Clc08G14070 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGTAAAAGACAATTAAAAAAATATCGAGTAAAAAGGACGAAATTTGTATATTTGTGTTTTCTTTAATTTCTATTATATATTTCTTTTGTTAGAAAAGACAACAAATAAGCAGATGTAGACATAGGTTTGGCAATTTTCAGACGTTGCCTATTTATGGTAAATATGCTTAGTTGTTAAACCAATTTAAGCTGGAAATCCACTATCTCCAAATACAAAAGAAAAGGAAAACCCATCCATACATTCCTGTTGGGGAAAAAAAATAAATTTGTAGTCGAAGAGAACCTCACAATTCGAAGTCAAGGTACAACCAAAACAAAAACACAACCAAAAGACTTACAACAAACAAGAACAAACAAAAGAAAATCAAGGAAAGAGTCCTAAAGAGGAGAACTTGCTCGAGTCCCATCAATAGAAACCCCAAATCATTGCATACAATAGAGAAAAGTTACATAATTTGACTAATCATATGCAAGGTAGCTCCATGGACACAAATATTTTGCTTATGCTAAATATATGATAGACTACAACATATCAAGCGACTATCTAAACCTTACGCTTAAATGATTACTCGCACTAAAGCGAAAATAATTTGTTTTGATAATTTCGCGCTAATGTAATGTAAGCAAAAAGATTTTAAAAAATAAACATTAGGCCATATTAAAGATAATGTGTACGAAAAACTCATTTTTCATCTTGCTAAATTCTAAGTTCTAAGTTTTGTTTTTTTTAAAAAAAAGACAAAATGAATCCAGCTTAATTGATATATATTACTTGACTTCACTTGAGTTAGATGTTGAAATTCTCGAAAAAAAAGTTTTCTCAAACTAAGCTTTTTCATATATATTTGTTCCACTTATATAAGGATATAAAAGTGTGAAATGATTTAGAATCTTGAATTTTGAGAAAATATTATTGGGCTGCATACAAAAGTTCCGGGCCGGCCCATGTAAAGCCCACCGTAGTTTAACAAACCGAACCTACATTTCGGCGTGGCAGGAGGTAGGTGGGTCCCAAAGTTGTTGTTTTTTTTTTTTTTTTTCAATAAAAAAGGAAAAAAAAAAAAAAAAGAAAAGAAAGAAAGAACGCTGGTTCCCGGTAATATGATATTATTAATTAAAAAGAAAAAGGAAAAGAAAAGGAAAAAGAATGGTGAATACTGGAAAGAGGTGCGGGCCCGAGGCCCCGCCCCCACCCACCCTAATAGCCCACAAAACAAAAACGAATAACTGGAATCTCTTCTCCTTTCCATTTCCAAATTTCCACCACTTTCACTCTCTCTTTCCCCTCTTCTCCCTAACTTCAAATCCCCTTCTTCAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGTTTTTCTTTTCAGACCTCACCCATCTCTCCCCTTCCTTTTCAATTTCCTACCCGCCGCTCAATATGGTGTTGAAGGACGAGTGGTTGTGTGCCGCCATGGCCGATGACAGCGTCGTCGTTGAGTTACTGGTTCGTCTCAAGCAATCCCAAGCCTCTTCTTCGATCAAATCTCCGCTACCTGCCGTTATTCCGCCCAGATGGGGTCTCAGGCAACGCCGTTCCAGGATTCTTTCTCCTTTCCGATTTGATGCCATTGCTCACAAGAATAAGGACTCCACCTCTACCAGATGTAGCCCCACCACTCCTCTCTCTTGGAGTGGCGATACATCACCTTCCGCCACCGCCGATGGATTCGAAGAGTCCAGCCATCCATCCGAATTTTCCCACTCCTCCAGATCCAAGGTTCTTTCTCGATTCTACTATTGTTTCTTTTCCCCCCAATCTTCATTTCCTGTTATTTTTTTCTCTCTCTCTGGTTTTGGGTTAGATACAGAGCCATCGATCTCCACCGTGGCGGTTTCCTTTTACCCTGTATTTGGCGAATTTCTCCGCCGACAAACGAGTATTTCCCTCGTCGTGGCTGACTCTGTAACCCCACGAGATGAATTGCTCGTATTTTGTCAAAGACGCATTTGAACCAAGAACCCCACAATTTCGCTTTCGACGATGGCCCCCTTTTCCTCTGCCTTTCGTTCTTAATAGCGTCGTTAAGTGAAGGGTAATCTAAATCCAGAAGTGAAAGTTTCCGGACGGAACGGAGCCGGTAAGCACTGAATAGTGGTGGGGATCAGAATCATCAGATCGATATTCTTGTCGTCTGAGAACGGCGTTAGAGATAGAATGCGTTTGGTTTTGGCAAAGTCATCGAACAAAGTATGTTGGTTTATCCTCTATTCTCGAGACCAGAGTAATTAGTTTGTGCGCGTATGTCCCACGTACAACTCCCCCATAATCGGACGGCTTGGAATAGAACCATCGAGAAATGGTTCTTTACTCTTTAGCCATTATTATTTGATCCTTTGCCTTTGGGTTCTCAGATCTGAAGGTCAATACAGATGATCTTCTTTTTTTTCCCCTTTTTTTCACATTTTTTTTTCCATTTTAAAGGCCATTAAATTGAAATAAGAGGCACGTGAAGGGTCACGCGAGCAATGGATTGTAAGATTCTCGAGAAGAAATTGGGTTTGAGTTAGATTGATGAGCCAGCATGTGGGTTTGATGATGTGTCATTTAATTACTGGTTTATCAAAATTAAAAAGAAAAAAAATAGAGAGCCCTTTTGTTTTAATTTTTATAAATGTAATTGTGGACTTTTGTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACTCTGTAGTTTCTGATGGGTTGACCTTTTGTGCAGGGTTGTGGTACTAATGAATTCAGTTCTACCACTGCCATGGCCAAGAGGTTAAAAAGAAGGAAGGTAAAATTCCCATCTTGAGTTTACTGTTAGAAATAATAACTAAATCACCTCGCCTAATACACATTTTTTTTTTTTGTTCGAATTCTTGTAATGTCATTTGACGACCGTTTTTGTTCGAATTCTTGTAATGTCATTTGACGACGGTTATTATTGTTAGTCTTTTTTTCTTATCTACTTTATTATTCTGAACCACCTAAACTTTTTTCAGGCGTTGGCTGATCTGAGAGTGGAGGAGTCCTTACTTTTGAAGGAAAGGGTACATCTCAAAAAGGTGTGTTTGCTGTATTAAAGCAAAGAGGGTTCCTGAATTGGAGAGAATTAGAGTAGTAGTCTGGTTGTTTTACTTAATGAATACTAGTTTGTTTGTTTGAAAAGTGCTTTTGGAAAAATTAGTAATTAACCTTCATTTAAAAAACATATCTTCAATCCTTTTGTTAAAGAAATGGTGCTTCTTCATTTTGTTTAATGACATTCTATTGGTTTTGAACAGGAGCTGGAAAGTTTACATGCGACGTTCAAGGAACAGACGACTAACAATGAGAAGTTGAAGAAAATGAAGGTGATTCAAAAATTTCCCCTCAGAACCCAGATGAAAATACTGTCTTAAAATATTAAGAAATGTGAGACCTTGATGTTGATCTTTTGATAATGTATGAACATTAAACGTCTATGGATATTATAATAATATGTGAGCCTGCCCTCTGATCTTCTTGTTGGCTCTTCTGATTTGAACTTCTTATGTTTTTCAGCTCAATCTGAATTTCAATGCATCATCAGACCGTCTTCGGGATGAGTCGAAGCCAGTAGCTCCCCGTCAACAGTGCCAAAGCGTGGATCCTACAACTGACAACGTTCCTGCAACTTCACCAATACAAACCTTACCTGGAACCAGTACACAATCAGAATTGCACGAGACACAGGAGATAAATTCAATGGAAAATGGTGGTTTCTTTTTACCAGATCTTAACATGATCCCAGCTGAGGACTGTCTCTGAAGCTCTCATCAATCATGAGCTGAAGACATGTTTCGACTCGTCAAAGACATTACTTTGAGATCAGCGACTTGTCCCGATGTCAAATGAAGAATGATTTACTGGAGGTCATTCTTCACCATTGAAGTTGATTCTTGAGGTCATAAAGAAAGAAATTGACAGTCATGAGAATTTCGAAACTGGGGACTTTCTTCTGTTGCTGTTTCGAAATTCTTTCGGGTAGAATTCCTTATTGAAATTCATTTCAATACTGTAGGATCAAACATGTTTGATTCTTTGTAGGTAAAAAGAAAAGCTAATCAAAACTTGTTCAATGCTGAAATCTTTGCTCTCTATTCAACCCAATTCTTATTCTATTTTCAGGAAAGCTATCTAACTGACATCAGTTAATGATCGATCATCTCGAGCTGCTGCTGTTAACATTTGGCAAAACAAAACTTTTTTTCTTTTTTCAAATTGAAGATGTTTCATTGGCTCAGAATTCAGAAAACTGCTCGTTGTTTTATCATTTGGCACAGGTGACTTCACAAAAACTGTTCCTTGCTTGGATGGAGGGGAAAAAAGCCTCTTGCTTTTCTTTAATCTTGATTAAAAAAAGAAATTAAAATGGGAAATTGCTGTCAAGCATCATTTTATTGTTTTAATTACAAGAAATACTGGAGTAGAATATTGTTAAGAAGGCTTTTCTATTATGATATATCCTCATTTTTTATTAAAGAAAAAAAGATTGAAAGTAAATACGTGTTTGAAGGTTGAAGATTTCCTTGAACTGTAAGTTTGAAATATATTTATCTTGTATTTATAATAGGTTTTGAGTCAAAGATGA ATGACAGACCTCACCCATCTCTCCCCTTCCTTTTCAATTTCCTACCCGCCGCTCAATATGGTGTTGAAGGACGAGTGGTTGTGTGCCGCCATGGCCGATGACAGCGTCGTCGTTGAGTTACTGGTTCGTCTCAAGCAATCCCAAGCCTCTTCTTCGATCAAATCTCCGCTACCTGCCGTTATTCCGCCCAGATGGGGTCTCAGGCAACGCCGTTCCAGGATTCTTTCTCCTTTCCGATTTGATGCCATTGCTCACAAGAATAAGGACTCCACCTCTACCAGATGTAGCCCCACCACTCCTCTCTCTTGGAGTGGCGATACATCACCTTCCGCCACCGCCGATGGATTCGAAGAGTCCAGCCATCCATCCGAATTTTCCCACTCCTCCAGATCCAAGGTTCTTTCTCGATTCTACTATTGTTTCTTTTCCCCCCAATCTTCATTTCCTGTTATTTTTTTCTCTCTCTCTGGTTTTGGGTTAGATACAGAGCCATCGATCTCCACCGTGGCGGTTTCCTTTTACCCTGTATTTGGCGAATTTCTCCGCCGACAAACGAGTATTTCCCTCGTCGTGGCTGACTCTGTAACCCCACGAGATGAATTGCTCACGCATTTGAACCAAGAACCCCACAATTTCGCTTTCGACGATGGCCCCCTTTTCCTCTGCCTTTCGTTCTTAATAGCGTCGTTAAGTGAAGGATCGATATTCTTGTCGTCTGAGAACGGCGTTAGAGATAGAATGCGTTTGGTTTTGGCAAAGTCATCGAACAAAGGTTGTGGTACTAATGAATTCAGTTCTACCACTGCCATGGCCAAGAGGTTAAAAAGAAGGAAGGCGTTGGCTGATCTGAGAGTGGAGGAGTCCTTACTTTTGAAGGAAAGGGTACATCTCAAAAAGGAGCTGGAAAGTTTACATGCGACGTTCAAGGAACAGACGACTAACAATGAGAAGTTGAAGAAAATGAAGCTCAATCTGAATTTCAATGCATCATCAGACCGTCTTCGGGATGAGTCGAAGCCAGTAGCTCCCCGTCAACAGTGCCAAAGCGTGGATCCTACAACTGACAACGTTCCTGCAACTTCACCAATACAAACCTTACCTGGAACCAGTACACAATCAGAATTGCACGAGACACAGGAGATAAATTCAATGGAAAATGGTGATGTTTCATTGGCTCAGAATTCAGAAAACTGCTCGTTGTTTTATCATTTGGCACAGGTTTTGAGTCAAAGATGA ATGACAGACCTCACCCATCTCTCCCCTTCCTTTTCAATTTCCTACCCGCCGCTCAATATGGTGTTGAAGGACGAGTGGTTGTGTGCCGCCATGGCCGATGACAGCGTCGTCGTTGAGTTACTGGTTCGTCTCAAGCAATCCCAAGCCTCTTCTTCGATCAAATCTCCGCTACCTGCCGTTATTCCGCCCAGATGGGGTCTCAGGCAACGCCGTTCCAGGATTCTTTCTCCTTTCCGATTTGATGCCATTGCTCACAAGAATAAGGACTCCACCTCTACCAGATGTAGCCCCACCACTCCTCTCTCTTGGAGTGGCGATACATCACCTTCCGCCACCGCCGATGGATTCGAAGAGTCCAGCCATCCATCCGAATTTTCCCACTCCTCCAGATCCAAGGTTCTTTCTCGATTCTACTATTGTTTCTTTTCCCCCCAATCTTCATTTCCTGTTATTTTTTTCTCTCTCTCTGGTTTTGGGTTAGATACAGAGCCATCGATCTCCACCGTGGCGGTTTCCTTTTACCCTGTATTTGGCGAATTTCTCCGCCGACAAACGAGTATTTCCCTCGTCGTGGCTGACTCTGTAACCCCACGAGATGAATTGCTCACGCATTTGAACCAAGAACCCCACAATTTCGCTTTCGACGATGGCCCCCTTTTCCTCTGCCTTTCGTTCTTAATAGCGTCGTTAAGTGAAGGATCGATATTCTTGTCGTCTGAGAACGGCGTTAGAGATAGAATGCGTTTGGTTTTGGCAAAGTCATCGAACAAAGGTTGTGGTACTAATGAATTCAGTTCTACCACTGCCATGGCCAAGAGGTTAAAAAGAAGGAAGGCGTTGGCTGATCTGAGAGTGGAGGAGTCCTTACTTTTGAAGGAAAGGGTACATCTCAAAAAGGAGCTGGAAAGTTTACATGCGACGTTCAAGGAACAGACGACTAACAATGAGAAGTTGAAGAAAATGAAGCTCAATCTGAATTTCAATGCATCATCAGACCGTCTTCGGGATGAGTCGAAGCCAGTAGCTCCCCGTCAACAGTGCCAAAGCGTGGATCCTACAACTGACAACGTTCCTGCAACTTCACCAATACAAACCTTACCTGGAACCAGTACACAATCAGAATTGCACGAGACACAGGAGATAAATTCAATGGAAAATGGTGATGTTTCATTGGCTCAGAATTCAGAAAACTGCTCGTTGTTTTATCATTTGGCACAGGTTTTGAGTCAAAGATGA MTDLTHLSPSFSISYPPLNMVLKDEWLCAAMADDSVVVELLVRLKQSQASSSIKSPLPAVIPPRWGLRQRRSRILSPFRFDAIAHKNKDSTSTRCSPTTPLSWSGDTSPSATADGFEESSHPSEFSHSSRSKVLSRFYYCFFSPQSSFPVIFFSLSGFGLDTEPSISTVAVSFYPVFGEFLRRQTSISLVVADSVTPRDELLTHLNQEPHNFAFDDGPLFLCLSFLIASLSEGSIFLSSENGVRDRMRLVLAKSSNKGCGTNEFSSTTAMAKRLKRRKALADLRVEESLLLKERVHLKKELESLHATFKEQTTNNEKLKKMKLNLNFNASSDRLRDESKPVAPRQQCQSVDPTTDNVPATSPIQTLPGTSTQSELHETQEINSMENGDVSLAQNSENCSLFYHLAQVLSQR Homology
BLAST of Clc08G14070 vs. NCBI nr
Match: XP_038886620.1 (uncharacterized protein LOC120076783 isoform X1 [Benincasa hispida]) HSP 1 Score: 390.6 bits (1002), Expect = 1.7e-104 Identity = 232/368 (63.04%), Postives = 237/368 (64.40%), Query Frame = 0
BLAST of Clc08G14070 vs. NCBI nr
Match: KAG7029492.1 (hypothetical protein SDJN02_07831 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 343.6 bits (880), Expect = 2.4e-90 Identity = 219/370 (59.19%), Postives = 242/370 (65.41%), Query Frame = 0
BLAST of Clc08G14070 vs. NCBI nr
Match: XP_004138712.1 (uncharacterized protein LOC101213579 [Cucumis sativus] >KGN62977.1 hypothetical protein Csa_022542 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 3.1e-90 Identity = 212/368 (57.61%), Postives = 223/368 (60.60%), Query Frame = 0
BLAST of Clc08G14070 vs. NCBI nr
Match: XP_022962277.1 (uncharacterized protein LOC111462771 [Cucurbita moschata]) HSP 1 Score: 323.6 bits (828), Expect = 2.5e-84 Identity = 206/370 (55.68%), Postives = 222/370 (60.00%), Query Frame = 0
BLAST of Clc08G14070 vs. NCBI nr
Match: XP_023547221.1 (uncharacterized protein LOC111806097 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 320.1 bits (819), Expect = 2.8e-83 Identity = 205/370 (55.41%), Postives = 221/370 (59.73%), Query Frame = 0
BLAST of Clc08G14070 vs. ExPASy TrEMBL
Match: A0A0A0LQC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382500 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90 Identity = 212/368 (57.61%), Postives = 223/368 (60.60%), Query Frame = 0
BLAST of Clc08G14070 vs. ExPASy TrEMBL
Match: A0A6J1HCA4 (uncharacterized protein LOC111462771 OS=Cucurbita moschata OX=3662 GN=LOC111462771 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84 Identity = 206/370 (55.68%), Postives = 222/370 (60.00%), Query Frame = 0
BLAST of Clc08G14070 vs. ExPASy TrEMBL
Match: A0A6J1BQL2 (uncharacterized protein LOC111004554 OS=Momordica charantia OX=3673 GN=LOC111004554 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 8.3e-81 Identity = 199/368 (54.08%), Postives = 212/368 (57.61%), Query Frame = 0
BLAST of Clc08G14070 vs. ExPASy TrEMBL
Match: A0A6J1KBK0 (uncharacterized protein LOC111491811 OS=Cucurbita maxima OX=3661 GN=LOC111491811 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 7.0e-80 Identity = 201/370 (54.32%), Postives = 216/370 (58.38%), Query Frame = 0
BLAST of Clc08G14070 vs. ExPASy TrEMBL
Match: A0A6J1KJM6 (uncharacterized protein LOC111496307 OS=Cucurbita maxima OX=3661 GN=LOC111496307 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.6e-71 Identity = 182/369 (49.32%), Postives = 204/369 (55.28%), Query Frame = 0
BLAST of Clc08G14070 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 2.4e-16 Identity = 96/315 (30.48%), Postives = 125/315 (39.68%), Query Frame = 0
BLAST of Clc08G14070 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-14 Identity = 55/120 (45.83%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of Clc08G14070 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 4.0e-11 Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of Clc08G14070 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 1.7e-09 Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 0
HSP 2 Score: 46.2 bits (108), Expect = 7.3e-05 Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Clc08G14070 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 4.9e-09 Identity = 47/123 (38.21%), Postives = 61/123 (49.59%), Query Frame = 0
HSP 2 Score: 43.1 bits (100), Expect = 6.2e-04 Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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