Clc08G07170 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G07170
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Germin-like protein
Location	ClcChr08: 18730750 .. 18731610 (+)
RNA-Seq Expression	Clc08G07170
Synteny	Clc08G07170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTCCCATTCCCCACCATATATCACCCATTATTTCTTACTCTAATGGCGACTCCTCCATCTTTGTTTCTCTCATTACTTCTTCTCCATTTCTCCTTCAAATTCGACCTCGCCCGTTCCGATCCCGACCCGCTTCAAGATTTCTGCGTAGCCGATTTGAAAGCTTCCACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCCAATTTAGCCAATGTAGATCACTTCAAAACATCAGCCTTATACCTACCAGGAAACACCAAAAGCAACCGTTTTGGCTTCAGCGTTACACTCACAAACCCTCAAAACTTGCCTGGAATCAACACACTGGGCTTGACCTTGGCTCGAATCGACCTCGAGCCCAAAGGGCTTGTGCCACTTCACTCGCACCCACGAGCCTCGGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGCTTTGTTGACACTTTAAATCGTGTGTTCACTAAGAAAATTGGGCCTGGAGAATCGTTTGTTTTCCCAAAAGGGTTAATCCATTTTATGTATAATGAAGATTTGAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCCCAATTGTTGGGTTTGGCTGCTTTCATTTCTAAACCTGAAATTCCTCAAGAAGTGTTGACGAAATCTTTCCAAATTAGTGAATGTGAAATCTCTCATATTCGTAAGAGCCTTGGAGGTTAAATTTTATGTTTGTTATTTGTATATTGTGTTGGCTGACTTGACTCATGTATTTTAAGTAATTTATGTATTGATAAAAGACTCTTTTTTATAGAAGAGTCAAAATTATGAACATTCAATAACAACAAACTGTGTTTTCTTTTTCT

mRNA sequence

GTTTCTCCCATTCCCCACCATATATCACCCATTATTTCTTACTCTAATGGCGACTCCTCCATCTTTGTTTCTCTCATTACTTCTTCTCCATTTCTCCTTCAAATTCGACCTCGCCCGTTCCGATCCCGACCCGCTTCAAGATTTCTGCGTAGCCGATTTGAAAGCTTCCACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCCAATTTAGCCAATGTAGATCACTTCAAAACATCAGCCTTATACCTACCAGGAAACACCAAAAGCAACCGTTTTGGCTTCAGCGTTACACTCACAAACCCTCAAAACTTGCCTGGAATCAACACACTGGGCTTGACCTTGGCTCGAATCGACCTCGAGCCCAAAGGGCTTGTGCCACTTCACTCGCACCCACGAGCCTCGGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGCTTTGTTGACACTTTAAATCGTGTGTTCACTAAGAAAATTGGGCCTGGAGAATCGTTTGTTTTCCCAAAAGGGTTAATCCATTTTATGTATAATGAAGATTTGAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCCCAATTGTTGGGTTTGGCTGCTTTCATTTCTAAACCTGAAATTCCTCAAGAAGTGTTGACGAAATCTTTCCAAATTAGTGAATGTGAAATCTCTCATATTCGTAAGAGCCTTGGAGGTTAAATTTTATGTTTGTTATTTGTATATTGTGTTGGCTGACTTGACTCATGTATTTTAAGTAATTTATGTATTGATAAAAGACTCTTTTTTATAGAAGAGTCAAAATTATGAACATTCAATAACAACAAACTGTGTTTTCTTTTTCT

Coding sequence (CDS)

ATGGCGACTCCTCCATCTTTGTTTCTCTCATTACTTCTTCTCCATTTCTCCTTCAAATTCGACCTCGCCCGTTCCGATCCCGACCCGCTTCAAGATTTCTGCGTAGCCGATTTGAAAGCTTCCACATCTTCCTTTTTCAATGGTATCCCTTGCATCAACCCCAATTTAGCCAATGTAGATCACTTCAAAACATCAGCCTTATACCTACCAGGAAACACCAAAAGCAACCGTTTTGGCTTCAGCGTTACACTCACAAACCCTCAAAACTTGCCTGGAATCAACACACTGGGCTTGACCTTGGCTCGAATCGACCTCGAGCCCAAAGGGCTTGTGCCACTTCACTCGCACCCACGAGCCTCGGAGGTCACCATTTGCTTGATTGGCCAAATGGTTGTGGGCTTTGTTGACACTTTAAATCGTGTGTTCACTAAGAAAATTGGGCCTGGAGAATCGTTTGTTTTCCCAAAAGGGTTAATCCATTTTATGTATAATGAAGATTTGAAGAAGTCTGCTGTTGCTGTTTCTGGGCTTAATAGCCAAAACCCTGGTGCCCAATTGTTGGGTTTGGCTGCTTTCATTTCTAAACCTGAAATTCCTCAAGAAGTGTTGACGAAATCTTTCCAAATTAGTGAATGTGAAATCTCTCATATTCGTAAGAGCCTTGGAGGTTAA

Protein sequence

MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG

Homology

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BLAST of Clc08G07170 vs. NCBI nr
Match: XP_038886466.1 (germin-like protein subfamily 1 member 1 [Benincasa hispida])

HSP 1 Score: 417.5 bits (1072), Expect = 7.0e-113
Identity = 210/223 (94.17%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MAT PSLFLSLLLL FSF FDLARSDPDPLQDFCVAD KASTSSFFNGIPCINPNLANVD
Sbjct: 1   MAT-PSLFLSLLLLQFSFNFDLARSDPDPLQDFCVADPKASTSSFFNGIPCINPNLANVD 60

Query: 61  HFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HFKTSAL LPGNTK NRFGFSVTLT PQNLPGINTLG+TLARIDLEPKGLVPLHSHPRAS
Sbjct: 61  HFKTSALSLPGNTKGNRFGFSVTLTTPQNLPGINTLGITLARIDLEPKGLVPLHSHPRAS 120

Query: 121 EVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ 180
           EVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ
Sbjct: 121 EVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ 180

Query: 181 NPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           NPGAQLL LAAF SKPEIPQEVL+KSFQISECEIS IRKSLGG
Sbjct: 181 NPGAQLLALAAFTSKPEIPQEVLSKSFQISECEISRIRKSLGG 222

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BLAST of Clc08G07170 vs. NCBI nr
Match: XP_008456470.1 (PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo] >KAA0036453.1 germin-like protein subfamily 1 member 1 [Cucumis melo var. makuwa] >TYK00033.1 germin-like protein subfamily 1 member 1 [Cucumis melo var. makuwa])

HSP 1 Score: 408.7 bits (1049), Expect = 3.3e-110
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MAT PS FL LLLLH S KFD ARSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA VD
Sbjct: 1   MAT-PSFFLLLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATVD 60

Query: 61  HFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HFKTSAL LPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRAS
Sbjct: 61  HFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRAS 120

Query: 121 EVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ 180
           EVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNSQ
Sbjct: 121 EVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQ 180

Query: 181 NPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           NPGAQL  LAAF SKPEIPQEVL KSFQISECEI+HIRKSLGG
Sbjct: 181 NPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

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BLAST of Clc08G07170 vs. NCBI nr
Match: XP_004146743.1 (germin-like protein subfamily 1 member 1 [Cucumis sativus] >KGN47812.1 hypothetical protein Csa_003025 [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 3.6e-109
Identity = 201/224 (89.73%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 1   MATPP-SLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP   L LSLLLLH SFKF+  RSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA V
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
           DHFKTSAL LPGNTKSNRFGFSVT+TNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQLL LA F SKPEIP+EVL KSFQISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

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BLAST of Clc08G07170 vs. NCBI nr
Match: XP_022951595.1 (germin-like protein subfamily 1 member 1 [Cucurbita moschata])

HSP 1 Score: 375.9 bits (964), Expect = 2.3e-100
Identity = 187/224 (83.48%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MATPPSLFLSLL-LLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP SL LSLL +L+ + +FD+ARSDPDPLQD+CVAD KASTSSFFNGIPCINPNLAN 
Sbjct: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60

Query: 61  DHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
            HF TSAL LPGNTK N FGFSVTLTN QNLPGINTLGLTLARID+  +G+VPLHSHPRA
Sbjct: 61  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDT NRVFTKK+GPGESFVFPKGL+HFMYNED+K SAVAVSGLNS
Sbjct: 121 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQL+ LAAF SKPEIP+EVL KSF+ISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 223

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BLAST of Clc08G07170 vs. NCBI nr
Match: XP_023537083.1 (germin-like protein subfamily 1 member 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 4.0e-100
Identity = 186/224 (83.04%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MATPPSLFLSLL-LLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP SL LSLL +L+ + +FD+ARSDPDPLQD+CVAD KASTSSFFNGIPCINPNLAN 
Sbjct: 20  MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 79

Query: 61  DHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
            HF TSAL LPGNTK N FGFSVTLTN QNLPGINTLGLTLARID+  +G+VPLHSHPRA
Sbjct: 80  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGARGIVPLHSHPRA 139

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDT NRVFTKK+GPGESFVFPKGL+HFMYNED+K SAVAVSGLNS
Sbjct: 140 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNS 199

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQL+ LAAF SKP+IP+EVL KSF+ISECEI+HIRKSLGG
Sbjct: 200 QNPGAQLVALAAFGSKPQIPEEVLKKSFEISECEIAHIRKSLGG 242

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BLAST of Clc08G07170 vs. ExPASy Swiss-Prot
Match: P92998 (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP7 PE=2 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-60
Identity = 116/213 (54.46%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 12  LLLHFSFKFDLARSDPDPLQDFCVADLKASTSS-FFNGIPCINPNLANVDHFKTSALYLP 71
           +LL  +      +SDPDPLQD+CV+   +S    F NG  C +P  A+V  F TSAL  P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 72  GNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIGQM 131
           GNTK+  F  +VT+T   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 132 VVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLGLA 191
           +VGFVDT  RVFT+++ PGE+FVFPKGLIHF+YN D   SA+AVSGL+SQNPG Q++ L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 192 AFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           +FISKP    EVL  ++ I+  +++ IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]

BLAST of Clc08G07170 vs. ExPASy Swiss-Prot
Match: Q8H021 (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0179100 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.5e-54
Identity = 106/216 (49.07%), Postives = 146/216 (67.59%), Query Frame = 0


Query: 12  LLLHFSFKFDLARSDPDPLQDFCVADLKASTSS---FFNGIPCINPNLANVDHFKTSALY 71
           +LL  +    L R DPD L D+CVAD  A+T++     NG+ CI+P LA  DHF TSAL 
Sbjct: 9   ILLSLALFAVLCRCDPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALS 68

Query: 72  LPGNTKSNRFGFSVTLTNP-QNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLI 131
              N  +  +GF+ TLT+P  +LPG N  GL +ARIDL P G+ P HSHPRASE  + L 
Sbjct: 69  RATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLS 128

Query: 132 GQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLL 191
           G ++VGF DT  R++T+ +  GE+FVFP+ ++HF+YN D    AV +SGLNSQ+PGAQL+
Sbjct: 129 GSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLV 188

Query: 192 GLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
             +AF ++P +P EVL K+F+I+  ++  I+K LGG
Sbjct: 189 PFSAFRTEPRLPDEVLKKAFKITGQDVQRIQKHLGG 224

[Close]

BLAST of Clc08G07170 vs. ExPASy Swiss-Prot
Match: Q6YZZ6 (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica OX=39947 GN=GER1 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 101/219 (46.12%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MA+  SL+L   LL  +  +     DP PLQDFCVAD+K+      NG PC NP   N D
Sbjct: 1   MASSSSLYLLAALLALA-SWQAIAFDPSPLQDFCVADMKSPVR--VNGFPCKNPMEVNSD 60

Query: 61  HFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
            F  +A +    +  N+ G +VT  N  N PG+NTLG++LARID  P G+ P H HPRA+
Sbjct: 61  DFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRAT 120

Query: 121 EVTICLIGQMVVGFV-DTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           E+   L G + VGFV    NR+F+K +  G++FVFPK +IHF  N D  K AVA S LNS
Sbjct: 121 ELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           QNPG   +  A F SKP I  +VLTK+FQ+ +  I  ++
Sbjct: 181 QNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLK 216

[Close]

BLAST of Clc08G07170 vs. ExPASy Swiss-Prot
Match: Q6YZA6 (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-44
Identity = 101/221 (45.70%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MA+P SL L   L   S++     SDP PLQDFCVAD+ +      NG  C+NP   N D
Sbjct: 1   MASPSSLCLLAALALISWQ--AMASDPSPLQDFCVADMHSPVR--VNGFACLNPMEVNAD 60

Query: 61  H-FKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
           H FK + L  P   K+N+ G +VTL N   +PG+NTLG+++ARID  P G  P H+HPRA
Sbjct: 61  HFFKAAKLDTP--RKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRA 120

Query: 121 SEVTICLIGQMVVGFV--DTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGL 180
           +E+   L G + VGFV  +  N +F+K +  G+ FVFP+GLIHF +N +  + AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           +SQNPGA  +  A F SKP I  EVL K+FQ+ +  I  ++
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 215

[Close]

