Clc08G06565 (gene) Watermelon (cordophanus) v2

BLAST of Clc08G06565 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-26
Identity = 87/267 (32.58%), Postives = 123/267 (46.07%), Query Frame = 0

Query: 67  QWK--TTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNT 126
           +WK  TT+ +P+   MR FNSFI   +LIDP  SN  +TWSNL +  T+S++D+ L T+ 
Sbjct: 73  RWKEETTTKNPALLSMRRFNSFISNCNLIDPPLSNAKYTWSNLRAQATLSRLDRFLFTSQ 132

Query: 127 WEQNFNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNA-----DYLIN---YSKRL 186
           WE  F  H ++ L RT SDH+P++L S  + WGP  F+F NA     DY  N   +    
Sbjct: 133 WENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNT 192

Query: 187 SSPNGVSYS--------------------------------------------------- 246
           S P    YS                                                   
Sbjct: 193 SQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDKLEAEGSATEIHR 252

Query: 247 ------KMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQ 261
                 K D+       A+ W Q CK   + EGDEN+++FHK+C AR +   IS+I ++ 
Sbjct: 253 EKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNS 312

BLAST of Clc08G06565 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-09
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0

Query: 266 GGRLTLLKAVLSNLPTYYLSTFTAPISFYKEVEKAIRNSLWEGAEKNGDPHLVRWDIVTL 325
           GGR+TL+ + L +LP Y +S F  P    +++E + RN LW GA    +  L+RW+ +  
Sbjct: 718 GGRITLINSTLESLPIYQMSVFKVPKGIAQKIEASWRNFLWNGASNGHNISLIRWNQIVS 777

Query: 326 PKDLGGLGVEIIITSNVALLSNGYGDILLKK 357
           PK+ GGLG+  + ++N ALL       L +K
Sbjct: 778 PKEKGGLGIHSVNSTNFALLCKWLWKFLTEK 808

HSP 2 Score: 130.2 bits (326), Expect = 3.6e-26
Identity = 85/269 (31.60%), Postives = 121/269 (44.98%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T++ +PS+  MR FN FI   +LIDP  SN  FTWSNL  +P +S+ID+ L+T  WE  
Sbjct: 80  ETSAQNPSKHSMRCFNKFIADSNLIDPPLSNAKFTWSNLRVHPVLSRIDRFLYTTNWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNA--------DYLINYSKRLSSPN 188
           F  H ++ L+R  SDH+P++L S  + WGP  FK  N         + + N+ K L    
Sbjct: 140 FTAHYSKTLSRVTSDHFPIVLESSLISWGPSPFKLINVHLKEPWFKNNITNWWKNLRQEG 199

Query: 189 GVSYS------------------------------------------------------- 248
              +S                                                       
Sbjct: 200 HPGFSFMRKLKQLSTIIRNEQRKNKCYSDEDKNAWIKEIDSIDRLEAEGNLSEELSLRRT 259

Query: 249 --KMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQEVTH 266
             K D+       A+ W Q  K   ++EGDENT++FHK+C AR R + IS I  +  V  
Sbjct: 260 RLKADVLTSGFKEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSADGVPC 319

BLAST of Clc08G06565 vs. NCBI nr
Match: TYK06777.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-10
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 266 GGRLTLLKAVLSNLPTYYLSTFTAPISFYKEVEKAIRNSLWEGAEKNGDPHLVRWDIVTL 325
           GG++TL+K+ L++LPTY LS F AP+S  K +EK  RN LW+   +    HLV W  +T 
Sbjct: 693 GGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKITS 752

Query: 326 PKDLGGLGVEIIITSNVALLS 347
            K+ GGLG+  +  +N ALL+
Sbjct: 753 SKEKGGLGISRLKDTNFALLT 773

HSP 2 Score: 128.6 bits (322), Expect = 1.1e-25
Identity = 89/271 (32.84%), Postives = 121/271 (44.65%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T++ +PS+  MR FN FI   +LIDP  SN  FTWSNL   P +S+ID+ L+T  WE  
Sbjct: 80  ETSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTANWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKF------------------------- 188
           F  H ++ L+R  SDH+P+ L S  + WGP  FKF                         
Sbjct: 140 FTAHYSKTLSRVTSDHFPIALESSMISWGPSPFKFINVHLKEPWFKKNVTIWWKNLRQGG 199

Query: 189 ---------------------------------------DNADYLI---NYSKRLSSPNG 248
                                                  DN D L    N+S+ LS    
Sbjct: 200 HPGFSFMKKLKQLSAIIRDEQKKNKCYNDEEKKAWIKEIDNIDRLEAEGNFSEELSLRR- 259

Query: 249 VSYSKMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQEV 266
            +  K D+       A+ W Q  K   ++EGDENT++FHK+C AR R + IS I     V
Sbjct: 260 -TKLKADVLMSGFKEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGV 319

BLAST of Clc08G06565 vs. NCBI nr
Match: KAA0040038.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-25
Identity = 85/269 (31.60%), Postives = 118/269 (43.87%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T++ +PS+  MR FN FI   +LIDP  SN  FTWSNL   P +S+ID+ L+T  WE  
Sbjct: 80  ETSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTTNWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNADYLINYSK-------------- 188
           F  H ++ L+R  SDH+P+ L S  + WGP  FK  N     ++ K              
Sbjct: 140 FTAHYSKTLSRVTSDHFPIALESSMISWGPSPFKLINVHLKESWLKKNVTYWWKNLRQEG 199

Query: 189 -------------------------------------------RLSSPNGVSYS------ 248
                                                      RL +   +S        
Sbjct: 200 HPGFSFMRKLKQLSAIIRNEQRKNKCYSDEDKNAWIKEIDNIDRLEAEGNLSEELSLRRT 259

Query: 249 --KMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQEVTH 266
             K D+       A+ W Q  K   ++EGDENT++FHK+C AR R + IS I     V  
Sbjct: 260 RLKADVLMSGFKEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPC 319

BLAST of Clc08G06565 vs. NCBI nr
Match: KAA0067709.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-24
Identity = 75/233 (32.19%), Postives = 117/233 (50.21%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T+  +P    MR FN+FI   +LIDP  SN  +TWSNL + P +S+ID+ L+T  WE  
Sbjct: 80  ETSVQNPRHYSMRKFNNFISESNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNADYLINYSKRLSSPNGVS----- 188
           F+   ++ L+R  SDH+P++L +  + WGP  F+F N  +L +   + +  +G       
Sbjct: 140 FSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINV-HLKSRGLKTTLKDGEEKRAWV 199

Query: 189 ---------------YSKMDIRARK---------------WRQLCKLKRLSEGDENTTYF 248
                          + ++ +R  K               W Q  K    ++GDENT++ 
Sbjct: 200 KEFDDIDRIEAAGNLFEELSLRRTKIKADILSFDSKEAQIWHQKSKGLWNTDGDENTSFL 259

Query: 249 HKVCMARCRFNFISEIQDSQEVTHLSDSNIEKAFLHYFSDIYQ-NTTNVSWLI 266
           H++C AR R + IS I     +   ++ NI KAFL +F DIY  N  +  WLI
Sbjct: 260 HRICSARQRRSIISNINLVDGIPCTTNDNIVKAFLDHFEDIYNGNGEDSPWLI 311

BLAST of Clc08G06565 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 0

Query: 267 GRLTLLKAVLSNLPTYYLSTFTAPISFYKEVEKAIRNSLWEGAEKNGDPHLVRWDIVTLP 326
           GRLTL KAVLS++P + +ST   P S    +++  R  LW    +    HLV+W  V  P
Sbjct: 36  GRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSP 95

Query: 327 KDLGGLGVEIIITSNVALLS 347
           K  GGLGV    + N AL+S
Sbjct: 96  KKEGGLGVRAAKSMNRALIS 115

BLAST of Clc08G06565 vs. ExPASy TrEMBL
Match: A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.1e-27
Identity = 87/267 (32.58%), Postives = 123/267 (46.07%), Query Frame = 0

Query: 67  QWK--TTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNT 126
           +WK  TT+ +P+   MR FNSFI   +LIDP  SN  +TWSNL +  T+S++D+ L T+ 
Sbjct: 73  RWKEETTTKNPALLSMRRFNSFISNCNLIDPPLSNAKYTWSNLRAQATLSRLDRFLFTSQ 132

Query: 127 WEQNFNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNA-----DYLIN---YSKRL 186
           WE  F  H ++ L RT SDH+P++L S  + WGP  F+F NA     DY  N   +    
Sbjct: 133 WENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNT 192

Query: 187 SSPNGVSYS--------------------------------------------------- 246
           S P    YS                                                   
Sbjct: 193 SQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDKLEAEGSATEIHR 252

Query: 247 ------KMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQ 261
                 K D+       A+ W Q CK   + EGDEN+++FHK+C AR +   IS+I ++ 
Sbjct: 253 EKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNS 312

BLAST of Clc08G06565 vs. ExPASy TrEMBL
Match: A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-09
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0

Query: 266 GGRLTLLKAVLSNLPTYYLSTFTAPISFYKEVEKAIRNSLWEGAEKNGDPHLVRWDIVTL 325
           GGR+TL+ + L +LP Y +S F  P    +++E + RN LW GA    +  L+RW+ +  
Sbjct: 718 GGRITLINSTLESLPIYQMSVFKVPKGIAQKIEASWRNFLWNGASNGHNISLIRWNQIVS 777

Query: 326 PKDLGGLGVEIIITSNVALLSNGYGDILLKK 357
           PK+ GGLG+  + ++N ALL       L +K
Sbjct: 778 PKEKGGLGIHSVNSTNFALLCKWLWKFLTEK 808

HSP 2 Score: 130.2 bits (326), Expect = 1.8e-26
Identity = 85/269 (31.60%), Postives = 121/269 (44.98%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T++ +PS+  MR FN FI   +LIDP  SN  FTWSNL  +P +S+ID+ L+T  WE  
Sbjct: 80  ETSAQNPSKHSMRCFNKFIADSNLIDPPLSNAKFTWSNLRVHPVLSRIDRFLYTTNWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNA--------DYLINYSKRLSSPN 188
           F  H ++ L+R  SDH+P++L S  + WGP  FK  N         + + N+ K L    
Sbjct: 140 FTAHYSKTLSRVTSDHFPIVLESSLISWGPSPFKLINVHLKEPWFKNNITNWWKNLRQEG 199

Query: 189 GVSYS------------------------------------------------------- 248
              +S                                                       
Sbjct: 200 HPGFSFMRKLKQLSTIIRNEQRKNKCYSDEDKNAWIKEIDSIDRLEAEGNLSEELSLRRT 259

Query: 249 --KMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQEVTH 266
             K D+       A+ W Q  K   ++EGDENT++FHK+C AR R + IS I  +  V  
Sbjct: 260 RLKADVLTSGFKEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSADGVPC 319

BLAST of Clc08G06565 vs. ExPASy TrEMBL
Match: A0A5D3C4J1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00790 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.0e-11
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 266 GGRLTLLKAVLSNLPTYYLSTFTAPISFYKEVEKAIRNSLWEGAEKNGDPHLVRWDIVTL 325
           GG++TL+K+ L++LPTY LS F AP+S  K +EK  RN LW+   +    HLV W  +T 
Sbjct: 693 GGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKITS 752

Query: 326 PKDLGGLGVEIIITSNVALLS 347
            K+ GGLG+  +  +N ALL+
Sbjct: 753 SKEKGGLGISRLKDTNFALLT 773

HSP 2 Score: 128.6 bits (322), Expect = 5.1e-26
Identity = 89/271 (32.84%), Postives = 121/271 (44.65%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T++ +PS+  MR FN FI   +LIDP  SN  FTWSNL   P +S+ID+ L+T  WE  
Sbjct: 80  ETSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTANWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKF------------------------- 188
           F  H ++ L+R  SDH+P+ L S  + WGP  FKF                         
Sbjct: 140 FTAHYSKTLSRVTSDHFPIALESSMISWGPSPFKFINVHLKEPWFKKNVTIWWKNLRQGG 199

Query: 189 ---------------------------------------DNADYLI---NYSKRLSSPNG 248
                                                  DN D L    N+S+ LS    
Sbjct: 200 HPGFSFMKKLKQLSAIIRDEQKKNKCYNDEEKKAWIKEIDNIDRLEAEGNFSEELSLRR- 259

Query: 249 VSYSKMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQEV 266
            +  K D+       A+ W Q  K   ++EGDENT++FHK+C AR R + IS I     V
Sbjct: 260 -TKLKADVLMSGFKEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGV 319

BLAST of Clc08G06565 vs. ExPASy TrEMBL
Match: A0A5A7TAQ1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00050 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-25
Identity = 85/269 (31.60%), Postives = 118/269 (43.87%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T++ +PS+  MR FN FI   +LIDP  SN  FTWSNL   P +S+ID+ L+T  WE  
Sbjct: 80  ETSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTTNWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNADYLINYSK-------------- 188
           F  H ++ L+R  SDH+P+ L S  + WGP  FK  N     ++ K              
Sbjct: 140 FTAHYSKTLSRVTSDHFPIALESSMISWGPSPFKLINVHLKESWLKKNVTYWWKNLRQEG 199

Query: 189 -------------------------------------------RLSSPNGVSYS------ 248
                                                      RL +   +S        
Sbjct: 200 HPGFSFMRKLKQLSAIIRNEQRKNKCYSDEDKNAWIKEIDNIDRLEAEGNLSEELSLRRT 259

Query: 249 --KMDI------RARKWRQLCKLKRLSEGDENTTYFHKVCMARCRFNFISEIQDSQEVTH 266
             K D+       A+ W Q  K   ++EGDENT++FHK+C AR R + IS I     V  
Sbjct: 260 RLKADVLMSGFKEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPC 319

BLAST of Clc08G06565 vs. ExPASy TrEMBL
Match: A0A5A7VRD2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00150 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-25
Identity = 75/233 (32.19%), Postives = 117/233 (50.21%), Query Frame = 0

Query: 69  KTTSSHPSRRCMRNFNSFIEGGSLIDPAKSNDTFTWSNLHSNPTMSKIDQSLHTNTWEQN 128
           +T+  +P    MR FN+FI   +LIDP  SN  +TWSNL + P +S+ID+ L+T  WE  
Sbjct: 80  ETSVQNPRHYSMRKFNNFISESNLIDPPLSNAKYTWSNLRTQPILSRIDRFLYTMGWENL 139

Query: 129 FNPHQTQRLNRTISDHYPLLLVSDALRWGPCLFKFDNADYLINYSKRLSSPNGVS----- 188
           F+   ++ L+R  SDH+P++L +  + WGP  F+F N  +L +   + +  +G       
Sbjct: 140 FSARYSKTLSRVTSDHFPIILETSTVSWGPLPFRFINV-HLKSRGLKTTLKDGEEKRAWV 199

Query: 189 ---------------YSKMDIRARK---------------WRQLCKLKRLSEGDENTTYF 248
                          + ++ +R  K               W Q  K    ++GDENT++ 
Sbjct: 200 KEFDDIDRIEAAGNLFEELSLRRTKIKADILSFDSKEAQIWHQKSKGLWNTDGDENTSFL 259

Query: 249 HKVCMARCRFNFISEIQDSQEVTHLSDSNIEKAFLHYFSDIYQ-NTTNVSWLI 266
           H++C AR R + IS I     +   ++ NI KAFL +F DIY  N  +  WLI
Sbjct: 260 HRICSARQRRSIISNINLVDGIPCTTNDNIVKAFLDHFEDIYNGNGEDSPWLI 311

BLAST of Clc08G06565 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-08
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 0

Query: 267 GRLTLLKAVLSNLPTYYLSTFTAPISFYKEVEKAIRNSLWEGAEKNGDPHLVRWDIVTLP 326
           GRL L+ +V+ +L  +++S F  P +  KE++    + LW G E N     V W  V  P
Sbjct: 65  GRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTP 124

Query: 327 KDLGGLGVEIIITSN 342
           KD GGLG+  +  +N
Sbjct: 125 KDEGGLGIRSLKEAN 139