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Clc08G15680 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATAATGATGTCAGGAGAACATGATATTAATAATCCTTTAACCGAAAAATCGAACCGATCGGTTCGGTTCACTCGGGGTTGGGCCCAAAACAGGGGAACTGAATCGAAGTTCATCCCTGACTTCAGAGTCGTACGATACCAATAACAATTGATATCGTGCAGAGAAATGGCGGGAAAAATTGGCGCCATTATCGACAATGGAGCTTTTCTCTCCGGTCTTCCTCTATTTAAACCCAATTCAACCTTCTTCTAACTCTACACCGAACTATATCAATTTCAGTTTTCATTCTCATTTCTCTCGAGCCCTAGCAATGGCGCAGAATGGCACCTCAGAAGTTAATGAGCCACAACGATCGCCCAAGGTACAGAAGCTTGCTCACGAGAACGGTGAATCTGAAAATGTCAGCCATTCATCAACGCTTCTCAGAGTAAAGAAGCTGTCAGAGAAAGCCGTCTTGCCAACGCGAGCCTCCGTTCTCTCCGCTGGTTACGATCTTTCCAGGTGAGTCCTCCGAGATTCTGTTCATCTCCATGAACTAATACAGGAAATTTCAGTTCTCGTCACTTATTACACTTTTCTATGTTAATAATACAGCGCAATAGAGACGAAGATCCCTGCACGAGGAAGAGTTTTAGTTCCGACTGATTTGAGCATCGCGATTCCAGAAGGAACTTACGCTCGGATTGGTATTCTCACCTTTAATCCTGCATATTTATTGTTTTCTTAGGCTTATACTGAAGCATTTTGGCTATTTTGCAGCGCCGCGATCGGGCTTGGCTTTGAAGCATGCGATCGATGTTGGTGCGGGTGTGATTGATGCTGATTACAGGGGCCCTGTGGGAGTGATATTATTCAATCACTCTGACGTGGACTTTGAGGTGAAAGCCGGCGACCGGATCGCACAGATGATTCTTGAGAAAATTATTACGCCGGAAGTGATGGAGGTCGAGGATTTGGATTCCACTCTCAGAGGCGAAGCTGGCTTCGGCTCTACAGGTGTTTGAGAGATCTCTCTACCTGCTTAGAAATGGCGGAATTCCAGTTCTTTTTCCCATTTTGCATCTCAAAACTACATCAAACTTTTTCTTTTTTGTTGAACATATGATCATCAGGAAAAAGAACTTCGTTTTGTATCTTGCTACTTCAATCAATGAATTATTAAAAATTTCGG TTATAATGATGTCAGGAGAACATGATATTAATAATCCTTTAACCGAAAAATCGAACCGATCGGTTCGGTTCACTCGGGGTTGGGCCCAAAACAGGGGAACTGAATCGAAGTTCATCCCTGACTTCAGAGTCGTACGATACCAATAACAATTGATATCGTGCAGAGAAATGGCGGGAAAAATTGGCGCCATTATCGACAATGGAGCTTTTCTCTCCGGTCTTCCTCTATTTAAACCCAATTCAACCTTCTTCTAACTCTACACCGAACTATATCAATTTCAGTTTTCATTCTCATTTCTCTCGAGCCCTAGCAATGGCGCAGAATGGCACCTCAGAAGTTAATGAGCCACAACGATCGCCCAAGGTACAGAAGCTTGCTCACGAGAACGGTGAATCTGAAAATGTCAGCCATTCATCAACGCTTCTCAGAGTAAAGAAGCTGTCAGAGAAAGCCGTCTTGCCAACGCGAGCCTCCGTTCTCTCCGCTGGTTACGATCTTTCCAGCGCAATAGAGACGAAGATCCCTGCACGAGGAAGAGTTTTAGTTCCGACTGATTTGAGCATCGCGATTCCAGAAGGAACTTACGCTCGGATTGCGCCGCGATCGGGCTTGGCTTTGAAGCATGCGATCGATGTTGGTGCGGGTGTGATTGATGCTGATTACAGGGGCCCTGTGGGAGTGATATTATTCAATCACTCTGACGTGGACTTTGAGGTGAAAGCCGGCGACCGGATCGCACAGATGATTCTTGAGAAAATTATTACGCCGGAAGTGATGGAGGTCGAGGATTTGGATTCCACTCTCAGAGGCGAAGCTGGCTTCGGCTCTACAGGTGTTTGAGAGATCTCTCTACCTGCTTAGAAATGGCGGAATTCCAGTTCTTTTTCCCATTTTGCATCTCAAAACTACATCAAACTTTTTCTTTTTTGTTGAACATATGATCATCAGGAAAAAGAACTTCGTTTTGTATCTTGCTACTTCAATCAATGAATTATTAAAAATTTCGG ATGGAGCTTTTCTCTCCGGTCTTCCTCTATTTAAACCCAATTCAACCTTCTTCTAACTCTACACCGAACTATATCAATTTCAGTTTTCATTCTCATTTCTCTCGAGCCCTAGCAATGGCGCAGAATGGCACCTCAGAAGTTAATGAGCCACAACGATCGCCCAAGGTACAGAAGCTTGCTCACGAGAACGGTGAATCTGAAAATGTCAGCCATTCATCAACGCTTCTCAGAGTAAAGAAGCTGTCAGAGAAAGCCGTCTTGCCAACGCGAGCCTCCGTTCTCTCCGCTGGTTACGATCTTTCCAGCGCAATAGAGACGAAGATCCCTGCACGAGGAAGAGTTTTAGTTCCGACTGATTTGAGCATCGCGATTCCAGAAGGAACTTACGCTCGGATTGCGCCGCGATCGGGCTTGGCTTTGAAGCATGCGATCGATGTTGGTGCGGGTGTGATTGATGCTGATTACAGGGGCCCTGTGGGAGTGATATTATTCAATCACTCTGACGTGGACTTTGAGGTGAAAGCCGGCGACCGGATCGCACAGATGATTCTTGAGAAAATTATTACGCCGGAAGTGATGGAGGTCGAGGATTTGGATTCCACTCTCAGAGGCGAAGCTGGCTTCGGCTCTACAGGTGTTTGA MELFSPVFLYLNPIQPSSNSTPNYINFSFHSHFSRALAMAQNGTSEVNEPQRSPKVQKLAHENGESENVSHSSTLLRVKKLSEKAVLPTRASVLSAGYDLSSAIETKIPARGRVLVPTDLSIAIPEGTYARIAPRSGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMILEKIITPEVMEVEDLDSTLRGEAGFGSTGV Homology
BLAST of Clc08G15680 vs. NCBI nr
Match: XP_008444707.1 (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis melo]) HSP 1 Score: 334.0 bits (855), Expect = 9.8e-88 Identity = 175/201 (87.06%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of Clc08G15680 vs. NCBI nr
Match: XP_038884972.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Benincasa hispida]) HSP 1 Score: 328.2 bits (840), Expect = 5.4e-86 Identity = 173/194 (89.18%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Clc08G15680 vs. NCBI nr
Match: XP_004152704.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis sativus] >KGN62592.1 hypothetical protein Csa_022444 [Cucumis sativus]) HSP 1 Score: 327.4 bits (838), Expect = 9.1e-86 Identity = 171/202 (84.65%), Postives = 182/202 (90.10%), Query Frame = 0
BLAST of Clc08G15680 vs. NCBI nr
Match: KAA0065242.1 (deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis melo var. makuwa]) HSP 1 Score: 310.8 bits (795), Expect = 8.9e-81 Identity = 161/175 (92.00%), Postives = 167/175 (95.43%), Query Frame = 0
BLAST of Clc08G15680 vs. NCBI nr
Match: XP_022996788.1 (LOW QUALITY PROTEIN: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucurbita maxima]) HSP 1 Score: 308.5 bits (789), Expect = 4.4e-80 Identity = 161/200 (80.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy Swiss-Prot
Match: Q9STG6 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana OX=3702 GN=DUT PE=1 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 1.9e-62 Identity = 123/167 (73.65%), Postives = 143/167 (85.63%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy Swiss-Prot
Match: P32518 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 3.3e-62 Identity = 127/178 (71.35%), Postives = 148/178 (83.15%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy Swiss-Prot
Match: Q10FF9 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=DUT PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.1e-60 Identity = 121/177 (68.36%), Postives = 140/177 (79.10%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy Swiss-Prot
Match: Q6MVL2 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dut-1 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.3e-47 Identity = 94/138 (68.12%), Postives = 114/138 (82.61%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy Swiss-Prot
Match: Q54BW5 (Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=dut PE=1 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.1e-47 Identity = 92/137 (67.15%), Postives = 112/137 (81.75%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy TrEMBL
Match: A0A1S3BBU3 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis melo OX=3656 GN=LOC103487963 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.7e-88 Identity = 175/201 (87.06%), Postives = 184/201 (91.54%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy TrEMBL
Match: A0A0A0LPA0 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G361570 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 4.4e-86 Identity = 171/202 (84.65%), Postives = 182/202 (90.10%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy TrEMBL
Match: A0A5A7VA97 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005830 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.3e-81 Identity = 161/175 (92.00%), Postives = 167/175 (95.43%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy TrEMBL
Match: A0A6J1KC08 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucurbita maxima OX=3661 GN=LOC111491919 PE=3 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80 Identity = 161/200 (80.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of Clc08G15680 vs. ExPASy TrEMBL
Match: A0A6J1HDM4 (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111462556 PE=3 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80 Identity = 161/200 (80.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of Clc08G15680 vs. TAIR 10
Match: AT3G46940.1 (DUTP-PYROPHOSPHATASE-LIKE 1 ) HSP 1 Score: 240.4 bits (612), Expect = 1.4e-63 Identity = 123/167 (73.65%), Postives = 143/167 (85.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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