Clc08G06180 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G06180
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain-containing protein
LocationClcChr08: 17592520 .. 17596209 (+)
RNA-Seq ExpressionClc08G06180
SyntenyClc08G06180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGTAAAGAAAACTTGAGGACTGAAGACTTGAACTTGTGCTTTGAGAAACTAATGATGCTGGTTGGTGGCGGTGATGGAATGGATGTTGGCGCTAAAGGAGTTAAAATGGATGGTGGAGTGATAGCAGGATGGAAGGACATTCCTATGGAGCTTCTCTTGCAAATTGTTTCACTTGTTGATGATCGAACTGTTATTGTAGCCTCAGGCGTGTGTCGTGGATGGAGAGATGCTATTTGTTTTGGCCTCATCCATCTTTCCCTCTCATGGTACTTCTTCTGACTTGCTTTGGAAGCCTTTCGTTTTATTGATCACTTAGCCTCCATTTGATATCTATTTGGTTTGGTTTTTTTCTTTGAAAGTCATTCTTGTTTCCTTGTTTTCTTGTTTTCTCTGAATTTCCTACCATGGCTTTGTCTTTCTCATGTAGAAAACATTTGAATTCTTAGCCAAATTTTAAAAACATACCCAAGCTTTTTGAAACTAAAACATTTGTGGAAAGTAGATAATAGAACAACAATTTCTTACCATGGCTTTGTCTTTCTTAGGTGTCGAAAACATTTCAACTCTTAGCCAAATTTCAAAAGCGAAACACAAATTCCTATGTGGCAACAGTGTTTGCAAGCTTAATTTTTTATCCAACAAGACTTTAACCTCTAATGTGACTATAATTATACTGACTTGTTATTAGTGGGTTCAGAGAGAGAATTTCAAACATTTGTAGTTTCGTCCAGGTTTCTCAGTTGTTGGACGTCTGGTTTATATTGATTTTCTCCTTCTGTTATTGCCTCATATGATATGATATGATGAATTGGACTCCTTCTGGTTTAAGTAGTACGTTATTTTTTAGTGCTTATATTACTTATTTCCTCGAGTAATCACAAAAATTCTAAGAAGGGTTGGGCGGATGGGAAGGGAGATAGTTGGTATTGATTCATATGTTCCTCTCCCTCAGTCTTTGATCATTGGTCTCTTTCCAATTTTTCAATGAATAGTTTTGTTTCCTTTTCAATCTATATGCCTTCGATTTTACATGTTTAAAAATAAATCACTGTTATTATTGCAAACAGGGAAACTTGGGTTTTGATATTGTCCCCAATCATAAATTTTGGCCCACATATTATTTAAGTCTCGTTTGTGTACTATTGCATCCTAGTCCGTCTAAAGGTGATAGGATAAGCTAGCAAGAAGTTATGAAAAACTTCTATTGAAAGCACCTAGTTGTATCTCAGATTGAGGTGATCCTGTTTCTCTACTACCTTTTTGAGGTGTCAAGTGAGCAGTAGAGCATTCGTTATTACTTAAGTTTCCCTGTTTTGTGTATAATATATTTGCATGACTCTTTATTAAGTGAAGATTGTTACCATTCCATAATTGTCGAATACTACCTATAAGTTCTCCCATTGCTATGTGATAACTCTGCTTTTGGAGGGTAACTTATAAATTATATACATATCAGGAACGGTGCAAGCTTGATTTTTCTAGCTACAAACTTATGACTGTTATTTTGTAAGTATAGCTTCAACATTTACTTTTAGACATTTATTTAATGAATGACCTGCTGCTTGTACCAAAAAGAATAAAAACATTCACTTCTAGACATTTATATGTCTGTTATTTTGATGTTATGTAGGCCACACCACATTAATTAAGCTCTTGTACCCTTGACTGGTGTCATGCTAACTCAAGTACATCATTATTATTCTATGCATTTAAATGATCAGCTTAGAACTAGTTGGAGGTATTTTAATAGTGATTTTTTTTTTACCAAGATATATGCTTGGCAAGGGAAGTTGTTCAGTAGCCTCTGCTTTAATTGAAATGGAGCGTAAGACAGATGGGATATCTTTGATGACATGAAAATGAATAGACACCTTAGTTAATTGCTAGTTGGTGTCCCTTTTTTATTCAGGTGCAAAAAGAACATGAACAATTTGGTCCTATCCCTTGCTCCTAAATTTGCAAGACTGCAAACTCTAATCTTGCGCCAGGATAAACCCCAGCTTGCAGACGATGCTGTTGAGACAATTTCTAGTAACTGTCATGATCTGCAGGTCCTGGACTTGAGCAAAAGTTTTAAGCTGAGTGATCTTTCCCTATATGCCCTGGCTCATGGTTGCCGCGACCTTAAAAAACTTAATATTAGTGGTTGTACTGCATTCAGCGACACGGCACTGGCTTATCTCGCCAGGTATTGTGGAAAGCTAAAAGTTCTTAATCTTTGTGGATGTGTCAAGGCTGCATCTGACACTGCATTGCAGGTACAAACTTCAGATTAAGGATTTTAGCTTGTTTGAAGATGATTAGTGTAATTAAAATTTTCGTCTATGGGCAGGCTATCGGACAATACTGTAATCATTTGCAGTCTGTAAATCTTGGATGGTGTGAAAATGTGAGTGATGTGGGTGTGATGAGTTTGGCGTATGGATGTCCCGATCTTCGAACACTAGACTTGTGTGGCTGTGTCCTAATTACAGGTACATCTCAACTCAATCAATAAATTTATATTTAGTAACTAAAAGATCATTGATGCTTCATATTTGGTCTGAGTGCAGCTGTCTGATTCATGAAATTCTTCTGGAGGCACTATTAACGAATAAGCTTAGTATAGTACAGATATCAACTAGTCAAATCACCCCTTATTCATGGTCCTCCAGAAAGGAGTAATTATTGTTAACCTCAAATATCCTTCACTCACTTCCTATCCTTCCATCTCCGATTGCTATTAAATCTGTGGTCCTTGTTTTACACCAACAATGCCAATTGTTATTGCCAAGCAAAGGCCTTTACTCCATGAAGATGATGGATCGAAAGAAACTCAATGTTACCACTTATTTGATGAAGGGGGAAATAAGATTCTAAGAGTGGCAGCCTAGGATATCCTTGGATAGAATCTCCTTTAAGAATCAAAATCATCCCTTGTTCTAAAACCCTTAACCACCTCTTTTTAAAAAAACTGCTTGTTTCCAGGGAGAGGCCTTTTTCCATAACTCAACTACACTTTTGTCTTAGATATGAGAAAGATCCTTTAAACTATGCGAAGTCCCTAAGATTCCTTCCATCTCTTCAGAGTTTCCTCTTCCATAGGTGAGAGCAAATGAAAGGTCTTTCATAGTAAGATCTGTTTGTGTGGTAAGAAGAGCCGTCTCGACTCTCATCAGAAAATTCTTTATGCTGGTGTTTTCTTCATCTCTCAAATTGTTGTTGAACTTCCTTATGGCTGATGAGAAGGATGATTCTATATTTTTTGAACAATGGTTAGTACTAAGTTACAATAGTATAGCTGAATGGTTTGATCCTTTTTCCTCATCTGCAGATGATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTTGGCCTCTACTATTGTCAAAACATAACGGACAGAGCAATGTATTCTTTGGCACATAGCTGTATAAAGAACAAACCTACAAAATGGGGAACAGGGAAGGGCAAGAATGATGATGATGGACTTCGAACTCTTAACATAAGCCAATGCACAGCTCTTACTCCCCCGGCGGTTCAGGCAGTTTGCGATTCATTTCCTGCTCTCCACACCTGCTCGGGTCGCCATTCTCTCATCATGAGTGGCTGTCTAAATTTGATGTCTGTGCATTGTGCTTGTGCAGTCCAAGCTCACCGTACTCCAACTGTTTTTCCTCATTCAGCTCATTGA

