Clc08G05720 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G05720
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Proteasome subunit beta
Location	ClcChr08: 16946923 .. 16951336 (-)
RNA-Seq Expression	Clc08G05720
Synteny	Clc08G05720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAACTGAGACAAGGGGTTGGAGTGAAGCCCAAGCCATCAATTGCTATACTAAAAACCAGTGTGTTGTTCATTCCCGCATTCCTCTTTGCGATTCAACTCCCTCTTCTTTCAGGTTTGGATTTCTTCTTTTAATCTTCAAAAATTCAGTTCATTTTCTATCTGTGAATGTTTTTTTTTATTAGGGTTTTGGAACGGGATTTCATTTCTTTGATTTTGATTTCGTTTTCGGTTTCGGTACGAACATTTCCGATCGCCCTGGCCTGACAATTGTTTTACCCTTTCTTTTCCTCATGTCGCAGAGATTCTCATAGTTTTTTACCGGGAAAGCTTGGGTTTCTGATCTGATGTCGGTGCGTTTTTCTTCTTAGCATTATTGCGCTGCTTCTGGAAGTGTTAGTTAGTATGTAGTTCATGCATTTTGATAATGGATTGCCATTGTAGATCTTTGAGTATAATGGAAGTGCTGTAGTCGCGATGGTGGGGAAAAATTGTTTTGCCATTGCCAGTGATCGTAGGCTTGGTGTTCAGCTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTATTTCTCGGCCTTTCGGGCCTTGGTACCGATGCTCAGACACTGTATGTTTCTGTTGGTAGATTCGTTTTTTTTTCTTGGTTTAATTTTTCATTGCTTACCTCCTGCCCTTGAAATAAAGGTATCAACGGCTTGTTTATCAGCACAAACTGTACCAACTTCGTGAAGAGAGGGACATGAAGCCTGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACAACTACTTAGTTTTTATTTACCTCTTTTTCAGCAGTTTGAATCACGTATTCTCTATATTTTCGGTCTTGGTTAAAAAACATGGTTGCAATTTCTTCAGAATTTGCACAGCTTCTTTTGCGTGTCTATTGATTCTTCTACCAACGTGATTCTTGGTTTTTATTTACCTCTGTTGGTGTGAGATCATAAGCTAACTTGACTTGACGGGGATGTTGAGAGTTTATAGCATGTCAAGCTTTTCACTGCAATACTGTACATGTGTAGTCAAACCGTGTTATGGAATTGGTATATGTCAAACTGACTAACAAGATATTTTATACTTAATTTAAAATAGGATTACAAGTTGAATTTCTGGATAGTTGAAATGTGGATAAACTTAGGAACGATCAAGGGTCTCCATCTCAAGATAGTTCCTAGTCTCTGTCCTAGCTTTTGGAGGCAATAAAAACTGTTGTGACATAATAACAACGAAAGTGAAATGATAGAATGAACTTTTTCTCTCAGTAATATGTAAGTTAGTTTTTAGTGCTTGCCATGAATACACCAAAAGCTTAATGATCGGAATGCAATTATGGATATTATAAGTGTATATTAGTAATTACGTAAGGAGGTGGTTAAGGGGTTTGGTTGTAAATAGAAGGATTGTGGGAGGGAGTTAGACATTTGGTGAGTGAATTAGGGGTTGGGAGAGATCTCAAGAGGGAGTGTGCAACTACGACAAATTACATGTTTATCTTGTAGTTCATTCTTAATATTGCAATATATTAGTTTTGTATATTATAGGTGTTTGGATACCTAACACAAGTACTATTTCCAAGAACTAAATACTTAAAATTTGGTATTCTCAATTTTCATGAAGTGGACTGCAGTACCACACTAAACTGTTGTCTTGCCCTAGCTTATAGAACTGGCCATGATGAAGTTGTGTTATAATTGGATCGGGTAGTAGTATCGCTCCTGAAATTTCTTTTGTTCTATAGATTTTTAATAGGTCATCCATGGATATAAATTGCATGGGAAAAGGGTTGAGTTTATAACCTTTTTCTTTATAAGATGCATTTTTTTAGGATAAGAGGTTGAATTTATAACTCTTATTTGGCCTTTTTAGGATCGATAAAAAATACTCATATATCAATTTTCTTGTTTGTAGGTTTGGTCCATATTTCTGCCAGCCTGTAATTGCTGGGTTGAGTGACAAAGACAAACCCTTCATTTGCACGATGGATTCCATTGGGGCCAAGTGAGCACTCTCTTTCTTCTTTCTTTGTCGTATTACCAACTTCTTGATTTTGTTTGATTTGAATTTTCGCTTAAATCATCTATATGGGTTTCTTCATTTTGTTTGGAATGTGCATCAGACTTGAAGTTGCAGCTTCTGCAACACATTGCAATGAAATTTGATTTTTGGGATAAATATTTTTCTAGGTTTAGGATTATCAAATGTAAAACTAATACACTGTCAAATTCATTGTTCACAGAGAGCTTGCTAAGGATTTTGTTGTTTCTGGTACTGCATCAGAGTCCCTTTATGGTGCTTGTGAAGCAATGTTTAAACCTGACATGGTATGTTGGTATAATTTATTTACATATGCTTTATATTCGTCATTGGGATTCTATATTGCTGCATTGAGTAAGGAATATTACTATTCCCCCCCCCACCACCACCACCACCACCACCACCACAAAAAAAAAAAAAGAAAAAGAAAAAAGAAAACCCCTTGTGAAATAGAGTACTGAGCAGTAAACACCATGGCTTTGCCTTAAGTGTATGTCCAAGGAAGAGGCAGAGACATTAGTGCATGTTTGTGTTTGAGAGAGTAGAAAAAAAAGGATGGATTTGATTAGAGACGTAACATAGACCAACCATTACCTTAGAGACTGGAAGAACAAATTTGGTACGTAAAACTATCTTCCCGTTGGAGTTTGAAAATCAGGCATAATCATTGAACAAGGGGAACGATAAATCTCATGGATTGAATCATTGCAAAAAAAAAAAAAGGAAGACAAAAAATGAAGGCAATTGTTTGATCATGGATAGTGACTTAATGGACTGTGATGAACAGATGAAGGGATGTAAAATCTGACTATTGAGGTTTCTAGAGAGTATGACGACGTCTCTAAGTAAGAGTGATTGAAGGTTAAGGCAAGTATGTAGAAGTGGCACTGGGCAGTTATCAGTGGTCAGATTGACAGTAAAAAATATTGAAAACCAAAACCAAAAGACTTAGTCTTTTGGTTTTGGTTTTCAATATTTTTTAAAGATAAACCAATATAGTCTTGCTGTTTTGGATTTTGAATTGAACATATCTAGTTAGAACGGACAGGCACTGTAGTTTGTTTTATCTGATTGTGCCAAGAGCTGCACATGATGTTCAAATTTGTCCTCTTGATAGATAGCCTAAAATATTCTTGTTAGGGAAAAATTTTCCTAGTTCTTTTGTGAAAGTGTTCTTAACTATATAGTGATCTCTGTTGATTCAATTTTGTATTGGGCAGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTGGATAGGGACTGTTTGAGTGGATGGGGGGGACACGTCTATGTTGTGTAAGCCACATATTCTTAATTCTCTATGTTTAATGGTTGGTTTATTGGTGTGAACGTGTTTTCGAAGAGGTGGTTTGTTGTGAATTGTGATTATTCTGGTAGATGTTGCTTTTGCTTAACATTCATATCACCTTGGATAAAATAATAATATTTGTAACAGAACATAACCTTAGTACACCGTTTATTATATAGAAAAAAATAGTAATAATAATGATAATGATAATATTTATAAGTTATAACAGAACATGTCATGAGGAAAGTTGGTGCGATTTATTAACTGTTTTAGAGGAGGTATTCATTATTTAAGTCTCGTTTGATAACTATTTTGTTTTTTGTTTTTTATTTTTGAAAATTATGCTCGTTTCTTCACAACTTCTTGGTAAGCTTTTCACCTTAAAAACACGTTTGAAATCTATGCCAAATTTCAAAAACAAAATCAAGTTTTTAAAATTTGGTTTGGATTTGGAAAACATTTTCAAAAAAGTAGGTAAGAAAAGAAAATTCTAGCTTCGTCCGTTTTTCTGAGAACAAATTGGAGACTATAGATGGAAGTAATGTTTATAAGCTTAATTTAAAAAAAAAGAAAACCAAAAACAAAAGAGTGCCTTAGTTTTCTATTTACGTTTCCAACGTTTTTGATGTGTTAGGATATAATTTTCAGATGCATCTCCACCGGTTTATGCTCTATCGTTATTTGTTATCTTTAATTAATAATTAAAGCCACTATGGTGTATCCAAAATATAGTAATAATAATAAAATAATCTAAACCATTATTGATGTCCCTGACAATTAGATCAACATTCCAAAAGTATCATTTTACACATACCGAATAAATTTTTCATTCATTTCTACCTAACTCTTACCTTTTATTTTTTCCCCTTTTACATTCGTTATATCTGTTTACCTTTCCCTGTCCGTTATATATTTTTGATTGACATAATCCTATAATTTGTTGCAGTACGCCTACTGAAGTAAAAGAGCGAATCTTGAAGGGACGCATGGATTAA

mRNA sequence

AGAAACTGAGACAAGGGGTTGGAGTGAAGCCCAAGCCATCAATTGCTATACTAAAAACCAGTGTGTTGTTCATTCCCGCATTCCTCTTTGCGATTCAACTCCCTCTTCTTTCAGAGATTCTCATAGTTTTTTACCGGGAAAGCTTGGGTTTCTGATCTGATGTCGATCTTTGAGTATAATGGAAGTGCTGTAGTCGCGATGGTGGGGAAAAATTGTTTTGCCATTGCCAGTGATCGTAGGCTTGGTGTTCAGCTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTATTTCTCGGCCTTTCGGGCCTTGGTACCGATGCTCAGACACTGTATCAACGGCTTGTTTATCAGCACAAACTGTACCAACTTCGTGAAGAGAGGGACATGAAGCCTGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACAACTACTTAGTTTTTATTTACCTCTTTTTCAGCAGTTTGAATCACCTTATAGAACTGGCCATGATGAAGTTGTGTTATAATTGGATCGGGTTTGGTCCATATTTCTGCCAGCCTGTAATTGCTGGGTTGAGTGACAAAGACAAACCCTTCATTTGCACGATGGATTCCATTGGGGCCAAAGAGCTTGCTAAGGATTTTGTTGTTTCTGGTACTGCATCAGAGTCCCTTTATGGTGCTTGTGAAGCAATGTTTAAACCTGACATGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTGGATAGGGACTGTTTGAGTGGATGGGGGGGACACGTCTATGTTGTTACGCCTACTGAAGTAAAAGAGCGAATCTTGAAGGGACGCATGGATTAA

Coding sequence (CDS)

ATGTCGATCTTTGAGTATAATGGAAGTGCTGTAGTCGCGATGGTGGGGAAAAATTGTTTTGCCATTGCCAGTGATCGTAGGCTTGGTGTTCAGCTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTATTTCTCGGCCTTTCGGGCCTTGGTACCGATGCTCAGACACTGTATCAACGGCTTGTTTATCAGCACAAACTGTACCAACTTCGTGAAGAGAGGGACATGAAGCCTGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACAACTACTTAGTTTTTATTTACCTCTTTTTCAGCAGTTTGAATCACCTTATAGAACTGGCCATGATGAAGTTGTGTTATAATTGGATCGGGTTTGGTCCATATTTCTGCCAGCCTGTAATTGCTGGGTTGAGTGACAAAGACAAACCCTTCATTTGCACGATGGATTCCATTGGGGCCAAAGAGCTTGCTAAGGATTTTGTTGTTTCTGGTACTGCATCAGAGTCCCTTTATGGTGCTTGTGAAGCAATGTTTAAACCTGACATGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTGGATAGGGACTGTTTGAGTGGATGGGGGGGACACGTCTATGTTGTTACGCCTACTGAAGTAAAAGAGCGAATCTTGAAGGGACGCATGGATTAA

Protein sequence

MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIELAMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD

Homology

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BLAST of Clc08G05720 vs. NCBI nr
Match: XP_023551487.1 (proteasome subunit beta type-3-A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.4 bits (1017), Expect = 1.8e-106
Identity = 202/236 (85.59%), Postives = 204/236 (86.44%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

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BLAST of Clc08G05720 vs. NCBI nr
Match: XP_022141537.1 (proteasome subunit beta type-3-A [Momordica charantia])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 201/236 (85.17%), Postives = 204/236 (86.44%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQR+VYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTLYQRIVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

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BLAST of Clc08G05720 vs. NCBI nr
Match: XP_038886325.1 (proteasome subunit beta type-3-A [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.3e-106
Identity = 202/236 (85.59%), Postives = 204/236 (86.44%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCF+IASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFSIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

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BLAST of Clc08G05720 vs. NCBI nr
Match: XP_022939821.1 (proteasome subunit beta type-3-A [Cucurbita moschata] >XP_022993932.1 proteasome subunit beta type-3-A [Cucurbita maxima])

HSP 1 Score: 394.4 bits (1012), Expect = 6.7e-106
Identity = 201/236 (85.17%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

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BLAST of Clc08G05720 vs. NCBI nr
Match: XP_022991148.1 (proteasome subunit beta type-3-A-like isoform X1 [Cucurbita maxima] >XP_023523704.1 proteasome subunit beta type-3-A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105
Identity = 201/236 (85.17%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

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BLAST of Clc08G05720 vs. ExPASy Swiss-Prot
Match: Q9XI05 (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana OX=3702 GN=PBC1 PE=1 SV=2)

HSP 1 Score: 368.6 bits (945), Expect = 5.2e-101
Identity = 186/236 (78.81%), Postives = 196/236 (83.05%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD++F+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKR                     
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPY CQPVIAGL D DKPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYLCQPVIAGLGDDDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAM+KPDME EELFETISQALLSSVDRDCLSGWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 CEAMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204

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BLAST of Clc08G05720 vs. ExPASy Swiss-Prot
Match: O81153 (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana OX=3702 GN=PBC2 PE=1 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 7.5e-100
Identity = 187/236 (79.24%), Postives = 194/236 (82.20%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKR                     
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGP+ CQPVIAGL D +KPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDME EELFETISQALLSSVDRDCLSGWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 CEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD 204

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BLAST of Clc08G05720 vs. ExPASy Swiss-Prot
Match: O65084 (Proteasome subunit beta type-3 OS=Picea mariana OX=3335 GN=PBC1 PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.6e-97
Identity = 176/236 (74.58%), Postives = 194/236 (82.20%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ+I++IHDKL++GLSGL TD 
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQR  ++HKLYQLREER+M+PETFASLVSA LYEKR                     
Sbjct: 61  QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGL + DKPFICTMDSIGAKELAKDFVV+GTA+ESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLGEDDKPFICTMDSIGAKELAKDFVVAGTAAESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CE+M+KPDMEPEELFETISQALLSS+DRDCLSGWGGHVYVV+P +V ER LKGRMD
Sbjct: 181 CESMYKPDMEPEELFETISQALLSSIDRDCLSGWGGHVYVVSPNQVIERTLKGRMD 204

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BLAST of Clc08G05720 vs. ExPASy Swiss-Prot
Match: Q9LST7 (Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PBC1 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-96
Identity = 176/236 (74.58%), Postives = 195/236 (82.63%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQ++++IHDKL++GLSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLV++HKLYQLREERDMKP+TFASLVSA LYEKR                     
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGL + ++PFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLGEDNEPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CE+M+KP+MEPEELFETISQAL SSVDRDCLSGWGG V +VTPTEVKE ++KGRMD
Sbjct: 181 CESMYKPNMEPEELFETISQALQSSVDRDCLSGWGGFVLLVTPTEVKECVIKGRMD 204

[Close]

BLAST of Clc08G05720 vs. ExPASy Swiss-Prot
Match: Q9Y7T8 (Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pup3 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-63
Identity = 120/236 (50.85%), Postives = 161/236 (68.22%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSI EYNG + VAM GKNC AIASD RLGVQ  ++  +F K++ + DK +LGL+GL TD 
Sbjct: 1   MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLY+   Y+  LY+ REER ++P+TFA+LVS+ LYEKR                     
Sbjct: 61  QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYF  PV+AG+S+ + PFIC  DSIG  + A+DF+VSGTA+E LYG 
Sbjct: 121 -----------FGPYFSFPVVAGVSNDNTPFICGFDSIGCIDFAEDFIVSGTATEQLYGM 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CE++++P++EP++LFETISQALL++ DRDC+SGWG  VYV+T  +  +R++KGR D
Sbjct: 181 CESVYEPNLEPDDLFETISQALLNAQDRDCISGWGCVVYVITADKCIKRLVKGRQD 204

[Close]

BLAST of Clc08G05720 vs. ExPASy TrEMBL
Match: A0A6J1CK40 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111011884 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 201/236 (85.17%), Postives = 204/236 (86.44%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQR+VYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTLYQRIVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. ExPASy TrEMBL
Match: A0A6J1JUA3 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111489782 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106
Identity = 201/236 (85.17%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. ExPASy TrEMBL
Match: A0A6J1FGX2 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445581 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.3e-106
Identity = 201/236 (85.17%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. ExPASy TrEMBL
Match: A0A6J1JVC3 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111487832 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.6e-106
Identity = 201/236 (85.17%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. ExPASy TrEMBL
Match: A0A6J1GSE0 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111457011 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 200/236 (84.75%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR                     
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPYFCQPVIAGLSD+DKPFICTMD IGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYFCQPVIAGLSDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPD+EPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 CEAMFKPDLEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. TAIR 10
Match: AT1G21720.1 (proteasome beta subunit C1 )

HSP 1 Score: 368.6 bits (945), Expect = 3.7e-102
Identity = 186/236 (78.81%), Postives = 196/236 (83.05%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD++F+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKR                     
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGPY CQPVIAGL D DKPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPYLCQPVIAGLGDDDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAM+KPDME EELFETISQALLSSVDRDCLSGWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 CEAMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. TAIR 10
Match: AT1G77440.1 (20S proteasome beta subunit C2 )

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-101
Identity = 187/236 (79.24%), Postives = 194/236 (82.20%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKR                     
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGP+ CQPVIAGL D +KPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDME EELFETISQALLSSVDRDCLSGWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 CEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. TAIR 10
Match: AT1G77440.2 (20S proteasome beta subunit C2 )

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-101
Identity = 187/236 (79.24%), Postives = 194/236 (82.20%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIEL 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKR                     
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKR--------------------- 120

Query: 121 AMMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180
                      FGP+ CQPVIAGL D +KPFICTMDSIGAKELAKDFVVSGTASESLYGA
Sbjct: 121 -----------FGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGA 180

Query: 181 CEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 237
           CEAMFKPDME EELFETISQALLSSVDRDCLSGWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 CEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD 204

[Close]

BLAST of Clc08G05720 vs. TAIR 10
Match: AT3G60820.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 9.3e-13
Identity = 55/248 (22.18%), Postives = 100/248 (40.32%), Query Frame = 0


Query: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
           S ++ NG   VA+ G +   IA+D R+      ++ D+ KI+++ D+  L  SG   D +
Sbjct: 9   SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62  TLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIELA 121
            L + L  +H +YQ +  + M     A L+S  LY KR                      
Sbjct: 69  ALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKR---------------------- 128

Query: 122 MMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGAC 181
                     F PY+   V+ GL ++ K  + T D++G+ E    +   G+ S  +    
Sbjct: 129 ----------FFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERV-GYGAQGSGSTLIMPFL 188

Query: 182 EAMFK---PDMEPE----------ELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKE 237
           +   K   P + P+          E  + +     S+ +RD  +G    + ++    +K 
Sbjct: 189 DNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKT 223

[Close]

BLAST of Clc08G05720 vs. TAIR 10
Match: AT3G60820.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 9.3e-13
Identity = 55/248 (22.18%), Postives = 100/248 (40.32%), Query Frame = 0


Query: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
           S ++ NG   VA+ G +   IA+D R+      ++ D+ KI+++ D+  L  SG   D +
Sbjct: 9   SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62  TLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRLDNYLVFIYLFFSSLNHLIELA 121
            L + L  +H +YQ +  + M     A L+S  LY KR                      
Sbjct: 69  ALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKR---------------------- 128

Query: 122 MMKLCYNWIGFGPYFCQPVIAGLSDKDKPFICTMDSIGAKELAKDFVVSGTASESLYGAC 181
                     F PY+   V+ GL ++ K  + T D++G+ E    +   G+ S  +    
Sbjct: 129 ----------FFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERV-GYGAQGSGSTLIMPFL 188

Query: 182 EAMFK---PDMEPE----------ELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKE 237
           +   K   P + P+          E  + +     S+ +RD  +G    + ++    +K 
Sbjct: 189 DNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKT 223

The following BLAST results are available for this feature:

BLAST of Clc08G05720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551487.1	1.8e-106	85.59	proteasome subunit beta type-3-A [Cucurbita pepo subsp. pepo]	[more]
XP_022141537.1	2.3e-106	85.17	proteasome subunit beta type-3-A [Momordica charantia]	[more]
XP_038886325.1	2.3e-106	85.59	proteasome subunit beta type-3-A [Benincasa hispida]	[more]
XP_022939821.1	6.7e-106	85.17	proteasome subunit beta type-3-A [Cucurbita moschata] >XP_022993932.1 proteasome...	[more]
XP_022991148.1	1.2e-105	85.17	proteasome subunit beta type-3-A-like isoform X1 [Cucurbita maxima] >XP_02352370...	[more]

BLAST of Clc08G05720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI05	5.2e-101	78.81	Proteasome subunit beta type-3-A OS=Arabidopsis thaliana OX=3702 GN=PBC1 PE=1 SV...	[more]
O81153	7.5e-100	79.24	Proteasome subunit beta type-3-B OS=Arabidopsis thaliana OX=3702 GN=PBC2 PE=1 SV...	[more]
O65084	4.6e-97	74.58	Proteasome subunit beta type-3 OS=Picea mariana OX=3335 GN=PBC1 PE=2 SV=1	[more]
Q9LST7	1.7e-96	74.58	Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PBC1 ...	[more]
Q9Y7T8	1.1e-63	50.85	Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of Clc08G05720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CK40	1.1e-106	85.17	Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111011884 PE=3 SV=1	[more]
A0A6J1JUA3	3.3e-106	85.17	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111489782 PE=3 SV=1	[more]
A0A6J1FGX2	3.3e-106	85.17	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445581 PE=3 SV=1	[more]
A0A6J1JVC3	5.6e-106	85.17	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111487832 PE=3 SV=1	[more]
A0A6J1GSE0	1.2e-105	84.75	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111457011 PE=3 SV=1	[more]

BLAST of Clc08G05720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21720.1	3.7e-102	78.81	proteasome beta subunit C1	[more]
AT1G77440.1	5.3e-101	79.24	20S proteasome beta subunit C2	[more]
AT1G77440.2	5.3e-101	79.24	20S proteasome beta subunit C2	[more]
AT3G60820.1	9.3e-13	22.18	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G60820.3	9.3e-13	22.18	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 1..236 e-value: 2.8E-51 score: 175.9
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 5..227
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 7..106 e-value: 2.0E-19 score: 69.8 coord: 117..221 e-value: 1.6E-18 score: 66.9
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 135..230
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 4..103
None	No IPR available	PANTHER	PTHR11599:SF155	PROTEASOME SUBUNIT BETA	coord: 135..230
None	No IPR available	PANTHER	PTHR11599:SF155	PROTEASOME SUBUNIT BETA	coord: 4..103
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 12..59
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 8..221 score: 36.415436
IPR033811	Proteasome beta 3 subunit	CDD	cd03759	proteasome_beta_type_3	coord: 6..232 e-value: 4.92641E-124 score: 348.078

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G05720.2	Clc08G05720.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity