGTTTGTTGGTGTTCTTGGTTTCAAATTCATGTTACATGAACCCGCATTCCCATCCGTTGAATTCTCCTCTGTTGGCGCCCCATCAAGGAAACTCTCCAGCCATTAAACACTCTTTTGGTAGTAAGCATATGAATCCTTGAGAATTTGAGTTTCAATTCCTCTCTCTCTCTCTTCATTTAATGCGAAGTGGTTTCGAGGACTGTTGATCGGTCTGGTTTTGCGATTCACTCCTGTTGATTTCCGCGGAGCTTTTTACAAGTCAAAGGTAAGGAATCTTCAACCTCAGACACGAAATGTGATATTGTTCGTCGATTTTTTTTGAAGTGATGAGGAGAATAATTGAACTGACTGAATTGATGAAAAGTTCCGTCTTCTGTTGGAGCATTCAGATAGGTTTTGTTTTGTTTCAACTACAATTTGGCATTATATTTTACTTAATTTCGCGGAATCGGTTAAATCGACAAAATTCCATTTGTCTTTTCCTTTGAGGTTGACCTAACGAATCATCTTATACGGTGATTATAATTAGCAAAACCAGCACGTTTGTTTTCTTTTGTGAAACATTTCTTGCTGCCTTTCAGATGTACTGTTTAATTAATTAAGTACAAAAGGTTTAATGATCGATGAACTGATGATAGGAAATTACAGGACTTATCTTCGAATTTGCTTTCTTAAGCATTATGTTTCCTTTCGCATCGCAAACAGATTGTTATTGCTCAAAGAAAATATAGAGATGAGAGTAAAATTAGTTTGAGAATAGCGGAGGCTCTAGGATTTGAAGATTCTGAAAACTCCTTCCAACAAATTATTTGACATTAATCTCTGTCTGTTTATTCTCTTGATCTTGCGCAAACTTTTGTTTGTGTTTTTCTTTAATCTACACAGGATGAGTTCTAGACGACGTCCACTGCAGACCTGTGGAGTTTCGTTTCTGGCCGTAGCCCACAGCACCTGCTCAAGAGCTCAGAATCTTGATGGACGGTTGGGTTCAATAACAAGAAAGATGGTCTGGATAGCCAAGCTTATGAAACCTTTGATTTTTGTCCTGAAATATCAGTGCTTATTGGTCGTCTCCTTCGTTGATGATCGTTTACTAGCAACCGCTAACATTCTGGAGAAGATTTTTCCTCCATCCAAACTTGTTTTTGATAAGATTGACGATCTTCTTCATCTAATTGAAACTTTTCCATCAAAATTTGACGATGTTGTCGACAAGATTCCTTGCTTCAACCAGGTTCTTTTACTAGATTGGACAGTGACCCACGCCATATCTTTGCTCAAGTTCATGATAACTATACTAATGAACTGGGGGAGAGATGGAACAAGAGAGAAGGAAATTTTAGTTGATATAAACTACAAAGAGGGTCGTAATGGATCCGAATCAGCTGATAAATCTGAATGCTGCTCAGAAGCAATTGTTTCATCTGTGTCTGAAACACAACAAGCTGAAGCTGCCATGGATGAGAAAATGAAATCTAACCCCATGAAGGGAGCTTATAAAGAAGTTCTGAAATTGGGTACAAAAGGGGTATTGAAAGATGATGAAGGCTGCAAAGATAATGAAAAGAGCACTAACAAAGTGGAGAAGGGAACAAGAGACGAAATGGATGATAAAGATGAGAAGGGAAATTCAAAGGAAGTGGAGAATAATGAGAGCCAGATGGCTAAAATGGAAGAATCTGTGGAAAAAGCAGAAGGAAATGAAGAAATTCCAGATGATCAAAGCCATAAAGGGATCATAAGTAATGAAGAGAATTCAGAAGTGAAGGAAGAGAAGGAAGAAGGGCTAATGGATTATGAAAGTGAAAAGGGAAGTAATGTAAGCATAGAGAATGAGGAAGATATTTTGGAATTGTTTGAGACTGCTTGGCTCATGAAACCAACAGTAAAGGGAAAAGGCAACTTGATGCCTCGTTCAGCTTCATTTGTCTGAACTCTCAAGATCGAAGGTTTGTATATTTTGTATATAGAATCTCGATGCTGTATAAATGGAATTGTTTTTGGTCTTTTTAATTTTACACAAGTCTTGAAGGATTTTGAATCATAATATTAAAGTAAGTTCTTTGTTTCGTTTTCATTGAGAATAACAACAGGATTTCATGCC