mRNA sequence

ATGGTTGGTAAAGAAAACTTGAGGACTGAAGACTTGAACTTGTGCTTTGAGAAACTAATGATGCTGGTTGGTGGCGGTGATGGAATGGATGTTGGCGCTAAAGGAGTTAAAATGGATGGTGGAGTGATAGCAGGATGGAAGGACATTCCTATGGAGCTTCTCTTGCAAATTGTTTCACTTGTTGATGATCGAACTGTTATTGTAGCCTCAGGCGTGTGTCGTGGATGGAGAGATGCTATTTGTTTTGGCCTCATCCATCTTTCCCTCTCATGGTGCAAAAAGAACATGAACAATTTGGTCCTATCCCTTGCTCCTAAATTTGCAAGACTGCAAACTCTAATCTTGCGCCAGGATAAACCCCAGCTTGCAGACGATGCTGTTGAGACAATTTCTAGTAACTGTCATGATCTGCAGGTCCTGGACTTGAGCAAAAGTTTTAAGCTGAGTGATCTTTCCCTATATGCCCTGGCTCATGGTTGCCGCGACCTTAAAAAACTTAATATTAGTGGTTGTACTGCATTCAGCGACACGGCACTGGCTTATCTCGCCAGGTATTGTGGAAAGCTAAAAGTTCTTAATCTTTGTGGATGTGTCAAGGCTGCATCTGACACTGCATTGCAGGCTATCGGACAATACTGTAATCATTTGCAGTCTGTAAATCTTGGATGGTGTGAAAATGTGAGTGATGTGGGTGTGATGAGTTTGGCGTATGGATGTCCCGATCTTCGAACACTAGACTTGTGTGGCTGTGTCCTAATTACAGATGATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTTGGCCTCTACTATTGTCAAAACATAACGGACAGAGCAATGTATTCTTTGGCACATAGCTGTATAAAGAACAAACCTACAAAATGGGGAACAGGGAAGGGCAAGAATGATGATGATGGACTTCGAACTCTTAACATAAGCCAATGCACAGCTCTTACTCCCCCGGCGGTTCAGGCAGTTTGCGATTCATTTCCTGCTCTCCACACCTGCTCGGGTCGCCATTCTCTCATCATGAGTGGCTGTCTAAATTTGATGTCTGTGCATTGTGCTTGTGCAGTCCAAGCTCACCGTACTCCAACTGTTTTTCCTCATTCAGCTCATTGA

Coding sequence (CDS)

ATGGTTGGTAAAGAAAACTTGAGGACTGAAGACTTGAACTTGTGCTTTGAGAAACTAATGATGCTGGTTGGTGGCGGTGATGGAATGGATGTTGGCGCTAAAGGAGTTAAAATGGATGGTGGAGTGATAGCAGGATGGAAGGACATTCCTATGGAGCTTCTCTTGCAAATTGTTTCACTTGTTGATGATCGAACTGTTATTGTAGCCTCAGGCGTGTGTCGTGGATGGAGAGATGCTATTTGTTTTGGCCTCATCCATCTTTCCCTCTCATGGTGCAAAAAGAACATGAACAATTTGGTCCTATCCCTTGCTCCTAAATTTGCAAGACTGCAAACTCTAATCTTGCGCCAGGATAAACCCCAGCTTGCAGACGATGCTGTTGAGACAATTTCTAGTAACTGTCATGATCTGCAGGTCCTGGACTTGAGCAAAAGTTTTAAGCTGAGTGATCTTTCCCTATATGCCCTGGCTCATGGTTGCCGCGACCTTAAAAAACTTAATATTAGTGGTTGTACTGCATTCAGCGACACGGCACTGGCTTATCTCGCCAGGTATTGTGGAAAGCTAAAAGTTCTTAATCTTTGTGGATGTGTCAAGGCTGCATCTGACACTGCATTGCAGGCTATCGGACAATACTGTAATCATTTGCAGTCTGTAAATCTTGGATGGTGTGAAAATGTGAGTGATGTGGGTGTGATGAGTTTGGCGTATGGATGTCCCGATCTTCGAACACTAGACTTGTGTGGCTGTGTCCTAATTACAGATGATAGTGTGATTGCTTTGGCAAATATGTGCCCTCATCTGAGGTCCCTTGGCCTCTACTATTGTCAAAACATAACGGACAGAGCAATGTATTCTTTGGCACATAGCTGTATAAAGAACAAACCTACAAAATGGGGAACAGGGAAGGGCAAGAATGATGATGATGGACTTCGAACTCTTAACATAAGCCAATGCACAGCTCTTACTCCCCCGGCGGTTCAGGCAGTTTGCGATTCATTTCCTGCTCTCCACACCTGCTCGGGTCGCCATTCTCTCATCATGAGTGGCTGTCTAAATTTGATGTCTGTGCATTGTGCTTGTGCAGTCCAAGCTCACCGTACTCCAACTGTTTTTCCTCATTCAGCTCATTGA

Protein sequence

MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGTGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAVQAHRTPTVFPHSAH
Homology
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BLAST of Clc08G06180 vs. NCBI nr
Match: XP_038884756.1 (F-box protein SKP2A isoform X1 [Benincasa hispida])

HSP 1 Score: 753.8 bits (1945), Expect = 7.0e-214
Identity = 361/377 (95.76%), Postives = 369/377 (97.88%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEKLMM+VGGGDGMDVGAKGVKMDGG+IAGWKDIPMELLLQIVSL
Sbjct: 1   MVGKENLRTEDLNLCFEKLMMVVGGGDGMDVGAKGVKMDGGLIAGWKDIPMELLLQIVSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGL+HLSLSWCKKNMNNLVLSLAPKFA+LQTLILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLVHLSLSWCKKNMNNLVLSLAPKFAKLQTLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QLADDAVETI+S CHDLQ LDLSKSFKLSDLSLYALAHGC DLK+LN+SGCTAFSDTALA
Sbjct: 121 QLADDAVETIASYCHDLQALDLSKSFKLSDLSLYALAHGCHDLKRLNVSGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSC KNKPTKWG
Sbjct: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCRKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360

Query: 361 CAVQAHRTPTVFPHSAH 378
           CA+QAHR PT FPHSAH
Sbjct: 361 CAIQAHRAPTAFPHSAH 377

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BLAST of Clc08G06180 vs. NCBI nr
Match: XP_008441569.1 (PREDICTED: F-box protein SKP2A isoform X1 [Cucumis melo] >XP_016899427.1 PREDICTED: F-box protein SKP2A isoform X1 [Cucumis melo])

HSP 1 Score: 740.0 bits (1909), Expect = 1.0e-209
Identity = 359/377 (95.23%), Postives = 365/377 (96.82%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEKLMMLV GGDGMDVGA+GVKMDGGVIAGWKDIPMELLLQIVSL
Sbjct: 1   MVGKENLRTEDLNLCFEKLMMLV-GGDGMDVGARGVKMDGGVIAGWKDIPMELLLQIVSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKF +LQ LILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFGKLQNLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QL+D AVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGC DLK+LNISGCTAFSDTALA
Sbjct: 121 QLSDHAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCHDLKRLNISGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLK LNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENV+DVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKFLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Sbjct: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360

Query: 361 CAVQAHRTPTVFPHSAH 378
           CAVQAHR  T FPHSAH
Sbjct: 361 CAVQAHRASTAFPHSAH 376

[Close]
BLAST of Clc08G06180 vs. NCBI nr
Match: XP_004144256.1 (F-box protein SKP2A isoform X1 [Cucumis sativus] >KGN47499.1 hypothetical protein Csa_018924 [Cucumis sativus])

HSP 1 Score: 730.3 bits (1884), Expect = 8.3e-207
Identity = 355/377 (94.16%), Postives = 363/377 (96.29%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEK MMLV  GDGMDVGAKGV+MDGGV+AGWKDIPMELLLQI+SL
Sbjct: 1   MVGKENLRTEDLNLCFEKPMMLV-AGDGMDVGAKGVQMDGGVLAGWKDIPMELLLQILSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGL HLSLSWC+KNMNNLVLSLAPKFARLQ LILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLAHLSLSWCQKNMNNLVLSLAPKFARLQNLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QL DDAVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGCRDLK+LNISGCTAFSDTALA
Sbjct: 121 QLGDDAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKRLNISGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENV+DVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLR LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Sbjct: 241 DLRILDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNL+SVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLISVHCA 360

Query: 361 CAVQAHRTPTVFPHSAH 378
           CAVQAHR  T F HSAH
Sbjct: 361 CAVQAHRAATAFLHSAH 376

[Close]
BLAST of Clc08G06180 vs. NCBI nr
Match: TYK23778.1 (F-box protein SKP2A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 726.1 bits (1873), Expect = 1.6e-205
Identity = 353/373 (94.64%), Postives = 359/373 (96.25%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEKLMMLV GGDGMDVGA+GVKMDGGVIAGWKDIPMELLLQIVSL
Sbjct: 1   MVGKENLRTEDLNLCFEKLMMLV-GGDGMDVGARGVKMDGGVIAGWKDIPMELLLQIVSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKF +LQ LILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFGKLQNLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QL+D AVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGC DLK+LNISGCTAFSDTALA
Sbjct: 121 QLSDHAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCHDLKRLNISGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLK LNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENV+DVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKFLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Sbjct: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360

Query: 361 CAVQAHRTPTVFP 374
           CAVQAHR     P
Sbjct: 361 CAVQAHRLELTLP 372

[Close]
BLAST of Clc08G06180 vs. NCBI nr
Match: XP_022141464.1 (F-box protein SKP2A-like isoform X1 [Momordica charantia] >XP_022141465.1 F-box protein SKP2A-like isoform X1 [Momordica charantia] >XP_022141466.1 F-box protein SKP2A-like isoform X1 [Momordica charantia])

HSP 1 Score: 724.5 bits (1869), Expect = 4.5e-205
Identity = 349/376 (92.82%), Postives = 358/376 (95.21%), Query Frame = 0 

Query: 2   VGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSLV 61
           +GKE LR EDLNLCFEKLMM+ GGGDG+DVGAKGVKM+GGV+AGWKDIPMELLLQIVSLV
Sbjct: 4   IGKEILRNEDLNLCFEKLMMVAGGGDGIDVGAKGVKMEGGVVAGWKDIPMELLLQIVSLV 63

Query: 62  DDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQ 121
           DDRTVIVASGVCRGWRDAIC GLIHLS SWCKKNMNNLVLSLAPKF +LQTLILRQDKPQ
Sbjct: 64  DDRTVIVASGVCRGWRDAICLGLIHLSFSWCKKNMNNLVLSLAPKFGKLQTLILRQDKPQ 123

Query: 122 LADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAY 181
           LADDAVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGC+AFSDTALAY
Sbjct: 124 LADDAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCSAFSDTALAY 183

Query: 182 LARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPD 241
           LA YC KLKVLNLCGCVKAASDTALQAIG YCN LQSVNLGWCENVSDVGVMSLAYGCPD
Sbjct: 184 LASYCRKLKVLNLCGCVKAASDTALQAIGHYCNLLQSVNLGWCENVSDVGVMSLAYGCPD 243

Query: 242 LRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGT 301
           LR LDLCGCVLITDDSVIAL+NMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 
Sbjct: 244 LRILDLCGCVLITDDSVIALSNMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGP 303

Query: 302 GKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCAC 361
           GKG NDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCAC
Sbjct: 304 GKGMNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCAC 363

Query: 362 AVQAHRTPTVFPHSAH 378
           AVQAHR PT F H AH
Sbjct: 364 AVQAHRAPTAFAHPAH 379

[Close]
BLAST of Clc08G06180 vs. ExPASy Swiss-Prot
Match: O49286 (F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 8.5e-154
Identity = 262/374 (70.05%), Postives = 308/374 (82.35%), Query Frame = 0 

Query: 5   ENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSLVDDR 64
           E    ++LNLCFE +                 KM+G +I+ WKDIP+ELL++I++LVDDR
Sbjct: 4   EGATRKELNLCFENM-----------------KMEGVLISEWKDIPVELLMKILNLVDDR 63

Query: 65  TVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLAD 124
           TVI+AS +C GWRDA+  GL  LSLSWCKKNMN+LVLSLAPKF +LQTL+LRQDKPQL D
Sbjct: 64  TVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLED 123

Query: 125 DAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLAR 184
           +AVE I+++CH+LQ LDLSKS K++D SLY+LA GC +L KLN+SGCT+FSDTALA+L R
Sbjct: 124 NAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTR 183

Query: 185 YCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRT 244
           +C KLK+LNLCGCV+A SD  LQAIG+ CN LQS+NLGWCEN+SD GVMSLAYGCPDLRT
Sbjct: 184 FCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRT 243

Query: 245 LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GTGK 304
           LDLC CVLITD+SV+ALAN C HLRSLGLYYC+NITDRAMYSLA S +KNK   W    K
Sbjct: 244 LDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKK 303

Query: 305 GKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAV 364
           GK D++GLR+LNISQCT LTP AVQAVCD+FPALHTCSGRHSL+MSGCLNL SVHCAC +
Sbjct: 304 GKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLQSVHCACIL 360

Query: 365 QAHRTPTVFPHSAH 378
           QAHRT TV+PH AH
Sbjct: 364 QAHRTHTVYPHPAH 360

[Close]
BLAST of Clc08G06180 vs. ExPASy Swiss-Prot
Match: Q9LPL4 (F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 4.2e-153
Identity = 262/360 (72.78%), Postives = 302/360 (83.89%), Query Frame = 0 

Query: 21  MLVGGGDGMDVGA--KGVKMDGGVIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRD 80
           M++GG   M++    + +KM+G  I  WKDIP+ELL++I+SLVDDR VIVASGVC GWRD
Sbjct: 1   MVMGGEASMELDQCFQKMKMEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCTGWRD 60

Query: 81  AICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHDLQ 140
           AI FGL  L LSWC  NMN+LVLSL PKF +LQTL LRQDKPQL D+AVE I+++CH+LQ
Sbjct: 61  AISFGLTRLRLSWCNNNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQ 120

Query: 141 VLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLARYCGKLKVLNLCGCV 200
            LDLSKS K++D SLYALAHGC DL KLN+SGCT+FSDTA+AYL R+C KLKVLNLCGCV
Sbjct: 121 ELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCV 180

Query: 201 KAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSV 260
           KA +D AL+AIG  CN +QS+NLGWCEN+SD GVMSLAYGCPDLRTLDLCGCVLITD+SV
Sbjct: 181 KAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESV 240

Query: 261 IALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GTGKGKNDDDGLRTLNIS 320
           +ALA+ C HLRSLGLYYC+NITDRAMYSLA S +KNKP  W    KGK D++GLR+LNIS
Sbjct: 241 VALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNIS 300

Query: 321 QCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAVQAHRTPTVFPHSAH 378
           QCTALTP AVQAVCDSFPALHTCSGRHSL+MSGCLNL +VHCAC +QAHR     PH AH
Sbjct: 301 QCTALTPSAVQAVCDSFPALHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH 360

[Close]
BLAST of Clc08G06180 vs. ExPASy Swiss-Prot
Match: A6H779 (F-box/LRR-repeat protein 2 OS=Bos taurus OX=9913 GN=FBXL2 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.8e-29
Identity = 90/315 (28.57%), Postives = 146/315 (46.35%), Query Frame = 0 

Query: 47  KDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPK 106
           K +P ELLL+I S +D  T+   + + + W                          LA  
Sbjct: 13  KKLPKELLLRIFSFLDIVTLCRCAQISKAWN------------------------ILALD 72

Query: 107 FARLQTLILRQDKPQLADDAVETISSNCHD-LQVLDLSKSFKLSDLSLYALAHGCRDLKK 166
            +  Q + L   +  +    VE IS  C   L+ L L     + D SL   A  CR+++ 
Sbjct: 73  GSNWQRIDLFNFQTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEH 132

Query: 167 LNISGCTAFSDTALAYLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCE 226
           LN++GCT  +D+    L+R+C KLK L+L  CV + ++++L+ I + C HL+ +NL WC+
Sbjct: 133 LNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCV-SITNSSLKGISEGCRHLEYLNLSWCD 192

Query: 227 NVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMY 286
            ++  GV +L  GC  LR L L GC  + D+++  + N C  L SL L  C  +TD  + 
Sbjct: 193 QITKDGVEALVRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVV 252

Query: 287 SLAHSCIKNKPTKWGTGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTC-SGRH 346
            L   C +                 L+ L +S C +LT  ++ A+  + P L    + R 
Sbjct: 253 QLCRGCPR-----------------LQALCLSGCGSLTDASLTALALNCPRLQILEAARC 285

Query: 347 SLIMSGCLNLMSVHC 360
           S +      L++ +C
Sbjct: 313 SHLTDAGFTLLARNC 285

[Close]
BLAST of Clc08G06180 vs. ExPASy Swiss-Prot
Match: Q8BH16 (F-box/LRR-repeat protein 2 OS=Mus musculus OX=10090 GN=Fbxl2 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.7e-27
Identity = 76/254 (29.92%), Postives = 125/254 (49.21%), Query Frame = 0 

Query: 39  DGGVIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNN 98
           D G+I   K +P ELLL+I S +D  T+   + + + W      G      +W + ++ N
Sbjct: 7   DDGLIN--KKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDG-----SNWQRVDLFN 66

Query: 99  LVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHD-LQVLDLSKSFKLSDLSLYALA 158
                               +  +    VE IS  C   L+ L L     + D SL   A
Sbjct: 67  F-------------------QTDVEGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFA 126

Query: 159 HGCRDLKKLNISGCTAFSDTALAYLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQ 218
             CR+++ LN++GCT  +D+    L+R+C KLK L+L  CV + ++++L+ I + C +L+
Sbjct: 127 QNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCV-SVTNSSLKGISEGCRNLE 186

Query: 219 SVNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQ 278
            +NL WC+ ++  G+ +L  GC  L+ L L GC  + D+++  + N C  L SL L  C 
Sbjct: 187 YLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNHCHELVSLNLQSCS 233

Query: 279 NITDRAMYSLAHSC 292
            ITD  +  +   C
Sbjct: 247 RITDDGVVQICRGC 233

[Close]
BLAST of Clc08G06180 vs. ExPASy Swiss-Prot
Match: Q9CZV8 (F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-26
Identity = 97/346 (28.03%), Postives = 153/346 (44.22%), Query Frame = 0 

Query: 47  KDIPMELLLQIVSLVDDRTVIVASGVCRGWR----------------------------- 106
           K +P ELLL+I S +D  T+   + V R W                              
Sbjct: 26  KKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENI 85

Query: 107 DAICFGLIH-LSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHD 166
              C G +  LSL  C    +N + + A     ++ L L     +  D    ++S  C  
Sbjct: 86  SKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSL-NGCTKTTDATCTSLSKFCSK 145

Query: 167 LQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLARYCGKLKVLNLCG 226
           L+ LDL+    ++++SL AL+ GC  L++LNIS C   +   +  L R CG LK L L G
Sbjct: 146 LRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKG 205

Query: 227 CVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDD 286
           C +   D AL+ IG +C  L ++NL  C  ++D G++++  GC  L++L   GC  ITD 
Sbjct: 206 CTQ-LEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDA 265

Query: 287 SVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGTGKGKNDDDGLRTLNI 346
            + AL   CP LR L +  C  +TD    +LA +C +                 L  +++
Sbjct: 266 ILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHE-----------------LEKMDL 325

Query: 347 SQCTALTPPAVQAVCDSFPALHTCSGRHSLIMS--GCLNLMSVHCA 361
            +C  +T   +  +    P L   S  H  +++  G  +L +  CA
Sbjct: 326 EECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACA 352

[Close]
BLAST of Clc08G06180 vs. ExPASy TrEMBL
Match: A0A1S3B3Q3 (F-box protein SKP2A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485661 PE=4 SV=1)

HSP 1 Score: 740.0 bits (1909), Expect = 5.1e-210
Identity = 359/377 (95.23%), Postives = 365/377 (96.82%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEKLMMLV GGDGMDVGA+GVKMDGGVIAGWKDIPMELLLQIVSL
Sbjct: 1   MVGKENLRTEDLNLCFEKLMMLV-GGDGMDVGARGVKMDGGVIAGWKDIPMELLLQIVSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKF +LQ LILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFGKLQNLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QL+D AVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGC DLK+LNISGCTAFSDTALA
Sbjct: 121 QLSDHAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCHDLKRLNISGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLK LNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENV+DVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKFLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Sbjct: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360

Query: 361 CAVQAHRTPTVFPHSAH 378
           CAVQAHR  T FPHSAH
Sbjct: 361 CAVQAHRASTAFPHSAH 376

[Close]
BLAST of Clc08G06180 vs. ExPASy TrEMBL
Match: A0A0A0KFD6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G344280 PE=4 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 4.0e-207
Identity = 355/377 (94.16%), Postives = 363/377 (96.29%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEK MMLV  GDGMDVGAKGV+MDGGV+AGWKDIPMELLLQI+SL
Sbjct: 1   MVGKENLRTEDLNLCFEKPMMLV-AGDGMDVGAKGVQMDGGVLAGWKDIPMELLLQILSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGL HLSLSWC+KNMNNLVLSLAPKFARLQ LILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLAHLSLSWCQKNMNNLVLSLAPKFARLQNLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QL DDAVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGCRDLK+LNISGCTAFSDTALA
Sbjct: 121 QLGDDAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKRLNISGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENV+DVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLR LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Sbjct: 241 DLRILDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNL+SVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLISVHCA 360

Query: 361 CAVQAHRTPTVFPHSAH 378
           CAVQAHR  T F HSAH
Sbjct: 361 CAVQAHRAATAFLHSAH 376

[Close]
BLAST of Clc08G06180 vs. ExPASy TrEMBL
Match: A0A5D3DJV0 (F-box protein SKP2A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001030 PE=4 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 7.6e-206
Identity = 353/373 (94.64%), Postives = 359/373 (96.25%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSL 60
           MVGKENLRTEDLNLCFEKLMMLV GGDGMDVGA+GVKMDGGVIAGWKDIPMELLLQIVSL
Sbjct: 1   MVGKENLRTEDLNLCFEKLMMLV-GGDGMDVGARGVKMDGGVIAGWKDIPMELLLQIVSL 60

Query: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKP 120
           VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKF +LQ LILRQDKP
Sbjct: 61  VDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFGKLQNLILRQDKP 120

Query: 121 QLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALA 180
           QL+D AVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGC DLK+LNISGCTAFSDTALA
Sbjct: 121 QLSDHAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCHDLKRLNISGCTAFSDTALA 180

Query: 181 YLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCP 240
           YLA YC KLK LNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENV+DVGVMSLAYGCP
Sbjct: 181 YLASYCRKLKFLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMSLAYGCP 240

Query: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300
           DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG
Sbjct: 241 DLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 300

Query: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360
           TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
Sbjct: 301 TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA 360

Query: 361 CAVQAHRTPTVFP 374
           CAVQAHR     P
Sbjct: 361 CAVQAHRLELTLP 372

[Close]
BLAST of Clc08G06180 vs. ExPASy TrEMBL
Match: A0A6J1CIQ6 (F-box protein SKP2A-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011854 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.2e-205
Identity = 349/376 (92.82%), Postives = 358/376 (95.21%), Query Frame = 0 

Query: 2   VGKENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSLV 61
           +GKE LR EDLNLCFEKLMM+ GGGDG+DVGAKGVKM+GGV+AGWKDIPMELLLQIVSLV
Sbjct: 4   IGKEILRNEDLNLCFEKLMMVAGGGDGIDVGAKGVKMEGGVVAGWKDIPMELLLQIVSLV 63

Query: 62  DDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQ 121
           DDRTVIVASGVCRGWRDAIC GLIHLS SWCKKNMNNLVLSLAPKF +LQTLILRQDKPQ
Sbjct: 64  DDRTVIVASGVCRGWRDAICLGLIHLSFSWCKKNMNNLVLSLAPKFGKLQTLILRQDKPQ 123

Query: 122 LADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAY 181
           LADDAVETI+S CHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGC+AFSDTALAY
Sbjct: 124 LADDAVETIASYCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCSAFSDTALAY 183

Query: 182 LARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPD 241
           LA YC KLKVLNLCGCVKAASDTALQAIG YCN LQSVNLGWCENVSDVGVMSLAYGCPD
Sbjct: 184 LASYCRKLKVLNLCGCVKAASDTALQAIGHYCNLLQSVNLGWCENVSDVGVMSLAYGCPD 243

Query: 242 LRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGT 301
           LR LDLCGCVLITDDSVIAL+NMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWG 
Sbjct: 244 LRILDLCGCVLITDDSVIALSNMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGP 303

Query: 302 GKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCAC 361
           GKG NDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCAC
Sbjct: 304 GKGMNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCAC 363

Query: 362 AVQAHRTPTVFPHSAH 378
           AVQAHR PT F H AH
Sbjct: 364 AVQAHRAPTAFAHPAH 379

[Close]
BLAST of Clc08G06180 vs. ExPASy TrEMBL
Match: A0A6J1FF47 (F-box protein SKP2A-like OS=Cucurbita moschata OX=3662 GN=LOC111444899 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 4.2e-204
Identity = 354/379 (93.40%), Postives = 362/379 (95.51%), Query Frame = 0 

Query: 1   MVGKENLRTEDLNLCFEKLMMLV-GGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVS 60
           MVGKENLRTEDLNLCFEKLMMLV GGGDG+DVGAKGVKMDGGVIAGWKDIPMELLLQI+S
Sbjct: 1   MVGKENLRTEDLNLCFEKLMMLVDGGGDGIDVGAKGVKMDGGVIAGWKDIPMELLLQIIS 60

Query: 61  LVDDRTVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDK 120
           LVDDRTVIVASGVC GWRDAICFGL HLSLSWCKKNMNNLVLSLAPKFA+LQTLILRQDK
Sbjct: 61  LVDDRTVIVASGVCCGWRDAICFGLTHLSLSWCKKNMNNLVLSLAPKFAKLQTLILRQDK 120

Query: 121 PQLADDAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTAL 180
           PQLADDAVETI+S CHDLQVLDL KS KLSDLSLYALAHGC DL KLNISGCTAFSDTAL
Sbjct: 121 PQLADDAVETIASYCHDLQVLDLRKSSKLSDLSLYALAHGCPDLVKLNISGCTAFSDTAL 180

Query: 181 AYLARYCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGC 240
           AYLA YC KLKVLNLC CVKAASDTALQAIGQYCN LQSVNLGWCENVSDVGVMSLAYGC
Sbjct: 181 AYLASYCRKLKVLNLCSCVKAASDTALQAIGQYCNSLQSVNLGWCENVSDVGVMSLAYGC 240

Query: 241 PDLRTLDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW 300
            DLRTLDLCGCVLITDDSVIA+ANMCPHLRSLGLYYCQNITDRAMYSLAHSCIK+KPTKW
Sbjct: 241 RDLRTLDLCGCVLITDDSVIAMANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKHKPTKW 300

Query: 301 G-TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVH 360
           G TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVH
Sbjct: 301 GTTGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVH 360

Query: 361 CACAVQAHRTPTVFPHSAH 378
           CACAVQAHR P+ FP+ AH
Sbjct: 361 CACAVQAHRAPSAFPYPAH 379

[Close]
BLAST of Clc08G06180 vs. TAIR 10
Match: AT1G77000.1 (RNI-like superfamily protein )

HSP 1 Score: 544.7 bits (1402), Expect = 6.0e-155
Identity = 262/374 (70.05%), Postives = 308/374 (82.35%), Query Frame = 0 

Query: 5   ENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSLVDDR 64
           E    ++LNLCFE +                 KM+G +I+ WKDIP+ELL++I++LVDDR
Sbjct: 4   EGATRKELNLCFENM-----------------KMEGVLISEWKDIPVELLMKILNLVDDR 63

Query: 65  TVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLAD 124
           TVI+AS +C GWRDA+  GL  LSLSWCKKNMN+LVLSLAPKF +LQTL+LRQDKPQL D
Sbjct: 64  TVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLED 123

Query: 125 DAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLAR 184
           +AVE I+++CH+LQ LDLSKS K++D SLY+LA GC +L KLN+SGCT+FSDTALA+L R
Sbjct: 124 NAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTR 183

Query: 185 YCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRT 244
           +C KLK+LNLCGCV+A SD  LQAIG+ CN LQS+NLGWCEN+SD GVMSLAYGCPDLRT
Sbjct: 184 FCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRT 243

Query: 245 LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GTGK 304
           LDLC CVLITD+SV+ALAN C HLRSLGLYYC+NITDRAMYSLA S +KNK   W    K
Sbjct: 244 LDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKK 303

Query: 305 GKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAV 364
           GK D++GLR+LNISQCT LTP AVQAVCD+FPALHTCSGRHSL+MSGCLNL SVHCAC +
Sbjct: 304 GKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLQSVHCACIL 360

Query: 365 QAHRTPTVFPHSAH 378
           QAHRT TV+PH AH
Sbjct: 364 QAHRTHTVYPHPAH 360

[Close]
BLAST of Clc08G06180 vs. TAIR 10
Match: AT1G77000.2 (RNI-like superfamily protein )

HSP 1 Score: 544.7 bits (1402), Expect = 6.0e-155
Identity = 262/374 (70.05%), Postives = 308/374 (82.35%), Query Frame = 0 

Query: 5   ENLRTEDLNLCFEKLMMLVGGGDGMDVGAKGVKMDGGVIAGWKDIPMELLLQIVSLVDDR 64
           E    ++LNLCFE +                 KM+G +I+ WKDIP+ELL++I++LVDDR
Sbjct: 4   EGATRKELNLCFENM-----------------KMEGVLISEWKDIPVELLMKILNLVDDR 63

Query: 65  TVIVASGVCRGWRDAICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLAD 124
           TVI+AS +C GWRDA+  GL  LSLSWCKKNMN+LVLSLAPKF +LQTL+LRQDKPQL D
Sbjct: 64  TVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLED 123

Query: 125 DAVETISSNCHDLQVLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLAR 184
           +AVE I+++CH+LQ LDLSKS K++D SLY+LA GC +L KLN+SGCT+FSDTALA+L R
Sbjct: 124 NAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTR 183

Query: 185 YCGKLKVLNLCGCVKAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRT 244
           +C KLK+LNLCGCV+A SD  LQAIG+ CN LQS+NLGWCEN+SD GVMSLAYGCPDLRT
Sbjct: 184 FCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRT 243

Query: 245 LDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GTGK 304
           LDLC CVLITD+SV+ALAN C HLRSLGLYYC+NITDRAMYSLA S +KNK   W    K
Sbjct: 244 LDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKK 303

Query: 305 GKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAV 364
           GK D++GLR+LNISQCT LTP AVQAVCD+FPALHTCSGRHSL+MSGCLNL SVHCAC +
Sbjct: 304 GKFDEEGLRSLNISQCTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLQSVHCACIL 360

Query: 365 QAHRTPTVFPHSAH 378
           QAHRT TV+PH AH
Sbjct: 364 QAHRTHTVYPHPAH 360

[Close]
BLAST of Clc08G06180 vs. TAIR 10
Match: AT1G21410.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 542.3 bits (1396), Expect = 3.0e-154
Identity = 262/360 (72.78%), Postives = 302/360 (83.89%), Query Frame = 0 

Query: 21  MLVGGGDGMDVGA--KGVKMDGGVIAGWKDIPMELLLQIVSLVDDRTVIVASGVCRGWRD 80
           M++GG   M++    + +KM+G  I  WKDIP+ELL++I+SLVDDR VIVASGVC GWRD
Sbjct: 1   MVMGGEASMELDQCFQKMKMEGISIKEWKDIPVELLMRILSLVDDRNVIVASGVCTGWRD 60

Query: 81  AICFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHDLQ 140
           AI FGL  L LSWC  NMN+LVLSL PKF +LQTL LRQDKPQL D+AVE I+++CH+LQ
Sbjct: 61  AISFGLTRLRLSWCNNNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQ 120

Query: 141 VLDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLARYCGKLKVLNLCGCV 200
            LDLSKS K++D SLYALAHGC DL KLN+SGCT+FSDTA+AYL R+C KLKVLNLCGCV
Sbjct: 121 ELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCV 180

Query: 201 KAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSV 260
           KA +D AL+AIG  CN +QS+NLGWCEN+SD GVMSLAYGCPDLRTLDLCGCVLITD+SV
Sbjct: 181 KAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESV 240

Query: 261 IALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKW-GTGKGKNDDDGLRTLNIS 320
           +ALA+ C HLRSLGLYYC+NITDRAMYSLA S +KNKP  W    KGK D++GLR+LNIS
Sbjct: 241 VALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNIS 300

Query: 321 QCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCACAVQAHRTPTVFPHSAH 378
           QCTALTP AVQAVCDSFPALHTCSGRHSL+MSGCLNL +VHCAC +QAHR     PH AH
Sbjct: 301 QCTALTPSAVQAVCDSFPALHTCSGRHSLVMSGCLNLTTVHCACILQAHRAHNAVPHPAH 360

[Close]
BLAST of Clc08G06180 vs. TAIR 10
Match: AT5G23340.1 (RNI-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 4.8e-27
Identity = 73/260 (28.08%), Postives = 134/260 (51.54%), Query Frame = 0 

Query: 81  CFGLIH-LSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHDLQV 140
           C  L+  L +S+C+K  +  + ++A     L+ L L   +  + D++++++S  C DL+ 
Sbjct: 122 CLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCR-FITDESLKSLSERCRDLEA 181

Query: 141 LDLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLARYC-GKLKVLNLCGCV 200
           L L     ++D  L  L  GCR +K L+I+ C+   D  ++ +A+ C   LK L L  C 
Sbjct: 182 LGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCY 241

Query: 201 KAASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPD-LRTLDLCGCVLITDDS 260
           K  ++ ++ ++ Q+C +L+++ +G C ++SD  +M LA  C D L+ L +  C+ I+D S
Sbjct: 242 KVGNE-SISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSS 301

Query: 261 VIALANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGTGKGKNDDDGLRTLNIS 320
           +  +   C +L +L +  C+ +TD A   L                G +D  GL+ L +S
Sbjct: 302 LSCILKQCKNLEALDIGCCEEVTDTAFRDL----------------GSDDVLGLKVLKVS 361

Query: 321 QCTALTPPAVQAVCDSFPAL 338
            CT +T   +  + D   +L
Sbjct: 362 NCTKITVTGIGKLLDKCSSL 363

[Close]
BLAST of Clc08G06180 vs. TAIR 10
Match: AT4G15475.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-24
Identity = 72/255 (28.24%), Postives = 119/255 (46.67%), Query Frame = 0 

Query: 81  CFGLIHLSLSWCKKNMNNLVLSLAPKFARLQTLILRQDKPQLADDAVETISSNCHDLQVL 140
           C  L  + ++ C       + ++     RL+ L L   + ++ + A++ I   C  L++L
Sbjct: 345 CKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQ-RIGNSALQEIGKGCKSLEIL 404

Query: 141 DLSKSFKLSDLSLYALAHGCRDLKKLNISGCTAFSDTALAYLARYCGKLKVLNLCGCVKA 200
            L     + D+++ ++A GCR+LKKL+I  C    +  +  + ++C  L  L+L  C K 
Sbjct: 405 HLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDK- 464

Query: 201 ASDTALQAIGQYCNHLQSVNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIA 260
             + AL AIG+ C+ LQ +N+  C  +SD G+ ++A GCP L  LD+     I D  +  
Sbjct: 465 VGNKALIAIGKGCS-LQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAE 524

Query: 261 LANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKNKPTKWGTGKGKNDDDGLRTLNISQCT 320
           L   CP L+ L L +C +ITD  +  L   C                   L T ++  C 
Sbjct: 525 LGEGCPMLKDLVLSHCHHITDNGLNHLVQKC-----------------KLLETCHMVYCP 579

Query: 321 ALTPPAVQAVCDSFP 336
            +T   V  V  S P
Sbjct: 585 GITSAGVATVVSSCP 579

The following BLAST results are available for this feature:
BLAST of Clc08G06180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884756.17.0e-21495.76F-box protein SKP2A isoform X1 [Benincasa hispida][more]
XP_008441569.11.0e-20995.23PREDICTED: F-box protein SKP2A isoform X1 [Cucumis melo] >XP_016899427.1 PREDICT... [more]
XP_004144256.18.3e-20794.16F-box protein SKP2A isoform X1 [Cucumis sativus] >KGN47499.1 hypothetical protei... [more]
TYK23778.11.6e-20594.64F-box protein SKP2A isoform X1 [Cucumis melo var. makuwa][more]
XP_022141464.14.5e-20592.82F-box protein SKP2A-like isoform X1 [Momordica charantia] >XP_022141465.1 F-box ... [more]
BLAST of Clc08G06180 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O492868.5e-15470.05F-box protein SKP2B OS=Arabidopsis thaliana OX=3702 GN=SKP2B PE=1 SV=1[more]
Q9LPL44.2e-15372.78F-box protein SKP2A OS=Arabidopsis thaliana OX=3702 GN=SKP2A PE=1 SV=1[more]
A6H7793.8e-2928.57F-box/LRR-repeat protein 2 OS=Bos taurus OX=9913 GN=FBXL2 PE=2 SV=1[more]
Q8BH164.7e-2729.92F-box/LRR-repeat protein 2 OS=Mus musculus OX=10090 GN=Fbxl2 PE=1 SV=1[more]
Q9CZV81.0e-2628.03F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3[more]
BLAST of Clc08G06180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B3Q35.1e-21095.23F-box protein SKP2A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485661 PE=4 SV=1[more]
A0A0A0KFD64.0e-20794.16F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G344280 PE=4 ... [more]
A0A5D3DJV07.6e-20694.64F-box protein SKP2A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1CIQ62.2e-20592.82F-box protein SKP2A-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110118... [more]
A0A6J1FF474.2e-20493.40F-box protein SKP2A-like OS=Cucurbita moschata OX=3662 GN=LOC111444899 PE=4 SV=1[more]
BLAST of Clc08G06180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G77000.16.0e-15570.05RNI-like superfamily protein [more]
AT1G77000.26.0e-15570.05RNI-like superfamily protein [more]
AT1G21410.13.0e-15472.78F-box/RNI-like superfamily protein [more]
AT5G23340.14.8e-2728.08RNI-like superfamily protein [more]
AT4G15475.14.9e-2428.24F-box/RNI-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 311..333
e-value: 19.0
score: 12.4
coord: 81..106
e-value: 300.0
score: 3.0
coord: 265..290
e-value: 5.7E-8
score: 42.5
coord: 239..264
e-value: 3.0E-6
score: 36.8
coord: 134..159
e-value: 0.022
score: 23.9
coord: 160..185
e-value: 3.2E-5
score: 33.3
coord: 186..212
e-value: 0.79
score: 18.8
coord: 213..238
e-value: 3.6E-6
score: 36.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 81..369
e-value: 1.8E-46
score: 160.5
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 212..236
e-value: 5.2E-4
score: 19.9
coord: 265..288
e-value: 0.98
score: 9.7
coord: 239..262
e-value: 0.25
score: 11.5
IPR001810F-box domainPFAMPF00646F-boxcoord: 46..81
e-value: 1.6E-6
score: 27.8
NoneNo IPR availableGENE3D1.20.1280.50coord: 45..80
e-value: 1.8E-6
score: 29.7
NoneNo IPR availablePANTHERPTHR13318:SF154F-BOX SKP2A-LIKE PROTEINcoord: 1..359
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 1..359
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 80..336
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 46..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G06180.1Clc08G06180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0005515 protein binding