Clc08G05070 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G05070
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Location	ClcChr08: 15522888 .. 15523896 (-)
RNA-Seq Expression	Clc08G05070
Synteny	Clc08G05070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAATTAGAAAAGAAGAAGACGAGGTGTCCGTGATGTAGACTACGCATTCTCTACCACGCGCCTGGTGTCACTATCATTACCCAAACTCTCTCTTTCTCTCTCTAACTTTCTCTCTCTACTTTGTCCCCTTTATATATCCCTCTTCTCCGCTCTGCCGCCGCACCTTCATCTCTCACCTCTCCATATTCCCCCCTTTCTCTTCCCCCACATCACCCATTTCCATGGACAATCGTTCCTCAAACAAACGCCTCCGAGTCGACTCACCCCACTCCGAATCCGACTCTCCCGAGGTCAAACGTCTCCGAGAAGACCTCCTCGGCCTTCTCGACGACGCCGACCCCGATCCCACCCTTCAAGATCTCGATTCCGTCATCCAGAGTTTTGCAGACGAGATTTCCCCCGTCTCCTCGGCCACCCCCGCTGACTCCTTGCCGGAGCTCGGGTACCTTCTTCTAGCCTCCGACGATGAGCTCGGTCTCCCCCCCTCCGACGCCTCCACAAGCCACGGAGGCGAAACGGAGGTGGGTGAACTGACACGGGCGTCGTCGGAGTCGTCTGGCATCGGAGAGATTTGGGGATTTGAAGATGCGGTTCCCAATTACGAGGCGTTCGAGTTGGGGGAAGGAGAGAGATTTTACAATGATACAGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCTGTTTTCTCGTGACGGCGAAGTAGGAGGAAAGAGACAGAGAAAGAGAAAAAAAGAAAAAAAATTACTTTTTATCTCTGAAATGAATATAAAACCAACGACAACTCATTTGTAAATTTTTATTTTTATTTTTTTTTCTCATTAATCCCATCAAAGGAAAAGAAAATAGAAGTAGGTTGATTTAAAAACGTCTTACATTAATTATTATTATTATTATTATTACACATAAAACTATTTATTATCAAACATAATGAGGATTGGACTCAACCTGTGGTCCTGAAATTTTTATGTCCCCAATATATTCTTTTTCTTTT

mRNA sequence

AATAAATTAGAAAAGAAGAAGACGAGGTGTCCGTGATGTAGACTACGCATTCTCTACCACGCGCCTGGTGTCACTATCATTACCCAAACTCTCTCTTTCTCTCTCTAACTTTCTCTCTCTACTTTGTCCCCTTTATATATCCCTCTTCTCCGCTCTGCCGCCGCACCTTCATCTCTCACCTCTCCATATTCCCCCCTTTCTCTTCCCCCACATCACCCATTTCCATGGACAATCGTTCCTCAAACAAACGCCTCCGAGTCGACTCACCCCACTCCGAATCCGACTCTCCCGAGGTCAAACGTCTCCGAGAAGACCTCCTCGGCCTTCTCGACGACGCCGACCCCGATCCCACCCTTCAAGATCTCGATTCCGTCATCCAGAGTTTTGCAGACGAGATTTCCCCCGTCTCCTCGGCCACCCCCGCTGACTCCTTGCCGGAGCTCGGGTACCTTCTTCTAGCCTCCGACGATGAGCTCGGTCTCCCCCCCTCCGACGCCTCCACAAGCCACGGAGGCGAAACGGAGGTGGGTGAACTGACACGGGCGTCGTCGGAGTCGTCTGGCATCGGAGAGATTTGGGGATTTGAAGATGCGGTTCCCAATTACGAGGCGTTCGAGTTGGGGGAAGGAGAGAGATTTTACAATGATACAGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCTGTTTTCTCGTGACGGCGAAGTAGGAGGAAAGAGACAGAGAAAGAGAAAAAAAGAAAAAAAATTACTTTTTATCTCTGAAATGAATATAAAACCAACGACAACTCATTTGTAAATTTTTATTTTTATTTTTTTTTCTCATTAATCCCATCAAAGGAAAAGAAAATAGAAGTAGGTTGATTTAAAAACGTCTTACATTAATTATTATTATTATTATTATTACACATAAAACTATTTATTATCAAACATAATGAGGATTGGACTCAACCTGTGGTCCTGAAATTTTTATGTCCCCAATATATTCTTTTTCTTTT

Coding sequence (CDS)

ATGGACAATCGTTCCTCAAACAAACGCCTCCGAGTCGACTCACCCCACTCCGAATCCGACTCTCCCGAGGTCAAACGTCTCCGAGAAGACCTCCTCGGCCTTCTCGACGACGCCGACCCCGATCCCACCCTTCAAGATCTCGATTCCGTCATCCAGAGTTTTGCAGACGAGATTTCCCCCGTCTCCTCGGCCACCCCCGCTGACTCCTTGCCGGAGCTCGGGTACCTTCTTCTAGCCTCCGACGATGAGCTCGGTCTCCCCCCCTCCGACGCCTCCACAAGCCACGGAGGCGAAACGGAGGTGGGTGAACTGACACGGGCGTCGTCGGAGTCGTCTGGCATCGGAGAGATTTGGGGATTTGAAGATGCGGTTCCCAATTACGAGGCGTTCGAGTTGGGGGAAGGAGAGAGATTTTACAATGATACAGAATATGTGGCGTTTGATGGACTGTTTGAACATTCCGATGTGTACTCTGTTTTCTCGTGA

Protein sequence

MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISPVSSATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIGEIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS

Homology

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BLAST of Clc08G05070 vs. NCBI nr
Match: XP_038885926.1 (uncharacterized protein LOC120076234 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 148/169 (87.57%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MDNR-SSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEIS 60
           MDN  SSNKRLRVDS  SESDSPEVKRLR+DLLGLLDDADPDPT+QDLDS+IQSFADEIS
Sbjct: 1   MDNHSSSNKRLRVDSLDSESDSPEVKRLRDDLLGLLDDADPDPTVQDLDSIIQSFADEIS 60

Query: 61  PVSSATP------ADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSG 120
           PVSS  P       DSLPELGYLLLASDDELGLPPSDASTSHGGETEV EL RASSESSG
Sbjct: 61  PVSSPPPPPPPATGDSLPELGYLLLASDDELGLPPSDASTSHGGETEVVELARASSESSG 120

Query: 121 IGEIWGFEDAVPNYEAFELGEGERFYND-TEYVAFDGLFEHSDVYSVFS 162
           IGEIWGFED VP+YEAFELGEGERFYND TEYVAFDGLFEHSDVYSVFS
Sbjct: 121 IGEIWGFEDTVPSYEAFELGEGERFYNDTTEYVAFDGLFEHSDVYSVFS 169

[Close]

BLAST of Clc08G05070 vs. NCBI nr
Match: XP_022993320.1 (uncharacterized protein LOC111489362 [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 138/166 (83.13%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M++ SS KRLRVDS  SESDSPEVKRL++DLL LLDDADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MEDPSSTKRLRVDSADSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS-----ATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS     A P +SLPELGYLLLASDDELGLPPSDASTS GGE+EV ELTRASSESSG+G
Sbjct: 61  VSSPPPFPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P+YE+FELGEGERFY+D+EYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 166

[Close]

BLAST of Clc08G05070 vs. NCBI nr
Match: XP_023538923.1 (uncharacterized protein LOC111799678 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 8.8e-65
Identity = 136/166 (81.93%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M + SSNKRLR+DS  SESD+PEVKRL++DLLGLLDDADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSADSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS--ATPA---DSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS  + PA   +SLPELGYLL+ASDDELGLPPS+ASTSHGGE E  ELTRASSESSG+G
Sbjct: 61  VSSPPSLPAAIDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P+YE+FELGEG RFYNDTEYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Clc08G05070 vs. NCBI nr
Match: KAG6601790.1 (hypothetical protein SDJN03_07023, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032506.1 hypothetical protein SDJN02_06555, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 135/166 (81.33%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M + SSNKRLR+DS  SESD+PEVKRL++DLLGLLDDADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MADFSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS-----ATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS     A   +SLPELGYLL+ASDDELGLPPS+ASTSHGGE E  ELTRASSESSG+G
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P+YE+FELGEG RFYNDTEYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Clc08G05070 vs. NCBI nr
Match: XP_022938336.1 (uncharacterized protein LOC111444467 [Cucurbita moschata] >XP_022959152.1 uncharacterized protein LOC111460226 [Cucurbita moschata])

HSP 1 Score: 255.8 bits (652), Expect = 2.6e-64
Identity = 134/166 (80.72%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M + SSNKRLR+DS  SESD+PEVKRL++DLLGLL+DADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLEDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS-----ATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS     A   +SLPELGYLL+ASDDELGLPPS+ASTSHGGE E  ELTRASSESSG+G
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P+YE+FELGEG RFYNDTEYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Clc08G05070 vs. ExPASy TrEMBL
Match: A0A6J1JY78 (uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.9e-67
Identity = 138/166 (83.13%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M++ SS KRLRVDS  SESDSPEVKRL++DLL LLDDADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MEDPSSTKRLRVDSADSESDSPEVKRLKDDLLDLLDDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS-----ATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS     A P +SLPELGYLLLASDDELGLPPSDASTS GGE+EV ELTRASSESSG+G
Sbjct: 61  VSSPPPFPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P+YE+FELGEGERFY+D+EYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 166

[Close]

BLAST of Clc08G05070 vs. ExPASy TrEMBL
Match: A0A6J1H3R7 (uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC111460226 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 134/166 (80.72%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M + SSNKRLR+DS  SESD+PEVKRL++DLLGLL+DADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MADLSSNKRLRLDSVDSESDTPEVKRLKDDLLGLLEDADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS-----ATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS     A   +SLPELGYLL+ASDDELGLPPS+ASTSHGGE E  ELTRASSESSG+G
Sbjct: 61  VSSPPSLPAATDESLPELGYLLVASDDELGLPPSEASTSHGGEAEAAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P+YE+FELGEG RFYNDTEYVA DGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIPSYESFELGEGGRFYNDTEYVALDGLFEHSDVYSVFS 166

[Close]

BLAST of Clc08G05070 vs. ExPASy TrEMBL
Match: A0A1S3BDY1 (uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 137/163 (84.05%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           MDN S NKR RVDS  SESDSPEVKRLR+DLLGLLDD+DPDPT+QDLDSVIQSFADEISP
Sbjct: 1   MDNHSPNKRFRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSVIQSFADEISP 60

Query: 61  VSSATPADSLP-ELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIGEIWG 120
           VSS  P  + P ELGYLLLASDDELGLPPSDASTSHGGETEV E+ R SSESSGIGEIWG
Sbjct: 61  VSSPPPPPAAPSELGYLLLASDDELGLPPSDASTSHGGETEVVEVARGSSESSGIGEIWG 120

Query: 121 FEDAVPNYEAFEL-GEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           FEDAVP+YE  EL G GERFYN+ EYVAFDGLFEHSDVYSVFS
Sbjct: 121 FEDAVPSYETLELVGGGERFYNEMEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Clc08G05070 vs. ExPASy TrEMBL
Match: A0A0A0K873 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.9e-63
Identity = 133/163 (81.60%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           MD+ S NKRLRVDS  SESDSPEVKRLR+DLLGLLDD+DPDPT+QDLDS+IQSFADEISP
Sbjct: 1   MDHHSPNKRLRVDSLDSESDSPEVKRLRDDLLGLLDDSDPDPTVQDLDSLIQSFADEISP 60

Query: 61  VSSATPADSLP-ELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIGEIWG 120
           VSS  P  + P ELGYLLLASDDELGLPPS ASTSHGG+TEV EL R SS+SSGIG+IWG
Sbjct: 61  VSSPPPPPAAPSELGYLLLASDDELGLPPSHASTSHGGQTEVVELARESSDSSGIGQIWG 120

Query: 121 FEDAVPNYEAFEL-GEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           FEDAVP+YE  EL G+GERFYN+ EYVAFDGLFEHSDVYSVFS
Sbjct: 121 FEDAVPSYETLELVGDGERFYNEMEYVAFDGLFEHSDVYSVFS 163

[Close]

BLAST of Clc08G05070 vs. ExPASy TrEMBL
Match: A0A6J1FGC2 (uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC111445164 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.7e-62
Identity = 135/166 (81.33%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MDNRSSNKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISP 60
           M++ SSNKRLRVD   SESDSPEVKRL++DLL LLD ADPDP +QDLDSVIQSFADEISP
Sbjct: 1   MEDPSSNKRLRVD---SESDSPEVKRLKDDLLDLLDGADPDPVVQDLDSVIQSFADEISP 60

Query: 61  VSS-----ATPADSLPELGYLLLASDDELGLPPSDASTSHGGETEVGELTRASSESSGIG 120
           VSS     A P +SLPELGYLLLASDDELGLPPSDASTS GGE+EV ELTRASSESSG+G
Sbjct: 61  VSSPPPLPAAPGESLPELGYLLLASDDELGLPPSDASTSQGGESEVAELTRASSESSGMG 120

Query: 121 EIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYSVFS 162
           EIWGFEDA+P   +FELGEGERFY+D+EYVAFDGLFEHSDVYSVFS
Sbjct: 121 EIWGFEDAIP---SFELGEGERFYSDSEYVAFDGLFEHSDVYSVFS 160

[Close]

BLAST of Clc08G05070 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 0


Query: 5   SSNKRLRVDS-PHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISPVS- 64
           +  KR+R +S   +  DSPEVKRLR+DL  +LDD+DP+P  QDLDSV++SF DE+S V+ 
Sbjct: 14  AEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTT 73

Query: 65  -----SATPADSLPELGYLLLASDDELGLPPSDASTSHGGETE------VGELTRASSES 124
                S+T  ++ P+LGYLL ASDDELGLPP  + +      E      V +L RASS+S
Sbjct: 74  TTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSDS 133

Query: 125 SGIGEIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSD 156
           SGI EIWGFED V NY   + G G    +  +YVA +GLFE SD
Sbjct: 134 SGIDEIWGFEDHVSNYGGLDFGSG--VGDGGDYVAVEGLFEFSD 175

[Close]

BLAST of Clc08G05070 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 79/163 (48.47%), Postives = 105/163 (64.42%), Query Frame = 0


Query: 5   SSNKRLRVDS-PHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISPVS- 64
           +  KR+R +S   +  DSPEVKRLR+DL  +LDD+DP+P  QDLDSV++SF DE+S V+ 
Sbjct: 14  AEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTT 73

Query: 65  -----SATPADSLPELGYLLLASDDELGLPPSDASTSHGGETE------VGELTRASSES 124
                S+T  ++ P+LGYLL ASDDELGLPP  + +      E      V +L RASS+S
Sbjct: 74  TTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSDS 133

Query: 125 SGIGEIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGLFEHS 155
           SGI EIWGFED V NY   + G G    +  +YVA +G F ++
Sbjct: 134 SGIDEIWGFEDHVSNYGGLDFGSG--VGDGGDYVAVEGFFYYT 174

[Close]

BLAST of Clc08G05070 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 82/164 (50.00%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 5   SSNKRLRVDS-PHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISPVS- 64
           +  KR+R +S   +  DSPEVKRLR+DL  +LDD+DP+P  QDLDSV++SF DE+S V+ 
Sbjct: 14  AEKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTT 73

Query: 65  -----SATPADSLPELGYLLLASDDELGLPPSDASTSHGGETE------VGELTRASSES 124
                S+T  ++ P+LGYLL ASDDELGLPP  + +      E      V +L RASS+S
Sbjct: 74  TTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSDS 133

Query: 125 SGIGEIWGFEDAVPNYEAFELGEGERFYNDTEYVAFDGL-FEHS 155
           SGI EIWGFED V NY   + G G    +  +YVA +GL F HS
Sbjct: 134 SGIDEIWGFEDHVSNYGGLDFGSG--VGDGGDYVAVEGLSFFHS 175

[Close]

BLAST of Clc08G05070 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-21
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 0


Query: 7   NKRLRVDSPHSESDSPEVKRLREDLLGLLDDADPDPTLQDLDSVIQSFADEISPVSSA-T 66
           NKR+R      + DSP+VKRLR+D   L DD+  DP  QDLDSV++SF +E+S  ++A +
Sbjct: 17  NKRVR---DGLDLDSPDVKRLRDD---LFDDSGLDPVSQDLDSVMKSFENELSTTTAALS 76

Query: 67  PADSLPELGYLLLASDDELGLP----PSDASTSHGGETEVGELTRASSESSGIGEIWGFE 126
             ++ P+LGYL  ASDDELGLP    P         E  V EL RASS+SS +GE+ GFE
Sbjct: 77  SGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCEETVTELVRASSDSSEVGELCGFE 136

Query: 127 DAVPNYEAFELGEGERFYNDTEYVAFDGLFEHSDVYS 159
           D V  +   +LG+   F    EY  FDG  +  D++S
Sbjct: 137 DHVTEFGPCDLGDDGLF----EY--FDGCLDSGDLFS 161

The following BLAST results are available for this feature:

BLAST of Clc08G05070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885926.1	1.0e-68	87.57	uncharacterized protein LOC120076234 [Benincasa hispida]	[more]
XP_022993320.1	1.2e-66	83.13	uncharacterized protein LOC111489362 [Cucurbita maxima]	[more]
XP_023538923.1	8.8e-65	81.93	uncharacterized protein LOC111799678 [Cucurbita pepo subsp. pepo]	[more]
KAG6601790.1	1.1e-64	81.33	hypothetical protein SDJN03_07023, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022938336.1	2.6e-64	80.72	uncharacterized protein LOC111444467 [Cucurbita moschata] >XP_022959152.1 unchar...	[more]

BLAST of Clc08G05070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc08G05070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JY78	5.9e-67	83.13	uncharacterized protein LOC111489362 OS=Cucurbita maxima OX=3661 GN=LOC111489362...	[more]
A0A6J1H3R7	1.2e-64	80.72	uncharacterized protein LOC111444467 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A1S3BDY1	2.1e-64	84.05	uncharacterized protein LOC103488614 OS=Cucumis melo OX=3656 GN=LOC103488614 PE=...	[more]
A0A0A0K873	8.9e-63	81.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G038510 PE=4 SV=1	[more]
A0A6J1FGC2	5.7e-62	81.33	uncharacterized protein LOC111445164 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]

BLAST of Clc08G05070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.2e-30	50.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	1.1e-28	48.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	1.1e-28	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	4.9e-21	45.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..112
None	No IPR available	PANTHER	PTHR34539:SF19	T6J4.11 PROTEIN	coord: 3..157
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 3..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G05070.1	Clc08G05070.1	mRNA