
Clc08G06270 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTAAATTCACTTATCAATTCATTTCTCTCTTTCTATATAAACTCCTCCCCCCTCCCTCCTCTTCCCCTTCTTCTATACGGTGCCGTTCTGATTCCGGCGTTTCTCATTTCCCATTGCTTCAAACTAATTTCATTCTTCACCCGCTACTGAAAATACACTCTTCATTTCTCTTTGAAATGGATATTCCGCACTTCTTGTTCGGAGTTCTTGGTAAGTTCTATTACTTTTTTTTTTTTTCCAGTGAGAAATCATGAATCAATTTCCCTTTCTTTGTTTCTCTGTTCTTGCAGGAAATGCTACTGCTCTGTTTCTATTCTTGTCGCCAATGTATGAACAACAAGCCTTCAACTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATTTCTTCTTGCATGTTCTTGGCATCGATTTCTTCTTCAAATTTCCTGTTTCTTAACCTAACCGATGGAGGATTTGATTCGTTTAATTAGGATTACTTTCAAAAGAATCATAAGAAGCAAATCGACGGAGCAATTCTCTGGCATTCCATATGTTATGACGATGCTGAATTGCCTTTTATCCGCTTGGTATGATTTGTCTTTCGAATTAATTAGTGTTTTGGTGTTGAAATGGATTTTGATTTTGAATTTGAATTTGTTTGAAAAAAGGTATGGATTACCGTTTGTGTCGCCACATAATATACTGGTATCGACGATAAACGGAACAGGGGCGGCGATAGAGATAATTTACGTGATGATTTTCATAATCTACGCGCCGAAGAAGGAGAAGGGGAAAATCGGAGGATTGTTTACATTTGCGATGGGAGCTTTCGCGGCGGTGGCTTTGGTGTCGGTCTTTGCGTTGCAAGGCAAAAACAGAAAGCTCTTCTGCGGCTTGGCTGCCTCGGTTTTTTCCATCATCATGTACGGCTCCCCACTCTCCATAATGGTAAGTCCTTTTTTCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTTAACTTCGTTTGTATTTACAGAAAGTAATTAATGAATGATTTGTTAGTTTCAACTTTTTTAAGGTACTTTTTTGCTTCTTCTTTTTTATTTTTTTCACGTGAAGTGAAGTTGTTATCACTGCTGGTTTTCTGTGGTAGGGAGTAGGGTTAAGATTTTTTTATTTTATTTTATTGGAAGGAAAACAGATATTTATAATCGAGTTTCAAGGCTCACTTTAATTTATTATTATTATTATTTTTTTTTTGTAAAGGATAAAATTGGTTTTTTAAAGAAAATAAATAAATTAAGCTTGTAATTTATACATTCGTCTAGAGTATCTTTTGCTGTTTTTTTGGGGTGTTTTTAAAATTATAACAAGTTATGAAAACATTTAAAAATTTGGTTAAAAATATAAATCTTTTCATTCGAAAACTATCCTTAAAAAAAAGTGAGCTTTGAAAATAATATATAATTAACACATTTCTTTTACAACTCACCCCAATAAGAAAAACTAATACGTGTTTTCTTTTTCTAAAATAAAAATAAAATTTTTCATAGACAAACTATAGCTGAATATTACTATTTTATAAAGTAGATGTGTATTTTTTATAGAAAAAAAGAAAAAGAAAAAGAAACAAATTGGCATTTTTTAGAATTTAAGTTTTGTAAATTAACTGTTATAGACGGTGGAGAGAAGGGAATCTGTTGTGTGTTTTGTTTTCTTGAAAAGAAGATGGTCCAAAACTGACTGGTGAAGAGTGGTTGAAATTTTGTTACTATGGACAAGAATTATTGTAATTTTTTTTTTTTCCTTTTTTGGACGTGTCCTTTTAAAAACCCACCCTGTTCTCACTTTTCACCTATCTCAACTATTTTTCTCTCTTACGTCCTTTCCAATTTTGGCAATTTTTTTGACTTGGAAAAAAGCGTTAGTTCAGAATCTTTTCATTGTCACCAAATCTTTTATTATTATTGTTATTACTATTTCATGTTGACTGGTTGTTTTAGCTTCAATCTGGCTTAATTACTGCCATATTTCAATTATCTAAGATTTAATTAGTGAAATTAATTCTCTAAAATAATAAATTGCTCTCCATTGGTTGATTATGTATTATTTACGTTTTCTGGCATAACAATTTGAAATAATTGTGCATGGTGTGGTGTGGTGGTACAGAGAACAGTGATAAAGACGAAGAGTGTGGAGTTTATGCCATTTTTCCTGTCGTTGTTCGTGTTCTTGTGTGGCACATCTTGGTTCATATATGGCCTTCTTGGCCGCGACCCTTTTGTTGCTGTAAGTATTTCTTTTCGTCTCTTTCCCTTTCTTTTTCTTTCAACTTCCTCCTTTGGTTTTTTCTGCTTTCGTTTTCATGCCTATAACAATCCCCCATCCATTTTGCTCACACACACCAATTACTTCCAAAAACTTTCCTTATTCTTCTTTCTTTTTATTTTACTACTTCTTATTTCTATTAAAAAATCGATTTTATCTTTGTTTTCTCTCCATTTTCTTTTCTTACCAGGATTTTCATATTTTCTTAAAAAGATATTAGAAAAATAGATAAAAAAAAAAAAAACAAATAAAACTTAGAGGGGGTGTACTCTTTACCATTTTACTTTTTGTAAACAAAAAATGAGAAACTAAGTTCACGTTTTATAACCATTTAGTTTTTTGTTTTTGTTTTAACCCAATAGACAACTTCCATCTCCAAATTTCTTCATTTGTTGTTTAGTTTTTATCGATGGTCTAAAAAACTAAACCAAATTTTGAAACCTAAAGAACCTAGCTTTTAAAACTTTTTTTTTTTTAATTTAGCTAAAAATTCAATTATTATACTTAAGAAAGATGCAAACCATGGTAAGAAATGGGAAGGAAATAGGCTTAATTTTCAAAAACCAAAAACTAAAAACGATATAGTTACAAAACAAGGTCTAAATAATTACCCGATGGACCTGAATGATAGGATTACTTATTATATCTTTGGTTCAATTTGATAATTGTAATTTCATATTTTTAATTTTTGTCATAAAATTCTAAAACATAATTATTTTGTGCTGTATTTGTAAATAAAAAAAAATATATACATGCCTGGTAAGTATACAAAACTAATTGCAATGAGTAGTAATTTTAGCGATAATTATTGAGTGTATAACCACATTTTAAAAGAATAGTAAATATAGTAAATAGTAAATAGAATCTATTATATGTGGAAATACTATATATGCAACTTTTATTCTAGTTTTTTACTCTTACGATAAGATCCAATGAGTATGCATGCGAGAAATTGGATGAGGTTGTTGGGAAGAGGGTATGTTGTTTTATTAATGCAATAATTGAGGTAGATTTAATTGGTGGGTTTTGATGTGGGGAATTGAATTGGATTTGCAGGTGCCAAATGGGTTCGGGTGTGGCTTGGGTGCGTTGCAGCTGATTCTCTACTTCATCTACCGTGATTCCAAGCCCAGCCCAGATGAGAAGCCCACAAACGATGGGTCCAACATGGAGATGGGCCTGCACAAGGCCCAACTGGACAAGCCGCAAGCCACTGCCAAAGTGGACCGTGATGATCAAGTCTAGACACGTGTCCTTGTGGTCCACAGACGGTGACCGAGCTTTCCTCACCGCCCGGTGTACATTGTGGCTCTCTTCTTGTTTCGAGTTTAAGTTGGTGAATAACCAAGTCACCCCCTCTACTACTATGTTTTAGATTTTTTTTTTTTCTTTTCCTTTTCGTTTTAGCTTTTATTTTCTAGTGGATTAAGAGTGGACAAGACGACATGTCGTTCTGCACCCCAAAACAAAAATGATAGAAGAGAAACGACGTGTTTCCATCTTGTGGTGTTTTTCGCTTTTTGGAAAAAAAAAAGAGAAAAAGAAAAAAAAAAAAAAA ACTAAATTCACTTATCAATTCATTTCTCTCTTTCTATATAAACTCCTCCCCCCTCCCTCCTCTTCCCCTTCTTCTATACGGTGCCGTTCTGATTCCGGCGTTTCTCATTTCCCATTGCTTCAAACTAATTTCATTCTTCACCCGCTACTGAAAATACACTCTTCATTTCTCTTTGAAATGGATATTCCGCACTTCTTGTTCGGAGTTCTTGGAAATGCTACTGCTCTGTTTCTATTCTTGTCGCCAATGATTACTTTCAAAAGAATCATAAGAAGCAAATCGACGGAGCAATTCTCTGGCATTCCATATGTTATGACGATGCTGAATTGCCTTTTATCCGCTTGGTATGGATTACCGTTTGTGTCGCCACATAATATACTGGTATCGACGATAAACGGAACAGGGGCGGCGATAGAGATAATTTACGTGATGATTTTCATAATCTACGCGCCGAAGAAGGAGAAGGGGAAAATCGGAGGATTGTTTACATTTGCGATGGGAGCTTTCGCGGCGGTGGCTTTGGTGTCGGTCTTTGCGTTGCAAGGCAAAAACAGAAAGCTCTTCTGCGGCTTGGCTGCCTCGGTTTTTTCCATCATCATGTACGGCTCCCCACTCTCCATAATGAGAACAGTGATAAAGACGAAGAGTGTGGAGTTTATGCCATTTTTCCTGTCGTTGTTCGTGTTCTTGTGTGGCACATCTTGGTTCATATATGGCCTTCTTGGCCGCGACCCTTTTGTTGCTTTTTTTACTCTTACGATAAGATCCAATGAGTATGCATGCGAGAAATTGGATGAGGTTGTTGGGAAGAGGGTGCCAAATGGGTTCGGGTGTGGCTTGGGTGCGTTGCAGCTGATTCTCTACTTCATCTACCGTGATTCCAAGCCCAGCCCAGATGAGAAGCCCACAAACGATGGGTCCAACATGGAGATGGGCCTGCACAAGGCCCAACTGGACAAGCCGCAAGCCACTGCCAAAGTGGACCGTGATGATCAAGTCTAGACACGTGTCCTTGTGGTCCACAGACGGTGACCGAGCTTTCCTCACCGCCCGGTGTACATTGTGGCTCTCTTCTTGTTTCGAGTTTAAGTTGGTGAATAACCAAGTCACCCCCTCTACTACTATGTTTTAGATTTTTTTTTTTTCTTTTCCTTTTCGTTTTAGCTTTTATTTTCTAGTGGATTAAGAGTGGACAAGACGACATGTCGTTCTGCACCCCAAAACAAAAATGATAGAAGAGAAACGACGTGTTTCCATCTTGTGGTGTTTTTCGCTTTTTGGAAAAAAAAAAGAGAAAAAGAAAAAAAAAAAAAAA ATGGATATTCCGCACTTCTTGTTCGGAGTTCTTGGAAATGCTACTGCTCTGTTTCTATTCTTGTCGCCAATGATTACTTTCAAAAGAATCATAAGAAGCAAATCGACGGAGCAATTCTCTGGCATTCCATATGTTATGACGATGCTGAATTGCCTTTTATCCGCTTGGTATGGATTACCGTTTGTGTCGCCACATAATATACTGGTATCGACGATAAACGGAACAGGGGCGGCGATAGAGATAATTTACGTGATGATTTTCATAATCTACGCGCCGAAGAAGGAGAAGGGGAAAATCGGAGGATTGTTTACATTTGCGATGGGAGCTTTCGCGGCGGTGGCTTTGGTGTCGGTCTTTGCGTTGCAAGGCAAAAACAGAAAGCTCTTCTGCGGCTTGGCTGCCTCGGTTTTTTCCATCATCATGTACGGCTCCCCACTCTCCATAATGAGAACAGTGATAAAGACGAAGAGTGTGGAGTTTATGCCATTTTTCCTGTCGTTGTTCGTGTTCTTGTGTGGCACATCTTGGTTCATATATGGCCTTCTTGGCCGCGACCCTTTTGTTGCTTTTTTTACTCTTACGATAAGATCCAATGAGTATGCATGCGAGAAATTGGATGAGGTTGTTGGGAAGAGGGTGCCAAATGGGTTCGGGTGTGGCTTGGGTGCGTTGCAGCTGATTCTCTACTTCATCTACCGTGATTCCAAGCCCAGCCCAGATGAGAAGCCCACAAACGATGGGTCCAACATGGAGATGGGCCTGCACAAGGCCCAACTGGACAAGCCGCAAGCCACTGCCAAAGTGGACCGTGATGATCAAGTCTAG MDIPHFLFGVLGNATALFLFLSPMITFKRIIRSKSTEQFSGIPYVMTMLNCLLSAWYGLPFVSPHNILVSTINGTGAAIEIIYVMIFIIYAPKKEKGKIGGLFTFAMGAFAAVALVSVFALQGKNRKLFCGLAASVFSIIMYGSPLSIMRTVIKTKSVEFMPFFLSLFVFLCGTSWFIYGLLGRDPFVAFFTLTIRSNEYACEKLDEVVGKRVPNGFGCGLGALQLILYFIYRDSKPSPDEKPTNDGSNMEMGLHKAQLDKPQATAKVDRDDQV Homology
BLAST of Clc08G06270 vs. NCBI nr
Match: XP_038884026.1 (bidirectional sugar transporter SWEET1 [Benincasa hispida]) HSP 1 Score: 476.1 bits (1224), Expect = 2.0e-130 Identity = 245/274 (89.42%), Postives = 249/274 (90.88%), Query Frame = 0
BLAST of Clc08G06270 vs. NCBI nr
Match: XP_004150723.1 (bidirectional sugar transporter SWEET1 [Cucumis sativus] >AYU71046.1 bidirectional sugar transporter [Cucumis sativus]) HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-123 Identity = 234/275 (85.09%), Postives = 242/275 (88.00%), Query Frame = 0
BLAST of Clc08G06270 vs. NCBI nr
Match: XP_008441563.1 (PREDICTED: bidirectional sugar transporter SWEET1 [Cucumis melo] >XP_016899392.1 PREDICTED: bidirectional sugar transporter SWEET1 [Cucumis melo] >KAA0058861.1 bidirectional sugar transporter SWEET1 [Cucumis melo var. makuwa] >TYK23760.1 bidirectional sugar transporter SWEET1 [Cucumis melo var. makuwa]) HSP 1 Score: 446.4 bits (1147), Expect = 1.7e-121 Identity = 232/275 (84.36%), Postives = 239/275 (86.91%), Query Frame = 0
BLAST of Clc08G06270 vs. NCBI nr
Match: XP_022938466.1 (bidirectional sugar transporter SWEET1-like [Cucurbita moschata] >XP_022993919.1 bidirectional sugar transporter SWEET1-like [Cucurbita maxima] >XP_023549704.1 bidirectional sugar transporter SWEET1-like [Cucurbita pepo subsp. pepo] >KAG6578920.1 Bidirectional sugar transporter SWEET1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016442.1 Bidirectional sugar transporter SWEET1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.5 bits (1129), Expect = 2.1e-119 Identity = 228/273 (83.52%), Postives = 237/273 (86.81%), Query Frame = 0
BLAST of Clc08G06270 vs. NCBI nr
Match: XP_022141554.1 (bidirectional sugar transporter SWEET1 [Momordica charantia]) HSP 1 Score: 421.0 bits (1081), Expect = 7.8e-114 Identity = 218/274 (79.56%), Postives = 236/274 (86.13%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy Swiss-Prot
Match: Q8L9J7 (Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana OX=3702 GN=SWEET1 PE=1 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 3.7e-90 Identity = 171/252 (67.86%), Postives = 192/252 (76.19%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy Swiss-Prot
Match: Q8RZQ8 (Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET1A PE=2 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.6e-75 Identity = 148/234 (63.25%), Postives = 171/234 (73.08%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy Swiss-Prot
Match: P0DKJ3 (Bidirectional sugar transporter SWEET1a OS=Sorghum bicolor OX=4558 GN=SWEET1A PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 3.7e-74 Identity = 147/235 (62.55%), Postives = 173/235 (73.62%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy Swiss-Prot
Match: B8AYH1 (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET1B PE=3 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.6e-72 Identity = 147/236 (62.29%), Postives = 171/236 (72.46%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy Swiss-Prot
Match: Q60EC2 (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET1B PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.5e-72 Identity = 146/236 (61.86%), Postives = 171/236 (72.46%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy TrEMBL
Match: A0A0A0KFB0 (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=SWEET1 PE=2 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 5.3e-124 Identity = 234/275 (85.09%), Postives = 242/275 (88.00%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy TrEMBL
Match: A0A1S3B3R4 (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103485655 PE=3 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 8.4e-122 Identity = 232/275 (84.36%), Postives = 239/275 (86.91%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy TrEMBL
Match: A0A5A7UZE0 (Bidirectional sugar transporter SWEET OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00810 PE=3 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 8.4e-122 Identity = 232/275 (84.36%), Postives = 239/275 (86.91%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy TrEMBL
Match: A0A6J1K1H1 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111489773 PE=3 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 1.0e-119 Identity = 228/273 (83.52%), Postives = 237/273 (86.81%), Query Frame = 0
BLAST of Clc08G06270 vs. ExPASy TrEMBL
Match: A0A6J1FD84 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111444695 PE=3 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 1.0e-119 Identity = 228/273 (83.52%), Postives = 237/273 (86.81%), Query Frame = 0
BLAST of Clc08G06270 vs. TAIR 10
Match: AT1G21460.1 (Nodulin MtN3 family protein ) HSP 1 Score: 332.8 bits (852), Expect = 2.6e-91 Identity = 171/252 (67.86%), Postives = 192/252 (76.19%), Query Frame = 0
BLAST of Clc08G06270 vs. TAIR 10
Match: AT5G53190.1 (Nodulin MtN3 family protein ) HSP 1 Score: 179.1 bits (453), Expect = 4.8e-45 Identity = 99/231 (42.86%), Postives = 131/231 (56.71%), Query Frame = 0
BLAST of Clc08G06270 vs. TAIR 10
Match: AT4G10850.1 (Nodulin MtN3 family protein ) HSP 1 Score: 176.8 bits (447), Expect = 2.4e-44 Identity = 102/231 (44.16%), Postives = 136/231 (58.87%), Query Frame = 0
BLAST of Clc08G06270 vs. TAIR 10
Match: AT1G66770.1 (Nodulin MtN3 family protein ) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41 Identity = 99/254 (38.98%), Postives = 141/254 (55.51%), Query Frame = 0
BLAST of Clc08G06270 vs. TAIR 10
Match: AT3G14770.1 (Nodulin MtN3 family protein ) HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41 Identity = 91/234 (38.89%), Postives = 126/234 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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