Clc08G06580 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G06580
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr08: 18018324 .. 18019710 (+)
RNA-Seq ExpressionClc08G06580
SyntenyClc08G06580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCCGTCACTTTCGCCATATGAATATGAACTGCAAGCAAAGAGAAGGCGCTTACGTTGTTCTCCCCCACCGCCACCGCCACCGCCCAGCTACCAATGGCCACAAAAGCCCATCCCTAGATCTCCTCCACCTCCTTTCTAACGCACAGACACTACTAAAATTGTTTGCAAGCATCGTCACCAAGGTAAACTCATTGGCTTTGTCATTTTGTGGAAGGTTTTAGTCAGTAGGGTTGGATTATTGGAATAAAATGGCTGTTCATAATTAATTACATTCCATTTAATTTGTTTCACATTTAAGTTTCTTTTTAGTAAAATAAGTGGGTTACATAATCTTTACAAGAACGTGGTGGTCCTTATGTTTATTAATTTGGTACAAAGTCCAAACAGGTATTTGATCAAAAATAATAATAATAATAATAATAATAATAATAATAATAATCTCACACAAAAGAATGGTAAAGTCAACTATCTTGAAGGGTATGTTGAGGATTTCATACGTTGTCCTTTTTTTAAATACCTATGAACTATCCTCAACTCGGTGGCAACATCCCCTCTTCCAGACTCCATAGATGAAATGCTCTTTGTCATAACACACATCAAACAAAATAGCAAGAAGAAAGTGTTATGGACAAATCTAATTGGAGCTTGCTTCTAGTGCATCTAGTTGGAGAGAAACAACATAACCTTCAAAGACGAGGAAAAGCATCCAAACCACATGTGGGAAGACATCATCTATCTTACTGCGTTATGGAGTACTAAATCTACTTTATTTTGTGACTATAATGTTTATCGTACAACCCTCAACTGGAAAGTTTTCCTTTAGCCTCCTTTTGTTTTTTTTTTTTTTTGGCTTTGCTTATTGGCCTACACACTAACTTAATAAATTTGAGTATTAGCATCTTGATATAATATTAATTAAATTTACCCTAATTTCATTAGCTTAAGAGTTAGATCATGTCTTAATTAAGTACAATTTCATATTTTTTTACTCTTTCTTATTCTCGCATTAGTTGACTATTTGGTGTATTTTCTCTCCTAATAAATAACAAAATTTCTCTCATTTTTCTATAGAAAAGGGCCGGAAAGGAAAAGTTTAGTTAATTACTAAGGTTAATATAGGGAAAAATTGATTAATTTCATATCTCTTGCAGAAAGGAAGATTGGCCTTTGCTTTGCCTTCGCCTTGGCCTTCATCCTACTAAGCATCCGGAAGAGAGTGGGAGTTTAGCTATTTTTAATTTGGATTTAGTTTTTATTTTTATTTAGTCTCTAAATATTGAAAATATTACATGTATGCCTATATGAATGTAAATTTAATTTCTATACTTTTAACTTCAATATCATGTATGCCTCTATGAATGTAAATTTAATTTCTATCCAAACAA

mRNA sequence

CCGCCGTCACTTTCGCCATATGAATATGAACTGCAAGCAAAGAGAAGGCGCTTACGTTGTTCTCCCCCACCGCCACCGCCACCGCCCAGCTACCAATGGCCACAAAAGCCCATCCCTAGATCTCCTCCACCTCCTTTCTAACGCACAGACACTACTAAAATTGTTTGCAAGCATCGTCACCAAGAAAGGAAGATTGGCCTTTGCTTTGCCTTCGCCTTGGCCTTCATCCTACTAAGCATCCGGAAGAGAGTGGGAGTTTAGCTATTTTTAATTTGGATTTAGTTTTTATTTTTATTTAGTCTCTAAATATTGAAAATATTACATGTATGCCTATATGAATGTAAATTTAATTTCTATACTTTTAACTTCAATATCATGTATGCCTCTATGAATGTAAATTTAATTTCTATCCAAACAA

Coding sequence (CDS)

ATGAATATGAACTGCAAGCAAAGAGAAGGCGCTTACGTTGTTCTCCCCCACCGCCACCGCCACCGCCCAGCTACCAATGGCCACAAAAGCCCATCCCTAGATCTCCTCCACCTCCTTTCTAACGCACAGACACTACTAAAATTGTTTGCAAGCATCGTCACCAAGAAAGGAAGATTGGCCTTTGCTTTGCCTTCGCCTTGGCCTTCATCCTACTAA

Protein sequence

MNMNCKQREGAYVVLPHRHRHRPATNGHKSPSLDLLHLLSNAQTLLKLFASIVTKKGRLAFALPSPWPSSY
Homology
The following BLAST results are available for this feature:
BLAST of Clc08G06580 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G06580 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G06580 vs.
Match NameE-valueIdentityDescription
BLAST of Clc08G06580 vs.
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G06580.1Clc08G06580.1mRNA