BLAST of Clc08G07170 vs. ExPASy Swiss-Prot
Match: Q6YZY5 (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.5e-44
Identity = 99/220 (45.00%), Postives = 137/220 (62.27%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MA+   L L+ LL   S++     SDP PLQDFCVAD+ +      NG  C+NP   N D
Sbjct: 1   MASSSFLLLATLLAMASWQG--MASDPSPLQDFCVADMHSPV--LVNGFACLNPKDVNAD 60

Query: 61  HFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HF  +A+ L    K+N+ G +VTL N   +PG+NTLG+++ARID  P G  P H+HPRA+
Sbjct: 61  HFFKAAM-LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRAT 120

Query: 121 EVTICLIGQMVVGFVDTL--NRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLN 180
           E+   L G + VGFV +   N+ F+K +  G+ FVFP GLIHF +N +  K AVA++ L+
Sbjct: 121 EILTVLEGTLYVGFVTSNPDNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALS 180

Query: 181 SQNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           SQNPGA  +  A F SKP I  +VL K+FQ+ +  I  ++
Sbjct: 181 SQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQ 215

[Close]

BLAST of Clc08G07170 vs. ExPASy TrEMBL
Match: A0A5A7T0P4 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00780 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MAT PS FL LLLLH S KFD ARSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA VD
Sbjct: 1   MAT-PSFFLLLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATVD 60

Query: 61  HFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HFKTSAL LPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRAS
Sbjct: 61  HFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRAS 120

Query: 121 EVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ 180
           EVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNSQ
Sbjct: 121 EVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQ 180

Query: 181 NPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           NPGAQL  LAAF SKPEIPQEVL KSFQISECEI+HIRKSLGG
Sbjct: 181 NPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]

BLAST of Clc08G07170 vs. ExPASy TrEMBL
Match: A0A1S3C4L1 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103496414 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MATPPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVD 60
           MAT PS FL LLLLH S KFD ARSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA VD
Sbjct: 1   MAT-PSFFLLLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATVD 60

Query: 61  HFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRAS 120
           HFKTSAL LPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRAS
Sbjct: 61  HFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRAS 120

Query: 121 EVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQ 180
           EVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNSQ
Sbjct: 121 EVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNSQ 180

Query: 181 NPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           NPGAQL  LAAF SKPEIPQEVL KSFQISECEI+HIRKSLGG
Sbjct: 181 NPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]

BLAST of Clc08G07170 vs. ExPASy TrEMBL
Match: A0A0A0KHF1 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G404270 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 201/224 (89.73%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 1   MATPP-SLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP   L LSLLLLH SFKF+  RSDPDPLQDFCVAD KASTSSFFNGIPCINPNLA V
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  DHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
           DHFKTSAL LPGNTKSNRFGFSVT+TNPQNLPGINTLGLTLARIDL+P+GLVPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIGQMVVGFVDT NRVFTKKIGPGESFVFPKGL+HFMYNED KKSAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQLL LA F SKPEIP+EVL KSFQISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]

BLAST of Clc08G07170 vs. ExPASy TrEMBL
Match: A0A6J1GJA1 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454359 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 187/224 (83.48%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MATPPSLFLSLL-LLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP SL LSLL +L+ + +FD+ARSDPDPLQD+CVAD KASTSSFFNGIPCINPNLAN 
Sbjct: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60

Query: 61  DHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
            HF TSAL LPGNTK N FGFSVTLTN QNLPGINTLGLTLARID+  +G+VPLHSHPRA
Sbjct: 61  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDT NRVFTKK+GPGESFVFPKGL+HFMYNED+K SAVAVSGLNS
Sbjct: 121 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQL+ LAAF SKPEIP+EVL KSF+ISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 223

[Close]

BLAST of Clc08G07170 vs. ExPASy TrEMBL
Match: A0A6J1KN11 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496071 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99
Identity = 187/224 (83.48%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 1   MATPPSLFLSLL-LLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANV 60
           MATP SL LSLL +L  + +FD+ARSDPDPLQD+CVAD KASTSSFFNGIPCINPNLAN 
Sbjct: 1   MATPSSLLLSLLIILSLASEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60

Query: 61  DHFKTSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRA 120
            HF TSAL LPGNTK N FGFSVTLTN QNLPGINTLGLTLARID+  +G+VPLHSHPRA
Sbjct: 61  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGARGIVPLHSHPRA 120

Query: 121 SEVTICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDT NRVFTKK+GPGESFVFPKGL+HFMYNED K SAVAVSGLNS
Sbjct: 121 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDGKNSAVAVSGLNS 180

Query: 181 QNPGAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           QNPGAQL+ LAAF SKPEIP+EVL KSF+ISECEI+HIRKSLGG
Sbjct: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 223

[Close]

BLAST of Clc08G07170 vs. TAIR 10
Match: AT1G10460.1 (germin-like protein 7 )

HSP 1 Score: 233.0 bits (593), Expect = 2.3e-61
Identity = 116/213 (54.46%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 12  LLLHFSFKFDLARSDPDPLQDFCVADLKASTSS-FFNGIPCINPNLANVDHFKTSALYLP 71
           +LL  +      +SDPDPLQD+CV+   +S    F NG  C +P  A+V  F TSAL  P
Sbjct: 5   ILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRP 64

Query: 72  GNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIGQM 131
           GNTK+  F  +VT+T   NLPG+NT+GLT+AR+D    G+VP H HPRASEVT+CL G +
Sbjct: 65  GNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVL 124

Query: 132 VVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLGLA 191
           +VGFVDT  RVFT+++ PGE+FVFPKGLIHF+YN D   SA+AVSGL+SQNPG Q++ L+
Sbjct: 125 LVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLS 184

Query: 192 AFISKPEIPQEVLTKSFQISECEISHIRKSLGG 224
           +FISKP    EVL  ++ I+  +++ IRKSL G
Sbjct: 185 SFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]

BLAST of Clc08G07170 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-40
Identity = 94/215 (43.72%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 5   PSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKT 64
           P+L L LLL   SF F  + +DPD LQD CVADL +      NG PC +        F +
Sbjct: 4   PTLTLLLLLTTVSF-FISSSADPDMLQDLCVADLPSGIK--INGFPCKDAATVTSADFFS 63

Query: 65  SALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTI 124
             L  PG T +N FG  VT  N   +PG+NTLG++L+RID  P GL P H+HPRA+EV  
Sbjct: 64  QGLAKPGLT-NNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVF 123

Query: 125 CLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNE-DLKKSAVAVSGLNSQNPG 184
            L G + VGF+ T N++ ++ +  G+ F FPKGL+HF  N  D+  S +A    NSQ PG
Sbjct: 124 VLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIA--AFNSQLPG 183

Query: 185 AQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
            Q LG   F S P +P  +L ++FQ S   + HI+
Sbjct: 184 TQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIK 212

[Close]

BLAST of Clc08G07170 vs. TAIR 10
Match: AT3G05950.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 3.8e-40
Identity = 88/187 (47.06%), Postives = 119/187 (63.64%), Query Frame = 0


Query: 26  DPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKTSALYLPGNTKSNRFGFSVTLT 85
           DP PLQDFCVA +  ++  F NG  C +P     + F TS L + GNT  NR G +VT  
Sbjct: 26  DPSPLQDFCVA-VDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNT-INRVGSNVTNV 85

Query: 86  NPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTICLIGQMVVGFVDT---LNRVF 145
           N   +PG+NTLG++L RID  P G  P H+HPRA+E+ + + G ++VGFV +    NR+F
Sbjct: 86  NVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLF 145

Query: 146 TKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPGAQLLGLAAFISKPEIPQEV 205
           +K + PG+ FVFP G+IHF  N   + +AVA +GL SQNPG   +  A F SKP I  E+
Sbjct: 146 SKVLYPGDVFVFPIGMIHFQVNVG-RTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEI 205

Query: 206 LTKSFQI 210
           L K+FQ+
Sbjct: 206 LAKAFQL 209

[Close]

BLAST of Clc08G07170 vs. TAIR 10
Match: AT1G18970.1 (germin-like protein 4 )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 90/215 (41.86%), Postives = 127/215 (59.07%), Query Frame = 0


Query: 4   PPSLFLSLLLLHFSFKFDLARSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFK 63
           P +L  S LL+   F      SD DPLQDFCV DLKAS S   NG PC   +  +   F 
Sbjct: 7   PSALLRSFLLMFCLFVIPSLSSDSDPLQDFCVGDLKASAS--INGFPC--KSAVSASDFF 66

Query: 64  TSALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVT 123
            S L  P +T SN  G +V   N    PG+NTLG+++  ++L P G+ P H HPRA+EV 
Sbjct: 67  YSGLGGPLDT-SNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVG 126

