Clc08G17300 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G17300
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	transcription factor bHLH49 isoform X1
Location	ClcChr08: 27624339 .. 27625995 (+)
RNA-Seq Expression	Clc08G17300
Synteny	Clc08G17300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGCATTTGGTTTTGCTGTCCAAATTGGGAAATGGGTGGTTCTACTTCTGGCTTTCAATGTGAAATAATGAACTGTTCTTTTGGAGTAAGCAGTCCTCAGCGATTGATTGGAGCTGACACTTCTTTTTCATCTACCTGTGGATCTTCTGCAACAACTCCTCCCTGTGAATTATCCAACTCTTTGGAGAATGAGAGAGTGAAAACCATATCCCACATTCTTCACGATCCTTCAACTTTGAGCTTTGATATGTTTGGAAGTGGGAACTTCTCAGAAATGGTGGGTTCTTTTGGCTTTCTAAATGAAGGTAACCACAGCCAGATCCCTAATATTAAGTGTCCATTTAGTTATGTGCCAAATCTGGATGAAGAAGAAACGGTCTGGCCAAAGAAAGATGTGAAGGCTTGCCTCGATTGCGTTAATGAAAATCAAAGAAAATTTGTTCTTGGTTCCAATTCTTCCAGCCCAAATAAGGTAAATTAGCTTGTAATGCTTTAGTTTGTGTGTTCATTGTATTTGCACAATGTTTGAATAAATTTTTGCATCTGTTGTTTAGAATGCTGAAGATAACTTGGATGTAGAAGCAACTGAGATCCTTAATAAAGATGAGAAAACACTGAAAGTTGAGCATAGAATGAGTGCAAATTTTTACACCAAATCAGATAGTAAACAAGCCAAAGGAGGCTCTCAAAGTGTACAAGCTCCCCAGGAGAATTATATTCACGTTCAAGCGCGACGGGGCCGAGCTACTAATAACCATAGTCTCGCAGAAAGGGTACCTTATTTCTTGTATGCATAAAAACCTTTTGGAACAAATTCAATGCTTTATATTTCGTTAAAGCTTTCAGACTCGATCGTGGCAGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTGCTGCAAGATCTTGTTCCTGGATGCAATCAGGTCATTGCAGATATTGACAATCAAGTCATAATCCTAACTGCAACTACCATGTCGTCGCTTTCATATAAAATCTTGTTTACTATTTCAGATTACCGGGAGAACCGTGGTGCTCGACGAAATTATTAACTATGTACAATCACTGCAACAACAGGTTGAGGTATGCTAGTTTGCAGCCTTAATGGTTTTTTGAAAATTGCCTTGAATCTTGACAATGAACTTGACTTAGTGGAACTTTAGTTGCGAATTGTGAGTGATCTCTGCCAATAAACTGTAAGACCCCTAATCGAAACTTTGACTTCTTACTTTGCAGTTTCTATCGATGAAACTTGCAAATGTCGGTCCAGAATCAAGCTTGGATACGGAGCAAATTCTGCTCACAAATGTAAGTTTCTAAGGTGATATCTTGAATGCTTCAGAACTTGATCTCTTTTCATCCATTCTGATCTGTTTACAATGATTCAGAACTCGTACATTTCGTCATCGAATATTCTTCGTACACGAGGCAAAGGCGTCGACAGCGTCCTTGCTATTGATCCTAGATTAACAACATCTCACACAATTCCTCATGTCATGTTTCAACTTCATGGAACAGTACCAACCATGCCAAAAACTACATCTCAGCAACTTTCTAGCCTTTCCAAAGTAAGTTCAAGATCTTCAAAAGAAACCATTTCTCTTTCCTTTTACAACGACATTATCGAATCCATTTACGTGCAGATGAAATGA

mRNA sequence

GTTTTTGCATTTGGTTTTGCTGTCCAAATTGGGAAATGGGTGGTTCTACTTCTGGCTTTCAATGTGAAATAATGAACTGTTCTTTTGGAGTAAGCAGTCCTCAGCGATTGATTGGAGCTGACACTTCTTTTTCATCTACCTGTGGATCTTCTGCAACAACTCCTCCCTGTGAATTATCCAACTCTTTGGAGAATGAGAGAGTGAAAACCATATCCCACATTCTTCACGATCCTTCAACTTTGAGCTTTGATATGTTTGGAAGTGGGAACTTCTCAGAAATGGTGGGTTCTTTTGGCTTTCTAAATGAAGGTAACCACAGCCAGATCCCTAATATTAAGTGTCCATTTAGTTATGTGCCAAATCTGGATGAAGAAGAAACGGTCTGGCCAAAGAAAGATGTGAAGGCTTGCCTCGATTGCGTTAATGAAAATCAAAGAAAATTTGTTCTTGGTTCCAATTCTTCCAGCCCAAATAAGAATGCTGAAGATAACTTGGATGTAGAAGCAACTGAGATCCTTAATAAAGATGAGAAAACACTGAAAGTTGAGCATAGAATGAGTGCAAATTTTTACACCAAATCAGATAGTAAACAAGCCAAAGGAGGCTCTCAAAGTGTACAAGCTCCCCAGGAGAATTATATTCACGTTCAAGCGCGACGGGGCCGAGCTACTAATAACCATAGTCTCGCAGAAAGGACTCGATCGTGGCAGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTGCTGCAAGATCTTGTTCCTGGATGCAATCAGATTACCGGGAGAACCGTGGTGCTCGACGAAATTATTAACTATGTACAATCACTGCAACAACAGGTTGAGTTTCTATCGATGAAACTTGCAAATGTCGGTCCAGAATCAAGCTTGGATACGGAGCAAATTCTGCTCACAAATAACTCGTACATTTCGTCATCGAATATTCTTCGTACACGAGGCAAAGGCGTCGACAGCGTCCTTGCTATTGATCCTAGATTAACAACATCTCACACAATTCCTCATGTCATGTTTCAACTTCATGGAACAGTACCAACCATGCCAAAAACTACATCTCAGCAACTTTCTAGCCTTTCCAAAGTAAGTTCAAGATCTTCAAAAGAAACCATTTCTCTTTCCTTTTACAACGACATTATCGAATCCATTTACGTGCAGATGAAATGA

Coding sequence (CDS)

ATGGGTGGTTCTACTTCTGGCTTTCAATGTGAAATAATGAACTGTTCTTTTGGAGTAAGCAGTCCTCAGCGATTGATTGGAGCTGACACTTCTTTTTCATCTACCTGTGGATCTTCTGCAACAACTCCTCCCTGTGAATTATCCAACTCTTTGGAGAATGAGAGAGTGAAAACCATATCCCACATTCTTCACGATCCTTCAACTTTGAGCTTTGATATGTTTGGAAGTGGGAACTTCTCAGAAATGGTGGGTTCTTTTGGCTTTCTAAATGAAGGTAACCACAGCCAGATCCCTAATATTAAGTGTCCATTTAGTTATGTGCCAAATCTGGATGAAGAAGAAACGGTCTGGCCAAAGAAAGATGTGAAGGCTTGCCTCGATTGCGTTAATGAAAATCAAAGAAAATTTGTTCTTGGTTCCAATTCTTCCAGCCCAAATAAGAATGCTGAAGATAACTTGGATGTAGAAGCAACTGAGATCCTTAATAAAGATGAGAAAACACTGAAAGTTGAGCATAGAATGAGTGCAAATTTTTACACCAAATCAGATAGTAAACAAGCCAAAGGAGGCTCTCAAAGTGTACAAGCTCCCCAGGAGAATTATATTCACGTTCAAGCGCGACGGGGCCGAGCTACTAATAACCATAGTCTCGCAGAAAGGACTCGATCGTGGCAGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTGCTGCAAGATCTTGTTCCTGGATGCAATCAGATTACCGGGAGAACCGTGGTGCTCGACGAAATTATTAACTATGTACAATCACTGCAACAACAGGTTGAGTTTCTATCGATGAAACTTGCAAATGTCGGTCCAGAATCAAGCTTGGATACGGAGCAAATTCTGCTCACAAATAACTCGTACATTTCGTCATCGAATATTCTTCGTACACGAGGCAAAGGCGTCGACAGCGTCCTTGCTATTGATCCTAGATTAACAACATCTCACACAATTCCTCATGTCATGTTTCAACTTCATGGAACAGTACCAACCATGCCAAAAACTACATCTCAGCAACTTTCTAGCCTTTCCAAAGTAAGTTCAAGATCTTCAAAAGAAACCATTTCTCTTTCCTTTTACAACGACATTATCGAATCCATTTACGTGCAGATGAAATGA

Protein sequence

MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSNSLENERVKTISHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPKKDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFYTKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISSSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTSQQLSSLSKVSSRSSKETISLSFYNDIIESIYVQMK

Homology

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BLAST of Clc08G17300 vs. NCBI nr
Match: XP_038885625.1 (transcription factor bHLH74-like isoform X1 [Benincasa hispida])

HSP 1 Score: 547.7 bits (1410), Expect = 7.7e-152
Identity = 291/355 (81.97%), Postives = 314/355 (88.45%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSNSLENERVKTIS 60
           MGGS SGFQCEIM CSF VSSPQ LIGADTSFSST GSSAT P CELS SLENE V+TIS
Sbjct: 1   MGGSISGFQCEIMKCSFEVSSPQPLIGADTSFSSTFGSSATPPLCELSTSLENEGVQTIS 60

Query: 61  HILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPKK 120
           H+LHDPS+LSFDMFGSGNFSEMVGSFGFL EG+HSQIP IKCP SYV NLDE +T+ PK 
Sbjct: 61  HLLHDPSSLSFDMFGSGNFSEMVGSFGFLTEGDHSQIPKIKCPLSYVSNLDEGQTISPKN 120

Query: 121 DVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFYT 180
           D KA LDCVNEN+RK VLGSNSSSPNKN ED  +VE T ILNK++KTLKVEHRMSANF T
Sbjct: 121 DAKARLDCVNENRRKLVLGSNSSSPNKNVEDYFNVEPTNILNKNDKTLKVEHRMSANFNT 180

Query: 181 KSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQD 240
           KSDSKQAKGGSQ VQAP+ENYI VQ RR RAT NHSLAER     VRREKI+ERMKLLQ+
Sbjct: 181 KSDSKQAKGGSQCVQAPKENYIRVQVRRVRAT-NHSLAER-----VRREKINERMKLLQE 240

Query: 241 LVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISS 300
           LVPGCNQITG+TVVLD IINYVQSLQQQVEFLSMKLANVGPES+LDTE+ILLTNNSYISS
Sbjct: 241 LVPGCNQITGKTVVLDTIINYVQSLQQQVEFLSMKLANVGPESNLDTEKILLTNNSYISS 300

Query: 301 SNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTSQQLSSLSKV 356
            NILRT+ +G+D+VLAIDPRLTTSHT PHVMF LHGT+PT+PKTTSQQLSSL K+
Sbjct: 301 PNILRTQDEGIDNVLAIDPRLTTSHTTPHVMFHLHGTMPTIPKTTSQQLSSLFKM 349

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BLAST of Clc08G17300 vs. NCBI nr
Match: XP_008444519.1 (PREDICTED: transcription factor bHLH49 isoform X1 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 1.3e-138
Identity = 276/347 (79.54%), Postives = 297/347 (85.59%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSN-SLENERVKTI 60
           M GSTSGFQCEIM CSFGVSS Q LIG DTSFSST GSS+TTP CELS  SLENE VKTI
Sbjct: 1   MAGSTSGFQCEIMKCSFGVSSSQPLIGVDTSFSSTLGSSSTTPLCELSTASLENEGVKTI 60

Query: 61  SHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPK 120
           S++LHDPSTLSFDMFGSGNFS+MVGS GFL E +HSQI NIKCPFSYV  LD+EE V PK
Sbjct: 61  SNLLHDPSTLSFDMFGSGNFSDMVGSLGFLTEADHSQIANIKCPFSYVQILDDEEMVSPK 120

Query: 121 KDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFY 180
            DVK+  D VNENQRKFV+GSNSSSPNKNAEDNL+V  TEILNK +KT KVEHRMSANF 
Sbjct: 121 NDVKSQPDRVNENQRKFVVGSNSSSPNKNAEDNLNVATTEILNKADKTQKVEHRMSANFN 180

Query: 181 TKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQ 240
           TKSDSKQAKGGSQ+VQ+P+ENYI VQARRGRA NNHSLAER     VRREKISERMKLLQ
Sbjct: 181 TKSDSKQAKGGSQNVQSPKENYIRVQARRGRAANNHSLAER-----VRREKISERMKLLQ 240

Query: 241 DLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYIS 300
            LVPGC+QITG+TVVLDEIINYVQSLQQQVEFLSMKLANVG ESSL+TEQILLTNNSY+S
Sbjct: 241 QLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLANVGLESSLETEQILLTNNSYLS 300

Query: 301 SSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
           SSN+L  RG+ V+     D R  T HT PHVMFQL+GT PTMPKTTS
Sbjct: 301 SSNVLCKRGENVN-----DHRSRTFHTSPHVMFQLYGTRPTMPKTTS 337

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BLAST of Clc08G17300 vs. NCBI nr
Match: KAA0060972.1 (transcription factor bHLH49 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 503.4 bits (1295), Expect = 1.7e-138
Identity = 276/347 (79.54%), Postives = 297/347 (85.59%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSN-SLENERVKTI 60
           M GSTSGFQCEIM CSFGVSS Q LIG DTSFSST GSS+TTP CELS  SLENE VKTI
Sbjct: 1   MAGSTSGFQCEIMKCSFGVSSSQPLIGVDTSFSSTLGSSSTTPLCELSTASLENEGVKTI 60

Query: 61  SHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPK 120
           S++LHDPSTLSFDMFGSGNFS+MVGS GFL E +HSQI NIKCPFSYV  LD+EE V PK
Sbjct: 61  SNLLHDPSTLSFDMFGSGNFSDMVGSLGFLTEADHSQIANIKCPFSYVQILDDEEMVSPK 120

Query: 121 KDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFY 180
            DVK+  D VNENQRKFV+GSNSSSPNKNAEDNL+V  TEILNK +KT KVEHRMSANF 
Sbjct: 121 NDVKSQPDRVNENQRKFVVGSNSSSPNKNAEDNLNVAPTEILNKADKTQKVEHRMSANFN 180

Query: 181 TKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQ 240
           TKSDSKQAKGGSQ+VQ+P+ENYI VQARRGRA NNHSLAER     VRREKISERMKLLQ
Sbjct: 181 TKSDSKQAKGGSQNVQSPKENYIRVQARRGRAANNHSLAER-----VRREKISERMKLLQ 240

Query: 241 DLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYIS 300
            LVPGC+QITG+TVVLDEIINYVQSLQQQVEFLSMKLANVG ESSL+TEQILLTNNSY+S
Sbjct: 241 QLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLANVGLESSLETEQILLTNNSYLS 300

Query: 301 SSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
           SSN+L  RG+ V+     D R  T HT PHVMFQL+GT PTMPKTTS
Sbjct: 301 SSNVLCKRGENVN-----DHRSRTFHTSPHVMFQLYGTRPTMPKTTS 337

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BLAST of Clc08G17300 vs. NCBI nr
Match: XP_004143033.1 (transcription factor bHLH49 [Cucumis sativus] >KGN62422.1 hypothetical protein Csa_018610 [Cucumis sativus])

HSP 1 Score: 499.2 bits (1284), Expect = 3.1e-137
Identity = 270/347 (77.81%), Postives = 295/347 (85.01%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSN-SLENERVKTI 60
           M GSTSGFQCE M CSFGVSS Q LIG DTSFSST GSS+TTP CELS  SLENE VKTI
Sbjct: 1   MAGSTSGFQCETMKCSFGVSSSQPLIGVDTSFSSTLGSSSTTPLCELSTASLENEGVKTI 60

Query: 61  SHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPK 120
           S+ILHDPSTLSFDMFG+GNFS+MVGSFGFL E +HSQI NIKCPFSYV  LD+EE V PK
Sbjct: 61  SNILHDPSTLSFDMFGTGNFSDMVGSFGFLTEADHSQIANIKCPFSYVQILDDEEMVSPK 120

Query: 121 KDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFY 180
            D K+  DCV+ENQRKFVLGSNSSSPNKNAEDN +VE TEIL+K +KT KVEHR+SANF 
Sbjct: 121 NDAKSRPDCVSENQRKFVLGSNSSSPNKNAEDNFNVEPTEILDKADKTQKVEHRLSANFN 180

Query: 181 TKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQ 240
           TK DSK+AKGGSQ+VQAP+ENYIHVQARRGRA NNHSLAER     VRREKISERMKLLQ
Sbjct: 181 TKPDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAER-----VRREKISERMKLLQ 240

Query: 241 DLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYIS 300
            LVPGC+QITG+TVVLDEIINYVQSLQQQVEFLSMKLA+VG ESSL+ EQILLTNNSY+S
Sbjct: 241 QLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLASVGLESSLEAEQILLTNNSYLS 300

