Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTAAGTGTAAAAGTGCAAAAGGCAAACTCATAACCATCCCCCCTTTGTCCTAAGTCTCCTTCTCCACTTCAACTCCCACTTCTTCTTATTCATAACAAAGCTTCTTTCTTTCTTTCTACAACATAACTTCTTCATCAATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGTGGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGGTGCCCCATGTGCCACCACTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCTTCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCATGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGTTGTTGTCTTCATGGTGAAATTGAAGCGAAGCTCTGTACATTCATTTTCATGGAGTTTTTGCCTCAAAAAACTCTAAATGGGGTCTCTTTTTTATACGGTTTGTTTTGGTGGCAAGTAGAATTTTAGGAATTATTCTTTTCTAAAGTTTGGATTTTTATGTTAATTGAAAATTATGATTTTCATGTGCCTACGACAAACATTTTTCTCTTTTCATTGTTAAATTAAATCAATGGGTTATGTAAATTTCTACTTTTAGATATTTGTTTCAAAAATTGGTTTTGCT
mRNA sequence
TATTAAGTGTAAAAGTGCAAAAGGCAAACTCATAACCATCCCCCCTTTGTCCTAAGTCTCCTTCTCCACTTCAACTCCCACTTCTTCTTATTCATAACAAAGCTTCTTTCTTTCTTTCTACAACATAACTTCTTCATCAATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGTGGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGGTGCCCCATGTGCCACCACTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCTTCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCATGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGTTGTTGTCTTCATGGTGAAATTGAAGCGAAGCTCTGTACATTCATTTTCATGGAGTTTTTGCCTCAAAAAACTCTAAATGGGGTCTCTTTTTTATACGGTTTGTTTTGGTGGCAAGTAGAATTTTAGGAATTATTCTTTTCTAAAGTTTGGATTTTTATGTTAATTGAAAATTATGATTTTCATGTGCCTACGACAAACATTTTTCTCTTTTCATTGTTAAATTAAATCAATGGGTTATGTAAATTTCTACTTTTAGATATTTGTTTCAAAAATTGGTTTTGCT
Coding sequence (CDS)
ATGGAACATTTCTCCAAAACCCTTCATTTCTCTTCCCTTTTCATTCTTCTCATCTTCCACCTCACCGGAGCTACGGCAGCTGCGGCCGAAGATGGCCGTGTGGTCGAGGTGGTTCCTCCGGTTAGCCTTCTTTGTATTAGCGAATGTTCAACTTGCCCCACCATATGTGCGCCGCCGCCGCCGCCGCCGCCCATGGTGGTGCCCAAGTCACCGCCACCGGTGCCCCATGTGCCACCACTGGCTTACTTCCCACTCAATTCACCCCCACCTCGACAAACCCCATCTCCACCGCCGCCGTCGCCGTCGCCACCACCGCCGGCGGCGGTGGCTTCATCTCATTCCCCGCCGCCTCCCGCATTCAAATATTATTTCAATTTGCCACCACCGCCGCCGGTGCTGATTCCAGTACCTGTGCCGCCGACCGGCACGGCGGCGCCTCATGGAAATACGAATACTAATGCTTATAATTACTACTTTTACGCTCCGACATCGTCTTCTCCGTCTCTTCCGGCGGCGTTTTTCTGGGGTCTGTTTCTCTTCCAGTTGATGTTGTTGTCTTCATGGTGA
Protein sequence
MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLFLFQLMLLSSW
Homology
BLAST of Clc08G10220 vs. NCBI nr
Match:
XP_011657382.1 (extensin [Cucumis sativus] >KGN47605.1 hypothetical protein Csa_018938 [Cucumis sativus])
HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 157/191 (82.20%), Postives = 162/191 (84.82%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHFSKTLHFSS+ ILLI L A EDGRVVEVVPPVSLLCISECSTCPTICAPPP
Sbjct: 1 MEHFSKTLHFSSILILLILRL---ARAVPEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA---SSHSPPP 120
PPPP +V KSPPPVPHVPPLAYFPLNSPPPR T SPPPP PSPPPP A A SSHSPPP
Sbjct: 61 PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPP 120
Query: 121 PAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFW 180
PAF+YYFNLPPPPPVLIPVPVPP+ TA PHGNTN+NAYNYYFYAP SSS PSLP A FW
Sbjct: 121 PAFRYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFW 180
Query: 181 GLFLFQLMLLS 187
GLFLF LML S
Sbjct: 181 GLFLFHLMLCS 188
BLAST of Clc08G10220 vs. NCBI nr
Match:
KAA0064726.1 (classical arabinogalactan protein 9-like [Cucumis melo var. makuwa])
HSP 1 Score: 274.6 bits (701), Expect = 6.2e-70
Identity = 158/191 (82.72%), Postives = 164/191 (85.86%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHFSKTLHFSS+ ILLI L G AA EDGRVV+VVPPVSLLCISECSTCPTICAPPP
Sbjct: 1 MEHFSKTLHFSSILILLILPLAG---AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA---SSHSPPP 120
