Clc08G16400 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G16400
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Calcium-binding EF hand family protein
Location	ClcChr08: 26902900 .. 26913109 (-)
RNA-Seq Expression	Clc08G16400
Synteny	Clc08G16400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGTCCAGATCTCAATTGAAGTTGACGAGGGATGAAGTTAGGGAGATCTTACAAGAGCATGACGTTGATGGAGATGGCTCCCTCACCAAGCATGAAGTGATGCAAGCCTTGAACACTATGGGCGCTATGATGTCGTTCCAGAAAGCTCACTATGGTGTTGGTTATGCTGACAAAGATGGCGATGGCTTCGTCAAAGGTGAGGAAGAGATGGAGAAACTCGTCGACTATGTCATGAGGTTTCAGACCCCAAGGACCCCGAAGGTCGTCCCAAAGCCCGCAAATCATTGTAACGAGGGTAAATCCATTGTGTAATCTTTTTTCTTTCGATGTATCCGTCTGTATTTCAGTTAATATAGTTTATGCTCCAATTGAGTTGTGGTCGAATAATTACGTACGTATGTCTATTGTCGTATGTTTGTCGTTGTTGTACTTTCATGTTGTCACCAATACCATTGGGTCTGGTAATAAAGTGTCTTCTTGTGTTGTACCCATGGATTATTAAGTAAAAATGTCAGTTTCAGTTTCATGAAAATATATCAGTAGAATATTTGTGTCTCCTTTCTTCTCTATACATGTTTACATTTTACAGAAAATTATTAAGAAAGAAAGCTTATAAAAAGAAAAAAAAAAAATCAGTGTAATATATATAGAAACTATTAAATAACATCCTAATAAAAAGTTTACATATACAAAAATTTGAAAGTCCACTATACATCGCTACAATGTAGTTATTACGACGCTCTTCACAGTATCTATTGAGAATAGATTAAAAAATCTTGCTTAATTTTAACCGAATCTTCAACAACAAGAAGATCCCTATATAAATGATGTGTGTGGGAGACTATAGTTAAAAAATCTTGCTTACTTTTCATTGCAAGTTAAGATTCTCATCTAAAGAATACAAATGCCCGAATTGGTGCATTCTATGTAAAAATGATGGTGAAACTGCAGAGCATATCTTCATACACTTCCCTTACGCCAAACATGTTTGAGCCAATCTCAATTCTGCCATCTCTTTGGATGATATACTATATGTTTTAACACACATAAAACAAAATAGTAAGAAGAAAGTCTTGCGGAGTAATCTTATTGGCGCTTGGTCTCTCTAGTTGGAAGCGAAATAGGAGAACATTCAATGAGGAAGCTAACCCCCGGGACATTTATGAGAAGATCTTATAAAAATGTTGTTGCTCTATGGACTACTACATTTAATTTATTTTGTAACTACGATGGTGCTTGTATAGCTCTCACTTACAAAGTTTTCCTCTGGCCTATCATCATTTTGTATTTGCACTTTGAGCTTCCATGTCTTTGTATACTTATAAGAGCACTAAGGATGTATTAATTTAGTTGACATAATATACGAGTGTATCTATTGATCCCTCAACCCTAGTACTCTTTTTTTAAAAAAAAAATTAAATTAAACCTATGCACAACTATGTCATGTTTACATACATGCAATGAAATTTTGGTCCAATCATAATGAAATCAATTGTTAATGAAATAAGATTACTTGGAGGCCATTTACGACAAACTACAAGCTAATCTTAATAAAAAATCTATTGGTATTGTTTACTTTCATATGGAATAGTAACAAAGTGTAGATGATAATTGAAATGTACTTTTTATATTTTTAATTATTTACATTTTCTATTTTAACCTAATTGTTAATTTTTTTTTATTTACTAGTACAAATTTTTATGCTTAATTTAAATTTTAAAAAATAAAATAGTAATTATCTCCAAATCTCACCTGTAGCCACCTAATTTTATCTGACCTCTTTTAATTAATTTGAATTAACATGTAAATTTGCTTATTTTTGCATGTCTATTTGCTAATTAAATCTCATTTTTATCATACTTTCATTTGTGAACATTCGGTGATTTTGTGTAGTTTAATCAAATTAACTACATTGGTTGAAAGAAAAAAAAAGAACAAAAAGAGCAAAATATTGAATTCGGATTTGGTTGACAAAAAGCTCCAATCTATTTTGAGCTTAATCCAAGTTTGGCAAATTTTCAATTAAAATAAAATTTATTAAAAAGAAATTTGCAAAATGGAGTAAGGTTTTTGGGTTTTTGGGTTTTAAATAGACAATTTTTCTTTCTCTTCGACAAAAACCCTAGCCACCATTTTCAATAACCCTCATTTTTTCTTAAAAAAACCTCTAGCCTCTACAATGTCAAGAATCCAACACACAAGAAAACCTCTAACTCAGTTTGGGGTGCATTGGTAGGGCTTTGGTCCCAAGGATCCATACTTCAAACAACAAGAGAGTTTAGAGTTTTGGATTTCAACCTTTTTTTTTTCTTCTTTTTTAAGGTCCCCTAAAAGGAAAAAAAAAATAATAAAGCGTTAGATATTTTATTATTGTTCTTGTTCTTATTTCTCTATTTTTCTTCCTCTTACAATTATTTCTTTATTGTCCTATGAGCTTCTCTTTTATTTACTTATTTATATTGCTTTACATCTTCTGGTTTATTTATTTATTTACTTATTTTTTATTAATTATTTGGTTTTACATCTCTTTTCTTTTTCTTGCAAGCTTCTTTTTCAGTATCTATATAAGTGACAGATAAAAAAATTAGAGTGTTTAGAGTGGAAGAGAAGAAAGAAGTAAAATAGATGAAAAAAAATAACTTAGTTAAAAAAATTCAATTTGATTAATAATAATATTTTTGTTGCTTTATTATTTCTTTATTTTGTTAGTTTATTCTTAAACTTTATTCTCTATATATTTATCTTTATTTTTTTTGTTTATAATTAGAATTTTGATTTATTATAGTCTTGATTGTTGTTTCTTTAGCATTTTCTTATTTTTTATATGTATATTTAAATATTATATTTTTTCTTCCTTTTTTTTGGTCAATTTAATATATTATTGCTAATAGTGGTTAAAATTTGTTAATATTTTTAATTAATTTTTCTTTTTTTAAAAAAATCATCCAATGGATTATAGAAATATTTGGGAGTCTGATTTTCTAGAATCTTGAAGTGAGGAAGTCGATTCTTTGGGAGTCCGAGATCGATTTTTAATATGTTTTATTAAACATTTAAATGTTTGTAAATATCATTGCTTATTTATTTATTGATTTAAATGTATTATTAAATTATATATTTTACCAATGTAACTGTACAATATTTGAATTAATGTCATTTTTAGTAAAATTTCTCTAGCATTTTAAATACTTTTAAGTTTATTTTCAAATTGTTAATATTTAATCTCTTTGAGTTTTATTAAAGAAAATATTTTAATCTCTTTTTTAAAAAAATTTGTTTTCAAGAGTGTTTTCCTTCAAATTTCCGACGACGGAATTTAAAAAATTTAGGATTCTGATTATCTAAAATTATTAAAAGATTCTTCGGGAGTCCAAGATAACGTATAAAAAGGAATTATTTGGTGTGCAATACTTATTTTGGTCCATGACACAAGCCACTTAAATTGCTAAATTTTTTTACACCGATCAGAACAAGCACGATTATTCGTGTACTTATCTTGTTCTTTTTTTCTTTCATTTTTTTTTCTTAACATAAAATTAGTCGCATCAGACAAAGTTACAAAGTTCAAAACGTTCAAAACGTTCTATATTCGCCAAAGGCTTCCTAATCAAGATAAGCATACACCAACAACAAGATGGAACCACAAAGCTATGCTTTTTAAGAACCCCTTTCAAGCCTCACATTTTCTTCTCAACAGTTCTTGGACTTGACACTACAGTGAAGGCTGCAAAATCGTGTCGATTTCGTCTGTGTTCAGGGCGATAAAATGACTCATAAACATGACAAGAAGAAATCAGGGTACAAGTTGCAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTTAATGGTGACGGTCGCTTGAGCATCAAAGAATTATCGAGAGTTTTCGGGTCGCTCGGAGCATTCCTCCCTCTCTACCGTGCAGCTTGTGGCTTGTTCATTGCGGATGACGATGGCGATGGATTTATCACTGAGAAAGAACTAGAGAAAGTGGTAGATTATGCTATTAAATGTAAGTATAACATAATCTAGTTATGTTTTCCATCATGCTGTGGGAGGTTCCTTGTGAGATAATGTAAGAAAAATAATATACAAGGTAATGTCTGTTTAAGATACCTTCCTTATTGTAATTGTCTATGCTGTTGCAAAGATGATAGAATTTCCAATAAACATCTATTATGTGGTGCATAATATCCATGCATGATAGCAATTTTCGTTACAAAAATAATATAAATAATGGTTAAGAAGAAATGAAAATGCCAAAGTGTTGAAAGTTGGTAATTTAATTAAAATTTTACCAATATATTGATGGATATACTTCTAGAAGGAATATGCATCACTATCAAAACAAATCGAACCAAATCGATCAATGTCCAATTATGCTCAAAACGAATTGAAACAAATATATACGTGGTTGGTTAATTTGATTCTATTTGATTTTTTGTTTTCTAAAGAAAAAATTTGATGGAATTATTGTTAGGATGATTTTGGTTCTTCTAAATCTCAATAGTCCAATTATTCTAAAATAATTAAATTAAATAGTCGATTCTATTGTTTTGCGGATCTTTTACTTTTAGGATGTGCTAATTCAACATTTAATAAAATTATAATTTTTAGTATTTCAAACAAATATTAACATGATCAAATTATAAATTTTAGCTTTTAAATTTAAGTGTTGTTGGGTTTATTAAGTTTATAAACTTTGAAAAAAAATCATTTACGTACATTCCTAAAATTATTTAGAATTATGGTAGTAAAGATTTGACTTTTTGATTAATAAAAAAAAGTTGAAAAATATTGTTCTCGGAAAGATATAACAACCATAATTTACCAAACAAATATGGAAAACTCACTTTCTATTATTGTTTTTGAAAAAAACACTCAAATTCTAAAGGAATCAGTAAAGAATAGACTAAAAAATAGAGAACTAAAAAATCTCTTAAAATTCCAATTTTGAAGCTTAAATTCAATGGTTCATGTCAGAACTTTATATATCACTATCTGATCTACTACTTGCGGAAAGAGTAAGCAATAAGCAAACTCACTTTACATTAAATTAATATTTATAAATGACGTAAAGAATTTAATATCAATCTTTAATTATATACTTTTTTAAACAAATATATGTTAATAGATAAGCTCAATAATTCATTGCTTGTTGGTAACTTTCAATATTAGGACCGAGTACTATTGCCCTATAAATAAGGAAAATTATACACAATAGTCAATTAAACTTTTTATTTGATTAATTCAAAAAAGAATTTTAATAGGTCAATATGGTTTGTATTTGCCACAATAAAACTAAATCATATTCTAATTTTTAACTTAGATATAATAATGATATTTAATCAAATTCATTAAACTTTTACTTGCAGAAATTTAATTAAGTGCCATTTCTTTAACATTATAAGAGAAGAGATAGGAGTCAATAAGTATACTCAGACATTTTAACTTAGATTGACACATTCTTAACATTCTTATCTTCACATAAATCCAAATGAGATACAAATATAAATATAATTACAGAGACAAAGGAAGGAGAGCTCAAAATCAGCCCAACCAACCACCAAAACTATTGAAGACCTCATTTATTAAATCTGAGTGTTATTTAAGGCTCAAATATACAAGTTTTGTTTAACCCAAAAGAAAATTAATTATTTTAGACCTTATTTGATTAAGCTTTATTTTTTACTTTTTTTTCTTTATGAAAATTGTGATTATTTTCTTATACTTTTTTTACTATGAATTTCACATTTTTTTCAAGAAAAAAATATATTTTAATTTTTAACTAAATTTTAAAAAATAAAAACTATTTTTTAGTATCTTCAAGAAAAATTCTATAGGTTAAAAACAAAAGAATCTGAAGAAAAAGAAAAGTTACAAAAGAATAGTATTTATAAACTTGTTCTAAAAAAACATAACATATATTTCTATTTCTTCAACTTTTGCCAATTAATCAAACTCCAATATTTGAAAAAGAAAAAAAAAAAAAAAGGAATCCACTGTTTCGAAAAAAAAAATGAAAAATCAAGGAATCCAATATAAATTGAAAATTAAAAAGTCAGGATTAAAATGGTCATATACCTATATGAAGACTTGTCTTTTCTGGGCTTCATTTATAATTAATTTTTGGTGGTCTTTTCTCCTTTTTGAATTTATTGATGAGAATAAGCATATTGTTTCTGTTCATAAATACATAAATTATTTTAGTTCTATCAGCTTTACAGCCGATTAGACTGTTCATTTTGATTAGTGAAGACAGTTGTGATGAAATATTGATAAAACTAAATGTCAAATTACGGACTTAACTTAAAAATTTAAACTAAATGTAAATTTAATATTATAGCATCTTACACTAAATTTCTATTTAGTGTAATATTTGAATTTATTAATGATTTAACATCAAATTAGAGTAAAAAAAAGACTCAACCTGCGAACTTAGGTGATTTAACTGAAGAAATTTTATTTTTATAATATAAATATTAAGAATATAAGAAAAACGAAGTTAATATTTTGTGTAAAATTGATTGTCATGGAAAAAGCGAGAAGAGAAGAATATGGAACAAATGAATGTGCCACCCACAATGAAATATGGGACGCAACTTGGAAATTTGAGCATCTGTCAAAAACAGTACTTTGGTATCAAGATAAGAAATGAATACTACGTCAGTGTCATTGTTAAATTATTTTTTAGCTTTTATCATATTCAAAAAAAAAAAAAATTATTTAATATGATTTAACACTTTAAAGCACGATTTTTGTACAATTAAAACTGATTTTAACGAAGGACTAAAAGTATATTTTAGAGTAAATTCAAATTAAAAAAAAAATTAATTTTAATAATTTCAAAATCATTTGAAAACATACCTAATTAAAATGATTGGGATAAATTGTATGTGATCTTTTTATATAGTGTTATATTGTTTCATGAATGAATGTTTTTTTTTGTAATTAACCAATTCGAAGAAAAAACATGACTATTCGAATGACCACAAATAGTCGTAAATATGTCTCTTCTTCAATTTAAAACATTTCTCAAATTTCTAGAATATGTTCAAGTTCGGTTTATTTCCACAAAGTATAGTTCATTGGATCTTGTGAATGAGGTGGTATTTCTGTAAGAAAGATAATATGTTCTATTCTACGAGACAATTGTTCATGAAATTCAGACACAAGAGAGAGTAAAATTATTTTAAGGAGATAACATGAAATTGTTGGACTCAGATTAATTCTGTTCGGTATACAAAGGCATGTATTTTCTAATTTTTTAGTGATATTATTCATATATAACGAAGATGTGATGTTATATGCCAATTTTTCATTCAGAAATAAAAAATGAAATCAACACTATTGATTTAAGCAAACCATATTAGAGTGAAGCATGAAAGATTAATTATATATAGAAACAATTAGAAGGCTAAAAAAAATTGTTTTCTGAAAAATATATTTCTTTTTCCTGTTTAAAATGAATGGATTTAAAATTTTATATCTTACTATAACTTGAATTTTTTTTTATTTTTAAAAGTTTATTAATATTGACTTTTATTATATTTTTTTAATTAAAATTTAAATATGACAAAAGTTAAATAAATAATTTAATTCTGTGAATCTGACCATTTTATTTTTTAAAAAAATTTACCAAAAAACAGGATTTGAAATCATTTTCTTTTCTAAGTACCAAATAACGAAATTATTTTGAAATCCTACCTTTTCTAGAGCGTAAAATAAAGAAACTCTTTTCACACTCATGGAAGGAAGAAGCAAGCTCTCCATTCTATTTATAGATTTCTTGACGTTGCGAAGGTTTTATTAGCATTGGTTATTCGTGGATGACAATTGTCTATTTTGGATTAAATTTTGAAAAAGAAAAAAACCCATTTGAATTCTATTTTTAAAAATTGTCATTCCAATAAAGATATTAACATTGTATATTGGGAATCTCGCAATAATGGGCAACTTAATTGGCCCAATACATTGTCCCAATATAAAATATTTTGTATTAGATATTTTAGTATTATATTCTAATTATTACATAAATAATATAACTCAGTTATATATTTATTTTACAAGGATTGTGAAGTCTCCTGTCTTTTTAATATAAGATTGTCAATAAGAATCTATAAAAGACTTCAATCATATCCATAACACGAATATAAGTTAACTTTGAAAATTTGGTAGAAAAAAGAAAAAGAAAGTGTTAAAAAGAAAGGTGCTTCTTTTGTGTAGCATGAGAAAATTGATGATGTACACGAAAATTATATCATATCTCAATTGCAATTCTCTAGAATTTATGATCAAGAACAAAATAACTAAAATCCTATTTGATAACCATTTAGTTTTTGGTTTTTAGATTTTGGTTTTTTCAAAATCTGTTTTTGCTTTTTAGTTTTTAAAAGACAATAATCATACATGTTTAGTTATTATTTTTGGTTTTCTATGTTTTTAAAAGAAAACAGAAATAAATGTTTGGTAATTGATTTTTGTTTTCTGTTTTTCAAAAATAAAAACAAAAAATATGTTTGATAATAATGTTTTAAAAAATAATAATAAGTTTTGGTGATTTTTTTTAGTTTTATATAAAAATGAAATTAAACAATTTTTACCAATAATTTTCCATCCAATGTACATAGTTATAAAATTATATCTTTATTTTTAATTTTTTAAAATATATACCGATAAAATCATTATCAATATTTTATATGTACGGAATAATCACAAATGAAATGAAAAAATATATATATAACTTTGGACTTTTAATTTAATCCAATCAAATTTGGATTTACGAATTGGACTCTGCACTAAGTAGTGAAACTAATACATGTTTAAATTTGTATAAAACAAAATTTTCCAGGAGCCAACCAATAAATCATACTTAAAAAAAAAAAAGAAAAAAAAGTTAAATGACATTTAGTACGTGATTTTGAAATGCTCAACTCCTATCAACCCATAAAAACTTAGCCACAAAAATAAGTTCAAGGTAAAAACTCATACAAATTAAACGACAAAGTTTTCCCAGTTCAACTAAAAAAGATGTAAAATAAATCAAAAGAAAAAAAAAATGTTAAAAATTACATTTGGGTCCTTGTACTTTTACTAAAGTAATGATTTGGTCCCGATACTTTTAAAATTAATGATTTAGTCCATGTATTTTAAAATTAGTTACGTTTTAACCTCTAAATATAACAGAAAGTTAAGGTGGCTGCCGTCTAGGAGATCCACTTGTACAAATTAATAGGCAATTTTGTGTAGGTCAAGCCGAGTCAGATTGGGGTTGTTCAAAATTGAACTGGTTTAAATCAAGGAGATAAAACACGACTTAAAAATCCTACGTCCTAAGGCTAGCTTATGATTAAATGAGGAATGATAGTTTTTAGATTTATCTCTCCTTTCATGCAATCTAATATTTTGTGTGGCTCTAACTCTTTATTTAAGTTATGTCCCTTGCTTACAATTAACCCATTCATAATGATTAATTGATTTGAAAAAGTCTAAAAGGTTATAATAATATTTAAGTAAGGATAATTATTATTTTCATTGATGCATAAAGTCTTTTTGAGTGAGTGAAATCAAAAATATATTGACTACTTAGAAAATGCGTGTTTGATTCTTCACGTGAGCTTAATAAAGTTGATGTTAGAGTTAAGGTCTTGACCGCATACCTTTTTTGGTTTTGTTTTGTTGTTGTTTTTTTTTTTTTCTTTATTTTTTTTTTAATAAAAAATGTTAAAATTCTCCCACCACTCAAAAGAAAAAGAAAATGTGATACCTTTATTTTTAAGAGAAGATTCTATATATGTACCAATATGATTATAAAGAAGTTGGAATTCTATTATAAATACCCTTATCGTCCATGCATCGATCACCAAGCAAAACATAAAAAAGAACACAATTCACGTTTAGCCCTAACATTAAACTTAGATAATTTCTAAGAAAATGTCTCGTGCATCAAGCAGGCTACAACTCTCCAGAGAGGATATAAAGGAGATTTTCAGAGAGCACGACATCGACGGAGATGGTCGATTGAGCATGAACGAGGTGATGAAGGCCTTCGGGTTCTTAGGTAGTATTCTTCCTTTCTACAAGGCTCACTATGGAATGGCTCATGCTGATGCTGATAACGATGGCTACATCGTCGAGGATGAGCTCGACAAGCTCGTTGACTATGCTGAGAAATTTCAACACAAAAGACAATGTTGA

mRNA sequence

ATGGCGTTGTCCAGATCTCAATTGAAGTTGACGAGGGATGAAGTTAGGGAGATCTTACAAGAGCATGACGTTGATGGAGATGGCTCCCTCACCAAGCATGAAGTGATGCAAGCCTTGAACACTATGGGCGCTATGATGTCGTTCCAGAAAGCTCACTATGGTGTTGGTTATGCTGACAAAGATGGCGATGGCTTCGTCAAAGGTGAGGAAGAGATGGAGAAACTCGTCGACTATGTCATGAGGTTTCAGACCCCAAGGACCCCGAAGGGCGATAAAATGACTCATAAACATGACAAGAAGAAATCAGGGTACAAGTTGCAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTTAATGGTGACGGTCGCTTGAGCATCAAAGAATTATCGAGAGTTTTCGGGTCGCTCGGAGCATTCCTCCCTCTCTACCGTGCAGCTTGTGGCTTGTTCATTGCGGATGACGATGGCGATGGATTTATCACTGAGAAAGAACTAGAGAAAGTGGTAGATTATGCTATTAAATGTAAGCTACAACTCTCCAGAGAGGATATAAAGGAGATTTTCAGAGAGCACGACATCGACGGAGATGGTCGATTGAGCATGAACGAGGTGATGAAGGCCTTCGGGTTCTTAGGTAGTATTCTTCCTTTCTACAAGGCTCACTATGGAATGGCTCATGCTGATGCTGATAACGATGGCTACATCGTCGAGGATGAGCTCGACAAGCTCGTTGACTATGCTGAGAAATTTCAACACAAAAGACAATGTTGA

Coding sequence (CDS)

ATGGCGTTGTCCAGATCTCAATTGAAGTTGACGAGGGATGAAGTTAGGGAGATCTTACAAGAGCATGACGTTGATGGAGATGGCTCCCTCACCAAGCATGAAGTGATGCAAGCCTTGAACACTATGGGCGCTATGATGTCGTTCCAGAAAGCTCACTATGGTGTTGGTTATGCTGACAAAGATGGCGATGGCTTCGTCAAAGGTGAGGAAGAGATGGAGAAACTCGTCGACTATGTCATGAGGTTTCAGACCCCAAGGACCCCGAAGGGCGATAAAATGACTCATAAACATGACAAGAAGAAATCAGGGTACAAGTTGCAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTTAATGGTGACGGTCGCTTGAGCATCAAAGAATTATCGAGAGTTTTCGGGTCGCTCGGAGCATTCCTCCCTCTCTACCGTGCAGCTTGTGGCTTGTTCATTGCGGATGACGATGGCGATGGATTTATCACTGAGAAAGAACTAGAGAAAGTGGTAGATTATGCTATTAAATGTAAGCTACAACTCTCCAGAGAGGATATAAAGGAGATTTTCAGAGAGCACGACATCGACGGAGATGGTCGATTGAGCATGAACGAGGTGATGAAGGCCTTCGGGTTCTTAGGTAGTATTCTTCCTTTCTACAAGGCTCACTATGGAATGGCTCATGCTGATGCTGATAACGATGGCTACATCGTCGAGGATGAGCTCGACAAGCTCGTTGACTATGCTGAGAAATTTCAACACAAAAGACAATGTTGA

Protein sequence

MALSRSQLKLTRDEVREILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADKDGDGFVKGEEEMEKLVDYVMRFQTPRTPKGDKMTHKHDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKELEKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHYGMAHADADNDGYIVEDELDKLVDYAEKFQHKRQC

Homology

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BLAST of Clc08G16400 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 9.1e-72
Identity = 136/163 (83.44%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 97  HDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADD 156
           +DKKKSGYKLQKEEMK +FREHDFNGDGRLSIKELSR FG  GAF PLYRAA GLF+ADD
Sbjct: 6   YDKKKSGYKLQKEEMKEMFREHDFNGDGRLSIKELSRAFGQFGAFFPLYRAAFGLFLADD 65

Query: 157 DGDGFITEKELEKVVDYAIK-CKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGS 216
           DGDGFI+E+EL+KVVDYAIK  +LQLSREDIKEIFREHDIDGDGRLSMNE++KAFG  GS
Sbjct: 66  DGDGFISEQELDKVVDYAIKSTRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGS 125

Query: 217 ILPFYKAHYGMAHADADNDGYIVEDELDKLVDYAEKFQHKRQC 259
           ILPFYKAHYGMAHAD + DG+I E+ELDKLVDYA+KFQHKR+C
Sbjct: 126 ILPFYKAHYGMAHADENGDGFIEEEELDKLVDYAQKFQHKRKC 168

[Close]

BLAST of Clc08G16400 vs. NCBI nr
Match: XP_022144156.1 (probable calcium-binding protein CML15 [Momordica charantia])

HSP 1 Score: 189.9 bits (481), Expect = 2.8e-44
Identity = 108/231 (46.75%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 29  SLTKHEVMQALNTMGAMMSFQKAHYGVGYADKDGDGFVKGEEEMEKLVDYVMRFQTPRTP 88
           SL  H     +N   A    QK        DK+GD  +  EE ++K V++    +    P
Sbjct: 5   SLQLHRGQSHVNEAEASEMIQK-------YDKNGDSIITKEEIVDKAVNH----KANVVP 64

Query: 89  KGDKMTHK--HDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYR 148
           K  K+  +  ++KK    K  + ++K IF EHD +GDG LS+ EL + F  LG+ +PLY+
Sbjct: 65  KAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYK 124

Query: 149 AACGLFIADDDGDGFITEKELEKVVDYAIK------CKLQLSREDIKEIFREHDIDGDGR 208
           A  GL  ADDDGDG I+E+EL+K+VDYA K        + LSRE +KEIF+ HD + DG 
Sbjct: 125 AHYGLAFADDDGDGLISEEELDKLVDYAEKGSDRKTSNMPLSREHMKEIFKYHDSNKDGF 184

Query: 209 LSMNEVMKAFGFLGSILPFYKAHYGMAHADADNDGYIVEDELDKLVDYAEK 252
           L++ E+ KAFGFLGSI+PF KAHYG+ HADA+NDG I E ELDKL+DYA K
Sbjct: 185 LNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYK 224

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BLAST of Clc08G16400 vs. NCBI nr
Match: KAA0060893.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-33
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 97  HDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADD 156
           +DKKKSGYKLQKEEMK IFREHDFNGDGRLSIKELSR FGS GAF PLYRAA GLF+ADD
Sbjct: 6   YDKKKSGYKLQKEEMKQIFREHDFNGDGRLSIKELSRAFGSFGAFFPLYRAAFGLFVADD 65

Query: 157 DGDGFITEKELEKVVDYAIKCKLQL 182
           DGDGFI+E+ELEKVVDYAIKCK  L
Sbjct: 66  DGDGFISEQELEKVVDYAIKCKYNL 90

[Close]

BLAST of Clc08G16400 vs. NCBI nr
Match: KGN62514.1 (hypothetical protein Csa_021819 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 6.4e-33
Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1  MALSRSQLKLTRDEVREILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADK 60
          MA+SRSQLKLTRDEVREIL+EHDVDGDGSLTK EVMQALN+MG+MMSFQKAHYGV +ADK
Sbjct: 1  MAMSRSQLKLTRDEVREILEEHDVDGDGSLTKQEVMQALNSMGSMMSFQKAHYGVSHADK 60

Query: 61 DGDGFVK-GEEEMEKLVDYVMRFQTPRTPKGDKM 94
          DGDG V  GE EME L+DYVMRFQTPR PK  K+
Sbjct: 61 DGDGKVDLGEAEMENLIDYVMRFQTPRAPKTPKV 94

[Close]

BLAST of Clc08G16400 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-32
Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 178 KLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHYGMAHADADNDGYI 237
           KLQLSREDIKEIFREHDIDGDGRLS++E++KAFGF GSILPFYKAHYGMAHAD + DGYI
Sbjct: 7   KLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADENGDGYI 66

Query: 238 VEDELDKLVDYAEKFQHKRQC 259
            E+ELDKLVDYAEKFQHKR+C
Sbjct: 67  EEEELDKLVDYAEKFQHKRKC 87

[Close]

BLAST of Clc08G16400 vs. ExPASy Swiss-Prot
Match: P25071 (Calmodulin-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=CML12 PE=1 SV=3)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 79/272 (29.04%), Postives = 111/272 (40.81%), Query Frame = 0


Query: 9   KLTRDEV---REILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADKDGDGF 68
           KLT D++   RE  +  D +GDGS+TK E+   + ++G   +       +  AD DGDG 
Sbjct: 4   KLTDDQITEYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGT 63

Query: 69  VKGEEEMEKLVDYVMRFQTPRTPKGDKMTHKHDKKKSGYKL---QKEEMKAIFREHDFNG 128
           +   E +  +       Q PR          H KK    KL   Q  E +  FR  D NG
Sbjct: 64  IDFPEFLCVMAKNQGHDQAPR----------HTKKTMADKLTDDQITEYRESFRLFDKNG 123

Query: 129 DGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKEL--------------- 188
           DG ++ KEL  V  SLG           +   D DGDG I   E                
Sbjct: 124 DGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPR 183

Query: 189 ---EKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHY 248
              + +VDY +     L   + +E FR  D +GDG +++NE+      LG      +   
Sbjct: 184 HTKKTMVDYQLTDDQIL---EFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQD 243

Query: 249 GMAHADADNDGYIVEDEL-----DKLVDYAEK 252
            +  ADAD DG I   E       K++D   K
Sbjct: 244 MINEADADGDGTISFSEFVCVMTGKMIDTQSK 262

[Close]

BLAST of Clc08G16400 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.5e-11
Identity = 47/157 (29.94%), Postives = 72/157 (45.86%), Query Frame = 0


Query: 94  THKHDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFI 153
           T+     KS       E+K +F + D NGDG++S+ EL  VF S+G           L  
Sbjct: 4   TNLESTNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDE 63

Query: 154 ADDDGDGFITEKELEKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFL 213
            D D DGFI ++E      +A  C+   S  +I+E F  +D + +G +S +E+ K    L
Sbjct: 64  IDIDCDGFINQEE------FATICRSSSSAVEIREAFDLYDQNKNGLISSSEIHKVLNRL 123

Query: 214 GSILPFYKAHYGMAHADADNDGYIVEDELDKLVDYAE 251
           G           + H D D DG +  +E  K++   E
Sbjct: 124 GMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSSPE 154

[Close]

BLAST of Clc08G16400 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.3e-11
Identity = 45/134 (33.58%), Postives = 65/134 (48.51%), Query Frame = 0


Query: 108 KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKEL 167
           +EEM+ +FR+ D NGDGR+S  EL  +F SLG        A  +  AD DGDGFI+  E 
Sbjct: 38  EEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEF 97

Query: 168 EKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHYGMA 227
              ++           ED++  FR  D DG+G +S  E+ +    LG      +    + 
Sbjct: 98  -AALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIE 157

Query: 228 HADADNDGYIVEDE 242
             D + DG I  +E
Sbjct: 158 GVDQNGDGLISFEE 170

[Close]

BLAST of Clc08G16400 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-10
Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 99  KKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDG 158
           K +SG K +  E++A+F++ D NGDG++S KEL  +  SLG  +P       +   D  G
Sbjct: 27  KARSG-KTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKG 86

Query: 159 DGFITEKELEKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILP 218
           DG+I  +E  ++    +     L  E++K+ F  +DIDG+G +S  E+ +    LG    
Sbjct: 87  DGYINFEEFVELNTKGMDQNDVL--ENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECS 146

Query: 219 FYKAHYGMAHADADNDGYIVEDE 242
             +    +   D D DG I  +E
Sbjct: 147 IAECRKMIGGVDKDGDGTIDFEE 166

[Close]

BLAST of Clc08G16400 vs. ExPASy Swiss-Prot
Match: P25070 (Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 6.7e-09
Identity = 40/140 (28.57%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 109 EEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKELE 168
           +++K +F+  D NGDG++S+ EL  V  +L            +   D DG+GFI   E  
Sbjct: 16  DDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFV 75

Query: 169 KVVDYAI--KCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHYGM 228
            +    I      +    D+KE F  +D+DG+GR+S  E+      LG           +
Sbjct: 76  ALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMI 135

Query: 229 AHADADNDGYIVEDELDKLV 247
           +  D D DG +  DE  K++
Sbjct: 136 SKVDIDGDGCVNFDEFKKMM 155

[Close]

BLAST of Clc08G16400 vs. ExPASy TrEMBL
Match: A0A6J1CSH1 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111013915 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 108/231 (46.75%), Postives = 144/231 (62.34%), Query Frame = 0


Query: 29  SLTKHEVMQALNTMGAMMSFQKAHYGVGYADKDGDGFVKGEEEMEKLVDYVMRFQTPRTP 88
           SL  H     +N   A    QK        DK+GD  +  EE ++K V++    +    P
Sbjct: 5   SLQLHRGQSHVNEAEASEMIQK-------YDKNGDSIITKEEIVDKAVNH----KANVVP 64

Query: 89  KGDKMTHK--HDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYR 148
           K  K+  +  ++KK    K  + ++K IF EHD +GDG LS+ EL + F  LG+ +PLY+
Sbjct: 65  KAQKVPARVANEKKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYK 124

Query: 149 AACGLFIADDDGDGFITEKELEKVVDYAIK------CKLQLSREDIKEIFREHDIDGDGR 208
           A  GL  ADDDGDG I+E+EL+K+VDYA K        + LSRE +KEIF+ HD + DG 
Sbjct: 125 AHYGLAFADDDGDGLISEEELDKLVDYAEKGSDRKTSNMPLSREHMKEIFKYHDSNKDGF 184

Query: 209 LSMNEVMKAFGFLGSILPFYKAHYGMAHADADNDGYIVEDELDKLVDYAEK 252
           L++ E+ KAFGFLGSI+PF KAHYG+ HADA+NDG I E ELDKL+DYA K
Sbjct: 185 LNVRELTKAFGFLGSIIPFCKAHYGLVHADANNDGLINETELDKLIDYAYK 224

[Close]

BLAST of Clc08G16400 vs. ExPASy TrEMBL
Match: A0A5A7UY46 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00260 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.1e-34
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 97  HDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADD 156
           +DKKKSGYKLQKEEMK IFREHDFNGDGRLSIKELSR FGS GAF PLYRAA GLF+ADD
Sbjct: 6   YDKKKSGYKLQKEEMKQIFREHDFNGDGRLSIKELSRAFGSFGAFFPLYRAAFGLFVADD 65

Query: 157 DGDGFITEKELEKVVDYAIKCKLQL 182
           DGDGFI+E+ELEKVVDYAIKCK  L
Sbjct: 66  DGDGFISEQELEKVVDYAIKCKYNL 90

[Close]

BLAST of Clc08G16400 vs. ExPASy TrEMBL
Match: A0A0A0LNG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357860 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.1e-33
Identity = 77/94 (81.91%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1  MALSRSQLKLTRDEVREILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADK 60
          MA+SRSQLKLTRDEVREIL+EHDVDGDGSLTK EVMQALN+MG+MMSFQKAHYGV +ADK
Sbjct: 1  MAMSRSQLKLTRDEVREILEEHDVDGDGSLTKQEVMQALNSMGSMMSFQKAHYGVSHADK 60

Query: 61 DGDGFVK-GEEEMEKLVDYVMRFQTPRTPKGDKM 94
          DGDG V  GE EME L+DYVMRFQTPR PK  K+
Sbjct: 61 DGDGKVDLGEAEMENLIDYVMRFQTPRAPKTPKV 94

[Close]

BLAST of Clc08G16400 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33
Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 178 KLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHYGMAHADADNDGYI 237
           KLQLSREDIKEIFREHDIDGDGRLS++E++KAFGF GSILPFYKAHYGMAHAD + DGYI
Sbjct: 7   KLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADENGDGYI 66

Query: 238 VEDELDKLVDYAEKFQHKRQC 259
            E+ELDKLVDYAEKFQHKR+C
Sbjct: 67  EEEELDKLVDYAEKFQHKRKC 87

[Close]

BLAST of Clc08G16400 vs. ExPASy TrEMBL
Match: A0A5A7V4S6 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00280 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.0e-33
Identity = 80/105 (76.19%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MALSRSQLKLTRDEVREILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADK 60
           MA+SRSQLKLTRDEVREIL+EHDVDGDG+LTK EVMQALN+MGA+MSFQKAHYGV +ADK
Sbjct: 1   MAMSRSQLKLTRDEVREILEEHDVDGDGNLTKQEVMQALNSMGALMSFQKAHYGVSHADK 60

Query: 61  DGDGFV--KGEEEMEKLVDYVMRFQTPRTPKGDKMTHK---HDKK 101
           DGDG V    E+E+EKLVDYVMRFQTPRTPK  K+  +   HD K
Sbjct: 61  DGDGKVDLTREDELEKLVDYVMRFQTPRTPKVPKVPAQKPCHDGK 105

[Close]

BLAST of Clc08G16400 vs. TAIR 10
Match: AT2G41100.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12
Identity = 79/272 (29.04%), Postives = 111/272 (40.81%), Query Frame = 0


Query: 9   KLTRDEV---REILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADKDGDGF 68
           KLT D++   RE  +  D +GDGS+TK E+   + ++G   +       +  AD DGDG 
Sbjct: 4   KLTDDQITEYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGT 63

Query: 69  VKGEEEMEKLVDYVMRFQTPRTPKGDKMTHKHDKKKSGYKL---QKEEMKAIFREHDFNG 128
           +   E +  +       Q PR          H KK    KL   Q  E +  FR  D NG
Sbjct: 64  IDFPEFLCVMAKNQGHDQAPR----------HTKKTMADKLTDDQITEYRESFRLFDKNG 123

Query: 129 DGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKEL--------------- 188
           DG ++ KEL  V  SLG           +   D DGDG I   E                
Sbjct: 124 DGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPR 183

Query: 189 ---EKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHY 248
              + +VDY +     L   + +E FR  D +GDG +++NE+      LG      +   
Sbjct: 184 HTKKTMVDYQLTDDQIL---EFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQD 243

Query: 249 GMAHADADNDGYIVEDEL-----DKLVDYAEK 252
            +  ADAD DG I   E       K++D   K
Sbjct: 244 MINEADADGDGTISFSEFVCVMTGKMIDTQSK 262

[Close]

BLAST of Clc08G16400 vs. TAIR 10
Match: AT2G41100.4 (Calcium-binding EF hand family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12
Identity = 79/272 (29.04%), Postives = 111/272 (40.81%), Query Frame = 0


Query: 9   KLTRDEV---REILQEHDVDGDGSLTKHEVMQALNTMGAMMSFQKAHYGVGYADKDGDGF 68
           KLT D++   RE  +  D +GDGS+TK E+   + ++G   +       +  AD DGDG 
Sbjct: 4   KLTDDQITEYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGT 63

Query: 69  VKGEEEMEKLVDYVMRFQTPRTPKGDKMTHKHDKKKSGYKL---QKEEMKAIFREHDFNG 128
           +   E +  +       Q PR          H KK    KL   Q  E +  FR  D NG
Sbjct: 64  IDFPEFLCVMAKNQGHDQAPR----------HTKKTMADKLTDDQITEYRESFRLFDKNG 123

Query: 129 DGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKEL--------------- 188
           DG ++ KEL  V  SLG           +   D DGDG I   E                
Sbjct: 124 DGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPR 183

Query: 189 ---EKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHY 248
              + +VDY +     L   + +E FR  D +GDG +++NE+      LG      +   
Sbjct: 184 HTKKTMVDYQLTDDQIL---EFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQD 243

Query: 249 GMAHADADNDGYIVEDEL-----DKLVDYAEK 252
            +  ADAD DG I   E       K++D   K
Sbjct: 244 MINEADADGDGTISFSEFVCVMTGKMIDTQSK 262

[Close]

BLAST of Clc08G16400 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 69.7 bits (169), Expect = 3.9e-12
Identity = 47/157 (29.94%), Postives = 72/157 (45.86%), Query Frame = 0


Query: 94  THKHDKKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFI 153
           T+     KS       E+K +F + D NGDG++S+ EL  VF S+G           L  
Sbjct: 4   TNLESTNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDE 63

Query: 154 ADDDGDGFITEKELEKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFL 213
            D D DGFI ++E      +A  C+   S  +I+E F  +D + +G +S +E+ K    L
Sbjct: 64  IDIDCDGFINQEE------FATICRSSSSAVEIREAFDLYDQNKNGLISSSEIHKVLNRL 123

Query: 214 GSILPFYKAHYGMAHADADNDGYIVEDELDKLVDYAE 251
           G           + H D D DG +  +E  K++   E
Sbjct: 124 GMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSSPE 154

[Close]

BLAST of Clc08G16400 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 99  KKKSGYKLQKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDG 158
           K +SG K +  E++A+F++ D NGDG++S KEL  +  SLG  +P       +   D  G
Sbjct: 27  KARSG-KTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKG 86

Query: 159 DGFITEKELEKVVDYAIKCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILP 218
           DG+I  +E  ++    +     L  E++K+ F  +DIDG+G +S  E+ +    LG    
Sbjct: 87  DGYINFEEFVELNTKGMDQNDVL--ENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECS 146

Query: 219 FYKAHYGMAHADADNDGYIVEDE 242
             +    +   D D DG I  +E
Sbjct: 147 IAECRKMIGGVDKDGDGTIDFEE 166

[Close]

BLAST of Clc08G16400 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-10
Identity = 40/140 (28.57%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 109 EEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFLPLYRAACGLFIADDDGDGFITEKELE 168
           +++K +F+  D NGDG++S+ EL  V  +L            +   D DG+GFI   E  
Sbjct: 16  DDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFV 75

Query: 169 KVVDYAI--KCKLQLSREDIKEIFREHDIDGDGRLSMNEVMKAFGFLGSILPFYKAHYGM 228
            +    I      +    D+KE F  +D+DG+GR+S  E+      LG           +
Sbjct: 76  ALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMI 135

Query: 229 AHADADNDGYIVEDELDKLV 247
           +  D D DG +  DE  K++
Sbjct: 136 SKVDIDGDGCVNFDEFKKMM 155

The following BLAST results are available for this feature:

BLAST of Clc08G16400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152805.1	9.1e-72	83.44	probable calcium-binding protein CML10 [Cucumis sativus]	[more]
XP_022144156.1	2.8e-44	46.75	probable calcium-binding protein CML15 [Momordica charantia]	[more]
KAA0060893.1	1.7e-33	87.06	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]
KGN62514.1	6.4e-33	81.91	hypothetical protein Csa_021819 [Cucumis sativus]	[more]
KAA0060892.1	1.1e-32	86.42	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]

BLAST of Clc08G16400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P25071	1.4e-11	29.04	Calmodulin-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=CML12 PE=1 SV=3	[more]
Q9C9U8	5.5e-11	29.94	Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 ...	[more]
Q8RZB5	9.3e-11	33.58	Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FYK2	1.6e-10	31.47	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ...	[more]
P25070	6.7e-09	28.57	Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2	[more]

BLAST of Clc08G16400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSH1	1.3e-44	46.75	probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5A7UY46	8.1e-34	87.06	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LNG3	3.1e-33	81.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357860 PE=4 SV=1	[more]
A0A5A7UYC0	5.3e-33	86.42	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7V4S6	9.0e-33	76.19	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Clc08G16400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41100.1	1.0e-12	29.04	Calcium-binding EF hand family protein	[more]
AT2G41100.4	1.0e-12	29.04	Calcium-binding EF hand family protein	[more]
AT1G73630.1	3.9e-12	29.94	EF hand calcium-binding protein family	[more]
AT1G24620.1	1.1e-11	31.47	EF hand calcium-binding protein family	[more]
AT5G37770.1	4.7e-10	28.57	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 110..138 e-value: 7.1E-4 score: 28.9 coord: 185..213 e-value: 0.023 score: 23.9 coord: 14..42 e-value: 0.0044 score: 26.2
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 153..210 e-value: 6.4E-9 score: 36.1
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 14..42 e-value: 7.2E-6 score: 25.4 coord: 110..139 e-value: 7.8E-6 score: 25.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 181..216 score: 14.178661
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 106..141 score: 14.06708
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 10..45 score: 13.14653
None	No IPR available	GENE3D	1.10.238.10		coord: 2..96 e-value: 3.8E-9 score: 38.7
None	No IPR available	GENE3D	1.10.238.10		coord: 97..178 e-value: 1.4E-10 score: 42.6 coord: 179..254 e-value: 2.1E-10 score: 42.0
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 7..81 coord: 99..177
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 7..81 coord: 99..177
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 178..252
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 178..252
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 23..35
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 194..206
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 155..167
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 119..131
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 12..133
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 107..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G16400.2	Clc08G16400.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding