Clc08G05500 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G05500
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	ClcChr08: 16646972 .. 16649463 (-)
RNA-Seq Expression	Clc08G05500
Synteny	Clc08G05500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAGAAATCCCCTCAAGGACTTAAACGACGGCGTTTTAGTCTCCCTGTCTCTCTCGCTATGCACTGCCACTGCGTGGATTAGAGCATTTCCTCAGTCTCCAACTCAAGAATGCTTCCCTCTCTCATTTCCCCTTACCAATCCACCACTTTCCCCTACCACTTTCACTCTCTCTATTCCATCAATCTTCTTCTTCCCAAAACCCTTTTCCCTGGTTTTCCATCCCAAGCCAAAAATGCCCTCAAAACCTTCCTCCATTTCCACAAAACAAGATCCAAGAAATCCTTCTACAACACCTTCCATTCCCCTTCCACCACTCACGCTTCTCTCATCGAGGCTCCTATTTTGTGGGCTGGTAGACTTTGCATCTTCTATGCCCTTCTAAGAGCTGGTCTTGCTGGATCTCAATCTAACCCACTTGTCTCTGGTTTGTCTTCTTTCTGATTTTCTTGCCTTTTCAATGTTCTTTTCCTTTTCTGATTCTGGGTTCTGGTTTTTATTGGGAAATTTTGTGTTTGTGCTTTTTTTGTTCTTCCTTTCCAGATTTGGACTTATCCTATGGTGGTAGTGCTGTTGGGGAAAGCAGCAGTGACTTGGGGTTTTCTAAGTGGTTGGAGAGTGTAAGAGGAAAGCCAGGTTTGTGGGCGATCTTAAACTTGCTTGATTTGTGGGTTATGCAGTTGGATTTTATGATCATACCAAACTGAGCATAATCTGTTTGATCACTACCATTAACTGCATTCCTTTTCAAACAAAAAAAAATCAATACCATTAACTGCAAAGAATACATTGATCAACATTGCCTTTTGTTTTGATTTTGAATTGAAGTGACTAAATTCTACAAATTATATGGCTGAAACTCCAATAATCATTAGCTATATAGTTGACATTGAAAGATTTCTTTTGTTTGATAGGGTACAAAAGATTAATAGAAAATGTTTTAGCAGTTAAGTTATGATTGTATAACATTGCTGGAAGTAATTGTTTAGTCCGATGTTATACAGATTTTAGTGGGTTTAGTCTTGTATTTCTTGTATTATATTAGCAAGTTTGAGTTTTATGTTGATGTAATCAACTTTTGGTGTTTGGGGTTCACTCCTGCTTTCAGTTATCAATGAAATTGTTTCTTTTACCAAAGAAAAAGTTTGAGTTTTATGCTTTGTTTCCTCTTCTATACTTCGAGCATTAGTCTCATTGTTTCATTAATTCAATGCAAAATCTTGATTGCTAATACTTCTAGACTTTGTTAAGCCTTTTTTCTGTTGAATCTTGAATGCTTGGGCTGGAAGCTAAACTTTGCAACTCTATTTAATGGGGATCTCTTGTGTAGAGTTTCCCTTTTGTAATATAATTGTATCCTACAAAAGAAAAAAGTCTTGAATGCTAGGCCTGGCAGATCATCTATTATTCTTAATGATCTTTGTGAATGCTCTATAGTTGTTCCATGTTTATTACATTCTTGCAGCTGCCATTTGAACCCTGCTTACAATATTATGTTTAATTTGATTCTAGACTTTAGTGTGCTAATTTGCTGGTATTCTTTGATTCTGTTCTTTGCACCTTATAGTAGCTCTGTTGAATTGAATAATTTAGCTAGATTATAGTTCGTATGTGAAACTAAAGGGTGTGGCCTAAGTTCATGATCTTCAAACACAATTAAAACCTTTTCAGTATTTTCTTTCCTCAACATCTGGAATTGGCAGTGTATGAATGTTTTACTTGTGTTTATTGACAGTGGATGAAGCAGTTGACAAAAGGAAACTAGTGAGCAAATGGCATCCTACCACAAAGGGAACCCTCAGAAGAAACTATCGGGTGCCTTCAAAATCTGAAGGACGACGTCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCGTTGATGCCACATCCCACAAGGTTCTAAATCTAATAACAACCCTAGAATTCATTCCTTCATTTCCATTTCATATCATGCCTGGTATCCATCCTGTTCACTCTTCACACACGAAAACCCTTCCTTTTTTGTTCCACTTCATGATTATTCTCGTAAGACATCACGATGTAGAGGTTTGTCATTTGTAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGTTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACCCCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATGAAAATGATTACACAAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGTCCTTCTGTTTGAGATTATTTCTAAATCTCTATGTATTATTATATCTCAACTTTTCTCTGTACAGTGTTTGAAAGATGAAACTAATCAATCTTGAATCTTGATGGAGACGTCACTTTTAGAAGAATGTCTCAGTGTGAAATGTTTCTTAGAGATATTTAACAAAGTTTCTAGCAGTTGCTTAAACTGATGGGGACTCAATGGAACTAGAAGTACAAACCATTTTCTCTGGTT

mRNA sequence

AAAAAAAAAAGAAATCCCCTCAAGGACTTAAACGACGGCGTTTTAGTCTCCCTGTCTCTCTCGCTATGCACTGCCACTGCGTGGATTAGAGCATTTCCTCAGTCTCCAACTCAAGAATGCTTCCCTCTCTCATTTCCCCTTACCAATCCACCACTTTCCCCTACCACTTTCACTCTCTCTATTCCATCAATCTTCTTCTTCCCAAAACCCTTTTCCCTGGTTTTCCATCCCAAGCCAAAAATGCCCTCAAAACCTTCCTCCATTTCCACAAAACAAGATCCAAGAAATCCTTCTACAACACCTTCCATTCCCCTTCCACCACTCACGCTTCTCTCATCGAGGCTCCTATTTTGTGGGCTGGTAGACTTTGCATCTTCTATGCCCTTCTAAGAGCTGGTCTTGCTGGATCTCAATCTAACCCACTTGTCTCTGATTTGGACTTATCCTATGGTGGTAGTGCTGTTGGGGAAAGCAGCAGTGACTTGGGGTTTTCTAAGTGGTTGGAGAGTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGACAAAAGGAAACTAGTGAGCAAATGGCATCCTACCACAAAGGGAACCCTCAGAAGAAACTATCGGGTGCCTTCAAAATCTGAAGGACGACGTCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCGTTGATGCCACATCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGTTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACCCCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATGAAAATGATTACACAAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGTCCTTCTGTTTGAGATTATTTCTAAATCTCTATGTATTATTATATCTCAACTTTTCTCTGTACAGTGTTTGAAAGATGAAACTAATCAATCTTGAATCTTGATGGAGACGTCACTTTTAGAAGAATGTCTCAGTGTGAAATGTTTCTTAGAGATATTTAACAAAGTTTCTAGCAGTTGCTTAAACTGATGGGGACTCAATGGAACTAGAAGTACAAACCATTTTCTCTGGTT

Coding sequence (CDS)

ATGCTTCCCTCTCTCATTTCCCCTTACCAATCCACCACTTTCCCCTACCACTTTCACTCTCTCTATTCCATCAATCTTCTTCTTCCCAAAACCCTTTTCCCTGGTTTTCCATCCCAAGCCAAAAATGCCCTCAAAACCTTCCTCCATTTCCACAAAACAAGATCCAAGAAATCCTTCTACAACACCTTCCATTCCCCTTCCACCACTCACGCTTCTCTCATCGAGGCTCCTATTTTGTGGGCTGGTAGACTTTGCATCTTCTATGCCCTTCTAAGAGCTGGTCTTGCTGGATCTCAATCTAACCCACTTGTCTCTGATTTGGACTTATCCTATGGTGGTAGTGCTGTTGGGGAAAGCAGCAGTGACTTGGGGTTTTCTAAGTGGTTGGAGAGTGTAAGAGGAAAGCCAGTGGATGAAGCAGTTGACAAAAGGAAACTAGTGAGCAAATGGCATCCTACCACAAAGGGAACCCTCAGAAGAAACTATCGGGTGCCTTCAAAATCTGAAGGACGACGTCTTCTTAAAGCCATCGCATCCCTCCTTTCCGATGACGATCACTTCGTTGATGCCACATCCCACAAGGGTTGTCAAATCAGGAGGGAAAGTGCTCATGGGGAGAGTGTTTGTTGCAACAATGTGAGAGCTTTGTTTGATGAGCTTCCAACCCCACATCTTATTGTGGAAATAACTCCATTCCCTGCTGGGCCTCTCAATGAAAATGATTACACAAAGGCTGAGAAACTAGAGAGAGTGCTCAGATCTGGTCCTTCTGTTTGA

Protein sequence

MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFYNTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESSSDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNENDYTKAEKLERVLRSGPSV

Homology

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BLAST of Clc08G05500 vs. NCBI nr
Match: XP_038878616.1 (uncharacterized protein LOC120070805 [Benincasa hispida])

HSP 1 Score: 501.5 bits (1290), Expect = 4.3e-138
Identity = 247/258 (95.74%), Postives = 254/258 (98.45%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           MLPSLISPYQSTTFP+ FHSL+SINLLLPKTLFPGFP+QAKNALKTFLHFHKTRS KSF 
Sbjct: 1   MLPSLISPYQSTTFPFQFHSLHSINLLLPKTLFPGFPTQAKNALKTFLHFHKTRSNKSFS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           +TF+SPS+THASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSA GESS
Sbjct: 61  STFNSPSSTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSADGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHF+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. NCBI nr
Match: KAA0042229.1 (uncharacterized protein E6C27_scaffold824G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133
Identity = 241/258 (93.41%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+TFP+HFHSL SINLLLPKTLFPGFPS  KNAL+TFLHFHKTRS KS  
Sbjct: 1   MLHSLISPSQSSTFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+SDLDLSYGGS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. NCBI nr
Match: XP_008451102.1 (PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo])

HSP 1 Score: 485.7 bits (1249), Expect = 2.4e-133
Identity = 241/258 (93.41%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+TFP+HFHSL SINLLLPKTLFPGFPS  KNAL+TFLHFHKTRS KS  
Sbjct: 1   MLYSLISPSQSSTFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+SDLDLSYGGS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. NCBI nr
Match: XP_004149017.1 (uncharacterized protein LOC101215704 [Cucumis sativus] >KGN66420.1 hypothetical protein Csa_007066 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132
Identity = 239/258 (92.64%), Postives = 246/258 (95.35%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+TFP+HFHSL SINLLLPK+LFPGFPS  KNAL TFLHFHKTRS KS  
Sbjct: 1   MLHSLISPSQSSTFPFHFHSLNSINLLLPKSLFPGFPSHPKNALTTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+SDLDLSYGGS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI SL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIMSL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. NCBI nr
Match: TYK14259.1 (uncharacterized protein E5676_scaffold1121G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-126
Identity = 233/258 (90.31%), Postives = 240/258 (93.02%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+ FP+HFHSL SINLLLPKTLFPGFPS  KNAL+TFLHFHKTRS KS  
Sbjct: 1   MLHSLISPSQSSIFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+S       GS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLIS-------GSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 251

[Close]

BLAST of Clc08G05500 vs. ExPASy TrEMBL
Match: A0A5A7TLK8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00020 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 9.0e-134
Identity = 241/258 (93.41%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+TFP+HFHSL SINLLLPKTLFPGFPS  KNAL+TFLHFHKTRS KS  
Sbjct: 1   MLHSLISPSQSSTFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+SDLDLSYGGS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. ExPASy TrEMBL
Match: A0A1S3BQQ9 (uncharacterized protein LOC103492482 OS=Cucumis melo OX=3656 GN=LOC103492482 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.2e-133
Identity = 241/258 (93.41%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+TFP+HFHSL SINLLLPKTLFPGFPS  KNAL+TFLHFHKTRS KS  
Sbjct: 1   MLYSLISPSQSSTFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+SDLDLSYGGS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. ExPASy TrEMBL
Match: A0A0A0LX12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G604060 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 239/258 (92.64%), Postives = 246/258 (95.35%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+TFP+HFHSL SINLLLPK+LFPGFPS  KNAL TFLHFHKTRS KS  
Sbjct: 1   MLHSLISPSQSSTFPFHFHSLNSINLLLPKSLFPGFPSHPKNALTTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+SDLDLSYGGS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLISDLDLSYGGSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAI SL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIMSL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 258

[Close]

BLAST of Clc08G05500 vs. ExPASy TrEMBL
Match: A0A5D3CVI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00510 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126
Identity = 233/258 (90.31%), Postives = 240/258 (93.02%), Query Frame = 0


Query: 1   MLPSLISPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFY 60
           ML SLISP QS+ FP+HFHSL SINLLLPKTLFPGFPS  KNAL+TFLHFHKTRS KS  
Sbjct: 1   MLHSLISPSQSSIFPFHFHSLNSINLLLPKTLFPGFPSHPKNALRTFLHFHKTRSNKSLS 60

Query: 61  NTFHSPSTTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESS 120
           NTF+SPS+T ASLIEAPILWAGRLCIFYALLRAGLAGSQSNPL+S       GS+ GESS
Sbjct: 61  NTFNSPSSTRASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLIS-------GSSDGESS 120

Query: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180
           SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL
Sbjct: 121 SDLGFSKWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASL 180

Query: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240
           LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN
Sbjct: 181 LSDDDHFVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNEN 240

Query: 241 DYTKAEKLERVLRSGPSV 259
           DYTKAEKLERVLRSGPSV
Sbjct: 241 DYTKAEKLERVLRSGPSV 251

[Close]

BLAST of Clc08G05500 vs. ExPASy TrEMBL
Match: A0A6J1DW78 (uncharacterized protein LOC111024066 OS=Momordica charantia OX=3673 GN=LOC111024066 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.8e-121
Identity = 219/252 (86.90%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 7   SPYQSTTFPYHFHSLYSINLLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFYNTFHSP 66
           SPYQ T FP+HFHSL+SIN LLP+TLFP F ++  N LK FLHFH+T SKKS ++TF S 
Sbjct: 12  SPYQYTAFPFHFHSLHSIN-LLPRTLFPAFGTEPTNTLKAFLHFHQT-SKKSHFSTFTSL 71

Query: 67  STTHASLIEAPILWAGRLCIFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESSSDLGFS 126
           +TT ASLIEAPILWAGR+CIFYALLRAG AGSQSNPLVSDLD+SYGG A GES SDLGFS
Sbjct: 72  TTTRASLIEAPILWAGRICIFYALLRAGFAGSQSNPLVSDLDVSYGGGAAGESGSDLGFS 131

Query: 127 KWLESVRGKPVDEAVDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDH 186
           KWLESVRGKPVDEA DKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDH
Sbjct: 132 KWLESVRGKPVDEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDH 191

Query: 187 FVDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNENDYTKAE 246
           F+DATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLN+ DYTKAE
Sbjct: 192 FIDATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLNQKDYTKAE 251

Query: 247 KLERVLRSGPSV 259
           KLERVLRSGPSV
Sbjct: 252 KLERVLRSGPSV 261

[Close]

BLAST of Clc08G05500 vs. TAIR 10
Match: AT3G32930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 312.8 bits (800), Expect = 2.6e-85
Identity = 159/234 (67.95%), Postives = 184/234 (78.63%), Query Frame = 0


Query: 26  LLLPKTLFPGFPSQAKNALKTFLHFHKTRSKKSFYNTFHSPSTTHASLIEAPILWAGRLC 85
           LLL K++FPG    +K  L     + K  S  S          T ASL+E PILWAGR+C
Sbjct: 31  LLLQKSIFPG----SKLTLHRIFRYPKKISNGS----------TRASLLETPILWAGRIC 90

Query: 86  IFYALLRAGLAGSQSNPLVSDLDLSYGGSAVGESSSDLGFSKWLESVRG-KPVDEAVDKR 145
           +FYAL++AG AGS+SNP+VS LD   G     +  +DLGFSKWL++++G KP  +A DKR
Sbjct: 91  VFYALVKAGFAGSKSNPIVSGLDTG-GVDVEYDDGADLGFSKWLQNIKGNKPDKDAADKR 150

Query: 146 KLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFVDATSHKGCQIRRESAH 205
           KLVSKWHPTTKGTLRRNYR+PSK+EG RLLKAIASLLSDDDHF DATSHKGCQIRRESAH
Sbjct: 151 KLVSKWHPTTKGTLRRNYRIPSKAEGNRLLKAIASLLSDDDHFRDATSHKGCQIRRESAH 210

Query: 206 GESVCCNNVRALFDELPTPHLIVEITPFPAGPLNENDYTKAEKLERVLRSGPSV 259
           G+SVCCNNVRALFDELPTPHL+VEITPFPAGPL ENDY KAEKLER+LRSG ++
Sbjct: 211 GQSVCCNNVRALFDELPTPHLVVEITPFPAGPLTENDYLKAEKLERILRSGANI 249

The following BLAST results are available for this feature:

BLAST of Clc08G05500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878616.1	4.3e-138	95.74	uncharacterized protein LOC120070805 [Benincasa hispida]	[more]
KAA0042229.1	1.9e-133	93.41	uncharacterized protein E6C27_scaffold824G00020 [Cucumis melo var. makuwa]	[more]
XP_008451102.1	2.4e-133	93.41	PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo]	[more]
XP_004149017.1	4.6e-132	92.64	uncharacterized protein LOC101215704 [Cucumis sativus] >KGN66420.1 hypothetical ...	[more]
TYK14259.1	2.2e-126	90.31	uncharacterized protein E5676_scaffold1121G00510 [Cucumis melo var. makuwa]	[more]

BLAST of Clc08G05500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc08G05500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLK8	9.0e-134	93.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BQQ9	1.2e-133	93.41	uncharacterized protein LOC103492482 OS=Cucumis melo OX=3656 GN=LOC103492482 PE=...	[more]
A0A0A0LX12	2.2e-132	92.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G604060 PE=4 SV=1	[more]
A0A5D3CVI9	1.1e-126	90.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DW78	8.8e-121	86.90	uncharacterized protein LOC111024066 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Clc08G05500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G32930.1	2.6e-85	67.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37229	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	coord: 22..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G05500.1	Clc08G05500.1	mRNA