Clc08G07830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G07830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Exocyst complex component Sec6
Location	ClcChr08: 19387349 .. 19393023 (+)
RNA-Seq Expression	Clc08G07830
Synteny	Clc08G07830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTGTCAATTGAGGCATCTATATACAACTTTATAGAAAAAAATGGTTTGACGGTGAAAAGAAGCGTGGGCGGCGGAAGGGCGGAAGCACTGTCCGTCTTGGATCGTTGAAGGGCGGCGGCGGAACCACACTTGCAGCAGCTTCAGATGCCTTATGGAGTTGATGTATTCTATATTATATTGAGGGTAAAATCTATTTCCATTAGCCTCTAAAATGGAGGAGTGATTCAAACGAACTTGGGTTCGAAGAGAAGGAAACTGAAGAAGATGAACCATAGCCAACAAGCGATAAGAGCAGGCATGAGGATGACAAAACGCTCTCCGAGTTTCAAGCATCTATAATGGAGTATACTCCCACTGTAAGATCACCTAACAATGTCACCTAAACAATCAAAAGACTCGAATCTCGTATTGAACTAGTGCCTTTGTTCAGTATTTGAGCTAATTACCCCCAATTCAATAACCCAAACAACTGCTCTCTTCGTATCAAAAAAAGAAAATAAATGAAAATTTCCCTGTTTGTGCAACTTTACCTGAACACTGTAGCGCTACCCTTCAATTGATTAAGCATCCAAACAGTAAATCAAACGAGCAGAGTTTCAAATTTAGTCAGCTTGACAACAACCCACCACGATAAACTCTGTCAAAACCCAAATTATATTTATCAATAAAAACCATACCAAACATATTGAAGCTACAAGTATTAGAACTTCGGAACCCTGTTGCTCAAACAAAGTAATCCCTTGTGCTACAAAACCCAAATTATTATTTAACAATGGAAGAGTTCTTTACAGAGTTTTCAATGGAAAAGTTTGTCCATATTTAATTTAACATCAACTAAGACAAGGGCTAATTGCAACACTTGATAAACTAATGGGTCAATTGATCAAATTAAAAGTTGATGGGTGTAATCGTAACAAACCTCATAGTTTAGGAATGGTTTGTGCAATTTTTTTTTTTTTTAAATAATGTAGCCTTTCGTTAATTACATTGATTATCTCCTCGATTTTCAAGTCTCTTTTGTGTTTCTGATTCTCGTTTAGTGCAAGATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGTACTTGTTTTCGACGAATTTCTATCACATTCTTCAACTCCTTTGATCTTCTGCAAAACATGTCTCAATTTTCTCTTGCTTAATTTTTTGTTCCAAACTTTTGTGCTGGAGCTTTGCAGGTGCAGAGCTAATAATTCTACTTGTTTTTATGCTTTGTTGGTAGGATGACAAATTTTTTATTTAGTTTAGTAAAAAAAAGTACCAGAATGCTGCATCATTACTTGTCTGGACAGTGATCCTAGTCGGTCTAAAAACTTCTCAATTCCTCACCATTTCTTCCTAGGAACATATATAGTCTACAAAAAATTCAGGAGTTGGTGCTTTTAAATAGTTGACAAATGAAATGATGTACATCCTTGATAATCAAGAATAAAAACCACTGCAGCAACTAAAGCCTGAATGCTGGTCAGGCTTTAACTATAACACTTGTCCGTGTTATCAATTTCGGATCTCACTTAATGTTTCTGGTAATTGAGTCTGGATGTTGCACACCACATCACACCACAAGTCAGGTACTCCTCTTAATGTGAACTTCAGAACATAAATTCCCCCATTTTCCTAATTTTTCTGCATAATTGGGGCATTTGATTAAATTTCTGGGTGCAAATGCAACATATGTATTATAGAAGATGGAAGCTCTGTAGTTTATTGTTGCAGTTAACAGCGTCAAAATAGATTTAGTTCAACTTCCCGCATAGTATTAGTCAATGGTACCGCTACTTAAAGTTGTTGATCCGAAAATACGAACCTATTTGAATTGACTAGAAAGAAAAATGTTCTTAAAAAAAGTCATTTTATTTAAACTCTTTTGATAAAAATTGTTTAAAATACACTTTGAGAGTGTTTCAAAAGTTGTTTCGACTGGTTCCCAAACACTTCGATCTTTTCCAAAATGACTTATTTTCAAAATTAAACATTGGAAAAGTTAAACCAAACACACCCTTCAACTGAAGTATAATTGCTTGTATTCTGATGCTGTATAGGCACAATTTCTATGTGTTTCTGTTTGTCTTATCTTTCTGTCAATCATATTGTGTTGGCCTTGTTTGTGGGGTTTACTGAACGCAATAGTTCTTTTTTTGTGATTTTGAATGTTGCTCATACTTCATTTATAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGTACAACTGACAGCTTTTTCCCATAATATTTTAAGAGATATGCTGTCTCACCATTGTGTATTACCATATTTACTGTTTGGACCAAACGTTCTGAGATGCACTTGAAGATAAAGAAGCTTGTGTTGCTGAAAGAGTCTTGCTTTCCCAACATGAATGTAGGTTGAACAAGCACAAGCTGGCTGGCGTCACTTTCTTTATCTGGAAAGACAATAAATCAGCTTCGAGAAAACTTCATTTCAATCGAGAAGTATGAAAATAGATGCATTAGCAGTCAAATAATTTTTTGATTCAAGTATTTTTACAACTCAATTGCTATGTGCATTCAGGTTATGTCGAGAATGCCAAACATTAATAGAGAACCGCAATCAGATAAAGCTCCTTAGCAATGCAAGGAATAGCTTATTGACAACCTTGAAGGTTGGTCACCCTTCTCCGTAATTATAAATGTGATGTAGCTCTTCTATTTTTTGTTAGGATCCAATAATTTGGATTATAAAAGCTAACTATCAACTTTTCTTATAGCGAATTCTTACATATCCGGCATGAAATACTAAATCCAAAATCGATCCTCTCTCCTTAAGCTCAAGACCTTTTTAACTTTATTTATTTATCTATTTGTTTTTTCTCCATGGTGGTTAGCTGCACTTATACGGTTTTGTAGAACTAATGTTTGAGCCTTTGACTAGGATGTTGAGGGCATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGGTGAAGTGGTCTTGTTGTCGTTGTTAGGGTTGAAAAAGTTTTCTCATCATTTAGGACATCTATGCATTTGTCTTAAAAAATTGAACAATGTAGTATCTTCATGTAGCTCTTCATGCATTTATAATTTGGCCCTTATAGTCTTTCCTATTACATGCACACTTGTCACAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGTAATGATTGATTTTCAAGCAGCTGAGAGGAAGAGACTTGAAGAATCTGCTTCTGTTGATCTAGAACCTTTATATGCAATGCTTTGTTTTTTCTTATGTAGGATTTATTATATTTTCAATACTCAAACCGAACCTCATGCTTTTACTACTTGATAAATGTCTACAGGTTAACAACAACTTGCGTTGCTATGATCTTGCTATGGAGCTAAGTAATAGCATAACAGAAGCGCTCCCTCAGAATTATGCTGAACAGGTGATGCAATGGTGATTTCTTCGTGCGTTTTACTTTTCGATATTATCTTGTACCTTGATGGTTCTTTTGGATGCTTTCTGCCATAAATAAATTTTGTTATATATTTTGTGGAAAATCTAGTCTCTTGGTGATTTTTTTAACCTCCCTTTTAATTAATTAATAATCACTACCCTATTTTTGGATTTAATTTGTAATCTCTTTATTTGATGGAATTTTTCATGATTTGGATAATGTTTATTAGCTCGTTTCCATTTCCAGTTTGGATTACAATTGTATTATGAAAAAGTGAGAACCTAGTTAAAGTCTTTGGTTCTCCTGGGTATCTGTCTCCTCTCCTCTCTAAGTATGTTTGCGTGATTTGATCCGAACTTTTGGGAAGCGTATTTGTAATCCCTTAGGCACTTGGGATATCTCAACATCAAACTACGTTGTAAAAGGAGAACTTGCTCCAAGAATCAAATCAAAGTCTTTATTATCAATTAAAAGTTGTCCATACAAGAAGAAAATTTATCTATTTATAAAGAATTGAAAAGCAAACTAATCCTAATCTTAAGTAATCTAAGAAACTAATCCTAATTCTAATAAGCAAAGGAAATTAATCCTAATCTTAATAAACCAAGGAAATTAATCTTAATCCTAATCAAATAAGGATATGACTAAAGTAGCTTAATTTACCCTAATCCTATTATATCATTCTATCCCTCCCAAAAGTAACTCCTCGAGATTTAAAAAGAAAATGAATATAAAAAAATAAAAAACAAGCATCCTTGACATCAAAACTAAGTTGTAAAACGTAAAAAAAAAATTCACATTCCAAGCCCAGTTGAATGCAAATAATAGTGTGCCTTGAGAAGAAAACTGCTGACTTGAACAAAAGAAGCTCTCATATGTCCAAAGTTAAAAATATAAGACAAAGAGCTCGCTTGGTTACAATTTTGTTTTCCTCACATTTTTTTACCATGATTTTTCTTTTTAAAAAGAAACATTTAAATTCTTAGTTAAATTCCAAAAACCAAACAAATGTTTAAAAACTATTTTTTTTGTGTTTAAAACTTGGTTTAAATTCAAAAAACAAAACAAGTTTTTAATAATTACTATTTTTAGTTTTCAAAATTTAGTTTGGATTTTTAAAACTTAAAAAAGTAGACAACAAACCAAAAAAAAAAAAAAAGAAAAGGTGGAAATAGTGTATAAGCATAACTTCCCCCATGTCATGGAATGTTGTCCATGACTGCTCAGGAGCCATTTCGCGAAAGCTGTTCTTATTTTTTTTATTGTGACAAGAAAATCCGTGAAAATAACTAATCTCTCAGCCTTCTAGGTATTATCATTGTTTGTTAAATCCTTCTAGGTATTATCATTCTGTCAAAGAGCCCAAATAAAACCTTAGGAACAAAAACCTTCCGTAACATTTTTCAAATCATTGGGATCACCAGAAAGAAGCCACTTTCTTAATATTCTTCACCCTTTGACCATTTCCCTGAGTAAATGAGAAACCATAAAGCTCGTTTGGTTTGTGTCTAATTGCAAACATGCCCTCTTAGTATCCTAATAGTACTCCTAATGTTTTCCTACTTATATTCCTAACAATTGATTTGTTGTCCGTATTATGTAATTCTAGTATTTCATTGATTCAAATGTTTCTTTACAAAAGAACACCACCAGCAGCAGCAAAAAGATACCCCAATTATTATGTGTTATTCCAGAGACTATAGACATAAATGTTGTCTTTCAACATATTGTATTAAATTGCTTATTAACTTGTCTATGAAATAGATGGCATGAAGAATTAAATCATATTAATTGATGCTAGGAAGTTGTGCATTGTACGGTCAGTGTCATTTTTGAGGATCCTGGAGTGCAGGAGTTACTTGTCCTGCTTTATCAGAAGGGTAACATTCCTTCTCTCTTTGTTGTAATCCTCTGTAAGTTGCGCAGTTTCTGTGTTGTAGTCAGTTTGAAGCATATATTGTTTAAGATCATACACCAAGCCAAGAATGTGAAGGCTGTTAGGAATTTTGTGCCTTCCCCAGACTGGGAATGGTAG

mRNA sequence

CAAAATTGTCAATTGAGGCATCTATATACAACTTTATAGAAAAAAATGGTTTGACGGTGAAAAGAAGCGTGGGCGGCGGAAGGGCGGAAGCACTGTCCGTCTTGGATCGTTGAAGGGCGGCGGCGGAACCACACTTGCAGCAGCTTCAGATGCCTTATGGAGTTGATGTATTCTATATTATATTGAGGGTAAAATCTATTTCCATTAGCCTCTAAAATGGAGGAGTGATTCAAACGAACTTGGGTTCGAAGAGAAGGAAACTGAAGAAGATGAACCATAGCCAACAAGCGATAAGAGCAGGCATGAGGATGACAAAACGCTCTCCGAGTTTCAAGCATCTATAATGGAGTATACTCCCACTTGCAAGATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGATGTTGAGGGCATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGATTTATTATATTTTCAATACTCAAACCGAACCTCATGCTTTTACTACTTGATAAATGTCTACAGGTTAACAACAACTTGCGTTGCTATGATCTTGCTATGGAGCTAAGTAATAGCATAACAGAAGCGCTCCCTCAGAATTATGCTGAACAGGAAGTTGTGCATTGTACGGTCAGTGTCATTTTTGAGGATCCTGGAGTGCAGGAGTTACTTGTCCTGCTTTATCAGAAGGGTAACATTCCTTCTCTCTTTGTTGTAATCCTCTGTAAGTTGCGCAGTTTCTGTGTTGTAGTCAGTTTGAAGCATATATTGTTTAAGATCATACACCAAGCCAAGAATGTGAAGGCTGTTAGGAATTTTGTGCCTTCCCCAGACTGGGAATGGTAG

Coding sequence (CDS)

ATGGAGTATACTCCCACTTGCAAGATGATGGTTGAGGATCTCGGTATCGAAGCAAAGGAAGCAGCTGTACGCGAGGTTGCCAAGCTTCTACCGATTTTGGAGCTTCTGCAGTCAATTATTAGTTCGATCAAGGCTGATTACATTACTCGTCAGCAGGCAAATGATGCACATCTCAGTACAATGGTTGCAGAGCAGGATGTTGAGGGCATGATGCCCATATCTGTTGAAGCAGTTGAGGCGCGTGATTCTTTGAGTGATGATTCAGAGCTTATAAACACTTATGAGAGGCTAACCGCACTTGATGGAAAACGGAGGTCTGCTTTAGCAGCTGCAGCATCTCACAAAGAAAAGGTTGGAAGACTAAGGTATTTGTCCCAAGGATTTATTATATTTTCAATACTCAAACCGAACCTCATGCTTTTACTACTTGATAAATGTCTACAGGTTAACAACAACTTGCGTTGCTATGATCTTGCTATGGAGCTAAGTAATAGCATAACAGAAGCGCTCCCTCAGAATTATGCTGAACAGGAAGTTGTGCATTGTACGGTCAGTGTCATTTTTGAGGATCCTGGAGTGCAGGAGTTACTTGTCCTGCTTTATCAGAAGGGTAACATTCCTTCTCTCTTTGTTGTAATCCTCTGTAAGTTGCGCAGTTTCTGTGTTGTAGTCAGTTTGAAGCATATATTGTTTAAGATCATACACCAAGCCAAGAATGTGAAGGCTGTTAGGAATTTTGTGCCTTCCCCAGACTGGGAATGGTAG

Protein sequence

MEYTPTCKMMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEGMMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLRYLSQGFIIFSILKPNLMLLLLDKCLQVNNNLRCYDLAMELSNSITEALPQNYAEQEVVHCTVSVIFEDPGVQELLVLLYQKGNIPSLFVVILCKLRSFCVVVSLKHILFKIIHQAKNVKAVRNFVPSPDWEW

Homology

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BLAST of Clc08G07830 vs. NCBI nr
Match: OMP01169.1 (hypothetical protein COLO4_12104 [Corchorus olitorius])

HSP 1 Score: 179.1 bits (453), Expect = 4.8e-41
Identity = 151/376 (40.16%), Postives = 165/376 (43.88%), Query Frame = 0


Query: 10  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ---- 69
           MVEDLG+EAKEAAVREVAKLLP+ ELLQS IS+IKADYITRQQANDA LSTMVAEQ    
Sbjct: 1   MVEDLGVEAKEAAVREVAKLLPLPELLQS-ISTIKADYITRQQANDAQLSTMVAEQVEQA 60

Query: 70  --------------------------------------------------------DVEG 129
                                                                   DVEG
Sbjct: 61  QAGLESLALSQTTINQLRENFISIEKYCQECQNLIENHDQIKLLSNARNNLNTTLKDVEG 120

Query: 130 MMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRL-------- 189
           MM ISVEA EARDSLSDD E++NTYERLTALDGKRR ALAA ASHKE+V +L        
Sbjct: 121 MMSISVEAAEARDSLSDDKEIVNTYERLTALDGKRRFALAAVASHKEEVSKLSPQTLVRA 180

Query: 190 -------RYLSQ-----------GFIIFSILKP---------------NLMLLLL----- 204
                    L Q           G  + S+  P               NL    L     
Sbjct: 181 LRVVEMQEILDQQLAEEAAEAEGGGAMASVANPRRPGKKSTTSSASAKNLTQQKLKTQGK 240

[Close]

BLAST of Clc08G07830 vs. NCBI nr
Match: PKU76265.1 (hypothetical protein MA16_Dca015585 [Dendrobium catenatum])

HSP 1 Score: 162.5 bits (410), Expect = 4.6e-36
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 10  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEG 69
           ++EDLGIEAK+AAVREVAKLLP+ ELL SI+ SIKADY +RQQANDA LSTMVAEQDV G
Sbjct: 80  IMEDLGIEAKDAAVREVAKLLPLPELLASIV-SIKADYSSRQQANDAQLSTMVAEQDVGG 139

Query: 70  MMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR 123
           MM ISVEA  ARDSL DD ELI+TYERLTALDGKRR ALAAA SHKE+VGRLR
Sbjct: 140 MMSISVEAAAARDSLHDDRELIHTYERLTALDGKRRFALAAAGSHKEEVGRLR 191

[Close]

BLAST of Clc08G07830 vs. NCBI nr
Match: KZM99469.1 (hypothetical protein DCAR_013169 [Daucus carota subsp. sativus])

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-35
Identity = 98/141 (69.50%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDL IEAKEAAVREVAKLL + ELLQS I+SIKADY+TRQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLAIEAKEAAVREVAKLLTLPELLQS-IASIKADYLTRQQANDAQLSTMVAEQECQ 60

Query: 69  ------------------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALD 123
                                   DVEGMM ISVEA EARDSLSDD ELI+TYERLTALD
Sbjct: 61  TLIENHDQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLSDDKELISTYERLTALD 120

[Close]

BLAST of Clc08G07830 vs. NCBI nr
Match: KZM99469.1 (hypothetical protein DCAR_013169 [Daucus carota subsp. sativus])

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-12
Identity = 45/73 (61.64%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELS+S  E+LP NYAEQ               E VH TVSVIFED
Sbjct: 518 CAMINNNLRCYDLAMELSSSTIESLPPNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFED 577

HSP 2 Score: 158.3 bits (399), Expect = 8.8e-35
Identity = 105/174 (60.34%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLGIEAKEAAVREVAKLLPLPELLQS-ISSIKADYITRQQANDAQLSTMVAEQVEQ 60

Query: 69  ---------------------------------------------------------DVE 123
                                                                    DVE
Sbjct: 61  AQAGLESLSLSEKTIDQLRENFISIEKLCQECQTLIENHDQIKLLSNARNNLLTTLKDVE 120

[Close]

BLAST of Clc08G07830 vs. NCBI nr
Match: XP_004140937.1 (exocyst complex component SEC6 [Cucumis sativus] >KGN46092.2 hypothetical protein Csa_005176 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-14
Identity = 49/73 (67.12%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELS S  EALPQNYAEQ               E VH TVSVIFED
Sbjct: 498 CAVINNNLRCYDLAMELSTSTIEALPQNYAEQINFEDTCKGFLEVAKEAVHLTVSVIFED 557

HSP 2 Score: 158.3 bits (399), Expect = 8.8e-35
Identity = 105/174 (60.34%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLGIEAKEAAVREVAKLLPLPELLQS-ISSIKADYITRQQANDAQLSTMVAEQVEQ 60

Query: 69  ---------------------------------------------------------DVE 123
                                                                    DVE
Sbjct: 61  AQAGLESLSLSEKTIDQLRENFISIEKLCQECQTLIENHDQIKLLSNARNNLLTTLKDVE 120

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BLAST of Clc08G07830 vs. ExPASy Swiss-Prot
Match: Q94AI6 (Exocyst complex component SEC6 OS=Arabidopsis thaliana OX=3702 GN=SEC6 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.2e-32
Identity = 96/174 (55.17%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDLG+EAKEAAVREVAKLLP+ ELLQS ISSIKADYI RQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLGVEAKEAAVREVAKLLPLPELLQS-ISSIKADYIARQQANDAQLSTMVAEQVEQ 60

Query: 69  ---------------------------------------------------------DVE 123
                                                                    DVE
Sbjct: 61  AQAGLESLSSSEKTIYELRDNFISIDKLCQECQTLIDNHDQIKLLSNARNNLNKTLKDVE 120

HSP 2 Score: 89.7 bits (221), Expect = 5.0e-17
Identity = 49/73 (67.12%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELSNS  EALPQNYAEQ               E VH TV VIFED
Sbjct: 494 CAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVRVIFED 553

[Close]

BLAST of Clc08G07830 vs. ExPASy TrEMBL
Match: A0A1R3K251 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_12104 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 151/376 (40.16%), Postives = 165/376 (43.88%), Query Frame = 0


Query: 10  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ---- 69
           MVEDLG+EAKEAAVREVAKLLP+ ELLQS IS+IKADYITRQQANDA LSTMVAEQ    
Sbjct: 1   MVEDLGVEAKEAAVREVAKLLPLPELLQS-ISTIKADYITRQQANDAQLSTMVAEQVEQA 60

Query: 70  --------------------------------------------------------DVEG 129
                                                                   DVEG
Sbjct: 61  QAGLESLALSQTTINQLRENFISIEKYCQECQNLIENHDQIKLLSNARNNLNTTLKDVEG 120

Query: 130 MMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRL-------- 189
           MM ISVEA EARDSLSDD E++NTYERLTALDGKRR ALAA ASHKE+V +L        
Sbjct: 121 MMSISVEAAEARDSLSDDKEIVNTYERLTALDGKRRFALAAVASHKEEVSKLSPQTLVRA 180

Query: 190 -------RYLSQ-----------GFIIFSILKP---------------NLMLLLL----- 204
                    L Q           G  + S+  P               NL    L     
Sbjct: 181 LRVVEMQEILDQQLAEEAAEAEGGGAMASVANPRRPGKKSTTSSASAKNLTQQKLKTQGK 240

[Close]

BLAST of Clc08G07830 vs. ExPASy TrEMBL
Match: A0A0A0K9G1 (Exocyst complex component Sec6 OS=Cucumis sativus OX=3659 GN=Csa_6G052630 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.0e-36
Identity = 107/176 (60.80%), Postives = 109/176 (61.93%), Query Frame = 0


Query: 7   CKMMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ- 66
           CKMMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ 
Sbjct: 29  CKMMVEDLGIEAKEAAVREVAKLLPLPELLQS-ISSIKADYITRQQANDAQLSTMVAEQV 88

Query: 67  -----------------------------------------------------------D 123
                                                                      D
Sbjct: 89  EQAQAGLESLSLSEKTIDQLRENFISIEKLCQECQTLIENHDQIKLLSNARNNLLTTLKD 148

[Close]

BLAST of Clc08G07830 vs. ExPASy TrEMBL
Match: A0A0A0K9G1 (Exocyst complex component Sec6 OS=Cucumis sativus OX=3659 GN=Csa_6G052630 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 49/73 (67.12%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELS S  EALPQNYAEQ               E VH TVSVIFED
Sbjct: 512 CAVINNNLRCYDLAMELSTSTIEALPQNYAEQINFEDTCKGFLEVAKEAVHLTVSVIFED 571

HSP 2 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 92/113 (81.42%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 10  MVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQDVEG 69
           ++EDLGIEAK+AAVREVAKLLP+ ELL SI+ SIKADY +RQQANDA LSTMVAEQDV G
Sbjct: 80  IMEDLGIEAKDAAVREVAKLLPLPELLASIV-SIKADYSSRQQANDAQLSTMVAEQDVGG 139

Query: 70  MMPISVEAVEARDSLSDDSELINTYERLTALDGKRRSALAAAASHKEKVGRLR 123
           MM ISVEA  ARDSL DD ELI+TYERLTALDGKRR ALAAA SHKE+VGRLR
Sbjct: 140 MMSISVEAAAARDSLHDDRELIHTYERLTALDGKRRFALAAAGSHKEEVGRLR 191

[Close]

BLAST of Clc08G07830 vs. ExPASy TrEMBL
Match: A0A165Z0L4 (Exocyst complex component Sec6 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_013169 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.9e-35
Identity = 98/141 (69.50%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDL IEAKEAAVREVAKLL + ELLQS I+SIKADY+TRQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLAIEAKEAAVREVAKLLTLPELLQS-IASIKADYLTRQQANDAQLSTMVAEQECQ 60

Query: 69  ------------------------DVEGMMPISVEAVEARDSLSDDSELINTYERLTALD 123
                                   DVEGMM ISVEA EARDSLSDD ELI+TYERLTALD
Sbjct: 61  TLIENHDQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLSDDKELISTYERLTALD 120

[Close]

BLAST of Clc08G07830 vs. ExPASy TrEMBL
Match: A0A165Z0L4 (Exocyst complex component Sec6 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_013169 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 45/73 (61.64%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELS+S  E+LP NYAEQ               E VH TVSVIFED
Sbjct: 518 CAMINNNLRCYDLAMELSSSTIESLPPNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFED 577

HSP 2 Score: 158.3 bits (399), Expect = 4.2e-35
Identity = 105/174 (60.34%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDLGIEAKEAAVREVAKLLP+ ELLQS ISSIKADYITRQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLGIEAKEAAVREVAKLLPLPELLQS-ISSIKADYITRQQANDAQLSTMVAEQVEQ 60

Query: 69  ---------------------------------------------------------DVE 123
                                                                    DVE
Sbjct: 61  AQAGLESLSLSEKTIDQLRENFISIEKLCQECQTLIENHDQIKLLSNARNNLLTTLKDVE 120

[Close]

BLAST of Clc08G07830 vs. TAIR 10
Match: AT1G71820.1 (SEC6 )

HSP 1 Score: 139.0 bits (349), Expect = 5.1e-33
Identity = 96/174 (55.17%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDLG+EAKEAAVREVAKLLP+ ELLQS ISSIKADYI RQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLGVEAKEAAVREVAKLLPLPELLQS-ISSIKADYIARQQANDAQLSTMVAEQVEQ 60

Query: 69  ---------------------------------------------------------DVE 123
                                                                    DVE
Sbjct: 61  AQAGLESLSSSEKTIYELRDNFISIDKLCQECQTLIDNHDQIKLLSNARNNLNKTLKDVE 120

HSP 2 Score: 89.7 bits (221), Expect = 3.6e-18
Identity = 49/73 (67.12%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELSNS  EALPQNYAEQ               E VH TV VIFED
Sbjct: 494 CAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVRVIFED 553

[Close]

BLAST of Clc08G07830 vs. TAIR 10
Match: AT1G71820.2 (SEC6 )

HSP 1 Score: 139.0 bits (349), Expect = 5.1e-33
Identity = 96/174 (55.17%), Postives = 101/174 (58.05%), Query Frame = 0


Query: 9   MMVEDLGIEAKEAAVREVAKLLPILELLQSIISSIKADYITRQQANDAHLSTMVAEQ--- 68
           MMVEDLG+EAKEAAVREVAKLLP+ ELLQS ISSIKADYI RQQANDA LSTMVAEQ   
Sbjct: 1   MMVEDLGVEAKEAAVREVAKLLPLPELLQS-ISSIKADYIARQQANDAQLSTMVAEQVEQ 60

Query: 69  ---------------------------------------------------------DVE 123
                                                                    DVE
Sbjct: 61  AQAGLESLSSSEKTIYELRDNFISIDKLCQECQTLIDNHDQIKLLSNARNNLNKTLKDVE 120

HSP 2 Score: 89.7 bits (221), Expect = 3.6e-18
Identity = 49/73 (67.12%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 146 CLQVNNNLRCYDLAMELSNSITEALPQNYAEQ---------------EVVHCTVSVIFED 204
           C  +NNNLRCYDLAMELSNS  EALPQNYAEQ               E VH TV VIFED
Sbjct: 516 CAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVRVIFED 575

The following BLAST results are available for this feature:

BLAST of Clc08G07830 vs. NCBI nr


Match Name	E-value	Identity	Description
OMP01169.1	4.8e-41	40.16	hypothetical protein COLO4_12104 [Corchorus olitorius]	[more]
PKU76265.1	4.6e-36	81.42	hypothetical protein MA16_Dca015585 [Dendrobium catenatum]	[more]
KZM99469.1	3.9e-35	69.50	hypothetical protein DCAR_013169 [Daucus carota subsp. sativus]	[more]
KZM99469.1	3.6e-12	61.64	hypothetical protein DCAR_013169 [Daucus carota subsp. sativus]	[more]
XP_004140937.1	5.0e-14	67.12	exocyst complex component SEC6 [Cucumis sativus] >KGN46092.2 hypothetical protei...	[more]

BLAST of Clc08G07830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AI6	7.2e-32	55.17	Exocyst complex component SEC6 OS=Arabidopsis thaliana OX=3702 GN=SEC6 PE=1 SV=1	[more]

BLAST of Clc08G07830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1R3K251	2.3e-41	40.16	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_12104 PE=3 SV=1	[more]
A0A0A0K9G1	1.0e-36	60.80	Exocyst complex component Sec6 OS=Cucumis sativus OX=3659 GN=Csa_6G052630 PE=3 S...	[more]
A0A0A0K9G1	2.4e-14	67.12	Exocyst complex component Sec6 OS=Cucumis sativus OX=3659 GN=Csa_6G052630 PE=3 S...	[more]
A0A165Z0L4	1.9e-35	69.50	Exocyst complex component Sec6 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_...	[more]
A0A165Z0L4	1.7e-12	61.64	Exocyst complex component Sec6 OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_...	[more]

Pages

BLAST of Clc08G07830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71820.1	5.1e-33	55.17	SEC6	[more]
AT1G71820.2	5.1e-33	55.17	SEC6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010326	Exocyst complex component EXOC3/Sec6	PANTHER	PTHR21292	EXOCYST COMPLEX COMPONENT SEC6-RELATED	coord: 9..65 coord: 145..204
IPR010326	Exocyst complex component EXOC3/Sec6	PANTHER	PTHR21292	EXOCYST COMPLEX COMPONENT SEC6-RELATED	coord: 65..122
None	No IPR available	PANTHER	PTHR21292:SF15	BNACNNG07830D PROTEIN	coord: 9..65 coord: 65..122
None	No IPR available	PANTHER	PTHR21292:SF15	BNACNNG07830D PROTEIN	coord: 145..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G07830.2	Clc08G07830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006887	exocytosis
cellular_component	GO:0000145	exocyst