Clc08G16830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G16830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	MFP1 attachment factor 1
Location	ClcChr08: 27247515 .. 27247958 (-)
RNA-Seq Expression	Clc08G16830
Synteny	Clc08G16830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGATCAAGACAACTCCCCTCAGACCCATCTACAATTCCCAGACCCCATCAAACCGCCAAAGCCATTCGTTGCCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGCGACGCCGTTATAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTTCGGCACCATTCCGCCGGATGAAGCCGACGCCGTCGCCCGTGCCATCGAGGACGAAGCGTATGCCACCGCCAATGGCTCTCCACCCACCGTGGACGACGGCATTGAGATTCTGCAGGTCTACTCCAAGGAGATTAGTAAGCGGATGCTCGAGGCGGTCAAGGGTAGAGCGAATCCGGCGGCTCCGGCGGAAAATGGTGAGAGGGAGGGAGTAAGATCACCTGTTGTTGAACCTAATGACGAAACCCCAACTCTGGAAACTGAATCTTGA

mRNA sequence

ATGTCCGATCAAGACAACTCCCCTCAGACCCATCTACAATTCCCAGACCCCATCAAACCGCCAAAGCCATTCGTTGCCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGCGACGCCGTTATAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTTCGGCACCATTCCGCCGGATGAAGCCGACGCCGTCGCCCGTGCCATCGAGGACGAAGCGTATGCCACCGCCAATGGCTCTCCACCCACCGTGGACGACGGCATTGAGATTCTGCAGGTCTACTCCAAGGAGATTAGTAAGCGGATGCTCGAGGCGGTCAAGGGTAGAGCGAATCCGGCGGCTCCGGCGGAAAATGGTGAGAGGGAGGGAGTAAGATCACCTGTTGTTGAACCTAATGACGAAACCCCAACTCTGGAAACTGAATCTTGA

Coding sequence (CDS)

ATGTCCGATCAAGACAACTCCCCTCAGACCCATCTACAATTCCCAGACCCCATCAAACCGCCAAAGCCATTCGTTGCCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGCGACGCCGTTATAAGCCGTCTGATCGAAACCCTCTCCACCCCTTCCATTCTCTCTAAGCGTTTCGGCACCATTCCGCCGGATGAAGCCGACGCCGTCGCCCGTGCCATCGAGGACGAAGCGTATGCCACCGCCAATGGCTCTCCACCCACCGTGGACGACGGCATTGAGATTCTGCAGGTCTACTCCAAGGAGATTAGTAAGCGGATGCTCGAGGCGGTCAAGGGTAGAGCGAATCCGGCGGCTCCGGCGGAAAATGGTGAGAGGGAGGGAGTAAGATCACCTGTTGTTGAACCTAATGACGAAACCCCAACTCTGGAAACTGAATCTTGA

Protein sequence

MSDQDNSPQTHLQFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGEREGVRSPVVEPNDETPTLETES

Homology

[Close]

BLAST of Clc08G16830 vs. NCBI nr
Match: XP_038885619.1 (MFP1 attachment factor 1-like [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 6.1e-65
Identity = 134/152 (88.16%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFP-----DPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSIL 60
           MSDQDNSPQTHLQFP     DP KPPKPF  KFSIWPPTQRTRDAVISRLIETLSTPSIL
Sbjct: 1   MSDQDNSPQTHLQFPDTEIKDPTKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSIL 60

Query: 61  SKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120
           SKRFGT+PP+EA AVAR IEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA
Sbjct: 61  SKRFGTVPPEEAAAVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120

Query: 121 NPAAPAENGEREGVRSPVVEPNDETPTLETES 148
            PAAPAENGE EGVRSPV+EP DET TLE+ES
Sbjct: 121 IPAAPAENGEIEGVRSPVIEPKDETSTLESES 152

[Close]

BLAST of Clc08G16830 vs. NCBI nr
Match: XP_008444590.1 (PREDICTED: MFP1 attachment factor 1 [Cucumis melo] >KAA0060931.1 MFP1 attachment factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 129/154 (83.77%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFP-------DPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPS 60
           MSDQ+NSPQ+HLQFP       DPIKPP PF  KFSIWPPTQRTRDAVISRLIETLSTPS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKDKDPIKPPMPFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKG 120
           ILSKRFG IPPDEA  VAR IE+EAYA+ANGSPP+VDDG+EILQVYSKEISKRMLEAVKG
Sbjct: 61  ILSKRFGIIPPDEAANVARIIEEEAYASANGSPPSVDDGVEILQVYSKEISKRMLEAVKG 120

Query: 121 RANPAAPAENGEREGVRSPVVEPNDETPTLETES 148
           R  PAAPAENGE E VRSPVVEPN ETPTLETES
Sbjct: 121 RPIPAAPAENGETEEVRSPVVEPNHETPTLETES 154

[Close]

BLAST of Clc08G16830 vs. NCBI nr
Match: XP_031736767.1 (MFP1 attachment factor 1 [Cucumis sativus] >KGN62474.1 hypothetical protein Csa_018723 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 3.0e-59
Identity = 126/152 (82.89%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFP-------DPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPS 60
           MSDQ+NSPQ+HLQFP       DPIKPP  F  KFSIWPPTQRTRDAVISRLIETLSTPS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKHKDPIKPPMQFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKG 120
           ILSKRFGTIPPDEA  VA+ IE+EAYA ANGSPP+VDDGIEILQVYSKEISKRMLEAVKG
Sbjct: 61  ILSKRFGTIPPDEAATVAQLIEEEAYAYANGSPPSVDDGIEILQVYSKEISKRMLEAVKG 120

Query: 121 RANPAAPAENGEREGVRSPVVEPNDETPTLET 146
           R +PAAPAENGE E VRSPVVE N ETPTLET
Sbjct: 121 RPSPAAPAENGETEEVRSPVVETNHETPTLET 152

[Close]

BLAST of Clc08G16830 vs. NCBI nr
Match: XP_023545637.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54
Identity = 116/152 (76.32%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MSDQDNSPQTHL-----QFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSIL 60
           MSDQD+SP   L     +  DPIKP  PF  KFSIWPPTQRTRDAV SRLIETLSTPSIL
Sbjct: 1   MSDQDSSPPVQLESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120
           SKR+GTIPP+ A  +AR IEDEAYATA+GSP TVDDGIEILQVYSKEISKRMLEAVKGRA
Sbjct: 61  SKRYGTIPPEAATTIARVIEDEAYATADGSPTTVDDGIEILQVYSKEISKRMLEAVKGRA 120

Query: 121 NPAAPAENGEREGVRSPVVEPNDETPTLETES 148
            PAAP ENGE+EG  SPVV+P+DE PT E ES
Sbjct: 121 IPAAPTENGEKEGSSSPVVDPHDENPTSEIES 152

[Close]

BLAST of Clc08G16830 vs. NCBI nr
Match: XP_022961994.1 (MFP1 attachment factor 1-like [Cucurbita moschata])

HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53
Identity = 115/152 (75.66%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MSDQDNSPQTHL-----QFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSIL 60
           MSDQD+SP   +     +  DPIKP  PF  KFSIWPPTQRTRDAV SRLIETLSTPSIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120
           SKR+GTIPP+ A  +AR IEDEAYATA+GSP TVDDGIEILQ+YSKEISKRMLEAVKGRA
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQLYSKEISKRMLEAVKGRA 120

Query: 121 NPAAPAENGEREGVRSPVVEPNDETPTLETES 148
            PAAP ENGE+EG  SPVV+PNDE PT E ES
Sbjct: 121 IPAAPTENGEKEGSSSPVVDPNDENPTSEIES 152

[Close]

BLAST of Clc08G16830 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.1e-32
Identity = 79/133 (59.40%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 22  KPFVAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYAT 81
           KP    FSIWPPTQRTRDAVI+RLIE+LSTPSILSKR+GT+P DEA   AR IE+EA+A 
Sbjct: 20  KPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAA 79

Query: 82  ANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGEREGVRSP--VVEPND- 141
           A  +    DDGIEILQVYSKEISKRM++ VK R+ PAA +E GE +    P    EP+  
Sbjct: 80  AGSTASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAASE-GESKPSELPADASEPSSA 139

Query: 142 -----ETPTLETE 147
                E  ++ETE
Sbjct: 140 SGLTGEVSSVETE 151

[Close]

BLAST of Clc08G16830 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFG 60
           +S+ +NS  T L   +  K P P      IWPPTQ+TRDAVI+RLIETLST SILSKRFG
Sbjct: 17  ISETENS--TTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFG 76

Query: 61  TIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAP 120
           ++  +EA +VA++IEDEAYA A+ +    DDGIEIL+ YSKEISKRMLE+VK ++N A+P
Sbjct: 77  SLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKAKSNVASP 136

Query: 121 AENGEREGVRSPV 134
               + +G+ S V
Sbjct: 137 PPK-DGDGIESAV 146

[Close]

BLAST of Clc08G16830 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 22  KPFVAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYAT 81
           KP      IWPPTQ+TRDAV++RLIETLST SILSKR+GT+  D+A  VA+ IE+EAY  
Sbjct: 52  KPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGV 111

Query: 82  ANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGEREGVRSPVVEPNDETP 141
           A+ +  + DDGI+IL++YSKEISKRMLE+VK R+N +    + E     +  V  +D  P
Sbjct: 112 ASNAVSSDDDGIKILELYSKEISKRMLESVKARSNASVGNGSVEDANTDASEVSKDDAGP 171

Query: 142 TLETE 147
             E E
Sbjct: 172 ASEEE 176

[Close]

BLAST of Clc08G16830 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.5e-16
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 28  FSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYATANGSPP 87
           FS+WPP Q++RD V++ +I+TLST SILS ++GTI P+EA AVA++IE++AY  A  S  
Sbjct: 51  FSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIA--SRF 110

Query: 88  TVDDGIEILQVYSKEISKRMLEAVKGR 115
              DGI+ L+VY  E S+RM+E+ + R
Sbjct: 111 VSSDGIKNLEVYGIETSERMIESAEVR 135

[Close]

BLAST of Clc08G16830 vs. ExPASy Swiss-Prot
Match: Q9LE82 (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 25  VAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYATANG 84
           V    +WPP++ TR  ++ R+ + ++TPSI S+++G +  +EA+  A+ IED A+ATAN 
Sbjct: 12  VLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANK 71

Query: 85  --SPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGERE 128
                   DG   + VY+KE SK ML+ +K       P E  E E
Sbjct: 72  HFQNEPDGDGTSAVHVYAKESSKLMLDVIK-----RGPQEESEVE 111

[Close]

BLAST of Clc08G16830 vs. ExPASy TrEMBL
Match: A0A5A7V571 (MFP1 attachment factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00640 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 129/154 (83.77%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFP-------DPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPS 60
           MSDQ+NSPQ+HLQFP       DPIKPP PF  KFSIWPPTQRTRDAVISRLIETLSTPS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKDKDPIKPPMPFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKG 120
           ILSKRFG IPPDEA  VAR IE+EAYA+ANGSPP+VDDG+EILQVYSKEISKRMLEAVKG
Sbjct: 61  ILSKRFGIIPPDEAANVARIIEEEAYASANGSPPSVDDGVEILQVYSKEISKRMLEAVKG 120

Query: 121 RANPAAPAENGEREGVRSPVVEPNDETPTLETES 148
           R  PAAPAENGE E VRSPVVEPN ETPTLETES
Sbjct: 121 RPIPAAPAENGETEEVRSPVVEPNHETPTLETES 154

[Close]

BLAST of Clc08G16830 vs. ExPASy TrEMBL
Match: A0A1S3BBH7 (MFP1 attachment factor 1 OS=Cucumis melo OX=3656 GN=LOC103487862 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 129/154 (83.77%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFP-------DPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPS 60
           MSDQ+NSPQ+HLQFP       DPIKPP PF  KFSIWPPTQRTRDAVISRLIETLSTPS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKDKDPIKPPMPFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKG 120
           ILSKRFG IPPDEA  VAR IE+EAYA+ANGSPP+VDDG+EILQVYSKEISKRMLEAVKG
Sbjct: 61  ILSKRFGIIPPDEAANVARIIEEEAYASANGSPPSVDDGVEILQVYSKEISKRMLEAVKG 120

Query: 121 RANPAAPAENGEREGVRSPVVEPNDETPTLETES 148
           R  PAAPAENGE E VRSPVVEPN ETPTLETES
Sbjct: 121 RPIPAAPAENGETEEVRSPVVEPNHETPTLETES 154

[Close]

BLAST of Clc08G16830 vs. ExPASy TrEMBL
Match: A0A0A0LNB9 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_2G355000 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 126/152 (82.89%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFP-------DPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPS 60
           MSDQ+NSPQ+HLQFP       DPIKPP  F  KFSIWPPTQRTRDAVISRLIETLSTPS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKHKDPIKPPMQFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKG 120
           ILSKRFGTIPPDEA  VA+ IE+EAYA ANGSPP+VDDGIEILQVYSKEISKRMLEAVKG
Sbjct: 61  ILSKRFGTIPPDEAATVAQLIEEEAYAYANGSPPSVDDGIEILQVYSKEISKRMLEAVKG 120

Query: 121 RANPAAPAENGEREGVRSPVVEPNDETPTLET 146
           R +PAAPAENGE E VRSPVVE N ETPTLET
Sbjct: 121 RPSPAAPAENGETEEVRSPVVETNHETPTLET 152

[Close]

BLAST of Clc08G16830 vs. ExPASy TrEMBL
Match: A0A6J1HFL2 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462597 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.9e-54
Identity = 115/152 (75.66%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MSDQDNSPQTHL-----QFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSIL 60
           MSDQD+SP   +     +  DPIKP  PF  KFSIWPPTQRTRDAV SRLIETLSTPSIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120
           SKR+GTIPP+ A  +AR IEDEAYATA+GSP TVDDGIEILQ+YSKEISKRMLEAVKGRA
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQLYSKEISKRMLEAVKGRA 120

Query: 121 NPAAPAENGEREGVRSPVVEPNDETPTLETES 148
            PAAP ENGE+EG  SPVV+PNDE PT E ES
Sbjct: 121 IPAAPTENGEKEGSSSPVVDPNDENPTSEIES 152

[Close]

BLAST of Clc08G16830 vs. ExPASy TrEMBL
Match: A0A6J1KE17 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492391 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.4e-51
Identity = 112/152 (73.68%), Postives = 122/152 (80.26%), Query Frame = 0


Query: 1   MSDQDNSPQTHL-----QFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSIL 60
           MSDQD+SP   +     +  DPIK   PF  KFSIWPPTQRTRDAV SRLIETLST SIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKSANPFATKFSIWPPTQRTRDAVTSRLIETLSTTSIL 60

Query: 61  SKRFGTIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120
           SKR+GTIPP+ A  +AR IEDEAYATA+GSP TVDDGIEILQVYSK+ISKRMLEAVKGRA
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQVYSKQISKRMLEAVKGRA 120

Query: 121 NPAAPAENGEREGVRSPVVEPNDETPTLETES 148
            PAAP ENGE+EG  SPVV+PNDE P  E ES
Sbjct: 121 IPAAPTENGEKEGSSSPVVDPNDENPISEIES 152

[Close]

BLAST of Clc08G16830 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 )

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 1   MSDQDNSPQTHLQFPDPIKPPKPFVAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFG 60
           +S+ +NS  T L   +  K P P      IWPPTQ+TRDAVI+RLIETLST SILSKRFG
Sbjct: 17  ISETENS--TTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFG 76

Query: 61  TIPPDEADAVARAIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAP 120
           ++  +EA +VA++IEDEAYA A+ +    DDGIEIL+ YSKEISKRMLE+VK ++N A+P
Sbjct: 77  SLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKAKSNVASP 136

Query: 121 AENGEREGVRSPV 134
               + +G+ S V
Sbjct: 137 PPK-DGDGIESAV 146

[Close]

BLAST of Clc08G16830 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 )

HSP 1 Score: 120.9 bits (302), Expect = 8.4e-28
Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 22  KPFVAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYAT 81
           KP      IWPPTQ+TRDAV++RLIETLST SILSKR+GT+  D+A  VA+ IE+EAY  
Sbjct: 52  KPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGV 111

Query: 82  ANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGEREGVRSPVVEPNDETP 141
           A+ +  + DDGI+IL++YSKEISKRMLE+VK R+N +    + E     +  V  +D  P
Sbjct: 112 ASNAVSSDDDGIKILELYSKEISKRMLESVKARSNASVGNGSVEDANTDASEVSKDDAGP 171

Query: 142 TLETE 147
             E E
Sbjct: 172 ASEEE 176

[Close]

BLAST of Clc08G16830 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 )

HSP 1 Score: 86.7 bits (213), Expect = 1.7e-17
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 28  FSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYATANGSPP 87
           FS+WPP Q++RD V++ +I+TLST SILS ++GTI P+EA AVA++IE++AY  A  S  
Sbjct: 51  FSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIA--SRF 110

Query: 88  TVDDGIEILQVYSKEISKRMLEAVKGR 115
              DGI+ L+VY  E S+RM+E+ + R
Sbjct: 111 VSSDGIKNLEVYGIETSERMIESAEVR 135

[Close]

BLAST of Clc08G16830 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 67.8 bits (164), Expect = 8.4e-12
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 25  VAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYATANG 84
           V    +WPP++ TR  ++ R+ + ++TPSI S+++G +  +EA+  A+ IED A+ATAN 
Sbjct: 12  VLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANK 71

Query: 85  --SPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGERE 128
                   DG   + VY+KE SK ML+ +K       P E  E E
Sbjct: 72  HFQNEPDGDGTSAVHVYAKESSKLMLDVIK-----RGPQEESEVE 111

[Close]

BLAST of Clc08G16830 vs. TAIR 10
Match: AT3G63130.2 (RAN GTPase activating protein 1 )

HSP 1 Score: 67.8 bits (164), Expect = 8.4e-12
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 25  VAKFSIWPPTQRTRDAVISRLIETLSTPSILSKRFGTIPPDEADAVARAIEDEAYATANG 84
           V    +WPP++ TR  ++ R+ + ++TPSI S+++G +  +EA+  A+ IED A+ATAN 
Sbjct: 12  VLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANK 71

Query: 85  --SPPTVDDGIEILQVYSKEISKRMLEAVKGRANPAAPAENGERE 128
                   DG   + VY+KE SK ML+ +K       P E  E E
Sbjct: 72  HFQNEPDGDGTSAVHVYAKESSKLMLDVIK-----RGPQEESEVE 111

The following BLAST results are available for this feature:

BLAST of Clc08G16830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885619.1	6.1e-65	88.16	MFP1 attachment factor 1-like [Benincasa hispida]	[more]
XP_008444590.1	2.4e-61	83.77	PREDICTED: MFP1 attachment factor 1 [Cucumis melo] >KAA0060931.1 MFP1 attachment...	[more]
XP_031736767.1	3.0e-59	82.89	MFP1 attachment factor 1 [Cucumis sativus] >KGN62474.1 hypothetical protein Csa_...	[more]
XP_023545637.1	8.3e-54	76.32	MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961994.1	1.4e-53	75.66	MFP1 attachment factor 1-like [Cucurbita moschata]	[more]

BLAST of Clc08G16830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N6	7.1e-32	59.40	MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1	[more]
Q9FMH6	1.5e-29	55.64	WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=...	[more]
Q9C500	1.2e-26	52.80	WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=...	[more]
Q0WQ91	2.5e-16	51.72	WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=...	[more]
Q9LE82	1.2e-10	37.14	RAN GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=RANGAP1 PE=1 ...	[more]

BLAST of Clc08G16830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V571	1.2e-61	83.77	MFP1 attachment factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BBH7	1.2e-61	83.77	MFP1 attachment factor 1 OS=Cucumis melo OX=3656 GN=LOC103487862 PE=4 SV=1	[more]
A0A0A0LNB9	1.4e-59	82.89	MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_2G355000 PE=4 SV=1	[more]
A0A6J1HFL2	6.9e-54	75.66	MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462597 PE=4...	[more]
A0A6J1KE17	2.4e-51	73.68	MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492391 PE=4 S...	[more]

BLAST of Clc08G16830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43070.1	1.1e-30	55.64	WPP domain protein 1	[more]
AT1G47200.1	8.4e-28	52.80	WPP domain protein 2	[more]
AT5G27940.1	1.7e-17	51.72	WPP domain protein 3	[more]
AT3G63130.1	8.4e-12	37.14	RAN GTPase activating protein 1	[more]
AT3G63130.2	8.4e-12	37.14	RAN GTPase activating protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 27..121 e-value: 3.5E-38 score: 131.9
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 28..118 e-value: 1.5E-37 score: 128.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..147
None	No IPR available	PANTHER	PTHR34362:SF1	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 6..134
IPR044692	WPP domain-containing protein 1/2/3	PANTHER	PTHR34362	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 6..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G16830.1	Clc08G16830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048527	lateral root development
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005634	nucleus