Clc08G15490 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G15490
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DNA polymerase epsilon catalytic subunit A, putative
Location	ClcChr08: 26293533 .. 26294530 (+)
RNA-Seq Expression	Clc08G15490
Synteny	Clc08G15490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAACTTCATGTAAAAGCTTTTTCTTTCGCTCCTTTTCTGTGACCTAAACTTCTGTAGCAGAGAAATGGGCTCTCTAATGGGCGGATGGAACTCTCCCGTTCTTGATCCTAAATCAGGTAATTGAAGTGAGTTTTGTTCGTATTTTTTCATTGATTTGTTAATGATTCATCACATTATGTACTATTTTTGTTATGGAGGTTAGTTAAATCATGTATATTAACTTCGAAATTTCAGTCAAGTTCAAGAGAAACCGGTCGCTTACGAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGGTTTCTATGCCGGTGGATCGTTATGTTGATCGCGAAACAGTCGGAATAGGCTACAAAAGATCGAGTTCGTTTCCGCCGGTGAAGGACGTTGCGGCGGAAGCAGAACTTGCACAGAACGATTTGGAGAGGGAAAACCTAGAGAAATTGAAGAAAATTGGCTGGTAAATTGAAATCGCGTAATAGTTAACTACTTGATCGCGGATCTTAGTGCTTGAAATTTATATGAACGAAAATAATGAATTAGCAGAGATCATGTGTGCGGTTGTTTAATTCTCTGTTTTTGTGCAGGTGGACGAGGAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTACAAAAGCTTACGCGTCGTTGTACGGCGTCTCCGACGTGGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAGTTACACTGAAACTGCGTGAAAAAGAAAAGAGAAGTTAAGATAAGAATATCAGTCCGTTATGTAAAATTAATATATTATAAATATGTTTTATATTATATACATATTGTAAGATTTCAGTTCTGTCTGGTTTGTAATTTGGGATTTGAAACTCTAATTTAACTTTCTTTTCTCTGTTTTTCTTTTTTCTGTTCTTCCACGTTAACGGATAATTGATACATGAATATATATATCACATTGGTTTTTTTT

mRNA sequence

AAGAACTTCATGTAAAAGCTTTTTCTTTCGCTCCTTTTCTGTGACCTAAACTTCTGTAGCAGAGAAATGGGCTCTCTAATGGGCGGATGGAACTCTCCCGTTCTTGATCCTAAATCAGTCAAGTTCAAGAGAAACCGGTCGCTTACGAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGGTTTCTATGCCGGTGGATCGTTATGTTGATCGCGAAACAGTCGGAATAGGCTACAAAAGATCGAGTTCGTTTCCGCCGGTGAAGGACGTTGCGGCGGAAGCAGAACTTGCACAGAACGATTTGGAGAGGGAAAACCTAGAGAAATTGAAGAAAATTGGCTGGTGGACGAGGAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTACAAAAGCTTACGCGTCGTTGTACGGCGTCTCCGACGTGGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAGTTACACTGAAACTGCGTGAAAAAGAAAAGAGAAGTTAAGATAAGAATATCAGTCCGTTATGTAAAATTAATATATTATAAATATGTTTTATATTATATACATATTGTAAGATTTCAGTTCTGTCTGGTTTGTAATTTGGGATTTGAAACTCTAATTTAACTTTCTTTTCTCTGTTTTTCTTTTTTCTGTTCTTCCACGTTAACGGATAATTGATACATGAATATATATATCACATTGGTTTTTTTT

Coding sequence (CDS)

ATGGGCTCTCTAATGGGCGGATGGAACTCTCCCGTTCTTGATCCTAAATCAGTCAAGTTCAAGAGAAACCGGTCGCTTACGAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGGTTTCTATGCCGGTGGATCGTTATGTTGATCGCGAAACAGTCGGAATAGGCTACAAAAGATCGAGTTCGTTTCCGCCGGTGAAGGACGTTGCGGCGGAAGCAGAACTTGCACAGAACGATTTGGAGAGGGAAAACCTAGAGAAATTGAAGAAAATTGGCTGGTGGACGAGGAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTACAAAAGCTTACGCGTCGTTGTACGGCGTCTCCGACGTGGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAG

Protein sequence

MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRETVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGATKAYASLYGVSDVASCKLNHSNGVGA

Homology

[Close]

BLAST of Clc08G15490 vs. NCBI nr
Match: XP_038886573.1 (uncharacterized protein LOC120076743 [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 131/146 (89.73%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTK+EIEAYW+SK+K EEEHLRA+SMPVDRY+DRE
Sbjct: 1   MGSLMSGWNSPVLDPKSVKFKRNRSLTKDEIEAYWKSKKKSEEEHLRAISMPVDRYIDRE 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
           TVGI YKRSSSFPP KDV+AEAE A+NDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPPAKDVSAEAEFAENDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVASCKLNHSNGVGA 147
           TK YASLYGV+DVASCKLNHSNGVG+
Sbjct: 121 TKGYASLYGVADVASCKLNHSNGVGS 146

[Close]

BLAST of Clc08G15490 vs. NCBI nr
Match: XP_008444729.1 (PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo] >KAA0065224.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63
Identity = 119/146 (81.51%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRA+S+PVDRY DRE
Sbjct: 1   MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DRE 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
            VGI YKRSSSFPP +DVA E++  +N L+R+NLE+L+K+GWWTRSNSAFLNEPPVLDGA
Sbjct: 61  KVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVASCKLNHSNGVGA 147
           +KA  SLYGV+DVASCKLNH+NGVGA
Sbjct: 121 SKACVSLYGVADVASCKLNHNNGVGA 145

[Close]

BLAST of Clc08G15490 vs. NCBI nr
Match: XP_004152691.1 (uncharacterized protein LOC101215562 [Cucumis sativus] >KGN62611.1 hypothetical protein Csa_022203 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 122/147 (82.99%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLE+EHLRAVS+PVD   D E
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEKEHLRAVSLPVDDRYDCE 60

Query: 61  TVGIGYKRSSSFPPVK-DVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDG 120
           TVG+ YKRSSSFPP K DVA EA+  +N ++R+NLE+LKKIGWWTRSNSAFLNEPPVLDG
Sbjct: 61  TVGLDYKRSSSFPPAKDDVAVEAKFVENKMDRKNLEELKKIGWWTRSNSAFLNEPPVLDG 120

Query: 121 ATKAYASLYGVSDVASCKLNHSNGVGA 147
           A+KA  SLYGV+DVASCKLNHSNGVGA
Sbjct: 121 ASKACVSLYGVADVASCKLNHSNGVGA 147

[Close]

BLAST of Clc08G15490 vs. NCBI nr
Match: XP_022144322.1 (uncharacterized protein LOC111014033 [Momordica charantia])

HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54
Identity = 111/146 (76.03%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRA+SMPVD +VDR+
Sbjct: 1   MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRD 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
            VGI YKRSSSFPP    A E  + ++D ER+NLEKLK   WWTRSNSAFLNEPPVLDGA
Sbjct: 61  VVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPNDWWTRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVASCKLNHSNGVGA 147
            KAYA        AS KLNHSNG+GA
Sbjct: 121 AKAYA--------ASFKLNHSNGIGA 138

[Close]

BLAST of Clc08G15490 vs. NCBI nr
Match: XP_023002545.1 (uncharacterized protein LOC111496358 [Cucurbita maxima])

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRA+SMP    VDR+
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDRD 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
           TVGI YKRSSSFP     A +   A++DLER+NLEKLKK GWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGAAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVAS 136
            KAYAS YGV+DVAS
Sbjct: 121 AKAYASQYGVTDVAS 131

[Close]

BLAST of Clc08G15490 vs. ExPASy TrEMBL
Match: A0A5A7VD66 (Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005630 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 119/146 (81.51%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRA+S+PVDRY DRE
Sbjct: 1   MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DRE 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
            VGI YKRSSSFPP +DVA E++  +N L+R+NLE+L+K+GWWTRSNSAFLNEPPVLDGA
Sbjct: 61  KVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVASCKLNHSNGVGA 147
           +KA  SLYGV+DVASCKLNH+NGVGA
Sbjct: 121 SKACVSLYGVADVASCKLNHNNGVGA 145

[Close]

BLAST of Clc08G15490 vs. ExPASy TrEMBL
Match: A0A1S3BBS7 (uncharacterized protein LOC103487979 OS=Cucumis melo OX=3656 GN=LOC103487979 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 119/146 (81.51%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRA+S+PVDRY DRE
Sbjct: 1   MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DRE 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
            VGI YKRSSSFPP +DVA E++  +N L+R+NLE+L+K+GWWTRSNSAFLNEPPVLDGA
Sbjct: 61  KVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVASCKLNHSNGVGA 147
           +KA  SLYGV+DVASCKLNH+NGVGA
Sbjct: 121 SKACVSLYGVADVASCKLNHNNGVGA 145

[Close]

BLAST of Clc08G15490 vs. ExPASy TrEMBL
Match: A0A0A0LRI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361750 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-63
Identity = 122/147 (82.99%), Postives = 134/147 (91.16%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLE+EHLRAVS+PVD   D E
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEKEHLRAVSLPVDDRYDCE 60

Query: 61  TVGIGYKRSSSFPPVK-DVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDG 120
           TVG+ YKRSSSFPP K DVA EA+  +N ++R+NLE+LKKIGWWTRSNSAFLNEPPVLDG
Sbjct: 61  TVGLDYKRSSSFPPAKDDVAVEAKFVENKMDRKNLEELKKIGWWTRSNSAFLNEPPVLDG 120

Query: 121 ATKAYASLYGVSDVASCKLNHSNGVGA 147
           A+KA  SLYGV+DVASCKLNHSNGVGA
Sbjct: 121 ASKACVSLYGVADVASCKLNHSNGVGA 147

[Close]

BLAST of Clc08G15490 vs. ExPASy TrEMBL
Match: A0A6J1CTD0 (uncharacterized protein LOC111014033 OS=Momordica charantia OX=3673 GN=LOC111014033 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54
Identity = 111/146 (76.03%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLM GWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRA+SMPVD +VDR+
Sbjct: 1   MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRD 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
            VGI YKRSSSFPP    A E  + ++D ER+NLEKLK   WWTRSNSAFLNEPPVLDGA
Sbjct: 61  VVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPNDWWTRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVASCKLNHSNGVGA 147
            KAYA        AS KLNHSNG+GA
Sbjct: 121 AKAYA--------ASFKLNHSNGIGA 138

[Close]

BLAST of Clc08G15490 vs. ExPASy TrEMBL
Match: A0A6J1KP90 (uncharacterized protein LOC111496358 OS=Cucurbita maxima OX=3661 GN=LOC111496358 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.8e-53
Identity = 109/135 (80.74%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPVDRYVDRE 60
           MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRA+SMP    VDR+
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDRD 60

Query: 61  TVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120
           TVGI YKRSSSFP     A +   A++DLER+NLEKLKK GWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGAAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 TKAYASLYGVSDVAS 136
            KAYAS YGV+DVAS
Sbjct: 121 AKAYASQYGVTDVAS 131

[Close]

BLAST of Clc08G15490 vs. TAIR 10
Match: AT1G19530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 4.0e-14
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAVSMPVDRYVDR 60
           MGSLM GW+S V DPKSV  +R +SLT+EEI+ +W++K+K  EEEH++A S  V      
Sbjct: 1   MGSLMSGWDSRVRDPKSV--RRCKSLTREEIDTFWKTKKKNEEEEHVQAFSKLV------ 60

Query: 61  ETVGIGYKRSSSFPPVKDVAAEAELAQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDG 120
                   +  +    K+  +  +L +N        + K  GWW ++  AFLNEP   +G
Sbjct: 61  -------TQEGAQSQAKEKKSVDDLFEN--------QSKSSGWWRKTYWAFLNEPREEEG 112

Query: 121 ATKAYASLYGVSDVA 135
               Y S + V+ +A
Sbjct: 121 RPNNYVSQFKVAHIA 112

The following BLAST results are available for this feature:

BLAST of Clc08G15490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886573.1	1.7e-70	89.73	uncharacterized protein LOC120076743 [Benincasa hispida]	[more]
XP_008444729.1	5.7e-63	81.51	PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo] >KAA0065224.1 put...	[more]
XP_004152691.1	1.7e-62	82.99	uncharacterized protein LOC101215562 [Cucumis sativus] >KGN62611.1 hypothetical ...	[more]
XP_022144322.1	8.3e-54	76.03	uncharacterized protein LOC111014033 [Momordica charantia]	[more]
XP_023002545.1	1.2e-52	80.74	uncharacterized protein LOC111496358 [Cucurbita maxima]	[more]

BLAST of Clc08G15490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc08G15490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD66	2.8e-63	81.51	Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BBS7	2.8e-63	81.51	uncharacterized protein LOC103487979 OS=Cucumis melo OX=3656 GN=LOC103487979 PE=...	[more]
A0A0A0LRI3	8.0e-63	82.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361750 PE=4 SV=1	[more]
A0A6J1CTD0	4.0e-54	76.03	uncharacterized protein LOC111014033 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1KP90	5.8e-53	80.74	uncharacterized protein LOC111496358 OS=Cucurbita maxima OX=3661 GN=LOC111496358...	[more]

BLAST of Clc08G15490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19530.1	4.0e-14	36.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..100
None	No IPR available	PANTHER	PTHR33872	DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A	coord: 1..135
None	No IPR available	PANTHER	PTHR33872:SF2	DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G15490.1	Clc08G15490.1	mRNA