mRNA sequence

GAGAGAGTGAAAAGAGAGGGAAAAACATTGAAAAGGGAAGAGTGCGAGGGAAATAGAAACAACGAAGAAGAGAGAATTTCGGTGAGAGACGGTTTCTTCCGCTTAAATGGTGAATCCGCCATTTCATTTGGTCGCCGTAAGCGTTTGTTGGTGTTCTTGGTTTCAAATTCATGTTACATGAACCCGCATTCCCATCCGTTGAATTCTCCTCTGTTGGCGCCCCATCAAGGAAACTCTCCAGCCATTAAACACTCTTTTGGTAGTAAGCATATGAATCCTTGAGAATTTGAGTTTCAATTCCTCTCTCTCTCTCTTCATTTAATGCGAAGTGGTTTCGAGGACTGTTGATCGGTCTGGTTTTGCGATTCACTCCTGTTGATTTCCGCGGAGCTTTTTACAAGTCAAAGGATGAGTTCTAGACGACGTCCACTGCAGACCTGTGGAGTTTCGTTTCTGGCCGTAGCCCACAGCACCTGCTCAAGAGCTCAGAATCTTGATGGACGGTTGGGTTCAATAACAAGAAAGATGGTCTGGATAGCCAAGCTTATGAAACCTTTGATTTTTGTCCTGAAATATCAGTGCTTATTGGTCGTCTCCTTCGTTGATGATCGTTTACTAGCAACCGCTAACATTCTGGAGAAGATTTTTCCTCCATCCAAACTTGTTTTTGATAAGATTGACGATCTTCTTCATCTAATTGAAACTTTTCCATCAAAATTTGACGATGTTGTCGACAAGATTCCTTGCTTCAACCAGGTTCTTTTACTAGATTGGACAGTGACCCACGCCATATCTTTGCTCAAGTTCATGATAACTATACTAATGAACTGGGGGAGAGATGGAACAAGAGAGAAGGAAATTTTAGTTGATATAAACTACAAAGAGGGTCGTAATGGATCCGAATCAGCTGATAAATCTGAATGCTGCTCAGAAGCAATTGTTTCATCTGTGTCTGAAACACAACAAGCTGAAGCTGCCATGGATGAGAAAATGAAATCTAACCCCATGAAGGGAGCTTATAAAGAAGTTCTGAAATTGGGTACAAAAGGGGTATTGAAAGATGATGAAGGCTGCAAAGATAATGAAAAGAGCACTAACAAAGTGGAGAAGGGAACAAGAGACGAAATGGATGATAAAGATGAGAAGGGAAATTCAAAGGAAGTGGAGAATAATGAGAGCCAGATGGCTAAAATGGAAGAATCTGTGGAAAAAGCAGAAGGAAATGAAGAAATTCCAGATGATCAAAGCCATAAAGGGATCATAAGTAATGAAGAGAATTCAGAAGTGAAGGAAGAGAAGGAAGAAGGGCTAATGGATTATGAAAGTGAAAAGGGAAGTAATGTAAGCATAGAGAATGAGGAAGATATTTTGGAATTGTTTGAGACTGCTTGGCTCATGAAACCAACAGTAAAGGGAAAAGGCAACTTGATGCCTCGTTCAGCTTCATTTGTCTGAACTCTCAAGATCGAAGGTTTGTATATTTTGTATATAGAATCTCGATGCTGTATAAATGGAATTGTTTTTGGTCTTTTTAATTTTACACAAGTCTTGAAGGATTTTGAATCATAATATTAAAGTAAGTTCTTTGTTTCGTTTTCATTGAGAATAACAACAGGATTTCATGCC

Coding sequence (CDS)

ATGAGTTCTAGACGACGTCCACTGCAGACCTGTGGAGTTTCGTTTCTGGCCGTAGCCCACAGCACCTGCTCAAGAGCTCAGAATCTTGATGGACGGTTGGGTTCAATAACAAGAAAGATGGTCTGGATAGCCAAGCTTATGAAACCTTTGATTTTTGTCCTGAAATATCAGTGCTTATTGGTCGTCTCCTTCGTTGATGATCGTTTACTAGCAACCGCTAACATTCTGGAGAAGATTTTTCCTCCATCCAAACTTGTTTTTGATAAGATTGACGATCTTCTTCATCTAATTGAAACTTTTCCATCAAAATTTGACGATGTTGTCGACAAGATTCCTTGCTTCAACCAGGTTCTTTTACTAGATTGGACAGTGACCCACGCCATATCTTTGCTCAAGTTCATGATAACTATACTAATGAACTGGGGGAGAGATGGAACAAGAGAGAAGGAAATTTTAGTTGATATAAACTACAAAGAGGGTCGTAATGGATCCGAATCAGCTGATAAATCTGAATGCTGCTCAGAAGCAATTGTTTCATCTGTGTCTGAAACACAACAAGCTGAAGCTGCCATGGATGAGAAAATGAAATCTAACCCCATGAAGGGAGCTTATAAAGAAGTTCTGAAATTGGGTACAAAAGGGGTATTGAAAGATGATGAAGGCTGCAAAGATAATGAAAAGAGCACTAACAAAGTGGAGAAGGGAACAAGAGACGAAATGGATGATAAAGATGAGAAGGGAAATTCAAAGGAAGTGGAGAATAATGAGAGCCAGATGGCTAAAATGGAAGAATCTGTGGAAAAAGCAGAAGGAAATGAAGAAATTCCAGATGATCAAAGCCATAAAGGGATCATAAGTAATGAAGAGAATTCAGAAGTGAAGGAAGAGAAGGAAGAAGGGCTAATGGATTATGAAAGTGAAAAGGGAAGTAATGTAAGCATAGAGAATGAGGAAGATATTTTGGAATTGTTTGAGACTGCTTGGCTCATGAAACCAACAGTAAAGGGAAAAGGCAACTTGATGCCTCGTTCAGCTTCATTTGTCTGA

Protein sequence

MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLLVVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLLDWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSSVSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEMDDKDEKGNSKEVENNESQMAKMEESVEKAEGNEEIPDDQSHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEEDILELFETAWLMKPTVKGKGNLMPRSASFV
Homology
BLAST of Clc08G17840 vs. NCBI nr
Match: XP_038884034.1 (myelin transcription factor 1 [Benincasa hispida] >XP_038884035.1 myelin transcription factor 1 [Benincasa hispida])

HSP 1 Score: 496.1 bits (1276), Expect = 2.4e-136
Identity = 282/369 (76.42%), Postives = 308/369 (83.47%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTC VSFLAVAHSTCSRAQNLDGRLGSITRKMV IAKLMKPLIFVL+YQCLL
Sbjct: 1   MSSRRRPLQTCVVSFLAVAHSTCSRAQNLDGRLGSITRKMVRIAKLMKPLIFVLQYQCLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
           V+SF+DDRLLA ANILEKIFPP KLVFDKID LLHLIETFPSKFDD VD+IPCFNQVLLL
Sbjct: 61  VLSFIDDRLLAIANILEKIFPPFKLVFDKIDHLLHLIETFPSKFDDAVDEIPCFNQVLLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DWTVTHAISLLKFMITILMNWGRDGTREKEILVD+NYKEGR  SES DKSECCSE IVSS
Sbjct: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDMNYKEGRK-SESTDKSECCSEGIVSS 180

Query: 181 VSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEM 240
           VSETQQAEAAMDEKMKSN +KG  KEVLK+        DE  K+NEKSTN VEKGTR+EM
Sbjct: 181 VSETQQAEAAMDEKMKSNSVKGTCKEVLKM--------DEDSKENEKSTNGVEKGTRNEM 240

Query: 241 DDKD-----EKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDDQ 300
           DDK+     EKGNSKEV                ENNE++M +MEESVEK EGNEEIPD+ 
Sbjct: 241 DDKEDCKNNEKGNSKEVEKGIEVVEDNESCKKDENNENKMIRMEESVEKTEGNEEIPDEG 300

Query: 301 SHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEEDILELFETAWLMKPTVKGKGN 349
           + +  +  E+  E +EE+EEGLMDYESEKGSN S+E    ILELFETAWLMKPT++G+GN
Sbjct: 301 NSR--VKEEKEEEEEEEEEEGLMDYESEKGSNGSME----ILELFETAWLMKPTIRGQGN 354

BLAST of Clc08G17840 vs. NCBI nr
Match: KAA0061016.1 (gelsolin-related protein of 125 kDa isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 490.0 bits (1260), Expect = 1.7e-134
Identity = 274/369 (74.25%), Postives = 304/369 (82.38%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLM PLIF+LKYQ LL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
            +SF+DDRLLA  NILEK+FPP KL+FDKIDDLLHLIETFPSKFDD VD+IPCFNQVLLL
Sbjct: 61  ALSFIDDRLLAITNILEKVFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQVLLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DWTVTHAISLLK MITILMNWGRD  REKEILVD+NYKE RNGSES DKS CCSE IVSS
Sbjct: 121 DWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVSS 180

Query: 181 VSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEM 240
           +SETQ+  A+MD KMKSNPMKG+YKE+LK+G  GVLKDDE  K+NEK      KGTRDE+
Sbjct: 181 ISETQR--ASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEK------KGTRDEI 240

Query: 241 DDK-----DEKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDDQ 300
           +DK     DE GNSKEV                ENNE   A +EESV+KA+GNEEI DDQ
Sbjct: 241 NDKEDCKNDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQ 300

Query: 301 SHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEED-ILELFETAWLMKPTVKGKG 348
           SHK II+NEE    K ++EEG+MDYESEKG+N S +N+ED ILELFE+AWLMKPT+KGKG
Sbjct: 301 SHKRIINNEE----KSKEEEGVMDYESEKGNNGSRKNDEDGILELFESAWLMKPTIKGKG 357

BLAST of Clc08G17840 vs. NCBI nr
Match: XP_008444439.1 (PREDICTED: uncharacterized protein LOC103487764 [Cucumis melo] >XP_008444440.1 PREDICTED: uncharacterized protein LOC103487764 [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 4.3e-133
Identity = 274/369 (74.25%), Postives = 303/369 (82.11%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLM PLIF+LKYQ LL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
            +SF+DDRLLA ANILEKIFPP KL+FDKIDDLLHLIETFPSKFDD VD+IPCFNQVLLL
Sbjct: 61  ALSFIDDRLLAIANILEKIFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQVLLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DWTVTHAISLLK MITILMNWGRD  REKEILVD+NYKE RNGSES DKS CCSE IVSS
Sbjct: 121 DWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVSS 180

Query: 181 VSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEM 240
           +SETQ+  A+MD KMKSNPMKG+YKE+LK+G  GVLKDDE  K+NEK      KGTRD++
Sbjct: 181 ISETQR--ASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEK------KGTRDKI 240

Query: 241 DDK-----DEKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDDQ 300
           +DK     DE GNSKEV                ENNE   A +EESV+KA+GNEEI DDQ
Sbjct: 241 NDKEDCKNDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQ 300

Query: 301 SHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEED-ILELFETAWLMKPTVKGKG 348
           SHK II+NEE    K ++EEG+MD ESEKG+N S +N ED ILELFE+AWLMKPT+KGKG
Sbjct: 301 SHKRIINNEE----KSKEEEGVMDNESEKGNNGSRKNGEDGILELFESAWLMKPTIKGKG 357

BLAST of Clc08G17840 vs. NCBI nr
Match: XP_031736455.1 (gelsolin-related protein of 125 kDa [Cucumis sativus] >KAE8652048.1 hypothetical protein Csa_018704 [Cucumis sativus])

HSP 1 Score: 482.6 bits (1241), Expect = 2.8e-132
Identity = 277/374 (74.06%), Postives = 304/374 (81.28%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLM PLIF+LKYQ LL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQ-VLL 120
           V+ F+DDRLLA AN LEKIFPPSKLVFDKID LLHLIETFPSKFDD VDKIPCFNQ VLL
Sbjct: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120

Query: 121 LDWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVS 180
           LDWTVTH ISLL FMITILMNWGRD  REKEILVD+NYKE  NGS+S DKS+CCSE IVS
Sbjct: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180

Query: 181 SVSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDE 240
           S+SE Q+   +M+EKMKSNPMKG+Y E+LK+GTKGVLKDDEGCK+NEK      KGTRDE
Sbjct: 181 SLSEIQR--TSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEK------KGTRDE 240

Query: 241 MDD-----KDEKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDD 300
           +++     KDEKGNS  V                ENNE   AKMEESV KA+GNEEI DD
Sbjct: 241 INEKEDCKKDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDD 300

Query: 301 QSHKGIISNEENS-----EVKEEKEEGLMDYESEKGSNVSIENEED-ILELFETAWLMKP 347
           QSHK II+NEE S     E +EE+EEG+MD ESEKG+  S EN ED ILELFE+AWLMKP
Sbjct: 301 QSHKRIINNEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKP 360

BLAST of Clc08G17840 vs. NCBI nr
Match: XP_022131349.1 (uncharacterized protein LOC111004599 [Momordica charantia])

HSP 1 Score: 351.3 bits (900), Expect = 9.7e-93
Identity = 215/353 (60.91%), Postives = 251/353 (71.10%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRR PLQTCGVSF+A+AHS  SRAQ LDGRLGS TRKM+ +A +M PLIF L YQ +L
Sbjct: 1   MSSRRCPLQTCGVSFVAIAHSAISRAQVLDGRLGSTTRKMIRLANIMNPLIFALHYQFVL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
           V++F+DD  LATANI+E IFPPSKLVFDKIDDLL LIET P KFDD VDK+PCFNQV LL
Sbjct: 61  VLTFIDDGFLATANIVEXIFPPSKLVFDKIDDLLLLIETLPVKFDDAVDKLPCFNQVPLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DW V HAISLLKFMI ILMNW +DG REKEILVD+N  EGRN SESAD            
Sbjct: 121 DWAVIHAISLLKFMIAILMNWVKDGIREKEILVDMNCNEGRNASESAD------------ 180

Query: 181 VSETQQAEAAMDEKMKSNPMKG-AYKEVLKLGTKGVLKDDEGCKDNEKSTNK--VEKGTR 240
                     MDEKMKS+  K  +YKEV K G    ++ DE CK+NEK T K  +E+G +
Sbjct: 181 ----------MDEKMKSDTTKNTSYKEVQKKG----VEYDEDCKENEKGTYKKAMEEGRK 240

Query: 241 DEMDDK-DEKGNSKEVENNESQMAKMEESVEKAEGNEEIPDDQSHKGIISNEENSEVKEE 300
           + + DK D K + K+VE    + +KME SV KAEGN EI D        SN+E SE ++E
Sbjct: 241 EAVGDKADCKNDEKKVEKGIKESSKMEASVGKAEGNGEIADH-------SNKEKSEGEDE 300

Query: 301 K-EEGLMDYESEKGSNVSIENEEDILELFETAWLMKPTVKGKGNLMPRSASFV 349
           K EE  MDY  E+G    +E ++DILELFETAWLMKPT KGKGNL+PRSAS+V
Sbjct: 301 KEEEEAMDYGKEEGKKGRMEKKDDILELFETAWLMKPTGKGKGNLLPRSASYV 320

BLAST of Clc08G17840 vs. ExPASy TrEMBL
Match: A0A5A7V3D3 (Gelsolin-related protein of 125 kDa isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001510 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 8.4e-135
Identity = 274/369 (74.25%), Postives = 304/369 (82.38%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLM PLIF+LKYQ LL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
            +SF+DDRLLA  NILEK+FPP KL+FDKIDDLLHLIETFPSKFDD VD+IPCFNQVLLL
Sbjct: 61  ALSFIDDRLLAITNILEKVFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQVLLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DWTVTHAISLLK MITILMNWGRD  REKEILVD+NYKE RNGSES DKS CCSE IVSS
Sbjct: 121 DWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVSS 180

Query: 181 VSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEM 240
           +SETQ+  A+MD KMKSNPMKG+YKE+LK+G  GVLKDDE  K+NEK      KGTRDE+
Sbjct: 181 ISETQR--ASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEK------KGTRDEI 240

Query: 241 DDK-----DEKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDDQ 300
           +DK     DE GNSKEV                ENNE   A +EESV+KA+GNEEI DDQ
Sbjct: 241 NDKEDCKNDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQ 300

Query: 301 SHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEED-ILELFETAWLMKPTVKGKG 348
           SHK II+NEE    K ++EEG+MDYESEKG+N S +N+ED ILELFE+AWLMKPT+KGKG
Sbjct: 301 SHKRIINNEE----KSKEEEGVMDYESEKGNNGSRKNDEDGILELFESAWLMKPTIKGKG 357

BLAST of Clc08G17840 vs. ExPASy TrEMBL
Match: A0A1S3BAB2 (uncharacterized protein LOC103487764 OS=Cucumis melo OX=3656 GN=LOC103487764 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 2.1e-133
Identity = 274/369 (74.25%), Postives = 303/369 (82.11%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLM PLIF+LKYQ LL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
            +SF+DDRLLA ANILEKIFPP KL+FDKIDDLLHLIETFPSKFDD VD+IPCFNQVLLL
Sbjct: 61  ALSFIDDRLLAIANILEKIFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQVLLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DWTVTHAISLLK MITILMNWGRD  REKEILVD+NYKE RNGSES DKS CCSE IVSS
Sbjct: 121 DWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVSS 180

Query: 181 VSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEM 240
           +SETQ+  A+MD KMKSNPMKG+YKE+LK+G  GVLKDDE  K+NEK      KGTRD++
Sbjct: 181 ISETQR--ASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEK------KGTRDKI 240

Query: 241 DDK-----DEKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDDQ 300
           +DK     DE GNSKEV                ENNE   A +EESV+KA+GNEEI DDQ
Sbjct: 241 NDKEDCKNDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQ 300

Query: 301 SHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEED-ILELFETAWLMKPTVKGKG 348
           SHK II+NEE    K ++EEG+MD ESEKG+N S +N ED ILELFE+AWLMKPT+KGKG
Sbjct: 301 SHKRIINNEE----KSKEEEGVMDNESEKGNNGSRKNGEDGILELFESAWLMKPTIKGKG 357

BLAST of Clc08G17840 vs. ExPASy TrEMBL
Match: A0A0A0LMZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351010 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 8.8e-116
Identity = 246/341 (72.14%), Postives = 271/341 (79.47%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLM PLIF+LKYQ LL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQ-VLL 120
           V+ F+DDRLLA AN LEKIFPPSKLVFDKID LLHLIETFPSKFDD VDKIPCFNQ VLL
Sbjct: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120

Query: 121 LDWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVS 180
           LDWTVTH ISLL FMITILMNWGRD  REKEILVD+NYKE  NGS+S DKS+CCSE IVS
Sbjct: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180

Query: 181 SVSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDE 240
           S+SE Q+   +M+EKMKSNPMKG+Y E+LK+GTKGVLKDDEGCK+NEK      KGTRDE
Sbjct: 181 SLSEIQR--TSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEK------KGTRDE 240

Query: 241 MDD-----KDEKGNSKEV----------------ENNESQMAKMEESVEKAEGNEEIPDD 300
           +++     KDEKGNS  V                ENNE   AKMEESV KA+GNEEI DD
Sbjct: 241 INEKEDCKKDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDD 300

Query: 301 QSHKGIISNEENSEVKEEKEEGLMDYESEKGSNVSIENEED 320
           QSHK II+NEE S+ +EE+EE   + E E+      E EE+
Sbjct: 301 QSHKRIINNEEKSKEEEEEEEEEEEEEEEEEEEEEEEEEEE 333

BLAST of Clc08G17840 vs. ExPASy TrEMBL
Match: A0A6J1BQ09 (uncharacterized protein LOC111004599 OS=Momordica charantia OX=3673 GN=LOC111004599 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 4.7e-93
Identity = 215/353 (60.91%), Postives = 251/353 (71.10%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSSRR PLQTCGVSF+A+AHS  SRAQ LDGRLGS TRKM+ +A +M PLIF L YQ +L
Sbjct: 1   MSSRRCPLQTCGVSFVAIAHSAISRAQVLDGRLGSTTRKMIRLANIMNPLIFALHYQFVL 60

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
           V++F+DD  LATANI+E IFPPSKLVFDKIDDLL LIET P KFDD VDK+PCFNQV LL
Sbjct: 61  VLTFIDDGFLATANIVEXIFPPSKLVFDKIDDLLLLIETLPVKFDDAVDKLPCFNQVPLL 120