Query: 301 SSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
           SSN+L  RG+ V+     DPR    HT PHV FQL+GT PTMP+TTS
Sbjct: 301 SSNVLCKRGENVN-----DPRSRIIHTSPHVTFQLYGTTPTMPRTTS 337

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BLAST of Clc08G17300 vs. NCBI nr
Match: XP_038885626.1 (uncharacterized protein LOC120075945 isoform X2 [Benincasa hispida])

HSP 1 Score: 436.0 bits (1120), Expect = 3.3e-118
Identity = 244/357 (68.35%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSNSLENERVKTIS 60
           MGGS SGFQCEIM CSF VSSPQ LIGADTSFSST GSSAT P CELS SLENE V+TIS
Sbjct: 1   MGGSISGFQCEIMKCSFEVSSPQPLIGADTSFSSTFGSSATPPLCELSTSLENEGVQTIS 60

Query: 61  HILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPKK 120
           H+LHDPS+LSFDMFGSGNFSEMVGSFGFL EG+HSQIP IKCP SYV NLDE +T+ PK 
Sbjct: 61  HLLHDPSSLSFDMFGSGNFSEMVGSFGFLTEGDHSQIPKIKCPLSYVSNLDEGQTISPKN 120

Query: 121 DVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSAN--F 180
           D KA LDCVNEN+RK VLGSNSSSPNK            I+NK ++ L V +++     F
Sbjct: 121 DAKARLDCVNENRRKLVLGSNSSSPNK------------IVNKPKEALNV-YKLPRRIIF 180

Query: 181 YTKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLL 240
             K D  +         A Q+ Y+ +                     VRREKI+ERMKLL
Sbjct: 181 VFKYDESEL-----LTIASQKGYLIL---------------------VRREKINERMKLL 240

Query: 241 QDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYI 300
           Q+LVPGCNQITG+TVVLD IINYVQSLQQQVEFLSMKLANVGPES+LDTE+ILLTNNSYI
Sbjct: 241 QELVPGCNQITGKTVVLDTIINYVQSLQQQVEFLSMKLANVGPESNLDTEKILLTNNSYI 300

Query: 301 SSSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTSQQLSSLSKV 356
           SS NILRT+ +G+D+VLAIDPRLTTSHT PHVMF LHGT+PT+PKTTSQQLSSL K+
Sbjct: 301 SSPNILRTQDEGIDNVLAIDPRLTTSHTTPHVMFHLHGTMPTIPKTTSQQLSSLFKM 318

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BLAST of Clc08G17300 vs. ExPASy Swiss-Prot
Match: Q6NKN9 (Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.7e-33
Identity = 101/234 (43.16%), Postives = 146/234 (62.39%), Query Frame = 0


Query: 137 VLGSNSSSPNK--NAEDNLDVEATEILNKDEKTLKVEHRMSANFYTKSDSKQA--KGGSQ 196
           VLG++     +   AE   + +A E   +D +     +  S   +    SK+   K  SQ
Sbjct: 138 VLGASPVGKRRLPEAESQWNKKAVEEFQEDPQR---GNDQSQKKHKNDQSKETVNKESSQ 197

Query: 197 SVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCNQITGRT 256
           S +AP+ENYIH++ARRG+ATN+HSLAER     VRREKISERM+LLQ+LVPGCN+ITG+ 
Sbjct: 198 SEEAPKENYIHMRARRGQATNSHSLAER-----VRREKISERMRLLQELVPGCNKITGKA 257

Query: 257 VVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISSSNILRTRGKGVD 316
           V+LDEIINYVQSLQQQVEFLSMKLA V PE ++D ++IL        + ++L++R +   
Sbjct: 258 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRIL--------AKDLLQSRDRNTP 317

Query: 317 SVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTT-SQQLSSLSKVSSRSSKETIS 366
           + L ++P       IP++    +     +P+TT   +L +L ++   S+  T+S
Sbjct: 318 T-LGLNPFAGFQGNIPNLSATTNPQYNPLPQTTLESELQNLYQMGFVSNPSTMS 354

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BLAST of Clc08G17300 vs. ExPASy Swiss-Prot
Match: Q9CAA9 (Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.2e-31
Identity = 110/315 (34.92%), Postives = 157/315 (49.84%), Query Frame = 0


Query: 71  FDMFGSGNFSEMVG-------SFGFLNEGN-------HSQIPNIKCPFSYVPNLDEEETV 130
           F +F  GNFS+MV        + G   +G         S   N+  P + V    +E TV
Sbjct: 139 FSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNVGEPHNDVSVAVKESTV 198

Query: 131 WPKKDVKACL-----------DCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDE 190
              +  K  +                 Q+     SN+    +N + N +   +    + E
Sbjct: 199 RSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSE 258

Query: 191 K------TLKVEHRMSANFYTKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAE 250
           +        K     S N   K  +   + G QS   P++ YIHV+ARRG+ATN+HSLAE
Sbjct: 259 EEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAE 318

Query: 251 RTRSWQVRREKISERMKLLQDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANV 310
           R     VRREKISERMK LQDLVPGCN++TG+ V+LDEIINYVQSLQ+QVEFLSMKLA V
Sbjct: 319 R-----VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 378

Query: 311 GPESSLDTEQILLTNNSYISSSNILRTRGKGVDSVLAIDPRLTTSH-TIPHVMFQLHGTV 354
            P+   + E +L        + + L+ R  G  S     P ++ ++  +PH   Q   T+
Sbjct: 379 NPQMDFNLEGLL--------AKDALQLRA-GSSSTTPFPPNMSMAYPPLPHGFMQ--QTL 437

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BLAST of Clc08G17300 vs. ExPASy Swiss-Prot
Match: Q9LK48 (Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-27
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 175 SANFYTKSDSK-QAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISE 234
           S N   K DSK   K  ++  +AP++ YIHV+ARRG+AT++HSLAER      RREKISE
Sbjct: 162 SKNGVEKCDSKGDNKDDAKPPEAPKD-YIHVRARRGQATDSHSLAER-----ARREKISE 221

Query: 235 RMKLLQDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGP------ESSLDT 291
           RM LLQDLVPGCN+ITG+ V+LDEIINYVQSLQ+QVEFLSMKLA V P       +SL T
Sbjct: 222 RMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLST 278

[Close]

BLAST of Clc08G17300 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 79/161 (49.07%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 156 EATEILNKDEKTLKVEHRMSANFYTK-------SDSKQAK-----GGSQSVQAPQENYIH 215
           E++  L++  KT   ++  SA   +K       SD K+ K     G       P ++YIH
Sbjct: 198 ESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIH 257

Query: 216 VQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCNQITGRTVVLDEIINYVQ 275
           V+ARRG+AT++HSLAER     VRREKISERMKLLQDLVPGCN++TG+ ++LDEIINYVQ
Sbjct: 258 VRARRGQATDSHSLAER-----VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQ 317

Query: 276 SLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISSSNIL 305
           SLQ+QVEFLSMKL++V      + +  LL+ + + SS+N++
Sbjct: 318 SLQRQVEFLSMKLSSVNTRLDFNMD-ALLSKDIFPSSNNLM 352

[Close]

BLAST of Clc08G17300 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 0


Query: 127 DCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFYTKSDSKQ 186
           DC NE ++K  +  +        E +   E      K  K +K + +   N ++   SK 
Sbjct: 102 DC-NEKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKV 161

Query: 187 AKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCN 246
            K      +  + +YIHV+ARRG+AT++HS+AER     VRREKISERMK LQDLVPGC+
Sbjct: 162 TK------ELEKTDYIHVRARRGQATDSHSIAER-----VRREKISERMKFLQDLVPGCD 221

Query: 247 QITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQI 291
           +ITG+  +LDEIINYVQSLQ+Q+EFLSMKLA V P    D + I
Sbjct: 222 KITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDI 253

[Close]

BLAST of Clc08G17300 vs. ExPASy TrEMBL
Match: A0A1S3BA09 (transcription factor bHLH49 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487812 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 6.2e-139
Identity = 276/347 (79.54%), Postives = 297/347 (85.59%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSN-SLENERVKTI 60
           M GSTSGFQCEIM CSFGVSS Q LIG DTSFSST GSS+TTP CELS  SLENE VKTI
Sbjct: 1   MAGSTSGFQCEIMKCSFGVSSSQPLIGVDTSFSSTLGSSSTTPLCELSTASLENEGVKTI 60

Query: 61  SHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPK 120
           S++LHDPSTLSFDMFGSGNFS+MVGS GFL E +HSQI NIKCPFSYV  LD+EE V PK
Sbjct: 61  SNLLHDPSTLSFDMFGSGNFSDMVGSLGFLTEADHSQIANIKCPFSYVQILDDEEMVSPK 120

Query: 121 KDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFY 180
            DVK+  D VNENQRKFV+GSNSSSPNKNAEDNL+V  TEILNK +KT KVEHRMSANF 
Sbjct: 121 NDVKSQPDRVNENQRKFVVGSNSSSPNKNAEDNLNVATTEILNKADKTQKVEHRMSANFN 180

Query: 181 TKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQ 240
           TKSDSKQAKGGSQ+VQ+P+ENYI VQARRGRA NNHSLAER     VRREKISERMKLLQ
Sbjct: 181 TKSDSKQAKGGSQNVQSPKENYIRVQARRGRAANNHSLAER-----VRREKISERMKLLQ 240

Query: 241 DLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYIS 300
            LVPGC+QITG+TVVLDEIINYVQSLQQQVEFLSMKLANVG ESSL+TEQILLTNNSY+S
Sbjct: 241 QLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLANVGLESSLETEQILLTNNSYLS 300

Query: 301 SSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
           SSN+L  RG+ V+     D R  T HT PHVMFQL+GT PTMPKTTS
Sbjct: 301 SSNVLCKRGENVN-----DHRSRTFHTSPHVMFQLYGTRPTMPKTTS 337

[Close]

BLAST of Clc08G17300 vs. ExPASy TrEMBL
Match: A0A5A7UYJ9 (Transcription factor bHLH49 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001070 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 8.1e-139
Identity = 276/347 (79.54%), Postives = 297/347 (85.59%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSN-SLENERVKTI 60
           M GSTSGFQCEIM CSFGVSS Q LIG DTSFSST GSS+TTP CELS  SLENE VKTI
Sbjct: 1   MAGSTSGFQCEIMKCSFGVSSSQPLIGVDTSFSSTLGSSSTTPLCELSTASLENEGVKTI 60

Query: 61  SHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPK 120
           S++LHDPSTLSFDMFGSGNFS+MVGS GFL E +HSQI NIKCPFSYV  LD+EE V PK
Sbjct: 61  SNLLHDPSTLSFDMFGSGNFSDMVGSLGFLTEADHSQIANIKCPFSYVQILDDEEMVSPK 120

Query: 121 KDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFY 180
            DVK+  D VNENQRKFV+GSNSSSPNKNAEDNL+V  TEILNK +KT KVEHRMSANF 
Sbjct: 121 NDVKSQPDRVNENQRKFVVGSNSSSPNKNAEDNLNVAPTEILNKADKTQKVEHRMSANFN 180

Query: 181 TKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQ 240
           TKSDSKQAKGGSQ+VQ+P+ENYI VQARRGRA NNHSLAER     VRREKISERMKLLQ
Sbjct: 181 TKSDSKQAKGGSQNVQSPKENYIRVQARRGRAANNHSLAER-----VRREKISERMKLLQ 240

Query: 241 DLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYIS 300
            LVPGC+QITG+TVVLDEIINYVQSLQQQVEFLSMKLANVG ESSL+TEQILLTNNSY+S
Sbjct: 241 QLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLANVGLESSLETEQILLTNNSYLS 300

Query: 301 SSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
           SSN+L  RG+ V+     D R  T HT PHVMFQL+GT PTMPKTTS
Sbjct: 301 SSNVLCKRGENVN-----DHRSRTFHTSPHVMFQLYGTRPTMPKTTS 337

[Close]

BLAST of Clc08G17300 vs. ExPASy TrEMBL
Match: A0A0A0LNP9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G353500 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.5e-137
Identity = 270/347 (77.81%), Postives = 295/347 (85.01%), Query Frame = 0


Query: 1   MGGSTSGFQCEIMNCSFGVSSPQRLIGADTSFSSTCGSSATTPPCELSN-SLENERVKTI 60
           M GSTSGFQCE M CSFGVSS Q LIG DTSFSST GSS+TTP CELS  SLENE VKTI
Sbjct: 1   MAGSTSGFQCETMKCSFGVSSSQPLIGVDTSFSSTLGSSSTTPLCELSTASLENEGVKTI 60

Query: 61  SHILHDPSTLSFDMFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPK 120
           S+ILHDPSTLSFDMFG+GNFS+MVGSFGFL E +HSQI NIKCPFSYV  LD+EE V PK
Sbjct: 61  SNILHDPSTLSFDMFGTGNFSDMVGSFGFLTEADHSQIANIKCPFSYVQILDDEEMVSPK 120

Query: 121 KDVKACLDCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFY 180
            D K+  DCV+ENQRKFVLGSNSSSPNKNAEDN +VE TEIL+K +KT KVEHR+SANF 
Sbjct: 121 NDAKSRPDCVSENQRKFVLGSNSSSPNKNAEDNFNVEPTEILDKADKTQKVEHRLSANFN 180

Query: 181 TKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQ 240
           TK DSK+AKGGSQ+VQAP+ENYIHVQARRGRA NNHSLAER     VRREKISERMKLLQ
Sbjct: 181 TKPDSKKAKGGSQNVQAPKENYIHVQARRGRAANNHSLAER-----VRREKISERMKLLQ 240

Query: 241 DLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYIS 300
            LVPGC+QITG+TVVLDEIINYVQSLQQQVEFLSMKLA+VG ESSL+ EQILLTNNSY+S
Sbjct: 241 QLVPGCHQITGKTVVLDEIINYVQSLQQQVEFLSMKLASVGLESSLEAEQILLTNNSYLS 300

Query: 301 SSNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
           SSN+L  RG+ V+     DPR    HT PHV FQL+GT PTMP+TTS
Sbjct: 301 SSNVLCKRGENVN-----DPRSRIIHTSPHVTFQLYGTTPTMPRTTS 337

[Close]

BLAST of Clc08G17300 vs. ExPASy TrEMBL
Match: A0A1S4DVD5 (transcription factor bHLH74 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487812 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 2.4e-106
Identity = 216/274 (78.83%), Postives = 234/274 (85.40%), Query Frame = 0


Query: 73  MFGSGNFSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPKKDVKACLDCVNEN 132
           MFGSGNFS+MVGS GFL E +HSQI NIKCPFSYV  LD+EE V PK DVK+  D VNEN
Sbjct: 1   MFGSGNFSDMVGSLGFLTEADHSQIANIKCPFSYVQILDDEEMVSPKNDVKSQPDRVNEN 60

Query: 133 QRKFVLGSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFYTKSDSKQAKGGSQ 192
           QRKFV+GSNSSSPNKNAEDNL+V  TEILNK +KT KVEHRMSANF TKSDSKQAKGGSQ
Sbjct: 61  QRKFVVGSNSSSPNKNAEDNLNVATTEILNKADKTQKVEHRMSANFNTKSDSKQAKGGSQ 120

Query: 193 SVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCNQITGRT 252
           +VQ+P+ENYI VQARRGRA NNHSLAER     VRREKISERMKLLQ LVPGC+QITG+T
Sbjct: 121 NVQSPKENYIRVQARRGRAANNHSLAER-----VRREKISERMKLLQQLVPGCHQITGKT 180

Query: 253 VVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISSSNILRTRGKGVD 312
           VVLDEIINYVQSLQQQVEFLSMKLANVG ESSL+TEQILLTNNSY+SSSN+L  RG+ V+
Sbjct: 181 VVLDEIINYVQSLQQQVEFLSMKLANVGLESSLETEQILLTNNSYLSSSNVLCKRGENVN 240

Query: 313 SVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTS 347
                D R  T HT PHVMFQL+GT PTMPKTTS
Sbjct: 241 -----DHRSRTFHTSPHVMFQLYGTRPTMPKTTS 264

[Close]

BLAST of Clc08G17300 vs. ExPASy TrEMBL
Match: A0A6P6GAR5 (transcription factor bHLH74 isoform X3 OS=Ziziphus jujuba OX=326968 GN=LOC107420637 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-52
Identity = 159/350 (45.43%), Postives = 203/350 (58.00%), Query Frame = 0


Query: 31  SFSSTCGSSATTPPCELSNS-----LENERVKTISHILHDPSTLSF-------DMFGSGN 90
           S S   G S+     ELSN      LEN+ + + SH++  PS  SF         FGSG+
Sbjct: 67  SQSENFGDSSMVSHGELSNPPYPVVLENQGMNSTSHLVQYPSDSSFVEMVPKLPCFGSGS 126

Query: 91  FSEMVGSFGFLNEGNHSQIPNIKCPFSYVPNLDEEETVWPKKDVKACLDCVNENQ----- 150
           FSEMVGSFG       S I N  CP  Y   L +E+       + A      E +     
Sbjct: 127 FSEMVGSFGL---AECSGIANTGCPPKY--TLHKEKATERASPIGAQSHDGRETEDGGIG 186

Query: 151 -------RKFVLGSNSS-SPNKNAE----DNLDVEATEIL-NKDEKTLKVEHRMSANFYT 210
                  RK  L S+S  SPNKNAE     +L  E+++++ + +EK  K E   S N   
Sbjct: 187 SSSSGKRRKRALDSSSPFSPNKNAEGEQHKDLSGESSDVMKDHEEKKHKAEENTSGNIRN 246

Query: 211 KSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQD 270
           K   KQ+K  S S +AP+ENYIHV+ARRG+ATN+HSLAER     VRREKISERM+LLQ+
Sbjct: 247 KQTGKQSKDSSHSEEAPKENYIHVRARRGQATNSHSLAER-----VRREKISERMRLLQE 306

Query: 271 LVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISS 330
           LVPGCN+ITG+ V+LDEIINYVQSLQQQVEFLSMKLA V PE ++D E+IL        S
Sbjct: 307 LVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDIERIL--------S 366

Query: 331 SNILRTRGKGVDSVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTTSQQLS 351
            +IL +RG G  ++    P + +S    H +FQ  GT+PT+P T+ Q  S
Sbjct: 367 KDILNSRG-GNGAIFGFGPGINSSQPYQHGIFQ--GTLPTVPSTSPQYTS 395

[Close]

BLAST of Clc08G17300 vs. TAIR 10
Match: AT1G10120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-34
Identity = 101/234 (43.16%), Postives = 146/234 (62.39%), Query Frame = 0


Query: 137 VLGSNSSSPNK--NAEDNLDVEATEILNKDEKTLKVEHRMSANFYTKSDSKQA--KGGSQ 196
           VLG++     +   AE   + +A E   +D +     +  S   +    SK+   K  SQ
Sbjct: 138 VLGASPVGKRRLPEAESQWNKKAVEEFQEDPQR---GNDQSQKKHKNDQSKETVNKESSQ 197

Query: 197 SVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCNQITGRT 256
           S +AP+ENYIH++ARRG+ATN+HSLAER     VRREKISERM+LLQ+LVPGCN+ITG+ 
Sbjct: 198 SEEAPKENYIHMRARRGQATNSHSLAER-----VRREKISERMRLLQELVPGCNKITGKA 257

Query: 257 VVLDEIINYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISSSNILRTRGKGVD 316
           V+LDEIINYVQSLQQQVEFLSMKLA V PE ++D ++IL        + ++L++R +   
Sbjct: 258 VMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRIL--------AKDLLQSRDRNTP 317

Query: 317 SVLAIDPRLTTSHTIPHVMFQLHGTVPTMPKTT-SQQLSSLSKVSSRSSKETIS 366
           + L ++P       IP++    +     +P+TT   +L +L ++   S+  T+S
Sbjct: 318 T-LGLNPFAGFQGNIPNLSATTNPQYNPLPQTTLESELQNLYQMGFVSNPSTMS 354

[Close]

BLAST of Clc08G17300 vs. TAIR 10
Match: AT1G68920.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-32
Identity = 110/315 (34.92%), Postives = 157/315 (49.84%), Query Frame = 0


Query: 71  FDMFGSGNFSEMVG-------SFGFLNEGN-------HSQIPNIKCPFSYVPNLDEEETV 130
           F +F  GNFS+MV        + G   +G         S   N+  P + V    +E TV
Sbjct: 139 FSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNVGEPHNDVSVAVKESTV 198

Query: 131 WPKKDVKACL-----------DCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDE 190
              +  K  +                 Q+     SN+    +N + N +   +    + E
Sbjct: 199 RSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSE 258

Query: 191 K------TLKVEHRMSANFYTKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAE 250
           +        K     S N   K  +   + G QS   P++ YIHV+ARRG+ATN+HSLAE
Sbjct: 259 EEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAE 318

Query: 251 RTRSWQVRREKISERMKLLQDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANV 310
           R     VRREKISERMK LQDLVPGCN++TG+ V+LDEIINYVQSLQ+QVEFLSMKLA V
Sbjct: 319 R-----VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 378

Query: 311 GPESSLDTEQILLTNNSYISSSNILRTRGKGVDSVLAIDPRLTTSH-TIPHVMFQLHGTV 354
            P+   + E +L        + + L+ R  G  S     P ++ ++  +PH   Q   T+
Sbjct: 379 NPQMDFNLEGLL--------AKDALQLRA-GSSSTTPFPPNMSMAYPPLPHGFMQ--QTL 437

[Close]

BLAST of Clc08G17300 vs. TAIR 10
Match: AT1G68920.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-32
Identity = 110/315 (34.92%), Postives = 157/315 (49.84%), Query Frame = 0


Query: 71  FDMFGSGNFSEMVG-------SFGFLNEGN-------HSQIPNIKCPFSYVPNLDEEETV 130
           F +F  GNFS+MV        + G   +G         S   N+  P + V    +E TV
Sbjct: 139 FSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNVGEPHNDVSVAVKESTV 198

Query: 131 WPKKDVKACL-----------DCVNENQRKFVLGSNSSSPNKNAEDNLDVEATEILNKDE 190
              +  K  +                 Q+     SN+    +N + N +   +    + E
Sbjct: 199 RSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSE 258

Query: 191 K------TLKVEHRMSANFYTKSDSKQAKGGSQSVQAPQENYIHVQARRGRATNNHSLAE 250
           +        K     S N   K  +   + G QS   P++ YIHV+ARRG+ATN+HSLAE
Sbjct: 259 EEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAE 318

Query: 251 RTRSWQVRREKISERMKLLQDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANV 310
           R     VRREKISERMK LQDLVPGCN++TG+ V+LDEIINYVQSLQ+QVEFLSMKLA V
Sbjct: 319 R-----VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATV 378

Query: 311 GPESSLDTEQILLTNNSYISSSNILRTRGKGVDSVLAIDPRLTTSH-TIPHVMFQLHGTV 354
            P+   + E +L        + + L+ R  G  S     P ++ ++  +PH   Q   T+
Sbjct: 379 NPQMDFNLEGLL--------AKDALQLRA-GSSSTTPFPPNMSMAYPPLPHGFMQ--QTL 437

[Close]

BLAST of Clc08G17300 vs. TAIR 10
Match: AT1G68920.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-31
Identity = 93/216 (43.06%), Postives = 126/216 (58.33%), Query Frame = 0


Query: 139 GSNSSSPNKNAEDNLDVEATEILNKDEKTLKVEHRMSANFYTKSDSKQAKGGSQSVQAPQ 198
           G NS +   +     + E     N DEK        S N   K  +   + G QS   P+
Sbjct: 242 GQNSEAAQSHRSQQSEEEPDN--NGDEKR---NDEQSPNSPGKKSNSGKQQGKQSSDPPK 301

Query: 199 ENYIHVQARRGRATNNHSLAERTRSWQVRREKISERMKLLQDLVPGCNQITGRTVVLDEI 258
           + YIHV+ARRG+ATN+HSLAER     VRREKISERMK LQDLVPGCN++TG+ V+LDEI
Sbjct: 302 DGYIHVRARRGQATNSHSLAER-----VRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 361

Query: 259 INYVQSLQQQVEFLSMKLANVGPESSLDTEQILLTNNSYISSSNILRTRGKGVDSVLAID 318
           INYVQSLQ+QVEFLSMKLA V P+   + E +L        + + L+ R  G  S     
Sbjct: 362 INYVQSLQRQVEFLSMKLATVNPQMDFNLEGLL--------AKDALQLRA-GSSSTTPFP 421

Query: 319 PRLTTSH-TIPHVMFQLHGTVPTMPKTTSQQLSSLS 354
           P ++ ++  +PH   Q   T+ ++ +T +  LS ++
Sbjct: 422 PNMSMAYPPLPHGFMQ--QTLSSIGRTITSPLSPMN 436

[Close]

BLAST of Clc08G17300 vs. TAIR 10
Match: AT3G23690.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-28
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 175 SANFYTKSDSK-QAKGGSQSVQAPQENYIHVQARRGRATNNHSLAERTRSWQVRREKISE 234
           S N   K DSK   K  ++  +AP++ YIHV+ARRG+AT++HSLAER      RREKISE
Sbjct: 162 SKNGVEKCDSKGDNKDDAKPPEAPKD-YIHVRARRGQATDSHSLAER-----ARREKISE 221

Query: 235 RMKLLQDLVPGCNQITGRTVVLDEIINYVQSLQQQVEFLSMKLANVGP------ESSLDT 291
           RM LLQDLVPGCN+ITG+ V+LDEIINYVQSLQ+QVEFLSMKLA V P       +SL T
Sbjct: 222 RMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLST 278

The following BLAST results are available for this feature:

BLAST of Clc08G17300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885625.1	7.7e-152	81.97	transcription factor bHLH74-like isoform X1 [Benincasa hispida]	[more]
XP_008444519.1	1.3e-138	79.54	PREDICTED: transcription factor bHLH49 isoform X1 [Cucumis melo]	[more]
KAA0060972.1	1.7e-138	79.54	transcription factor bHLH49 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004143033.1	3.1e-137	77.81	transcription factor bHLH49 [Cucumis sativus] >KGN62422.1 hypothetical protein C...	[more]
XP_038885626.1	3.3e-118	68.35	uncharacterized protein LOC120075945 isoform X2 [Benincasa hispida]	[more]

BLAST of Clc08G17300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NKN9	5.7e-33	43.16	Transcription factor bHLH74 OS=Arabidopsis thaliana OX=3702 GN=BHLH74 PE=1 SV=1	[more]
Q9CAA9	9.2e-31	34.92	Transcription factor bHLH49 OS=Arabidopsis thaliana OX=3702 GN=BHLH49 PE=1 SV=1	[more]
Q9LK48	2.1e-27	62.60	Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1	[more]
Q9SRT2	1.4e-26	49.07	Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1	[more]
Q8GY61	1.4e-26	46.34	Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1	[more]

BLAST of Clc08G17300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BA09	6.2e-139	79.54	transcription factor bHLH49 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487812 P...	[more]
A0A5A7UYJ9	8.1e-139	79.54	Transcription factor bHLH49 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LNP9	1.5e-137	77.81	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G353500 PE=4 S...	[more]
A0A1S4DVD5	2.4e-106	78.83	transcription factor bHLH74 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487812 P...	[more]
A0A6P6GAR5	5.7e-52	45.43	transcription factor bHLH74 isoform X3 OS=Ziziphus jujuba OX=326968 GN=LOC107420...	[more]

BLAST of Clc08G17300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10120.1	4.1e-34	43.16	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.1	6.5e-32	34.92	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.2	6.5e-32	34.92	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G68920.3	5.5e-31	43.06	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G23690.1	1.5e-28	62.60	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 216..271 e-value: 4.5E-4 score: 29.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 215..265 score: 10.76597
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 207..284 e-value: 1.2E-10 score: 43.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 208..278
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 46..353
None	No IPR available	PANTHER	PTHR12565:SF312	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 46..353
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 200..290 e-value: 1.88128E-50 score: 162.226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G17300.2	Clc08G17300.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity