Clc08G05550 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGAGATGAGTTTCCTAGCCTCTGTGGGAGTCTTATTGACGAAGGCACCACCACTAGTTGCGTCGATGGTACTCCTATCACTAGGGACAATCCTTCATAGAAGTACTAGATCAGCAGCGCATCAGAAATTTGGTGGTTAGGAAAGTTGGTGCACAGGCATTTGAACTGCTCCCAATACTCAAATAATGTTTCGCCCACCATCTGGGAGATCTTGTAGATTTCCTTCCTTATACGTGCAACACGTGATGCAGGGAAAGAACTTCTCCAAGAACTGACTCTGCATCTCTTTCCAAGTGGTCACAGAACTAGGAGGAAGGAAGTAAAGTCAATCTTTAGCGTTCCTTTAATGAGAAAGGGAAGGCTTGAGGTTGATTTGAATTAATCACGCCATGGAGTCTCAATCCCCTCACACATGATGAACTTCTTCAGATGCTTATGGGGGGTTTCACTTGACATCCAAAAAAGGAAGGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCATTGGCTTATGATGCTCTTTTGCTGAAGAAATGTGTCCGTGTAAGTATCCTTGCTAATTGGTAGATAATAGATTTTATAATATCTCTTGGTTAGTCACCTTGGTAGAAAAGATGTAATGCATTTCTTTAATTTTTTGTTGCAGCGGGCCTTGCAGGTTCTCATTTCTGGAGCCTTTAACTGTATATGTATATTTGCTCCATTCATTGCGTTTCAAGCATATGGGTATTACAATATTTGCGGTGGACGTATACCAGATGAAATGAGGCCATGGTGCAAAGCTAGGGTACCGCTGCTATACAATTTTGTTCAAAGTCACTACTGGTATTGTCCTTTTAACTTGCCCATTATTCCAACGTTATATCAGTATTTCTGTAGACCATAGGTGACTTTTCAATTCTTTTCTAAATCTCCAGATAATCCTTTAACTATAGGTTTTCTCGTATGGAAATGCTTGAAATAGGTCAAAAATTGTAGGAACTTGTCAACAAGGAGAATCAGGTTACAAGAATCAGTAAATAATTTAACTATCAAATAAAATAACTCAATAATCCCAACTCTGGTGAGGAAAAGAAATTGAAATTTTATCACTGAAGAAAAATTTACGAAGAATGAGTCTGTCAAGACTCAATAGGATAAAGTTTCCCTTCCCCAAAGGAAGGATCATAAAGGAATCCAAATTCGTAACATTGCAAATGCAAAGTTATAGACAGCTTCCTAACATCCCCAGACAGGATGAATAGCAATCATATCCTGATGCTGCCATATTCCTCAAGGAAGTGGAGAGATTACATGGTCTAGTTCAATTATCCCTAATCGTGACAAGATATTTGTGGGACTTTTGGAATGAGTTGTTTAAGATATGAGGAATTCAACTTCAAAGAAGCACCACCTTCCATCTTGAGACAGCCTACCAATCTGAGATTGTCAACAAGTGCTAGGAGATCTATCTTAGGCATATTTGTAGTGGGCAGCCACAACAATGGGGACACTGGATTCCATGGGCCGAATGCTAGTCTAAGTTTCGGCATTTTTCTGATATCATGTAAGTTCATTTAACTTCAATATTAACGAGAAAGATTTCAATCTATTGTCAGTGAAGCTATTGAAGAAAATGATTTGTAAGAAGTTCTTTTGAAATGTTCTTTTCTTACATGCTAGAAGTACGTGATCTTGGTAAGTTGAATGGGTGGGCTACTTTGGTTGGATGTGAAGTAGAGCCATTTCCTTCTTCTTACGTGGGTCTCCATCTAAGCCACAACCCCAAGAGCATTTTGTTTCGGGATCTTAGAGACTCTTGTCTTGTAAAAGAGCTTTTTCTTGGGAGGTGGTGGATTTACTCTCATCCAATCTGTTTTGAGTGGTATACATATTTGCTTCTTATCCCTTTTTAGGTTCTCTATGTCATTGAGTAAAATTCTAGAGAAACTTATGAATGATTTCCTTTGGGAAGGGGTTGAGGAGGGGAAAGGGTTACGTTTAATCAATTGGGAGGTGGTGATGTAACCTGTGGACCTTGGGGGATTTTATTTGGGTAACTTAAGGCCTCGTAACAAAGGCCCGTTGGCTAAATGGCTTTGGCATTTTCATCATGAGTCTCAGACTTTATGGCAGAAAGTCATTGTGAGTAAGTAGAGCCACCCCATTGAATGGCTCAAGTGGGGTTAAAGGCACACGGAAACTGGTGGAAAGGTACCGATTAGGAAACTCCTTTTCCTTCTCCTTTTGTCCATTGCTCGGTGGGGGATGGGAGAGTACTTTTTTTTGGTAGGATAAATGGTTGGGGATAGACTCCTTTGCTTTGTTTCCTCCTTTATACCATTAATCTTTGGTGGGGAACCATGTGATAGTTGATGTTGTCTCATCCTATGACCTTCCCTTTGCCTTTTTTGGGGTCTAGTTGTCTTTCTTTGATTGGGGAGTTTTGTTGTATTGGGAGTGGATGTTCGTATTTGGAGTCCTAGATTGTCCGAATGTTTTTCTTGTAAATATATATCTTTTTCTTTGTGTGGTTTATCCCTCTCCCAGGAGTGGTTTTGTCTTTGTCTCATCATGGAAAGTGAAAAATTTCCAAGAAGGTTAAGTTTTTTTGTGTTGTATGTTTTCCATAGAAGAGTTAACACCTTGGTTCAGGTGTCAAGGAAGTTGGCTAATTTGATGGGTCTTGACCATATTCTTTGGAGCTGTGATCTAGCGTAGGCTGTTTAGAGTTGTTTCTATGAAAAGTTTCGTTTATGCTAGACTAGGCATAGAGGTTGCAACATGATGATTGAGGAGTTTCATCTCCATTCTTCCTTTCGTGAGATTGTAAGGTTTTTGTGGTGAGTCGAGGTGTGTGGTTTTGTGGGACTTTTGGGGGGTGAAGAACAAAGCTTAAGCGGCTTGGCTCTCCCACCACAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCAAACAATGGTATCAGAGCCAAGTTGTTGACGTTCCGGAGTGGAACCGGCGGAGGGTTCTGACTAGGTTTGGCCGAGTGAAGTACCGTCGAAGTAGCCACCGGGATGTTGGCTTTCCAAGGATGGGGTATTGTTAGGAACCAAGGTAGTATGGGCTACCTTTGTCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCCCACCACAATAGCTAGCTTTTGGCAGTTTTGTTCGTTGTTAGTTTTAATGTTTCTTCATAGGCCTCTATTTGTGAAACCTTTATATAATTACCCTTTAGGTCTATTTTTATTTGATTGGAGACCCTTGTTTTAAAGTCTCTCCTTCTTTCAAGGGCTTTATTTTTGTATGCCCTTGTATAATTTCATTATATATATAATACAACTTTGTGTTTTTTTGTTGCACACTCAAATTGGAATTTGGATCTATTTAATTTAAGACACGTGTAGTTTTCCAAGAAGCAGGCGCAGAAAAAGAAAGCTTATGGAATTAATTGATTTTCAATTGGGAAATATTATTTGATTTTCAGTATTCTTTACAAAGTATTGTGAAAAGACAACATGTTAGGAATGTTTGTTTCAGGAAATGGATTATCAACCTGTTTTTAGATTTTGCATTATTTATATTCTAATTGACATTGCTATGTGCTTTTTTGAACATCTTACATGCATCTTTTGGGATGGCAGGGGAGTAGGTTTCTTAAGATATTTCCGATTCGAACAGCTACCAAACTTTCTACTTGCATCCCCAATTTTGTCTTTGGCTTTTTTCTCAATTGTTCACTACGGAAAGTCAAAGACAAAGCTTTTATTCTCAGTGGGCTTCCAAGCTACGGCTGATGATAGAAATTCTGCTGCCATGCTTTACTTTCCAGAAAGTATTTCAAGGTCAAGCATACCTCATCCTACAGTGGCATCTTCCTCTGGGATACAAGGTACTGCTTATTAAGTAATGGCAATGCAACAAGATTTGTGTTTGTCTGAGTGGGTAGAAGTTTTGAATTGGAGTAATTTCTTGACTTTCCCTATCACTGTGTTTTGTTGCAATTTTGGATGCACCTTAAGCTATTATTTCATAGGAAATCAGAATCTTAGACGAAGAAAGAAGATTATTGAACAGGATCCTGCTGAGCTTCCAGTAGAGGATGAACCATCCAAGGAGTCAGGATACTTTTCTGCTCTTGTTCTTCCATTTATCCTACACATGGGATTTATGGCTGCCACAGCATTTTTTATCATGCATGTACAGGTTTGGCTCCTCTCTAGAATTTGTACTTCTTTCAAAATATATATCCATAGTGTGTGTTGGATAATAATTGTTTAAAATAAAAACTCTAATGACTTTCAAAATCCATTTTAAGTGGTTGCCAAATACTTGTATTTTTTTCAAAATGATTTATTTTTTAAATTAAACACTTGAATTACAAAAACACCCTTAAACAATAGAATTAATTTATGCTTTCAACATTTTAGAAGAGTTAAAACTGGTCTCGTAGCTTTAAGCCTTTCAAAGGCTGAAGAAGTGAGGCCTACTACTTGAGAAGGTAGGAGGAAAAGCCTTAATTCTAAATTTATATATACATTAATGGAATCTTTAAATGTAAAGCCGATTTTTTTTAAAAAGGAGATCTCTTTTGCGTTTACCTAGTTACTTTGTTCTTAAGGTCATATTTATATATATATGTTTAATAAAGACAACAACCAACGGCAAACATTATTTATATATATATGTTTAATAAAGACAACAACCAACGGCAAACATCACAACCAGCGAGTCCCTAACATCATTGTCATTGGGGAGATACTATATGGAAAAACGTATTTCCAAAAATGCTAAAACAGAATAGACAATGTTTTTACATAATTCATGTTGTATTAATATTATATAGTTAGACTTCTATATTATAAAGAATAGGACTATTTTTACATTATTCTTCTTCACTGAGCTTTTGTACAATTGGCATAAGCCTCTTCTTAGGAGCATCAAACTTAATTTTCCAAAACAGAAACCAAAACTAAATGGTTACCCAATGGAGCCTAAGTTATTCAATCCCTAGCACAATGAATCTATGAAAATATTCTACATCTCATGTCTTTTTAAGCTTAGTATCTCACAGTTCGAAACTCGACAGGTTGCAACACGATTTCTCTCTGCAAGCCCTCCTCTGTATTGGTTTGCCTCATACATTACAGTTTCTCCCCATCGCTTTAAGAGATGGGGATATATTATCTGGGCGTACTCTGTTGCTTATATCCTCCTTGGCAGTCTGCTCTTTTCAAATTTCTACCCTTTCACATGA atggtggagatgagtttcctagcctctgtgggagtcttattgacgaaggcaccaccactagttgcgtcgatgatttccttccttatacgtgcaacacgtgatgcagggaaagaacttctccaagaactgactctgcatctctttccaagtggtcacagaactaggaggaaggaagtaaagtcaatctttagcgttcctttaatgagaaagggaaggcttgagcgggccttgcaggttctcatttctggagcctttaactgtatatgtatatttgctccattcattgcgtttcaagcatatgggtattacaatatttgcggtggacgtataccagatgaaatgaggccatggtgcaaagctagggtaccgctgctatacaattttgttcaaagtcactactggggagtaggtttcttaagatatttccgattcgaacagctaccaaactttctacttgcatccccaattttgtctttggcttttttctcaattgttcactacggaaagtcaaagacaaagcttttattctcagtgggcttccaagctacggctgatgatagaaattctgctgccatgctttactttccagaaagtatttcaaggtcaagcatacctcatcctacagtggcatcttcctctgggatacaaggaaatcagaatcttagacgaagaaagaagattattgaacaggatcctgctgagcttccagtagaggatgaaccatccaaggagtcaggatacttttctgctcttgttcttccatttatcctacacatgggatttatggctgccacagcattttttatcatgcatgtacagGTTGCAACACGATTTCTCTCTGCAAGCCCTCCTCTGTATTGGTTTGCCTCATACATTACAGTTTCTCCCCATCGCTTTAAGAGATGGGGATATATTATCTGGGCGTACTCTGTTGCTTATATCCTCCTTGGCAGTCTGCTCTTTTCAAATTTCTACCCTTTCACATGA ATGGTGGAGATGAGTTTCCTAGCCTCTGTGGGAGTCTTATTGACGAAGGCACCACCACTAGTTGCGTCGATGATTTCCTTCCTTATACGTGCAACACGTGATGCAGGGAAAGAACTTCTCCAAGAACTGACTCTGCATCTCTTTCCAAGTGGTCACAGAACTAGGAGGAAGGAAGTAAAGTCAATCTTTAGCGTTCCTTTAATGAGAAAGGGAAGGCTTGAGCGGGCCTTGCAGGTTCTCATTTCTGGAGCCTTTAACTGTATATGTATATTTGCTCCATTCATTGCGTTTCAAGCATATGGGTATTACAATATTTGCGGTGGACGTATACCAGATGAAATGAGGCCATGGTGCAAAGCTAGGGTACCGCTGCTATACAATTTTGTTCAAAGTCACTACTGGGGAGTAGGTTTCTTAAGATATTTCCGATTCGAACAGCTACCAAACTTTCTACTTGCATCCCCAATTTTGTCTTTGGCTTTTTTCTCAATTGTTCACTACGGAAAGTCAAAGACAAAGCTTTTATTCTCAGTGGGCTTCCAAGCTACGGCTGATGATAGAAATTCTGCTGCCATGCTTTACTTTCCAGAAAGTATTTCAAGGTCAAGCATACCTCATCCTACAGTGGCATCTTCCTCTGGGATACAAGGAAATCAGAATCTTAGACGAAGAAAGAAGATTATTGAACAGGATCCTGCTGAGCTTCCAGTAGAGGATGAACCATCCAAGGAGTCAGGATACTTTTCTGCTCTTGTTCTTCCATTTATCCTACACATGGGATTTATGGCTGCCACAGCATTTTTTATCATGCATGTACAGGTTGCAACACGATTTCTCTCTGCAAGCCCTCCTCTGTATTGGTTTGCCTCATACATTACAGTTTCTCCCCATCGCTTTAAGAGATGGGGATATATTATCTGGGCGTACTCTGTTGCTTATATCCTCCTTGGCAGTCTGCTCTTTTCAAATTTCTACCCTTTCACATGA MVEMSFLASVGVLLTKAPPLVASMISFLIRATRDAGKELLQELTLHLFPSGHRTRRKEVKSIFSVPLMRKGRLERALQVLISGAFNCICIFAPFIAFQAYGYYNICGGRIPDEMRPWCKARVPLLYNFVQSHYWGVGFLRYFRFEQLPNFLLASPILSLAFFSIVHYGKSKTKLLFSVGFQATADDRNSAAMLYFPESISRSSIPHPTVASSSGIQGNQNLRRRKKIIEQDPAELPVEDEPSKESGYFSALVLPFILHMGFMAATAFFIMHVQVATRFLSASPPLYWFASYITVSPHRFKRWGYIIWAYSVAYILLGSLLFSNFYPFT Homology
BLAST of Clc08G05550 vs. NCBI nr
Match: XP_038880618.1 (GPI mannosyltransferase 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 482.6 bits (1241), Expect = 2.6e-132 Identity = 237/262 (90.46%), Postives = 246/262 (93.89%), Query Frame = 0
BLAST of Clc08G05550 vs. NCBI nr
Match: XP_038880620.1 (GPI mannosyltransferase 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-130 Identity = 232/256 (90.62%), Postives = 243/256 (94.92%), Query Frame = 0
BLAST of Clc08G05550 vs. NCBI nr
Match: XP_008451101.1 (PREDICTED: GPI mannosyltransferase 2 [Cucumis melo] >KAA0042228.1 GPI mannosyltransferase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 458.8 bits (1179), Expect = 4.0e-125 Identity = 227/262 (86.64%), Postives = 239/262 (91.22%), Query Frame = 0
BLAST of Clc08G05550 vs. NCBI nr
Match: XP_022960967.1 (GPI mannosyltransferase 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122 Identity = 218/262 (83.21%), Postives = 237/262 (90.46%), Query Frame = 0
BLAST of Clc08G05550 vs. NCBI nr
Match: XP_023516167.1 (GPI mannosyltransferase 2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.1 bits (1154), Expect = 3.2e-122 Identity = 218/262 (83.21%), Postives = 236/262 (90.08%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy Swiss-Prot
Match: Q5KR61 (GPI mannosyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Pigv PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16 Identity = 66/241 (27.39%), Postives = 99/241 (41.08%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy Swiss-Prot
Match: Q9V7W1 (GPI mannosyltransferase 2 OS=Drosophila melanogaster OX=7227 GN=PIG-V PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.2e-16 Identity = 63/220 (28.64%), Postives = 97/220 (44.09%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy Swiss-Prot
Match: Q7TPN3 (GPI mannosyltransferase 2 OS=Mus musculus OX=10090 GN=Pigv PE=2 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 2.1e-15 Identity = 62/237 (26.16%), Postives = 95/237 (40.08%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy Swiss-Prot
Match: Q290J8 (GPI mannosyltransferase 2 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA19757 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.6e-15 Identity = 60/217 (27.65%), Postives = 95/217 (43.78%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy Swiss-Prot
Match: Q9NUD9 (GPI mannosyltransferase 2 OS=Homo sapiens OX=9606 GN=PIGV PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.3e-14 Identity = 61/241 (25.31%), Postives = 99/241 (41.08%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy TrEMBL
Match: A0A5A7THD6 (GPI mannosyltransferase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00010 PE=3 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 2.0e-125 Identity = 227/262 (86.64%), Postives = 239/262 (91.22%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy TrEMBL
Match: A0A1S3BQT5 (GPI mannosyltransferase 2 OS=Cucumis melo OX=3656 GN=LOC103492481 PE=3 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 2.0e-125 Identity = 227/262 (86.64%), Postives = 239/262 (91.22%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy TrEMBL
Match: A0A6J1H8V4 (GPI mannosyltransferase 2 OS=Cucurbita moschata OX=3662 GN=LOC111461609 PE=3 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 5.3e-123 Identity = 218/262 (83.21%), Postives = 237/262 (90.46%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy TrEMBL
Match: A0A6J1JC37 (GPI mannosyltransferase 2 OS=Cucurbita maxima OX=3661 GN=LOC111485434 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.8e-121 Identity = 216/262 (82.44%), Postives = 237/262 (90.46%), Query Frame = 0
BLAST of Clc08G05550 vs. ExPASy TrEMBL
Match: A0A6J1DW99 (GPI mannosyltransferase 2 OS=Momordica charantia OX=3673 GN=LOC111024082 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.8e-121 Identity = 215/254 (84.65%), Postives = 231/254 (90.94%), Query Frame = 0
BLAST of Clc08G05550 vs. TAIR 10
Match: AT1G11880.1 (transferases, transferring hexosyl groups ) HSP 1 Score: 307.4 bits (786), Expect = 1.4e-83 Identity = 159/262 (60.69%), Postives = 193/262 (73.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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