Clc08G05920 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G05920
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	tetratricopeptide repeat protein 33
Location	ClcChr08: 17231510 .. 17235522 (-)
RNA-Seq Expression	Clc08G05920
Synteny	Clc08G05920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGTTTGGGCTTTCAGCCCGACGATGAGATTCGACCCGCTATTGATCGAGAACCTGTCCGTTCGTTCCGAATGCGAAAAAAGTTCTGCCTGTTCGTACAGAGGGTTGGAGACGACGATGAAGCTCACATGGAAGAACAAGGGCAATAGTAAGAAGCGATCTCTCGCAGCAGTTTCAAGCCGTTCAAATCTTCCTTTTGAGGTGCCTATCGAGGTTGAGGAACACGATAGGGCTAATCGCCAAGATAAAGAATTAAACCTTGAGGCGGTAGACCGGAGAGAGGATGGAGCTTCAGACCGTTCGTTTTCAGACCTCAAACGTCTCGCTGAATCATTTCAGGCTCAAGGCGATACGCTAGCCGAGGTACATGTGTTTTCCTCCTATATGTTCGTCTTCGACCATATAACCCGAACTCATTTACCTACTACTCTCTGTTCAATTGTACGTATAAACAGTATCTAACTTTGATAGTTAAATTTCTTTCTTCATGAGAGAGTGATAACTTCATGAGGTGAATTGAAAAGAAAATAGTTACTCTGTAACAACCTTGCTGGTTTATGGTTACTGAGTCATCAATTGTTAATCACATAAGTAAATTTCGAAAAAACATCTCTTAATCGTATGCGGTGTTTCTTGCAATGCAACTACAAAAAGTCTTCATGAACAGTTGGTTCGGAACATCATCAGCCTAAAGCTATAGGAAACTGTTGAAAGAGGGAGAGGGCTATCAATGGGCGATAAATTTGAGTATCACTTTAAAAACAATAACTAGTTTTGGATCTTGCATTGGTTGAATTGGAATTTCTTGCATACTTGCATCTTGATCCTCTATCTCGGGAGAAGCCTTTTGATTTGCACCCTTGGTGTATGTTGCAAGTGAACAATAAAACAAACCTACTTGCAATTGAACCCTTGGTGTACGTTGTATTTATTGGTTTTAGGGTAACTGGTACCTTTATCTTGCCTTCCATGATTTGAATGGTTTCCAGTCTGATGTATAGATAGGATACAGATGTAAATCATTTATAAATCATGAAAAAGGCACAAATATGAAACATCAATGATGGATCTTCTTCTAAAAATTAGGTAACAGGCGAGGGAAAGACATGCCTTCAAAAAACATACTTATCCTCTTGCCTTTGTATTTATTTTTATGATTTAACACTCGCAGTGATGCAATGGTTTTCATTCTCAAGAATTTTCATTTTAAGTTATGCTATTTGCACTTCAACTATTAAATGAAAGAAGATAGAAGGTGCATCTCTTATGAAAAGTTGAGAAGCTATTTGTATCTTTGTATGTGATCAGTCCCTTTGGGGACATCCGATAAAATTGGAATGATATTAGCATGACCCCTATGCAAGGATGACAAAGCACTAATCTTTGTATGTGATCATTGTGATGTTTTATACCAAAGGTTTATAAGGAGATCTTAACCTAACTAAATTGTTTCCATTTGAACATGTATCTAGATGATTCAGATCATGTGACTATTTGGTACATAGAAATATTATTATTTGCTTCGGATCATAGTCATAGTCACTATTTGGTTAATTTCAACTCAAACATGGGCTTGTCCACAAATCTTTGGATTGGTTTCTCCTAGAAGAAATTTACTTAAAAATGAAGCTTGTGGAGTGGCCTTTGTTTATGTTGTTGTTATATATATTGTCCTCAAGCTTTGACATTTAGATGTTGAATATTATAATTATACTCCAAGGCCATGTGCTTTTTCCTTTTGTAGGGTGGGAAATTTCGGGAAGCTCTGGGAAAATGGGAGACTGCTATTACTTTGATGCCTGAAAATGCAGTTTTACATGAACAAAAGGCACAAGTTCTACTGGAGGTTGGAGAAGCTTGGGGTGCTTTGAAGGCAGCAACCAGTATGTTCTTTTCAATTACCTTTTACTGTTTCGATTGTCTAAGATTTGCATATTGGTTGGCAAGCTCTATTTTTAAGTGAAATTGGTAAGGTCTTTAGGGTATATGCATGGGCATACTAATGAGTTTTATCTGTACAATTGAAGTTTTGTTTATGGTCTGGGTGATGAAGTTATAGCCCTTTTCTTTTTTGGTTGTAAGGAACTTACTTTTCCACAATTTGTTTGACATTTCGAATTATTTTATATGGTGGCCTATATTTGAATTTGAACTCAACCTGCAGGAGCTACTGACTTAGATCCATCATGGGCTGAGGTACAACTAACTCTTATACTGTCAGTACAATACCCATATCTCTGCAACGCCTTTTACTCCACATTTAAAATTGTGTCCTTTTTTCGTCTTCCATGGGTTTTGTCTCAGGTGATTCTATCCATTTAATTGCCTATTTTCTGCTGCGAACTTGCATCTGGGTATTCACTAGCTCCATATTTTGGGTGACCATGAGAAACCTTTTTGTACTCTATTCATATAGATTAATTTTCCCTGTTATTGGATGCCATCTTCTTGTGAACGAATCCATGTCAGTTAAAACTTTTTCTTGAACCTGCAAAAATAGACATTTTCTTTGTACTTCGAAGTGAAAAAATAGACATGCTTATGCTCTAAATCAACGATCAGCTTGAGACTCCAGCCAATTGTGAGTATTATTACCTACTGGAGACATGACAAGGAGGTGAAGAAGGAGAAGAGCCAAAGGGGAATTAGAGATACATGTTTTGTAATTTTTGTTGGGGTCTTTGGATATTTCATTCAATTCAAATTGTTTCTTAAATAAATAAAAATAATAATAATAAAAAAAATAAAAGAATTTTTTTTTTTTTTTGTTGGGGTTTGGAGGTCAAGCTGGAAGTTTACTGCAAGGAAAGGGTGAAAACTTGAGAGACATAGTAGGCAGGAAAAGAAAAATACATTTTATTCCTATTAGATCTGAATTATCTGACAATGCCTTGCACGTTCAATTTGCTAACTCCAAAAATCAGCATTTAGAAATCATGTAGTTGGGAAATTTATGCTCTCTAATTGATGCAATGTTTCTATTACCTTTCTAGGATCTGCCATTCAAGATAAACTTCTTTTGCATTGGGTGTCTCTAGTTAGTTGTAACACAATTGTCTTGCTGACCAGCTTTCCATTTTGAGTTGATTTGTTGATAACTTTAAATGCTTAAAATTTTCTCATTCATCGTGCTGTTCACCTAGATTGAGTGAATGTGAAGAAGCTTGTCCCATTTGTTAGTTGTTAACTGATTTCTTGTTCTCTTTTCATCTCAAATACTAAGGCGTGGATCACTCTTGGTAGAGCACAATTAAACTTTGGGGAACCTGATAGTGCTATAGAAAGCTTTGACAGAGCACTGGCCATAAAGGTACACTGATTTTAGCAGCTTCATCCATTTGTATTTATACCAGTGTTAACACTCTGCTGAAACCTACTAAATAAGGTATCTTGTTGTGTGCTGCCCTGACTCGGTCGGTCTGTCTTGTATACTTGTATAGTCAGTTAAAATCTAGCTTTCATAATAGTTTCCCAAAAGGCGAAAATTTTGATTGTTAATATACCAATCATTTTGGGGGCTCTTGCATCATTTAGCGTCCAACCAGCAACCTGATTTATTCCCAGAAGCCCTAATCACTTATGGTTGAAGTCCATTAAAGCTTTTGCTCGATCCCATATATTTTATGGTGAAGAAAAATCCTCTATTGTGCAGCCTGATTCTGGAGACGCCCGAGATGATCGACAGACTGCAATGCATCTTATAAAGCGGCGAAAACAGCTCCATTCAGCTGGGTTGAGCAGTTCTAAAAATCGTTATTTGGTGGGAGAGAAGTTGAACAATGCTGATGGTTCATGAAGTGTAATCTGAAAAATTAGAGGATGTAGTTTGTAATTTAGGTTCTTAATGCAGGGTTGAGCTTTCCCATGACCAAAAGCAGCATGTACCTGAGTTTATTTAGTTCGCAAATCATCAAGTCCTCTTTGTGTATTTTTTACTGAAACTAGGAAAAAATGAAAATACAGGTAAATAGCGAAATACTATGTGAATATAGCATCTATTTCTTTTCAAA

mRNA sequence

ATGTGCGTTTGGGCTTTCAGCCCGACGATGAGATTCGACCCGCTATTGATCGAGAACCTGTCCGTTCGTTCCGAATGCGAAAAAAGTTCTGCCTGTTCGTACAGAGGGTTGGAGACGACGATGAAGCTCACATGGAAGAACAAGGGCAATAGTAAGAAGCGATCTCTCGCAGCAGTTTCAAGCCGTTCAAATCTTCCTTTTGAGGTGCCTATCGAGGTTGAGGAACACGATAGGGCTAATCGCCAAGATAAAGAATTAAACCTTGAGGCGGTAGACCGGAGAGAGGATGGAGCTTCAGACCGTTCGTTTTCAGACCTCAAACGTCTCGCTGAATCATTTCAGGCTCAAGGCGATACGCTAGCCGAGGTACATGGTGGGAAATTTCGGGAAGCTCTGGGAAAATGGGAGACTGCTATTACTTTGATGCCTGAAAATGCAGTTTTACATGAACAAAAGGCACAAGTTCTACTGGAGGTTGGAGAAGCTTGGGGTGCTTTGAAGGCAGCAACCAGAGCTACTGACTTAGATCCATCATGGGCTGAGGTACAACTAACTCTTATACTGTCAGTACAATACCCATATCTCTGCAACGCCTTTTACTCCACATTTAAAATTGTGTCCTTTTTTCGTCTTCCATGGGTTTTGTCTCAGGCGTGGATCACTCTTGGTAGAGCACAATTAAACTTTGGGGAACCTGATAGTGCTATAGAAAGCTTTGACAGAGCACTGGCCATAAAGCCTGATTCTGGAGACGCCCGAGATGATCGACAGACTGCAATGCATCTTATAAAGCGGCGAAAACAGCTCCATTCAGCTGGGTTGAGCAGTTCTAAAAATCGTTATTTGGTGGGAGAGAAGTTGAACAATGCTGATGGTTCATGAAGTGTAATCTGAAAAATTAGAGGATGTAGTTTGTAATTTAGGTTCTTAATGCAGGGTTGAGCTTTCCCATGACCAAAAGCAGCATGTACCTGAGTTTATTTAGTTCGCAAATCATCAAGTCCTCTTTGTGTATTTTTTACTGAAACTAGGAAAAAATGAAAATACAGGTAAATAGCGAAATACTATGTGAATATAGCATCTATTTCTTTTCAAA

Coding sequence (CDS)

ATGTGCGTTTGGGCTTTCAGCCCGACGATGAGATTCGACCCGCTATTGATCGAGAACCTGTCCGTTCGTTCCGAATGCGAAAAAAGTTCTGCCTGTTCGTACAGAGGGTTGGAGACGACGATGAAGCTCACATGGAAGAACAAGGGCAATAGTAAGAAGCGATCTCTCGCAGCAGTTTCAAGCCGTTCAAATCTTCCTTTTGAGGTGCCTATCGAGGTTGAGGAACACGATAGGGCTAATCGCCAAGATAAAGAATTAAACCTTGAGGCGGTAGACCGGAGAGAGGATGGAGCTTCAGACCGTTCGTTTTCAGACCTCAAACGTCTCGCTGAATCATTTCAGGCTCAAGGCGATACGCTAGCCGAGGTACATGGTGGGAAATTTCGGGAAGCTCTGGGAAAATGGGAGACTGCTATTACTTTGATGCCTGAAAATGCAGTTTTACATGAACAAAAGGCACAAGTTCTACTGGAGGTTGGAGAAGCTTGGGGTGCTTTGAAGGCAGCAACCAGAGCTACTGACTTAGATCCATCATGGGCTGAGGTACAACTAACTCTTATACTGTCAGTACAATACCCATATCTCTGCAACGCCTTTTACTCCACATTTAAAATTGTGTCCTTTTTTCGTCTTCCATGGGTTTTGTCTCAGGCGTGGATCACTCTTGGTAGAGCACAATTAAACTTTGGGGAACCTGATAGTGCTATAGAAAGCTTTGACAGAGCACTGGCCATAAAGCCTGATTCTGGAGACGCCCGAGATGATCGACAGACTGCAATGCATCTTATAAAGCGGCGAAAACAGCTCCATTCAGCTGGGTTGAGCAGTTCTAAAAATCGTTATTTGGTGGGAGAGAAGTTGAACAATGCTGATGGTTCATGA

Protein sequence

MCVWAFSPTMRFDPLLIENLSVRSECEKSSACSYRGLETTMKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASDRSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVGEAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNRYLVGEKLNNADGS

Homology

[Close]

BLAST of Clc08G05920 vs. NCBI nr
Match: XP_038884189.1 (tetratricopeptide repeat protein 33 [Benincasa hispida])

HSP 1 Score: 370.9 bits (951), Expect = 9.9e-99
Identity = 201/253 (79.45%), Postives = 208/253 (82.21%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGN+KKRSL A+S RSNLPFEVP EVEE DRAN QDKE+N+EA+DRRED ASD
Sbjct: 1   MKLTWKNKGNTKKRSLTAISRRSNLPFEVPDEVEEDDRANPQDKEVNVEAIDRREDEASD 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
           RSFSDLKRLAESFQAQGDTLAE   GKFREALGKWETA+TLMPENAVLHEQKAQVLLEVG
Sbjct: 61  RSFSDLKRLAESFQAQGDTLAE--DGKFREALGKWETALTLMPENAVLHEQKAQVLLEVG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 215

Query: 281 YLVGEKLNNADGS 294
           YLVG+KLNNADGS
Sbjct: 241 YLVGDKLNNADGS 215

[Close]

BLAST of Clc08G05920 vs. NCBI nr
Match: XP_004149437.1 (tetratricopeptide repeat protein 33 [Cucumis sativus] >KGN47682.1 hypothetical protein Csa_018236 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.6e-91
Identity = 191/253 (75.49%), Postives = 200/253 (79.05%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGNSKKRSL  +S+RSNLPFEVP  VEE DRAN Q KE+  + VDR ED ASD
Sbjct: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
           RS SDLKRLAESFQAQG+TLAE  GGKFREALGKWETA+TLMPENAVLHEQKAQVLLEVG
Sbjct: 61  RSLSDLKRLAESFQAQGNTLAE--GGKFREALGKWETALTLMPENAVLHEQKAQVLLEVG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGD +DDRQTAM LIKRRKQLHSAGLSSSKNR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQTAMRLIKRRKQLHSAGLSSSKNR 215

Query: 281 YLVGEKLNNADGS 294
           YLVGEKL++ADGS
Sbjct: 241 YLVGEKLSDADGS 215

[Close]

BLAST of Clc08G05920 vs. NCBI nr
Match: XP_023551627.1 (tetratricopeptide repeat protein 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.4 bits (882), Expect = 9.9e-91
Identity = 185/252 (73.41%), Postives = 200/252 (79.37%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGNSKKRS  A+SSRSNLPFEVP EVEE  R NRQD E++++AVDRREDGAS+
Sbjct: 1   MKLTWKNKGNSKKRSFTAISSRSNLPFEVPGEVEEDGRVNRQDNEIDVKAVDRREDGASE 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
            SFSDLKRLAESF+ QG+TLAE   GK REALGKWETA+TLMPENAVLHEQK+QVLLE+G
Sbjct: 61  SSFSDLKRLAESFRDQGNTLAE--NGKLREALGKWETALTLMPENAVLHEQKSQVLLEIG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGDA+DDR+TA HLIKRRKQLHSAGLSSS+NR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDAQDDRKTATHLIKRRKQLHSAGLSSSENR 214

Query: 281 YLVGEKLNNADG 293
           Y VG+KLNN DG
Sbjct: 241 YFVGDKLNNVDG 214

[Close]

BLAST of Clc08G05920 vs. NCBI nr
Match: XP_022993931.1 (tetratricopeptide repeat protein 33 [Cucurbita maxima])

HSP 1 Score: 342.0 bits (876), Expect = 4.9e-90
Identity = 184/251 (73.31%), Postives = 199/251 (79.28%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGNSKKRS  A+SSRSNLPFEVP EVEE  R NRQD E++++AVDRREDGAS+
Sbjct: 1   MKLTWKNKGNSKKRSFTAISSRSNLPFEVPGEVEEDSRVNRQDNEIDVKAVDRREDGASE 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
            S SDLKRLAESF+ QG+TLAE   GK REALGKWETA+TLMPENAVLHEQK+QVLLE+G
Sbjct: 61  SSSSDLKRLAESFRDQGNTLAE--NGKLREALGKWETALTLMPENAVLHEQKSQVLLEIG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGDA+DDR+TAMHLIKRRKQLHSAGLSSS+NR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDAQDDRKTAMHLIKRRKQLHSAGLSSSENR 213

Query: 281 YLVGEKLNNAD 292
           Y VG+KLNN D
Sbjct: 241 YFVGDKLNNVD 213

[Close]

BLAST of Clc08G05920 vs. NCBI nr
Match: KAG6578936.1 (Tetratricopeptide repeat protein 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-89
Identity = 196/292 (67.12%), Postives = 208/292 (71.23%), Query Frame = 0


Query: 8   PTMRFDP----LLIENLSVRSECEKSS---ACSYRGLETTMKLTWKNKGNSKKRSLAAVS 67
           PT    P     L ENL V     KSS       RG E TMKLTWKNKGNSKKRS  A+S
Sbjct: 5   PTRNISPDRALKLTENLPVSFRIRKSSVYFTLFDRGFEETMKLTWKNKGNSKKRSFTAIS 64

Query: 68  SRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASDRSFSDLKRLAESFQAQGDTL 127
           SRSNLPFEVP E EE  R NRQD E     +DRREDGAS+ S SDLKRLAESF+ QG+TL
Sbjct: 65  SRSNLPFEVPGEGEEDGRVNRQDNE-----IDRREDGASESSSSDLKRLAESFRDQGNTL 124

Query: 128 AEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVGEAWGALKAATRATDLDPSWA 187
           AE   GK REALGKWETA+TLMPENAVLHEQK+QVLLE+GEAWGALKAATRATDLDPSWA
Sbjct: 125 AE--NGKLREALGKWETALTLMPENAVLHEQKSQVLLEIGEAWGALKAATRATDLDPSWA 184

Query: 188 EVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWITLGRAQLNFGEPDSAIESFD 247
           E                                    AWITLGRAQLNFGEPDSAIESFD
Sbjct: 185 E------------------------------------AWITLGRAQLNFGEPDSAIESFD 244

Query: 248 RALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNRYLVGEKLNNADG 293
           RALAIKPDSGDA+DDR+TA HLIKRRKQLHSAGLSSS+NRY VG+KLNN DG
Sbjct: 245 RALAIKPDSGDAQDDRKTATHLIKRRKQLHSAGLSSSENRYFVGDKLNNVDG 253

[Close]

BLAST of Clc08G05920 vs. ExPASy Swiss-Prot
Match: Q6DI40 (Tetratricopeptide repeat protein 33 OS=Danio rerio OX=7955 GN=ttc33 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.3e-12
Identity = 71/242 (29.34%), Postives = 107/242 (44.21%), Query Frame = 0


Query: 45  WKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASDRSFS 104
           WK K   +      VS ++   FE   E  + D   R+  +  L  + R+ +   +   +
Sbjct: 6   WKRKVGER------VSKQTVQQFEQDSEQADEDEVEREGVDW-LHVIKRKREVLLEDCAA 65

Query: 105 DLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVGEAWG 164
             KRL E    +G  LAE    +  EAL KW+ A+ L PE+AVL+E K+QVL+ +GE + 
Sbjct: 66  KSKRLKE----EGALLAE--QDRNWEALKKWDEAVQLTPEDAVLYEMKSQVLITLGEVFL 125

Query: 165 ALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWITLGR 224
           A+++A  AT L P W                                 W   +AW TLGR
Sbjct: 126 AVQSAEMATRLRPIW---------------------------------W---EAWQTLGR 185

Query: 225 AQLNFGEPDSAIESFDRALAIKPDSGDA-RDDRQTAMHLIKRRKQLHSAGLSSSKNRYLV 284
           AQL+ GE + A+ SF  AL + P       +D   A+ L + ++ L        + R L+
Sbjct: 186 AQLSLGEVELAVRSFQVALHLHPSERPLWEEDLNWALKLRENQQSLREKASQVDEARRLL 198

Query: 285 GE 286
            E
Sbjct: 246 VE 198

[Close]

BLAST of Clc08G05920 vs. ExPASy Swiss-Prot
Match: Q5M990 (Tetratricopeptide repeat protein 33 OS=Xenopus laevis OX=8355 GN=ttc33 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.1e-11
Identity = 67/226 (29.65%), Postives = 100/226 (44.25%), Query Frame = 0


Query: 56  LAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLE--------AVDRREDGASDRSFSDLK 115
           +A+   +  +  +V  EV +H      D+ + L+        A+ R++D   + + +  K
Sbjct: 1   MASFGWKRKIGEKVSKEVSQHFEEEAADESVVLDSHDVDWLHAIKRKKDVLLEDNVAKSK 60

Query: 116 RLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVGEAWGALK 175
           RL E    +G  LAE   G+ +EAL KW+ AI L P +A L+E KAQVL+ V E + A++
Sbjct: 61  RLKE----EGGLLAE--DGRQKEALTKWDEAIQLTPGDAALYEMKAQVLMGVHEIFPAVQ 120

Query: 176 AATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWITLGRAQL 235
           AA  A   +P + E                                    AW TLGRAQL
Sbjct: 121 AAETAVQRNPHFVE------------------------------------AWQTLGRAQL 180

Query: 236 NFGEPDSAIESFDRALAIKPDSGDA-RDDRQTAMHLIKRRKQLHSA 273
           + GE   AI SF   L I P + +    D   A  L+ ++    SA
Sbjct: 181 SLGEITMAIRSFQIGLHICPANTELWEQDLNWARQLLLQKMDTESA 184

[Close]

BLAST of Clc08G05920 vs. ExPASy Swiss-Prot
Match: Q9D6K7 (Tetratricopeptide repeat protein 33 OS=Mus musculus OX=10090 GN=Ttc33 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.4e-09
Identity = 65/218 (29.82%), Postives = 100/218 (45.87%), Query Frame = 0


Query: 52  KKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASDRSFSDLKRLAE 111
           K+R    VS  ++  FE     +E D A  +D    L+A  RR++   +      K+ ++
Sbjct: 7   KRRIGEKVSKATSQQFEAE-AADEKDAAENEDGNW-LQASKRRKETLQE----GCKQRSQ 66

Query: 112 SFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVGEAWGALKAATR 171
             + +G  LAE    +++EA+ KW+ A+ L P +A L+E K+QVLL + E + A+ AA  
Sbjct: 67  QLKDEGAQLAE--NKRYKEAIQKWDEALQLTPGDATLYEMKSQVLLSLHEMFPAVHAAEM 126

Query: 172 ATDLDP-SWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWITLGRAQLNFG 231
           A   +P SW                                     +AW TLGRAQL  G
Sbjct: 127 AVKRNPHSW-------------------------------------EAWQTLGRAQLGLG 179

Query: 232 EPDSAIESFDRALAIKPDSGDA-RDDRQTAMHLIKRRK 268
           E   AI SF  AL I P + +  ++D   A  L +++K
Sbjct: 187 EIVLAIRSFQIALHIYPMNPELWKEDLSWARKLQEQQK 179

[Close]

BLAST of Clc08G05920 vs. ExPASy Swiss-Prot
Match: Q6PID6 (Tetratricopeptide repeat protein 33 OS=Homo sapiens OX=9606 GN=TTC33 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 65/225 (28.89%), Postives = 99/225 (44.00%), Query Frame = 0


Query: 45  WKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASDRSFS 104
           WK K   K      VS  ++  FE   E  +       D+   L A+ RR++   +    
Sbjct: 6   WKRKIGEK------VSKVTSQQFEA--EAADEKDVVDNDEGNWLHAIKRRKEILLEGCAE 65

Query: 105 DLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVGEAWG 164
             K+L +    +G +LAE    ++REA+ KW+ A+ L P +A L+E K+QVL+ + E + 
Sbjct: 66  KSKQLKD----EGASLAE--NKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFP 125

Query: 165 ALKAATRATDLDP-SWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWITLG 224
           A+ AA  A   +P SW                                     ++W TLG
Sbjct: 126 AVHAAEMAVQQNPHSW-------------------------------------ESWQTLG 179

Query: 225 RAQLNFGEPDSAIESFDRALAIKPDSGDA-RDDRQTAMHLIKRRK 268
           RAQL  GE   AI SF  AL I P + +  ++D   A  L +++K
Sbjct: 186 RAQLGLGEIILAIRSFQVALHIYPMNPEIWKEDLSWARTLQEQQK 179

[Close]

BLAST of Clc08G05920 vs. ExPASy TrEMBL
Match: A0A0A0KH06 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G376230 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.3e-91
Identity = 191/253 (75.49%), Postives = 200/253 (79.05%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGNSKKRSL  +S+RSNLPFEVP  VEE DRAN Q KE+  + VDR ED ASD
Sbjct: 1   MKLTWKNKGNSKKRSLTTISTRSNLPFEVPGVVEEDDRANPQVKEVTAQPVDRSEDEASD 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
           RS SDLKRLAESFQAQG+TLAE  GGKFREALGKWETA+TLMPENAVLHEQKAQVLLEVG
Sbjct: 61  RSLSDLKRLAESFQAQGNTLAE--GGKFREALGKWETALTLMPENAVLHEQKAQVLLEVG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGD +DDRQTAM LIKRRKQLHSAGLSSSKNR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDVQDDRQTAMRLIKRRKQLHSAGLSSSKNR 215

Query: 281 YLVGEKLNNADGS 294
           YLVGEKL++ADGS
Sbjct: 241 YLVGEKLSDADGS 215

[Close]

BLAST of Clc08G05920 vs. ExPASy TrEMBL
Match: A0A6J1JXQ4 (tetratricopeptide repeat protein 33 OS=Cucurbita maxima OX=3661 GN=LOC111489781 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.4e-90
Identity = 184/251 (73.31%), Postives = 199/251 (79.28%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGNSKKRS  A+SSRSNLPFEVP EVEE  R NRQD E++++AVDRREDGAS+
Sbjct: 1   MKLTWKNKGNSKKRSFTAISSRSNLPFEVPGEVEEDSRVNRQDNEIDVKAVDRREDGASE 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
            S SDLKRLAESF+ QG+TLAE   GK REALGKWETA+TLMPENAVLHEQK+QVLLE+G
Sbjct: 61  SSSSDLKRLAESFRDQGNTLAE--NGKLREALGKWETALTLMPENAVLHEQKSQVLLEIG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGDA+DDR+TAMHLIKRRKQLHSAGLSSS+NR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDAQDDRKTAMHLIKRRKQLHSAGLSSSENR 213

Query: 281 YLVGEKLNNAD 292
           Y VG+KLNN D
Sbjct: 241 YFVGDKLNNVD 213

[Close]

BLAST of Clc08G05920 vs. ExPASy TrEMBL
Match: A0A5D3D571 (Tetratricopeptide repeat protein 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00340 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 9.1e-90
Identity = 187/253 (73.91%), Postives = 198/253 (78.26%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNK NSKKRSLA +SSRSNLPFEVP EV E D AN  DKE+  + VD+ E  ASD
Sbjct: 1   MKLTWKNKANSKKRSLAPISSRSNLPFEVPGEVGEDDAANPLDKEVTAQPVDQSEGEASD 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
           RSFSDLKRLAESFQAQGDTLAE   GKFREALGKWETA+TLMPENA+LHEQKAQVLLEVG
Sbjct: 61  RSFSDLKRLAESFQAQGDTLAE--SGKFREALGKWETALTLMPENAILHEQKAQVLLEVG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFD+ALAIKPDSGDA+DDRQTAM LIKRRKQLHS+GLSSS NR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDKALAIKPDSGDAQDDRQTAMRLIKRRKQLHSSGLSSSNNR 215

Query: 281 YLVGEKLNNADGS 294
           YLVGEKL+NADG+
Sbjct: 241 YLVGEKLSNADGT 215

[Close]

BLAST of Clc08G05920 vs. ExPASy TrEMBL
Match: A0A1S3B3U0 (tetratricopeptide repeat protein 33 OS=Cucumis melo OX=3656 GN=LOC103485686 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 9.1e-90
Identity = 187/253 (73.91%), Postives = 198/253 (78.26%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNK NSKKRSLA +SSRSNLPFEVP EV E D AN  DKE+  + VD+ E  ASD
Sbjct: 1   MKLTWKNKANSKKRSLAPISSRSNLPFEVPGEVGEDDAANPLDKEVTAQPVDQSEGEASD 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
           RSFSDLKRLAESFQAQGDTLAE   GKFREALGKWETA+TLMPENA+LHEQKAQVLLEVG
Sbjct: 61  RSFSDLKRLAESFQAQGDTLAE--SGKFREALGKWETALTLMPENAILHEQKAQVLLEVG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFD+ALAIKPDSGDA+DDRQTAM LIKRRKQLHS+GLSSS NR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDKALAIKPDSGDAQDDRQTAMRLIKRRKQLHSSGLSSSNNR 215

Query: 281 YLVGEKLNNADGS 294
           YLVGEKL+NADG+
Sbjct: 241 YLVGEKLSNADGT 215

[Close]

BLAST of Clc08G05920 vs. ExPASy TrEMBL
Match: A0A6J1FH27 (tetratricopeptide repeat protein 33 OS=Cucurbita moschata OX=3662 GN=LOC111445415 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.4e-85
Identity = 180/251 (71.71%), Postives = 192/251 (76.49%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEEHDRANRQDKELNLEAVDRREDGASD 100
           MKLTWKNKGNSKKRS  A+SSRSNLPFEVP E EE  R NRQD E     +DRREDGAS+
Sbjct: 1   MKLTWKNKGNSKKRSFTAISSRSNLPFEVPGEGEEDGRVNRQDNE-----IDRREDGASE 60

Query: 101 RSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKAQVLLEVG 160
            S SDLKRLAESF+ QG+TLAE   GK REALGKWETA+TLMPENAVLHEQK+QVLLE+G
Sbjct: 61  SSSSDLKRLAESFRDQGNTLAE--NGKLREALGKWETALTLMPENAVLHEQKSQVLLEIG 120

Query: 161 EAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPWVLSQAWI 220
           EAWGALKAATRATDLDPSWAE                                    AWI
Sbjct: 121 EAWGALKAATRATDLDPSWAE------------------------------------AWI 180

Query: 221 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAGLSSSKNR 280
           TLGRAQLNFGEPDSAIESFDRALAIKPDSGDA+DDR+TA HLIKRRKQLHSAGLSSS+NR
Sbjct: 181 TLGRAQLNFGEPDSAIESFDRALAIKPDSGDAQDDRKTATHLIKRRKQLHSAGLSSSENR 208

Query: 281 YLVGEKLNNAD 292
           Y VG+KLNN D
Sbjct: 241 YFVGDKLNNVD 208

[Close]

BLAST of Clc08G05920 vs. TAIR 10
Match: AT1G77230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.9e-47
Identity = 117/253 (46.25%), Postives = 153/253 (60.47%), Query Frame = 0


Query: 41  MKLTWKNKGNSKKRSLAAVSSRSNLPFEVPIEVEE----HDRANRQDKELNLEAVDRRED 100
           MKLTW NK N KKRS   +S+  +LPFE    +E     H R +  D+    + +D  E 
Sbjct: 1   MKLTW-NK-NPKKRSRLVLSNFPDLPFEKDDSLESQSHLHFREDDIDRRQTTDQLDSSEV 60

Query: 101 GAS---DRSFSDLKRLAESFQAQGDTLAEVHGGKFREALGKWETAITLMPENAVLHEQKA 160
           G +   +    + K+LAES +AQGD  AE   GK++EALGKWE A+ L+PE+A+LHEQKA
Sbjct: 61  GGNHPRENFDVEAKKLAESIRAQGDKFAE--EGKYQEALGKWEAALNLVPEDAILHEQKA 120

Query: 161 QVLLEVGEAWGALKAATRATDLDPSWAEVQLTLILSVQYPYLCNAFYSTFKIVSFFRLPW 220
           QVLLE+G+AW ALKAATRAT++DPSWAE                                
Sbjct: 121 QVLLELGDAWKALKAATRATEIDPSWAE-------------------------------- 180

Query: 221 VLSQAWITLGRAQLNFGEPDSAIESFDRALAIKPDSGDARDDRQTAMHLIKRRKQLHSAG 280
               AW TLGRAQLNFGEPDSAI SF+ AL I  DS +A+DD ++A  LIK+R+QL ++G
Sbjct: 181 ----AWTTLGRAQLNFGEPDSAIRSFESALLINADSREAKDDLKSAKQLIKKREQLQTSG 213

Query: 281 LSSSKNRYLVGEK 287
             +   R++V +K
Sbjct: 241 QDTDTTRFVVNDK 213

The following BLAST results are available for this feature:

BLAST of Clc08G05920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884189.1	9.9e-99	79.45	tetratricopeptide repeat protein 33 [Benincasa hispida]	[more]
XP_004149437.1	2.6e-91	75.49	tetratricopeptide repeat protein 33 [Cucumis sativus] >KGN47682.1 hypothetical p...	[more]
XP_023551627.1	9.9e-91	73.41	tetratricopeptide repeat protein 33 [Cucurbita pepo subsp. pepo]	[more]
XP_022993931.1	4.9e-90	73.31	tetratricopeptide repeat protein 33 [Cucurbita maxima]	[more]
KAG6578936.1	1.1e-89	67.12	Tetratricopeptide repeat protein 33, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Clc08G05920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DI40	7.3e-12	29.34	Tetratricopeptide repeat protein 33 OS=Danio rerio OX=7955 GN=ttc33 PE=2 SV=1	[more]
Q5M990	8.1e-11	29.65	Tetratricopeptide repeat protein 33 OS=Xenopus laevis OX=8355 GN=ttc33 PE=2 SV=1	[more]
Q9D6K7	3.4e-09	29.82	Tetratricopeptide repeat protein 33 OS=Mus musculus OX=10090 GN=Ttc33 PE=1 SV=1	[more]
Q6PID6	1.1e-07	28.89	Tetratricopeptide repeat protein 33 OS=Homo sapiens OX=9606 GN=TTC33 PE=1 SV=2	[more]

BLAST of Clc08G05920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH06	1.3e-91	75.49	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G376230 ...	[more]
A0A6J1JXQ4	2.4e-90	73.31	tetratricopeptide repeat protein 33 OS=Cucurbita maxima OX=3661 GN=LOC111489781 ...	[more]
A0A5D3D571	9.1e-90	73.91	Tetratricopeptide repeat protein 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B3U0	9.1e-90	73.91	tetratricopeptide repeat protein 33 OS=Cucumis melo OX=3656 GN=LOC103485686 PE=4...	[more]
A0A6J1FH27	1.4e-85	71.71	tetratricopeptide repeat protein 33 OS=Cucurbita moschata OX=3662 GN=LOC11144541...	[more]

BLAST of Clc08G05920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77230.1	1.9e-47	46.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 146..179 e-value: 76.0 score: 7.2 coord: 110..145 e-value: 500.0 score: 0.0 coord: 216..249 e-value: 4.2E-4 score: 29.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 216..249 score: 12.3314
None	No IPR available	PFAM	PF13428	TPR_14	coord: 217..253 e-value: 3.9E-5 score: 24.1
None	No IPR available	PANTHER	PTHR15544	OSMOSIS RESPONSIVE FACTOR	coord: 217..288 coord: 41..186
None	No IPR available	PROSITE	PS50293	TPR_REGION	coord: 216..248 score: 9.226884
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 101..282 e-value: 3.7E-19 score: 70.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 124..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G05920.2	Clc08G05920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding