Clc08G03940 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G03940
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr08: 11677431 .. 11677780 (-)
RNA-Seq ExpressionClc08G03940
SyntenyClc08G03940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATCTCAATTAAAAAATTTAATACAAAGACTGAAATAGATTGTTTCTCTCACGACGAAAACAGAAATATTTGTAGTTATACCCAGACTTGAGTCAGTCTTCTTCTCTCTCTTTCGATTCCTTCGATTTGGTGGGTCTTCCTCCTCAGACAAGAATTGATCCACAACGAACAAAGGCTGCCTTTGTGTTCTTTGATTCATTCGAAACAGCTCAAAGAGGAGGCCGATTCAAATCAACAAAATCTGAGCTGCTGAGGTTAATTTCGCTTCTAAACCCAAAATCTGATTCTAATTTCCCCTCGTCCTCTCGCCTTCTCCCTCCCTCCCCAATGCGATATGAATTTTGA

mRNA sequence

ATGAAAATCTCAATTAAAAAATTTAATACAAAGACTGAAATAGATTGTTTCTCTCACGACGAAAACAGAAATATTTGTAACTTGAGTCAGTCTTCTTCTCTCTCTTTCGATTCCTTCGATTTGGTGGGTCTTCCTCCTCAGACAAGAATTGATCCACAACGAACAAAGGCTGCCTTTGTGTTCTTTGATTCATTCGAAACAGCTCAAAGAGGAGGCCGATTCAAATCAACAAAATCTGAGCTGCTGAGGTTAATTTCGCTTCTAAACCCAAAATCTGATTCTAATTTCCCCTCGTCCTCTCGCCTTCTCCCTCCCTCCCCAATGCGATATGAATTTTGA

Coding sequence (CDS)

ATGAAAATCTCAATTAAAAAATTTAATACAAAGACTGAAATAGATTGTTTCTCTCACGACGAAAACAGAAATATTTGTAACTTGAGTCAGTCTTCTTCTCTCTCTTTCGATTCCTTCGATTTGGTGGGTCTTCCTCCTCAGACAAGAATTGATCCACAACGAACAAAGGCTGCCTTTGTGTTCTTTGATTCATTCGAAACAGCTCAAAGAGGAGGCCGATTCAAATCAACAAAATCTGAGCTGCTGAGGTTAATTTCGCTTCTAAACCCAAAATCTGATTCTAATTTCCCCTCGTCCTCTCGCCTTCTCCCTCCCTCCCCAATGCGATATGAATTTTGA

Protein sequence

MKISIKKFNTKTEIDCFSHDENRNICNLSQSSSLSFDSFDLVGLPPQTRIDPQRTKAAFVFFDSFETAQRGGRFKSTKSELLRLISLLNPKSDSNFPSSSRLLPPSPMRYEF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G03940.2Clc08G03940.2mRNA