
Clc08G04357 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAATGAGTTAGATGTAGAAGTTAGTTTTTCTTAAGCAATATTAAGTATATTACATCTTGATTAATGCATATCATTAGCTTGCATAACTTTGCCTGACAAACAAAAGTAGTAAGCATGACTGTCTAGCTTGAGAGAGTGGATGGTTAATCTTTAGCATTTATCGAGACTAGATGAGGTGCAGAGATGTAGTTCATCTTTTGCCAACGCAAACTTACCATGCGTCTTAGAGATAAGATTAATGTGGCGTCGAAACATCGAGAGATGGATTCACAAATTAAGTTTGTAGGTATGTAATTATACTTGGATATGCTTAAGTAATCAATTAGCTTCTGCATTAACTCTACTTTTATCGCATGGTTCCATTCATTCTTGACGCATGCTATCTGACACTAAATGACATTTGACTAACCATCGCCGCGTCCACCTCATTGTTAGTTGTAGGAAATTTTATTCATTCTTTATGTATAGTTTTAGACACACAACCAATACATGCACATACTACATGTACAGTTCCCCGCATAGTCAATCATCTAATCTCAATGCCTAGTTATTACAAATCCCTGCGTTCGACCCTAGACTCACCAAGAAACCTATAAATGCTTATACTTGGGCTCTTTATAGGAAAACTTGCTTAATCATGATTACACTTGAGTAATTCTCGACGCATCCTTGTACGGAAATGATAAATCTATTTTTGTGCAACAAGCTAAGAAACTCAATTTAATTCAAATAGAACTTTAACAAACAGTTAGGATAAATTTTCTGCTATTGGCGAGCCTCTTTCTTACCGTGATCACTTGGTATACATCCTTGAAGGGTTGGGTAATGAATATAATTCATTTGTCACCTCTATTCAAAATCGCACTGATAGACCCTCCATTGCAGATGTTTGTAGTCTCGTGTTGGCTTATGAAGCTCGATTGGAAAAACAAACTTCAGTTGATCAGCTCAGTTTAATTCAAGCTAATGTTGCAAGCATGTCTGTCTCAAATAATTCTCGTTGCCCAAAATGGTCTCCATCAGGTAAGTCTTCTTCCTTTTCTCCTATGCAAGTACCTGGAACTATGCCATTTAATAGTGCCACTCTTACTGGTCTTGGTGTTCTTAGGTCCCCTCGTCCTTTTTTATCCTCCTATAAATTGTTCACCATGGCCTTCTCAAAATCGCCCTCCTAATCCTCAATGCCATATATGCTCCAAGTTTGGTCACACAACCTTGTCCTACTATAGCCTTCACAATCTATCCTTCTATACTTTTCTTCAAGCTCGCACTCCAACACATCATGCTGACTTTACTCAAATCGCTTCCCATGTTCCTTCATTTGCTCAACCTTTTGATATGTCTTACTCCAGTCCTTGA ATGCTAAATGAGTTAGATGTAGAAGATAAATTTTCTGCTATTGGCGAGCCTCTTTCTTACCGTGATCACTTGGTATACATCCTTGAAGGGTTGGGTAATGAATATAATTCATTTGTCACCTCTATTCAAAATCGCACTGATAGACCCTCCATTGCAGATGTTTGTAGTCTCGTGTTGGCTTATGAAGCTCGATTGGAAAAACAAACTTCAGTTGATCAGCTCAGTTTAATTCAAGCTAATGTTGCAAGCATGTCTGTCTCAAATAATTCTCGTTGCCCAAAATGGTCTCCATCAGGTCCCCTCGTCCTTTTTTATCCTCCTATAAATTGTTCACCATGGCCTTCTCAAAATCGCCCTCCTAATCCTCAATGCCATATATGCTCCAAGTTTGGTCACACAACCTTGTCCTACTATAGCCTTCACAATCTATCCTTCTATACTTTTCTTCAAGCTCGCACTCCAACACATCATGCTGACTTTACTCAAATCGCTTCCCATGTTCCTTCATTTGCTCAACCTTTTGATATGTCTTACTCCAGTCCTTGA ATGCTAAATGAGTTAGATGTAGAAGATAAATTTTCTGCTATTGGCGAGCCTCTTTCTTACCGTGATCACTTGGTATACATCCTTGAAGGGTTGGGTAATGAATATAATTCATTTGTCACCTCTATTCAAAATCGCACTGATAGACCCTCCATTGCAGATGTTTGTAGTCTCGTGTTGGCTTATGAAGCTCGATTGGAAAAACAAACTTCAGTTGATCAGCTCAGTTTAATTCAAGCTAATGTTGCAAGCATGTCTGTCTCAAATAATTCTCGTTGCCCAAAATGGTCTCCATCAGGTCCCCTCGTCCTTTTTTATCCTCCTATAAATTGTTCACCATGGCCTTCTCAAAATCGCCCTCCTAATCCTCAATGCCATATATGCTCCAAGTTTGGTCACACAACCTTGTCCTACTATAGCCTTCACAATCTATCCTTCTATACTTTTCTTCAAGCTCGCACTCCAACACATCATGCTGACTTTACTCAAATCGCTTCCCATGTTCCTTCATTTGCTCAACCTTTTGATATGTCTTACTCCAGTCCTTGA MLNELDVEDKFSAIGEPLSYRDHLVYILEGLGNEYNSFVTSIQNRTDRPSIADVCSLVLAYEARLEKQTSVDQLSLIQANVASMSVSNNSRCPKWSPSGPLVLFYPPINCSPWPSQNRPPNPQCHICSKFGHTTLSYYSLHNLSFYTFLQARTPTHHADFTQIASHVPSFAQPFDMSYSSP Homology
BLAST of Clc08G04357 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28 Identity = 71/158 (44.94%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of Clc08G04357 vs. NCBI nr
Match: XP_022148871.1 (uncharacterized protein LOC111017438 [Momordica charantia]) HSP 1 Score: 134.8 bits (338), Expect = 7.4e-28 Identity = 85/185 (45.95%), Postives = 111/185 (60.00%), Query Frame = 0
BLAST of Clc08G04357 vs. NCBI nr
Match: XP_038887133.1 (uncharacterized protein LOC120077323 [Benincasa hispida]) HSP 1 Score: 129.4 bits (324), Expect = 3.1e-26 Identity = 61/90 (67.78%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Clc08G04357 vs. NCBI nr
Match: XP_038891713.1 (uncharacterized protein LOC120081111 [Benincasa hispida]) HSP 1 Score: 120.2 bits (300), Expect = 1.9e-23 Identity = 75/187 (40.11%), Postives = 103/187 (55.08%), Query Frame = 0
BLAST of Clc08G04357 vs. NCBI nr
Match: GFS33695.1 (hypothetical protein Acr_00g0030110 [Actinidia rufa]) HSP 1 Score: 107.8 bits (268), Expect = 9.7e-20 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 0
BLAST of Clc08G04357 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 7.2e-29 Identity = 71/158 (44.94%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of Clc08G04357 vs. ExPASy TrEMBL
Match: A0A6J1D6N7 (uncharacterized protein LOC111017438 OS=Momordica charantia OX=3673 GN=LOC111017438 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 3.6e-28 Identity = 85/185 (45.95%), Postives = 111/185 (60.00%), Query Frame = 0
BLAST of Clc08G04357 vs. ExPASy TrEMBL
Match: A0A7J0E8R3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_02g0010880 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 4.7e-20 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 0
BLAST of Clc08G04357 vs. ExPASy TrEMBL
Match: A0A7J0DER3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_00g0030110 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 4.7e-20 Identity = 63/149 (42.28%), Postives = 89/149 (59.73%), Query Frame = 0
BLAST of Clc08G04357 vs. ExPASy TrEMBL
Match: A5BPS3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013628 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17 Identity = 64/173 (36.99%), Postives = 88/173 (50.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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