Clc08G12830 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGAGAACAACGATTCCAGATTTCGCTAAAAACCGGAACTTTTGGTGGCGGCGAATGCCCATTACTCCGGCAGGCTTCAGCGTTTAGCAACATCTTTTCGGTAATATCTTCGGGTAGTGGCTCTGTTCTTCATTCTAAGTTTTTAATCTCTTTTTTGCGGCTTTGGGACTCTGTTCTCTTGCCGTTAATGGTAGCTAGTAGAGAGGAGAGGATCATGATCCTTGGGCTAAGCTCGTTAATCTCTGTTATGTTTGTTTCTTCTTCGTCAATTAGGAATGTCTTTTTATGTTTTCTGATTCGAGTGTTATTTTTTTCAATTTATTCCCGATTTTGTGTGTTTGAGAAATTCTTTGCTTATTGATAATGCAGACTAGGTGTTTGATATAATGCTGCTTTGAATTGTTTTGCATTCTGTTTCGTATAATAGTTTCTCTTTGGCTTTCTTTTCAAGTTCCAACTCTTAACATACTTGCCATCAAGCTTTTAACCTCTTGAGAATTGAGATAAGTTTAGGTGTTGGATTTTCTTGTGGGGTTTTCCAAATCCTTGCCCTTTGATCTTTATTTCTCTACAAGATGCAAGAGCCTTGCAATTGGATAATCTTTTCCGGCTATTGATTTTTTTATGGGAAAGTCAATGTTTCGAATCGGTTTCATTGCAATGCCCTGTCTTATTTATGTGAGACTAGATGATTCTCTTTTGCAAAGTGCCAAAATACTAGAACCTAGGAATTTATAGCTGTTGAGAGCTTTCTTGTGTTATTTATCTGCAATCTAATGAACTTTACATTTTTTGAACTATTGTTGTATAAAATTGATTTTCAGTGGTTTATATTTTGGTCTTATGGCATCTTAACCTGAAAAGGCTTACAAAATAAAGGTTCTTATGCCTCGACAAATGGTTTTCTTGCAAATGGTCAGAGACCAGAACTCAACAGAAAGAGTTTTGATTGTAATGCCTAACGTTGGAGTGAGCCACCTCCTAATGAAATACTTTGACCAATATTCTGTTTATGATATTTATATGCCTTTGGTTTGATCTGATGAAGGCCCACCCAAATCTTCTTTGTTATTTTTTGAATTCCATTGAATGGTTATATTTATGTTAATGAAAGTTGCATCTTTTTTACTTGTACTCATGCATCAGTAGGGTGTTACCAGGAATCTTTTCCTTTGTTAGATTAATTTTTTTTTATTTTAATTTTAATTGGGATATTTGTATCACTAGAATTTTTTCTTGTACTCATGCATCACTAGAATTGGGATATTTGTATCTTAAACTCAAAAATGGGGCTTAATTCTTTCTTGAATTTGTACCTGTAGGGCCAAACTATTACTCGTGCGATCAAATAATTTCAATTACTGCACTATTTAGGTTTCTTTGTATGATCGCGCTTGCTGAGATTATCATTTCAAATTTTCAGATCCAAACTTTTTTCCCATCGTAAGTCCCTCTTCGTAGATCAGATTTCCCTATTAACATGTCTTTCCTGCGTCCTTGTAGCATTAAACATGTTGGAAAATGATGCTAATCCAACTATCAGCAAGTCAACTGGCCTGCCTCGAAAGCGGTTCTACCGTGCAAGAGCACACAGCAACCCTCTAAGTGACTCTCATTTCCCAGTACCAATCTCCCCCAGTGAAGTTGATTATTCCCTTCATTACCCTCAATTATTCCCTTCAAATGATCAGCGAGATAGATCTAAAAAGATTGAATTTGCTGATATTGGTTGTGGTTTTGGAGGTCTTCTGATTAGTCTTTCAACCCTTTTCCCGGAAACCCTGATGATCGGAATGGAACTTCGGGATAAAGTAACAGAGTATGTTAAGGAAAGGATCTTGGCTTTGAGAGTAGCACATCCTGGCCAGTACCAAAACATTTCAGTAGATCGAACAAATTCCATGAAGTACATTCCAAACTACTTTGAAAAAGCACAACTTTCGAAAATGTTTTTCTTGTTCCCGGACCCTCATTTCAAGGAGAAGAATCATCGCCGCCGTGTGATCAGTCCACATTTGCTTGACGAGTACGCATATGCTTTGAGAGTTGGTGGGATTATATACACAATCACAGATGTGGAAGAGCTTGGAGAGTGGATGAAGACTTGTCTAGAGAATCACCCATTGTTCGAAGCTCTAACATCGGAAGAGCTCGAGGCCGATCCAGCCGTGAAGCTTTTGAGTTCTGCAACTGAGGAAGGACAAAAGGTTGCAAGGAATGAGGGACAGACCTTTCAGGCAGTTTATAGACGCATTAGTGCAGCACCATGACTGGAAGGATTGAGCCTTCTGGGTTCATTTGATTGTAGTAATGAGTCGTTTTCCTTGAGCTTTTGCATACATCCTATTCCTAGTCTTTCTTTTTATTCTAATTCTATTTTCTGTTTTTGTAAGACATACATCTTAGAAAAACATCTTATAAATTTGATCTAATTTACTTCAAAACCTCCTACTCTTTCCTTGTATTCTATTTTCTGTTTTTACAAGCGTTACATCTTAGAAAAACATCTTAGA CTGAGAACAACGATTCCAGATTTCGCTAAAAACCGGAACTTTTGGTGGCGGCGAATGCCCATTACTCCGGCAGGCTTCAGCGTTTAGCAACATCTTTTCGCATTAAACATGTTGGAAAATGATGCTAATCCAACTATCAGCAAGTCAACTGGCCTGCCTCGAAAGCGGTTCTACCGTGCAAGAGCACACAGCAACCCTCTAAGTGACTCTCATTTCCCAGTACCAATCTCCCCCAGTGAAGTTGATTATTCCCTTCATTACCCTCAATTATTCCCTTCAAATGATCAGCGAGATAGATCTAAAAAGATTGAATTTGCTGATATTGGTTGTGGTTTTGGAGGTCTTCTGATTAGTCTTTCAACCCTTTTCCCGGAAACCCTGATGATCGGAATGGAACTTCGGGATAAAGTAACAGAGTATGTTAAGGAAAGGATCTTGGCTTTGAGAGTAGCACATCCTGGCCAGTACCAAAACATTTCAGTAGATCGAACAAATTCCATGAAGTACATTCCAAACTACTTTGAAAAAGCACAACTTTCGAAAATGTTTTTCTTGTTCCCGGACCCTCATTTCAAGGAGAAGAATCATCGCCGCCGTGTGATCAGTCCACATTTGCTTGACGAGTACGCATATGCTTTGAGAGTTGGTGGGATTATATACACAATCACAGATGTGGAAGAGCTTGGAGAGTGGATGAAGACTTGTCTAGAGAATCACCCATTGTTCGAAGCTCTAACATCGGAAGAGCTCGAGGCCGATCCAGCCGTGAAGCTTTTGAGTTCTGCAACTGAGGAAGGACAAAAGGTTGCAAGGAATGAGGGACAGACCTTTCAGGCAGTTTATAGACGCATTAGTGCAGCACCATGACTGGAAGGATTGAGCCTTCTGGGTTCATTTGATTGTAGTAATGAGTCGTTTTCCTTGAGCTTTTGCATACATCCTATTCCTAGTCTTTCTTTTTATTCTAATTCTATTTTCTGTTTTTGTAAGACATACATCTTAGAAAAACATCTTATAAATTTGATCTAATTTACTTCAAAACCTCCTACTCTTTCCTTGTATTCTATTTTCTGTTTTTACAAGCGTTACATCTTAGAAAAACATCTTAGA ATGTTGGAAAATGATGCTAATCCAACTATCAGCAAGTCAACTGGCCTGCCTCGAAAGCGGTTCTACCGTGCAAGAGCACACAGCAACCCTCTAAGTGACTCTCATTTCCCAGTACCAATCTCCCCCAGTGAAGTTGATTATTCCCTTCATTACCCTCAATTATTCCCTTCAAATGATCAGCGAGATAGATCTAAAAAGATTGAATTTGCTGATATTGGTTGTGGTTTTGGAGGTCTTCTGATTAGTCTTTCAACCCTTTTCCCGGAAACCCTGATGATCGGAATGGAACTTCGGGATAAAGTAACAGAGTATGTTAAGGAAAGGATCTTGGCTTTGAGAGTAGCACATCCTGGCCAGTACCAAAACATTTCAGTAGATCGAACAAATTCCATGAAGTACATTCCAAACTACTTTGAAAAAGCACAACTTTCGAAAATGTTTTTCTTGTTCCCGGACCCTCATTTCAAGGAGAAGAATCATCGCCGCCGTGTGATCAGTCCACATTTGCTTGACGAGTACGCATATGCTTTGAGAGTTGGTGGGATTATATACACAATCACAGATGTGGAAGAGCTTGGAGAGTGGATGAAGACTTGTCTAGAGAATCACCCATTGTTCGAAGCTCTAACATCGGAAGAGCTCGAGGCCGATCCAGCCGTGAAGCTTTTGAGTTCTGCAACTGAGGAAGGACAAAAGGTTGCAAGGAATGAGGGACAGACCTTTCAGGCAGTTTATAGACGCATTAGTGCAGCACCATGA MLENDANPTISKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSEVDYSLHYPQLFPSNDQRDRSKKIEFADIGCGFGGLLISLSTLFPETLMIGMELRDKVTEYVKERILALRVAHPGQYQNISVDRTNSMKYIPNYFEKAQLSKMFFLFPDPHFKEKNHRRRVISPHLLDEYAYALRVGGIIYTITDVEELGEWMKTCLENHPLFEALTSEELEADPAVKLLSSATEEGQKVARNEGQTFQAVYRRISAAP Homology
BLAST of Clc08G12830 vs. NCBI nr
Match: XP_008445050.1 (PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo] >XP_016899935.1 PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo] >XP_016899936.1 PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo] >XP_016899937.1 PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo] >XP_016899938.1 PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo] >KAA0065020.1 tRNA (guanine-N(7)-)-methyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 503.8 bits (1296), Expect = 8.4e-139 Identity = 248/252 (98.41%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Clc08G12830 vs. NCBI nr
Match: XP_038884382.1 (tRNA (guanine-N(7)-)-methyltransferase isoform X2 [Benincasa hispida] >XP_038884383.1 tRNA (guanine-N(7)-)-methyltransferase isoform X2 [Benincasa hispida] >XP_038884384.1 tRNA (guanine-N(7)-)-methyltransferase isoform X2 [Benincasa hispida]) HSP 1 Score: 500.4 bits (1287), Expect = 9.3e-138 Identity = 247/252 (98.02%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of Clc08G12830 vs. NCBI nr
Match: XP_038884381.1 (tRNA (guanine-N(7)-)-methyltransferase isoform X1 [Benincasa hispida]) HSP 1 Score: 500.4 bits (1287), Expect = 9.3e-138 Identity = 247/252 (98.02%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of Clc08G12830 vs. NCBI nr
Match: XP_031736486.1 (tRNA (guanine-N(7)-)-methyltransferase isoform X1 [Cucumis sativus] >XP_031736487.1 tRNA (guanine-N(7)-)-methyltransferase isoform X1 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137 Identity = 245/252 (97.22%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Clc08G12830 vs. NCBI nr
Match: XP_004138787.1 (tRNA (guanine-N(7)-)-methyltransferase isoform X2 [Cucumis sativus] >XP_031736488.1 tRNA (guanine-N(7)-)-methyltransferase isoform X2 [Cucumis sativus] >KGN62840.1 hypothetical protein Csa_022503 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137 Identity = 245/252 (97.22%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy Swiss-Prot
Match: Q8GXB7 (tRNA (guanine-N(7)-)-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=At5g24840 PE=2 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 2.9e-110 Identity = 197/242 (81.40%), Postives = 218/242 (90.08%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy Swiss-Prot
Match: A2YB34 (tRNA (guanine-N(7)-)-methyltransferase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_22311 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.0e-107 Identity = 190/239 (79.50%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy Swiss-Prot
Match: Q67V78 (tRNA (guanine-N(7)-)-methyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0236900 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.0e-107 Identity = 190/239 (79.50%), Postives = 208/239 (87.03%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy Swiss-Prot
Match: B6SHG7 (tRNA (guanine-N(7)-)-methyltransferase OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.4e-104 Identity = 186/239 (77.82%), Postives = 205/239 (85.77%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy Swiss-Prot
Match: Q6NU94 (tRNA (guanine-N(7)-)-methyltransferase OS=Xenopus laevis OX=8355 GN=mettl1 PE=2 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 5.6e-77 Identity = 138/245 (56.33%), Postives = 186/245 (75.92%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy TrEMBL
Match: A0A1S4DVC5 (tRNA (guanine-N(7)-)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103488206 PE=3 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.1e-139 Identity = 248/252 (98.41%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy TrEMBL
Match: A0A5A7VCU7 (tRNA (guanine-N(7)-)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003450 PE=3 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.1e-139 Identity = 248/252 (98.41%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy TrEMBL
Match: A0A0A0LLM3 (tRNA (guanine-N(7)-)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G376290 PE=3 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 7.7e-138 Identity = 245/252 (97.22%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy TrEMBL
Match: A0A6J1BTJ1 (tRNA (guanine-N(7)-)-methyltransferase OS=Momordica charantia OX=3673 GN=LOC111005201 PE=3 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.0e-134 Identity = 240/252 (95.24%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of Clc08G12830 vs. ExPASy TrEMBL
Match: A0A6J1KTN7 (tRNA (guanine-N(7)-)-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111496303 PE=3 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.2e-133 Identity = 238/252 (94.44%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of Clc08G12830 vs. TAIR 10
Match: AT5G24840.1 (tRNA (guanine-N-7) methyltransferase ) HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-111 Identity = 197/242 (81.40%), Postives = 218/242 (90.08%), Query Frame = 0
BLAST of Clc08G12830 vs. TAIR 10
Match: AT5G17660.1 (tRNA (guanine-N-7) methyltransferase ) HSP 1 Score: 52.4 bits (124), Expect = 6.3e-07 Identity = 53/203 (26.11%), Postives = 89/203 (43.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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