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           DW V HAISLLKFMI ILMNW +DG REKEILVD+N  EGRN SESAD            
Sbjct: 121 DWAVIHAISLLKFMIAILMNWVKDGIREKEILVDMNCNEGRNASESAD------------ 180

Query: 181 VSETQQAEAAMDEKMKSNPMKG-AYKEVLKLGTKGVLKDDEGCKDNEKSTNK--VEKGTR 240
                     MDEKMKS+  K  +YKEV K G    ++ DE CK+NEK T K  +E+G +
Sbjct: 181 ----------MDEKMKSDTTKNTSYKEVQKKG----VEYDEDCKENEKGTYKKAMEEGRK 240

Query: 241 DEMDDK-DEKGNSKEVENNESQMAKMEESVEKAEGNEEIPDDQSHKGIISNEENSEVKEE 300
           + + DK D K + K+VE    + +KME SV KAEGN EI D        SN+E SE ++E
Sbjct: 241 EAVGDKADCKNDEKKVEKGIKESSKMEASVGKAEGNGEIADH-------SNKEKSEGEDE 300

Query: 301 K-EEGLMDYESEKGSNVSIENEEDILELFETAWLMKPTVKGKGNLMPRSASFV 349
           K EE  MDY  E+G    +E ++DILELFETAWLMKPT KGKGNL+PRSAS+V
Sbjct: 301 KEEEEAMDYGKEEGKKGRMEKKDDILELFETAWLMKPTGKGKGNLLPRSASYV 320

BLAST of Clc08G17840 vs. ExPASy TrEMBL
Match: A0A6J1GHV9 (uncharacterized protein LOC111454325 OS=Cucurbita moschata OX=3662 GN=LOC111454325 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 211/348 (60.63%), Postives = 252/348 (72.41%), Query Frame = 0

Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKYQCLL 60
           MSS RRPL TC VSFLA+AH   SRAQNLDG LGS TRKMV I KL+KP+I VL+YQ  L
Sbjct: 12  MSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRKMVQITKLVKPVILVLQYQWSL 71

Query: 61  VVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIPCFNQVLLL 120
            +SF+DDRLLA +N +EKIFPPS+LVFDKIDD+LHL+ETFP KF D VDK+PCFNQVLLL
Sbjct: 72  FLSFIDDRLLAISNFVEKIFPPSRLVFDKIDDVLHLVETFPGKFADAVDKLPCFNQVLLL 131

Query: 121 DWTVTHAISLLKFMITILMNWGRDGTREKEILVDINYKEGRNGSESADKSECCSEAIVSS 180
           +W VTHAISLL+FMITILMN GRDGTREKEILVD+NY +GRNG ESA K    SE  +S 
Sbjct: 132 EWAVTHAISLLEFMITILMNLGRDGTREKEILVDMNYNKGRNGPESAVK----SEGTISC 191

Query: 181 VSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEKGTRDEM 240
           VSETQQ             M G+ KEV+K G +G  K+D+ CK    + N+  +G ++E 
Sbjct: 192 VSETQQ-----------GAMNGSCKEVVKTGREG--KEDD-CKG---TYNRAMEG-KEEF 251

Query: 241 DDKDEKGNSKEVENNESQMAKMEESVEKAEGNEEIPDDQSHKGIISNEENSEVKEEKEEG 300
            +K EKG++K+VE +ES  AKM    EKAEGNE         G+ S +E  +  E +EE 
Sbjct: 252 GNK-EKGSTKKVEGSESGKAKM----EKAEGNE---------GMKSKKEGVKDCEYEEE- 311

Query: 301 LMDYESEKGSNVSIENEEDILELFETAWLMKPTVKGKGNLMPRSASFV 349
                 E+GSN SI+ E+DILELFET+WLMKPT K KGNLMPRSASF+
Sbjct: 312 ------EEGSNGSIQKEDDILELFETSWLMKPTGKPKGNLMPRSASFL 316

BLAST of Clc08G17840 vs. TAIR 10
Match: AT1G67540.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-17
Identity = 81/254 (31.89%), Postives = 123/254 (48.43%), Query Frame = 0

Query: 4   RRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMKPLIFVLKY------Q 63
           RRRPL+TCG   L++     +R+Q L  +  +++  +  + KL + +IF +         
Sbjct: 10  RRRPLETCGGVILSMTRVLYTRSQTLMKKKKNLSSWL--LRKLFEFVIFFVSMTSPFHRH 69

Query: 64  CLLVVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIP-CFNQ 123
            L V+S  DD +LA  + +E  FP S  VF KI DLL ++ET P K D V+ K+P   ++
Sbjct: 70  FLAVLSVADDHILALQDAIETYFPSSSNVFVKIFDLLIIVETLPEKLDGVLKKLPSLMSR 129

Query: 124 VLLLDWTVTHAISLLKFMITILMNWGRD---GTREKEILVDINYKEGRNGSESADKSECC 183
           V  LDW + H IS L  ++ +L  W RD   GT EKEI VD ++   R+GS S ++ E  
Sbjct: 130 VAWLDWLLVHVISRLGLLVNVLGRW-RDKNKGTNEKEITVDRSF--SRSGSVSEEEEE-- 189

Query: 184 SEAIVSSVSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVE 243
                              ++      K +YKE L+ G+ G        +D   ST +  
Sbjct: 190 -------------------KRNLGTEKKVSYKEALQRGSSG--------EDGGGSTGRSS 229

Query: 244 KGTRDEMDDKDEKG 248
              RD + +  E G
Sbjct: 250 SSRRDPILELFETG 229

BLAST of Clc08G17840 vs. TAIR 10
Match: AT1G67540.1 (unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 2.8e-13
Identity = 65/193 (33.68%), Postives = 93/193 (48.19%), Query Frame = 0

Query: 59  LLVVSFVDDRLLATANILEKIFPPSKLVFDKIDDLLHLIETFPSKFDDVVDKIP-CFNQV 118
           L V+S  DD +LA  + +E  FP S  VF KI DLL ++ET P K D V+ K+P   ++V
Sbjct: 46  LAVLSVADDHILALQDAIETYFPSSSNVFVKIFDLLIIVETLPEKLDGVLKKLPSLMSRV 105

Query: 119 LLLDWTVTHAISLLKFMITILMNWGRD---GTREKEILVDINYKEGRNGSESADKSECCS 178
             LDW + H IS L  ++ +L  W RD   GT EKEI VD ++   R+GS S ++ E   
Sbjct: 106 AWLDWLLVHVISRLGLLVNVLGRW-RDKNKGTNEKEITVDRSF--SRSGSVSEEEEE--- 165

Query: 179 EAIVSSVSETQQAEAAMDEKMKSNPMKGAYKEVLKLGTKGVLKDDEGCKDNEKSTNKVEK 238
                             ++      K +YKE L+ G+ G        +D   ST +   
Sbjct: 166 ------------------KRNLGTEKKVSYKEALQRGSSG--------EDGGGSTGRSSS 206

Query: 239 GTRDEMDDKDEKG 248
             RD + +  E G
Sbjct: 226 SRRDPILELFETG 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884034.12.4e-13676.42myelin transcription factor 1 [Benincasa hispida] >XP_038884035.1 myelin transcr... [more]
KAA0061016.11.7e-13474.25gelsolin-related protein of 125 kDa isoform X1 [Cucumis melo var. makuwa][more]
XP_008444439.14.3e-13374.25PREDICTED: uncharacterized protein LOC103487764 [Cucumis melo] >XP_008444440.1 P... [more]
XP_031736455.12.8e-13274.06gelsolin-related protein of 125 kDa [Cucumis sativus] >KAE8652048.1 hypothetical... [more]
XP_022131349.19.7e-9360.91uncharacterized protein LOC111004599 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V3D38.4e-13574.25Gelsolin-related protein of 125 kDa isoform X1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3BAB22.1e-13374.25uncharacterized protein LOC103487764 OS=Cucumis melo OX=3656 GN=LOC103487764 PE=... [more]
A0A0A0LMZ28.8e-11672.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351010 PE=4 SV=1[more]
A0A6J1BQ094.7e-9360.91uncharacterized protein LOC111004599 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J1GHV91.2e-8860.63uncharacterized protein LOC111454325 OS=Cucurbita moschata OX=3662 GN=LOC1114543... [more]
Match NameE-valueIdentityDescription
AT1G67540.21.1e-1731.89unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G67540.12.8e-1333.68unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 252..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..313
NoneNo IPR availablePANTHERPTHR37710TRANSMEMBRANE PROTEINcoord: 1..339

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G17840.1Clc08G17840.1mRNA