Clc08G11410 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G11410
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr08: 22663881 .. 22665628 (-)
RNA-Seq ExpressionClc08G11410
SyntenyClc08G11410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATACAATGATGGTAGGTTGCAGAAAACACCCTATAGAGCAAGGAGTGGGTCATTATTTTATTGACAAGGACAACAGACTTCCAACTATCTTTACATTGGTATGATGTTGTCCTTTTTGAACATAAATGACTATTTTTGGAACCACCCAAAAGATCTCATACTAATGGAGATAATTGTTTTCACTTATATACTTATGATTATTCATCCCCTAACAATTTTTTGTAGTTTAGACTTTTCAGAAGTTTTATTAATTGGGGAATCTAACTTCAGGCATTCCAAAAGAGTCAGAGGAGATGATTGGGAAATTGTGGCTTCTTTAAAGAAAATTTTGTATGATTCTTGGGTATTATTTGAGGGTTAATATTGTTGAGCTCCATATTTGCTAGTTTAAGACTGCTCCATATCAACAAAAACTAGAGATTGGTTGAAGTGCTAGCTAAATGGACTATTTGGAACATATGATGTTTTCATTACACAATTAGGAAGCATTTGGGCGGGAAGTGGAGTTGTGAAGTCTAAAAAGTTGTTAGTCATGAGCTCATAATATAAAAAATTAAGTGATATTTTCTTATTGTGGTGCCCAAGAACTTTTTGGGCCAAACAAGTAGTACAGTTAACAAGTTCACTCCGCCTAACTCCAACTCTTTGGGCCAAATACCCTTAAAGTTCTATGATTGTTTGAAAGAGTGGCAACTTGGTGTCTCATGTCAGTTGGATTGTTACAGTGAATGTTAGCTCGTAGTTTTAGACATTTGGAAACATTTCTATGGACAATTGGTTGGCAGGAAGTTCGGTAATTGGTTGTTTGTGCAAGGAAAATGTTGGGGACTAAATTTCAAGCTTCAATAGTACTTAAAAAATGAAACAGATGCTAAAGCAGTTGATGGATATGCCCTTGAAATCCGTGAAAAAGTTGCTAAAATCTTGGGGGCACCAGATTCGAGGTTCGGTGTCTTTGATTGTTCGGGCTCTATAATAAACCTCTATAATAAACCTCTATAATAAACCTACATCATGGTTTTCTTTTGGGATGAATTTGCTTGAAATAAAATTCAGCTCAGTTTAGGTTGAGTTATTGATTTATTTATTATTATTACTATTTGACAAATTGTCCAAAATATTTGATCCCAAATAAACTTTGACCTGCTTTTTCAAATTAAGCTTTCTAAACTCTTTGCTAGCATCAGTAAAAAAATTTCTGTATATTTCTTTCATTTCTTTCTCGCCCCTCGTCTCTATTGATCTCGCTCTCTTTTCCTTCTCTCTCCATTCCCCCCTTCCCTATCGCTCACTTTTCTCCTTTTTTTTGGGCCTAAGAGACGATCAGTCGGAGCACTTGACAAATCATGATCACTCAAGACAAAGCCCTGCAAATCAACAACACTATGCCTTGAAATCGCCCAAGAAGAGTCCAACAATGGTTGGACTACCACCGTGGACCTTCCACCAGCCTAATTGCATCATCGGCAATTTGGCGAAGGTTTTCCCAGCTTTTGCTCCCTCTTTCTTTTTGATTCTCGAGACCTACAACGACAAGGATTATGGAGTTAAAAGTACATGCGGGGTACAAAAGCTATTGTTTTGAGGATTGATGTTGGTCCTTTCAAGTGCAACTGAGGGACTAGAAATTTTGTTGAAAAATGTTTCGATGAGAAATTACACATTGTGGATACTGATTTTGTGTAGGACTTGGTGGCAAGTGAAGGAGTTGTTTTGATCGAAAACTTTCTTAGTACTTCGTGA

mRNA sequence

ATGTTATACAATGATGATGCTAAAGCAGTTGATGGATATGCCCTTGAAATCCGTGAAAAAGTTGCTAAAATCTTGGGGGCACCAGATTCGAGAGACGATCAGTCGGAGCACTTGACAAATCATGATCACTCAAGACAAAGCCCTGCAAATCAACAACACTATGCCTTGAAATCGCCCAAGAAGAGTCCAACAATGGTTGGACTACCACCGTGGACCTTCCACCAGCCTAATTGCATCATCGGCAATTTGGCGAAGGTTTTCCCAGCTTTTGCTCCCTCTTTCTTTTTGATTCTCGAGACCTACAACGACAAGGATTATGGAGTTAAAAGTACATGCGGGGACTTGGTGGCAAGTGAAGGAGTTGTTTTGATCGAAAACTTTCTTAGTACTTCGTGA

Coding sequence (CDS)

ATGTTATACAATGATGATGCTAAAGCAGTTGATGGATATGCCCTTGAAATCCGTGAAAAAGTTGCTAAAATCTTGGGGGCACCAGATTCGAGAGACGATCAGTCGGAGCACTTGACAAATCATGATCACTCAAGACAAAGCCCTGCAAATCAACAACACTATGCCTTGAAATCGCCCAAGAAGAGTCCAACAATGGTTGGACTACCACCGTGGACCTTCCACCAGCCTAATTGCATCATCGGCAATTTGGCGAAGGTTTTCCCAGCTTTTGCTCCCTCTTTCTTTTTGATTCTCGAGACCTACAACGACAAGGATTATGGAGTTAAAAGTACATGCGGGGACTTGGTGGCAAGTGAAGGAGTTGTTTTGATCGAAAACTTTCTTAGTACTTCGTGA

Protein sequence

MLYNDDAKAVDGYALEIREKVAKILGAPDSRDDQSEHLTNHDHSRQSPANQQHYALKSPKKSPTMVGLPPWTFHQPNCIIGNLAKVFPAFAPSFFLILETYNDKDYGVKSTCGDLVASEGVVLIENFLSTS
Homology
The following BLAST results are available for this feature:
BLAST of Clc08G11410 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G11410 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G11410 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G11410 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G11410.2Clc08G11410.2mRNA