Clc08G12750 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G12750
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr08: 23961592 .. 23963793 (+)
RNA-Seq ExpressionClc08G12750
SyntenyClc08G12750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTCGGTGTGTTCTAAGAAAGATGAAAACTACTAACCACGCCCTCTTTTAGCTGCCATACTACGAAATTGTTGTTGGCATTACGAAACCATGGTAATAACATCAATACCAATATCTACGTGTTTACTCCTTCATTCGATGATTTTCATTTTTGTTAAACATTTTAGGTGGAGAGTATCGATCTAGTCATTTTTTTGAAATGAGTAAGACCCTGTTTGGATTAATTTAATAAATAAATATTTTTCAAATTTTCATTTTCATTTAAATATTTTTGATTAGAAATTGTTTAAAATAAAGACATTAATAATTTTTAAAATCCATTTTGAGTGGTTGTCAAACACTTAGGTGTGTTTAGAATGCATTTTCAAGTGTTTAATTTAAAAAATTAATCATTTTGGAGAAAATTAGATTGTTTGATAATCACTCAAAATAGATTTTGAAATGCATTTTAAACCTTATTTATCAAAAGAGTTAAAAAAATGATTTTTTTGAATAACATTTTTTTCCTCAAGTCAATTCAAACCTACCCTTATATTTCTAAAAAGTATTTCAAATATACTTGAAAAATATTTGGGTATACTTTATGTACCAATTAAAAAAAATAAATAAATAAAAAATTATCCTATGACAACTTAGGTGGATAAATATAGCTTGGAATATACCCAAATATTTATCTAACATTTGCGGGGTTTACCAGCATCAATAAAATATTTATTATTTATAAAGTCAAAATCATTGTATAAATTAAACGAGTATAGTATTCCATTAATACTAGAAATTTTCCGGAGATTGAGAACATAATCCGTTCCATGGAGATATTTTCGCTCAAAAATGTTGAAATGGGCGCCAAGGTTGAAGAAAATGAAAGCGCGTTAATTAATTAATTAATTGTTTATTTATTTTAAAAAGAAGTATAAAACGCGTGTCCTGACTCCTGACTTGAAATGAGTTTGCGCTTTGCATTTTCCAAACAGTCTTGAGAACGGAGAATATTCAGAACGCATTGGTGGAAAACTGGAGGATCTGCGATGAACATTTTCACAAATAGTTCATTTCTACTTCTCTCGGATGCAGATTTCTGTAATCTCTGCAGTTCCGATTTCGAACTCCGTTTTCTTTGATCGTAGCGTGATTCGTATGAGTTCATCTTCGCGAATCGCGATGCAGGTAATCAATTATTTCGCCATCTCTTATTCTGATAAAATTCTTCACCTCTGCTCTCGATCGTGAACGAACTTCGCGAATAGGACTATAGGAGTTTAGATTCTTCTTTTTTCTTCTTCTTCTTCTTGCCTGATTCATTTTTGTTTTCTTTTTCCAGTCTCGATTCTTGATTTATTTTCTATTTTCAAATTCGAATCAGTGAAATTGAAAAATTAGAGTGATAATGTAGATTTCTTGTGGCTTATAATTGATGGAAGAAAGTCGATCGCAGTCATGTTCTTATTTTATCAAGCCGCTTGAAACCAGTCCACGATCCTTATCGGACTGATTTATCTGTTCTTCTCTCTGATTCCAAGCGGATTGAGCTAAAGTTTACCACATCTGAAAACAACGAGAAAACGGAAGAAGAATCGAAAGGTATTTTACTGTATATTCAGGTGGATGCTCTCCGTATTCTATCTTCAAATCTTTATTAATTTGATTGATCCGAATATACAAAGAAGACGCAAAATGTCAGCATTTCTACAATCATATTTTGTTATGAATTTGTTATAAAATTGCTCAATGTCGATAGCAATAATATTTAAGACTTAAGACTTGAGAGTATATCAAAGGTAGTCTATGAGATGCGATTTTCTAGAATTAATAACTTGGACACAGGTCTTTTGATATCTCTATCGAAATCATAATTTATAACTCTTTGGTGATATTACATGACTTTTATCACATAATTAATTACGTTGTTTGTATTCGAGCTGATAGATTTTTATTTTAGCTTACTAATGGCGATCGATAGACAGATCTCAATTTTGGTGGCGTTACTTCTTGCAAGAAGGTTTAGTTTAAGCCTGCTAAGCTGAATGATATAGCTATATTTCTATGTTGCAAGTCTTCTTTTCTCTTTTCAATGTATTTTTAGTTTTGTCAAACGTTATTGTGATGCAGCAACAGCCGTTCGCTATTCCAGCTAAAGGAAAACGAACTGAAAGCTACACTCCGGGAAGGCTGTCCGGTGAACAAATGGTGAAGAATTAA

mRNA sequence

ATGTATTCGTATTCCATTAATACTAGAAATTTTCCGGAGATTGAGAACATAATCCGTTCCATGGAGATATTTTCGCTCAAAAATGTTGAAATGGGCGCCAAGATTTCTGTAATCTCTGCAGTTCCGATTTCGAACTCCGTTTTCTTTGATCGTAGCGTGATTCGTATGAGTTCATCTTCGCGAATCGCGATGCAGAAAGTCGATCGCAGTCATGTTCTTATTTTATCAAGCCGCTTGAAACCAGTCCACGATCCTTATCGGACTGATTTATCTGTTCTTCTCTCTGATTCCAAGCGGATTGAGCTAAACTTACTAATGGCGATCGATAGACAGATCTCAATTTTGGTGGCGTTACTTCTTGCAAGAAGGTTTATTTTGTCAAACGTTATTGTGATGCAGCAACAGCCGTTCGCTATTCCAGCTAAAGGAAAACGAACTGAAAGCTACACTCCGGGAAGGCTGTCCGGTGAACAAATGGTGAAGAATTAA

Coding sequence (CDS)

ATGTATTCGTATTCCATTAATACTAGAAATTTTCCGGAGATTGAGAACATAATCCGTTCCATGGAGATATTTTCGCTCAAAAATGTTGAAATGGGCGCCAAGATTTCTGTAATCTCTGCAGTTCCGATTTCGAACTCCGTTTTCTTTGATCGTAGCGTGATTCGTATGAGTTCATCTTCGCGAATCGCGATGCAGAAAGTCGATCGCAGTCATGTTCTTATTTTATCAAGCCGCTTGAAACCAGTCCACGATCCTTATCGGACTGATTTATCTGTTCTTCTCTCTGATTCCAAGCGGATTGAGCTAAACTTACTAATGGCGATCGATAGACAGATCTCAATTTTGGTGGCGTTACTTCTTGCAAGAAGGTTTATTTTGTCAAACGTTATTGTGATGCAGCAACAGCCGTTCGCTATTCCAGCTAAAGGAAAACGAACTGAAAGCTACACTCCGGGAAGGCTGTCCGGTGAACAAATGGTGAAGAATTAA

Protein sequence

MYSYSINTRNFPEIENIIRSMEIFSLKNVEMGAKISVISAVPISNSVFFDRSVIRMSSSSRIAMQKVDRSHVLILSSRLKPVHDPYRTDLSVLLSDSKRIELNLLMAIDRQISILVALLLARRFILSNVIVMQQQPFAIPAKGKRTESYTPGRLSGEQMVKN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G12750.2Clc08G12750.2mRNA