Clc08G10520 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G10520
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr08: 21828006 .. 21828218 (+)
RNA-Seq ExpressionClc08G10520
SyntenyClc08G10520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTTTGGCCAACACCCAGATCGCCAAACCCAGAACAAGCTCTCAAAACGGACGGGAATATGTAGGAATTGAAGAAAATTTGTTGGGACAACATTTGGTGATACAGAGAAATGGCTTCCTGATAGAAGCCGGTCCAGACATGGGATTTAAGAAGGACACCCCACATGAAGGAATCGGGAGAGTGGAAGGTGCGGAAGACGGACGTTGA

mRNA sequence

ATGAACCTTTTGGCCAACACCCAGATCGCCAAACCCAGAACAAGCTCTCAAAACGGACGGGAATATGTAGGAATTGAAGAAAATTTGTTGGGACAACATTTGGTGATACAGAGAAATGGCTTCCTGATAGAAGCCGGTCCAGACATGGGATTTAAGAAGGACACCCCACATGAAGGAATCGGGAGAGTGGAAGGTGCGGAAGACGGACGTTGA

Coding sequence (CDS)

ATGAACCTTTTGGCCAACACCCAGATCGCCAAACCCAGAACAAGCTCTCAAAACGGACGGGAATATGTAGGAATTGAAGAAAATTTGTTGGGACAACATTTGGTGATACAGAGAAATGGCTTCCTGATAGAAGCCGGTCCAGACATGGGATTTAAGAAGGACACCCCACATGAAGGAATCGGGAGAGTGGAAGGTGCGGAAGACGGACGTTGA

Protein sequence

MNLLANTQIAKPRTSSQNGREYVGIEENLLGQHLVIQRNGFLIEAGPDMGFKKDTPHEGIGRVEGAEDGR
Homology
The following BLAST results are available for this feature:
BLAST of Clc08G10520 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G10520 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G10520 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G10520 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G10520.1Clc08G10520.1mRNA