PPP V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPSPSPPPP A A SSHSPPP
Sbjct: 61 PPP--TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPP 120
Query: 121 PAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFW 180
PAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS PSLP AFFW
Sbjct: 121 PAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFW 180
Query: 181 GLFLFQLMLLS 187
GLFLF L+L S
Sbjct: 181 GLFLFHLILCS 186
BLAST of Clc08G10220 vs. NCBI nr
Match:
XP_008445508.1 (PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo])
HSP 1 Score: 257.7 bits (657), Expect = 7.9e-65
Identity = 149/179 (83.24%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHFSKTLHFSS+ ILLI L G AA EDGRVV+VVPPVSLLCISECSTCPTICAPPP
Sbjct: 1 MEHFSKTLHFSSILILLILPLAG---AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA---SSHSPPP 120
PPP V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPSPSPPPP A A SSHSPPP
Sbjct: 61 PPP--TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPP 120
Query: 121 PAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFF 175
PAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS PSLP AFF
Sbjct: 121 PAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 174
BLAST of Clc08G10220 vs. NCBI nr
Match:
XP_022132157.1 (leucine-rich repeat extensin-like protein 3 [Momordica charantia])
HSP 1 Score: 214.9 bits (546), Expect = 5.8e-52
Identity = 135/192 (70.31%), Postives = 144/192 (75.00%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHF + HFS L ILLI L GA AAA+ED R+VEVVPPVSLLCISECSTCP IC+PPP
Sbjct: 1 MEHFRRIFHFSCLSILLIIDLAGA-AAASEDHRLVEVVPPVSLLCISECSTCPVICSPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSP----PPRQTPSPPPPSPSPPPPAAVASSHSPP 120
PP + KSPP PH PPLAY PLN+P PPR TPSP PP P PP P A SH PP
Sbjct: 61 PPTAAL--KSPP--PHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPP 120
Query: 121 PPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWG 180
PPAF YYFNLPPPPPVLIPVPVPP TAAPHGNTN+NAYNYYFYA SSS SLPA +
Sbjct: 121 PPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCA 180
Query: 181 LFLFQLMLLSSW 189
LF+FQ M S W
Sbjct: 181 LFVFQFM-FSCW 185
BLAST of Clc08G10220 vs. NCBI nr
Match:
XP_022951103.1 (extensin-3-like [Cucurbita moschata])
HSP 1 Score: 196.1 bits (497), Expect = 2.8e-46
Identity = 129/185 (69.73%), Postives = 139/185 (75.14%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEH + T F FILLI HL GA A A+++ R+VEVVPPVSLLCISECSTCP ICA P
Sbjct: 1 MEHSTTTTLF---FILLIVHLAGA-AMASDNHRLVEVVPPVSLLCISECSTCPVICA--P 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPP--AAVASSHSPPPP 120
PPPP V KSPPPVPH PP+A FPLN P PSPP PSPSPPPP ASSHSPPPP
Sbjct: 61 PPPPTVTLKSPPPVPHSPPMASFPLNPP-----PSPPRPSPSPPPPPVPVAASSHSPPPP 120
Query: 121 AFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLF 180
AFKYYF+LPPPPPVLIP P+PPT TAAPHG NTNAYNYYFYA S S + P F W LF
Sbjct: 121 AFKYYFSLPPPPPVLIPEPLPPT-TAAPHG--NTNAYNYYFYASNSCSLNSP-VFLWALF 170
Query: 181 LFQLM 184
LF L+
Sbjct: 181 LFHLV 170
BLAST of Clc08G10220 vs. ExPASy Swiss-Prot
Match:
Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)
HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04
Identity = 50/122 (40.98%), Postives = 58/122 (47.54%), Query Frame = 0
Query: 58 PPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTP----SPPPPSPSPPPPAAVASSH 117
PPPPPPP V PPP P PP Y P PPP P SPPPPSP PPPP +
Sbjct: 440 PPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPP 499
Query: 118 SPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAF 176
PPPP ++ PPPPPV P PP+ P T + P SP P +
Sbjct: 500 PPPPPPPPPVYS-PPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPY 559
BLAST of Clc08G10220 vs. ExPASy TrEMBL
Match:
A0A0A0KD44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 6.1e-71
Identity = 157/191 (82.20%), Postives = 162/191 (84.82%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHFSKTLHFSS+ ILLI L A EDGRVVEVVPPVSLLCISECSTCPTICAPPP
Sbjct: 1 MEHFSKTLHFSSILILLILRL---ARAVPEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA---SSHSPPP 120
PPPP +V KSPPPVPHVPPLAYFPLNSPPPR T SPPPP PSPPPP A A SSHSPPP
Sbjct: 61 PPPPPIVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPWPSPPPPPATATAVSSHSPPP 120
Query: 121 PAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFW 180
PAF+YYFNLPPPPPVLIPVPVPP+ TA PHGNTN+NAYNYYFYAP SSS PSLP A FW
Sbjct: 121 PAFRYYFNLPPPPPVLIPVPVPPSATAGPHGNTNSNAYNYYFYAPASSSAPPSLPTALFW 180
Query: 181 GLFLFQLMLLS 187
GLFLF LML S
Sbjct: 181 GLFLFHLMLCS 188
BLAST of Clc08G10220 vs. ExPASy TrEMBL
Match:
A0A5A7VEH7 (Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00300 PE=4 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 158/191 (82.72%), Postives = 164/191 (85.86%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHFSKTLHFSS+ ILLI L G AA EDGRVV+VVPPVSLLCISECSTCPTICAPPP
Sbjct: 1 MEHFSKTLHFSSILILLILPLAG---AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA---SSHSPPP 120
PPP V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPSPSPPPP A A SSHSPPP
Sbjct: 61 PPP--TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPP 120
Query: 121 PAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFFW 180
PAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS PSLP AFFW
Sbjct: 121 PAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFFW 180
Query: 181 GLFLFQLMLLS 187
GLFLF L+L S
Sbjct: 181 GLFLFHLILCS 186
BLAST of Clc08G10220 vs. ExPASy TrEMBL
Match:
A0A1S3BCX5 (classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504 PE=4 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 3.8e-65
Identity = 149/179 (83.24%), Postives = 154/179 (86.03%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHFSKTLHFSS+ ILLI L G AA EDGRVV+VVPPVSLLCISECSTCPTICAPPP
Sbjct: 1 MEHFSKTLHFSSILILLILPLAG---AAPEDGRVVQVVPPVSLLCISECSTCPTICAPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVA---SSHSPPP 120
PPP V KSPPPVPHVPPLAYFPLNSPPPR T SPPPPSPSPPPP A A SSHSPPP
Sbjct: 61 PPP--TVLKSPPPVPHVPPLAYFPLNSPPPRPTSSPPPPSPSPPPPPATATAVSSHSPPP 120
Query: 121 PAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSS--PSLPAAFF 175
PAF+YYFNLPPPPPVLIPVPVPP+ TAAP GNTN+NAYNYYFYAP SSS PSLP AFF
Sbjct: 121 PAFRYYFNLPPPPPVLIPVPVPPSATAAPRGNTNSNAYNYYFYAPASSSAPPSLPTAFF 174
BLAST of Clc08G10220 vs. ExPASy TrEMBL
Match:
A0A6J1BT26 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111005088 PE=4 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 2.8e-52
Identity = 135/192 (70.31%), Postives = 144/192 (75.00%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEHF + HFS L ILLI L GA AAA+ED R+VEVVPPVSLLCISECSTCP IC+PPP
Sbjct: 1 MEHFRRIFHFSCLSILLIIDLAGA-AAASEDHRLVEVVPPVSLLCISECSTCPVICSPPP 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSP----PPRQTPSPPPPSPSPPPPAAVASSHSPP 120
PP + KSPP PH PPLAY PLN+P PPR TPSP PP P PP P A SH PP
Sbjct: 61 PPTAAL--KSPP--PHSPPLAYVPLNAPPSPSPPRPTPSPSPPPPPPPSPPLAALSHPPP 120
Query: 121 PPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWG 180
PPAF YYFNLPPPPPVLIPVPVPP TAAPHGNTN+NAYNYYFYA SSS SLPA +
Sbjct: 121 PPAFNYYFNLPPPPPVLIPVPVPPK-TAAPHGNTNSNAYNYYFYASKSSSLSLPATWLCA 180
Query: 181 LFLFQLMLLSSW 189
LF+FQ M S W
Sbjct: 181 LFVFQFM-FSCW 185
BLAST of Clc08G10220 vs. ExPASy TrEMBL
Match:
A0A6J1GGS2 (extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 129/185 (69.73%), Postives = 139/185 (75.14%), Query Frame = 0
Query: 1 MEHFSKTLHFSSLFILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP 60
MEH + T F FILLI HL GA A A+++ R+VEVVPPVSLLCISECSTCP ICA P
Sbjct: 1 MEHSTTTTLF---FILLIVHLAGA-AMASDNHRLVEVVPPVSLLCISECSTCPVICA--P 60
Query: 61 PPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPP--AAVASSHSPPPP 120
PPPP V KSPPPVPH PP+A FPLN P PSPP PSPSPPPP ASSHSPPPP
Sbjct: 61 PPPPTVTLKSPPPVPHSPPMASFPLNPP-----PSPPRPSPSPPPPPVPVAASSHSPPPP 120
Query: 121 AFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAFFWGLF 180
AFKYYF+LPPPPPVLIP P+PPT TAAPHG NTNAYNYYFYA S S + P F W LF
Sbjct: 121 AFKYYFSLPPPPPVLIPEPLPPT-TAAPHG--NTNAYNYYFYASNSCSLNSP-VFLWALF 170
Query: 181 LFQLM 184
LF L+
Sbjct: 181 LFHLV 170
BLAST of Clc08G10220 vs. TAIR 10
Match:
AT5G11990.1 (proline-rich family protein )
HSP 1 Score: 51.6 bits (122), Expect = 8.0e-07
Identity = 74/183 (40.44%), Postives = 91/183 (49.73%), Query Frame = 0
Query: 15 ILLIFHLTGATAAAAEDGRVVEVVPPVSLLCISECSTCPTICAPPP--PPPPMVVPKSPP 74
I++I L A+ V+ P LCISECSTCPTIC+PPP P P M SPP
Sbjct: 4 IVIIIALVMVMVVASSPSDQTNVLTP---LCISECSTCPTICSPPPSKPSPSM----SPP 63
Query: 75 PVPHVPPLAYFPLNSPPPRQTPSPPPPSPSPPPPAAVASSHSPPPPAFKYYFNLPPPPPV 134
P P +P + P PPP SPPP S S PP + H PPPP F YYF PPPP
Sbjct: 64 PSPSLPLSSSPP---PPPPHKHSPPPLSQSLSPPPLITVIH-PPPPRF-YYFESTPPPPP 123
Query: 135 LIP-----VPVPPTGTAAPHGNTNTN---AYNY-YFYAPTSSSPSLPAAFFWGLFLFQLM 187
L P P P+ +P G + Y + YFY T+S+ +L F FL L+
Sbjct: 124 LSPDGKGSPPSVPSSPPSPKGQSQGQQQPPYPFPYFYFYTASNATL---LFSSSFLIALV 171
BLAST of Clc08G10220 vs. TAIR 10
Match:
AT4G13340.1 (Leucine-rich repeat (LRR) family protein )
HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 50/122 (40.98%), Postives = 58/122 (47.54%), Query Frame = 0
Query: 58 PPPPPPPMVVPKSPPPVPHVPPLAYFPLNSPPPRQTP----SPPPPSPSPPPPAAVASSH 117
PPPPPPP V PPP P PP Y P PPP P SPPPPSP PPPP +
Sbjct: 440 PPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPP 499
Query: 118 SPPPPAFKYYFNLPPPPPVLIPVPVPPTGTAAPHGNTNTNAYNYYFYAPTSSSPSLPAAF 176
PPPP ++ PPPPPV P PP+ P T + P SP P +
Sbjct: 500 PPPPPPPPPVYS-PPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPY 559
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_011657382.1 | 1.3e-70 | 82.20 | extensin [Cucumis sativus] >KGN47605.1 hypothetical protein Csa_018938 [Cucumis ... | [more] |
KAA0064726.1 | 6.2e-70 | 82.72 | classical arabinogalactan protein 9-like [Cucumis melo var. makuwa] | [more] |
XP_008445508.1 | 7.9e-65 | 83.24 | PREDICTED: classical arabinogalactan protein 9-like [Cucumis melo] | [more] |
XP_022132157.1 | 5.8e-52 | 70.31 | leucine-rich repeat extensin-like protein 3 [Momordica charantia] | [more] |
XP_022951103.1 | 2.8e-46 | 69.73 | extensin-3-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9T0K5 | 2.8e-04 | 40.98 | Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KD44 | 6.1e-71 | 82.20 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363610 PE=4 SV=1 | [more] |
A0A5A7VEH7 | 3.0e-70 | 82.72 | Classical arabinogalactan protein 9-like OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A1S3BCX5 | 3.8e-65 | 83.24 | classical arabinogalactan protein 9-like OS=Cucumis melo OX=3656 GN=LOC103488504... | [more] |
A0A6J1BT26 | 2.8e-52 | 70.31 | leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO... | [more] |
A0A6J1GGS2 | 1.4e-46 | 69.73 | extensin-3-like OS=Cucurbita moschata OX=3662 GN=LOC111454053 PE=4 SV=1 | [more] |