Query: 124 ICLIGQMVVGFVDTLNRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNPG 183
             + G + VGF+ T N +F+K +  GE+FV P+GL+HF +N    K+ + ++  NSQ PG
Sbjct: 127 TVIEGSVFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARM-ITAFNSQLPG 186

Query: 184 AQLLGLAAFISKPEIPQEVLTKSFQISECEISHIR 219
           A +L    F SKPEIP  VLT++F+  +  + +++
Sbjct: 187 AVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLK 215

[Close]

BLAST of Clc08G07170 vs. TAIR 10
Match: AT5G38960.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 91/220 (41.36%), Postives = 126/220 (57.27%), Query Frame = 0


Query: 6   SLFLSLLLLHFSFKFDLA-RSDPDPLQDFCVADLKASTSSFFNGIPCINPNLANVDHFKT 65
           +L+L++L L  +     A  SDP PLQDFC+     + + F NG  C +P L   D F  
Sbjct: 3   NLYLAILYLLAASTLPFAIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYF 62

Query: 66  SALYLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLEPKGLVPLHSHPRASEVTI 125
           S L     T+S+  G +VT  N   +PG+NTLG++L RID    G  P H+HPRA+E+ +
Sbjct: 63  SGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILL 122

Query: 126 CLIGQMVVGFVDTL--NRVFTKKIGPGESFVFPKGLIHFMYNEDLKKSAVAVSGLNSQNP 185
              G + VGF  +   NR+F K +  G+ FVFP+GLIHF  N   K+ AVA + L+SQNP
Sbjct: 123 VQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIG-KQPAVAFASLSSQNP 182

Query: 186 GAQLLGLAAFISKPEIPQEVLTKSFQISECEISHIRKSLG 223
           G  ++G   F SKP I   VL K+FQ+    I  ++K  G
Sbjct: 183 GVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKFG 221

The following BLAST results are available for this feature:

BLAST of Clc08G07170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886466.1	7.0e-113	94.17	germin-like protein subfamily 1 member 1 [Benincasa hispida]	[more]
XP_008456470.1	3.3e-110	91.48	PREDICTED: germin-like protein subfamily 1 member 1 [Cucumis melo] >KAA0036453.1...	[more]
XP_004146743.1	3.6e-109	89.73	germin-like protein subfamily 1 member 1 [Cucumis sativus] >KGN47812.1 hypotheti...	[more]
XP_022951595.1	2.3e-100	83.48	germin-like protein subfamily 1 member 1 [Cucurbita moschata]	[more]
XP_023537083.1	4.0e-100	83.04	germin-like protein subfamily 1 member 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc08G07170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92998	3.2e-60	54.46	Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP7...	[more]
Q8H021	4.5e-54	49.07	Germin-like protein 3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0179100...	[more]
Q6YZZ6	1.5e-44	46.12	Germin-like protein 8-4 OS=Oryza sativa subsp. japonica OX=39947 GN=GER1 PE=2 SV...	[more]
Q6YZA6	1.5e-44	45.70	Germin-like protein 8-5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189400...	[more]
Q6YZY5	5.5e-44	45.00	Germin-like protein 8-11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g019010...	[more]

BLAST of Clc08G07170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0P4	1.6e-110	91.48	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G...	[more]
A0A1S3C4L1	1.6e-110	91.48	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103496414 PE=3 SV=1	[more]
A0A0A0KHF1	1.7e-109	89.73	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G404270 PE=3 SV=1	[more]
A0A6J1GJA1	1.1e-100	83.48	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454359 PE=3 SV=1	[more]
A0A6J1KN11	1.3e-99	83.48	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496071 PE=3 SV=1	[more]

BLAST of Clc08G07170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10460.1	2.3e-61	54.46	germin-like protein 7	[more]
AT1G09560.1	1.3e-40	43.72	germin-like protein 5	[more]
AT3G05950.1	3.8e-40	47.06	RmlC-like cupins superfamily protein	[more]
AT1G18970.1	1.1e-39	41.86	germin-like protein 4	[more]
AT5G38960.1	1.4e-39	41.36	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 144..164 score: 49.83 coord: 114..134 score: 49.5 coord: 178..193 score: 43.6
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 65..215 e-value: 1.8E-32 score: 123.9
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 70..211 e-value: 2.1E-39 score: 134.5
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 25..223 e-value: 4.6E-67 score: 227.3
None	No IPR available	PANTHER	PTHR31238:SF5	GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1	coord: 11..222
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 11..222
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 26..221 e-value: 1.29297E-71 score: 214.382
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 109..122
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 26..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G07170.1	Clc08G07170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding