Clc08G03090 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G03090
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionLow affinity potassium transport system protein kup isoform 1
LocationClcChr08: 6984656 .. 6996177 (+)
RNA-Seq ExpressionClc08G03090
SyntenyClc08G03090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTTCAGCCATGGCGCCGTCGATTTAAACTCCGGTGATCTCTCTCGTTTTCCGTCTCTGCCGGGTTCTGTACGTTCTATTCTCCCTTATATTGATCTGATTTTGCTGTTCTTTTTGGATAATTTGCTGAGGTGGAATTCGAATGTTTGAATTTGTTGCTTTTCTTTTCTTTTTGAAGTATAAGAAAGTCAATATGTTAGTTGATTCGAGCTTGCTGTGACTGGTATGCTTGTTTCCAGTTTGGCAATGGAGATAAAGCATATTTAAGATTTCAAATTTCGATTTTAGTTAATTTTGTTCTCTCTATTTGCTTTGCGAACTAAAGGAGCATTTCAGGAAGTGGGATTGGGAGTTTCCGGTTTGATCGTGTTTTTTTTCTCCCTATTTTCTTTGCGAACTAAAGGACCACTTTCGGTTATGTTCGATCTTCCATTAGTTCTTTGAAGTTCGAAGCTCTTTGGAATTTTGAATTGCTTACTTCTTAGATGGTTCTGTCACGTCTATAGGTGGTATGATTATGCTGGTTTTGATTTTAGTGGCGTTTATGATATTTATTGTTTGACTTTAGTTAATATTTAATGAGTTATGAGTGGTATTACTTCGATGATGCCGATTGAGGAATCCTTATGGCGTACACGGGCGGGTTACTGAATAGTAATGTAAAGACTAAAATTTTAGTTGCATCAGTGATTCAATTTTATGAGATTCGTGCTAGCCTTTCAATTTCATCTGGTGGACTTAACCATATGCGTCTAATTGTCACAGTTTTTGGCTTCCTAACTCCTGTTCGTTACCATTGAATCTATGCATTCCAAATTCGTGGGGTCTATTCTCAGCTCTGTGGATTCTTATTTAAGCTTTAAATTTTAACTCTCTACAATTTATTCCATTCTAGTTTACATTGCTAATTAAAATCTTAGAAATAGTTGCAATTAAGTGAACGTTTGCTTGGTGTTATACCCCCCTTTGTTTTCCTTAATTTTACCATTGCTTTATGTATGGTCACTTTGACACTCTCTCTCTGATGTTTTGCTTCACTGATATGTTTTATAATTTACACTGTCGTCAGTAAAGGAATACATCATACATTTGTGAGAAATATTGCTTACTCGATCTTTTTTTTCTGATAATATTATGTGGACTGTTCGGATTATCAATCAATGGTGACAGACAGGTGCCTTTGGTTGCTTGAGGGGTGGAAGCCTTCCAAGAAGTAAATTTTGAGCACCCCAGATGAGGTATAACTAATGTTATTGGCAGTAGAAGGAGGAGGGTTCTTTTCTTCTTCAGCATCTGGGTATAGCAAGGGTTTGACCCTTCTCCTTTTGGGTCAAAAGGACGAAGATAAACCCATGAGAGTTTCTCCGTGGAATCATTACCAGTTGGTGGACCACGAATCAGAATCTGACCTCCAGCTGGCTTCCACAAAGAACCGCATTTCCCGCGGCTGTGCCTCCTTTGTTTGCTTTGGTCGCACTTCCGCAGGGCTCGACAGTTCCCCTTCTCCTCTTAAAGTTGGCCCAACCTTACCACATGATTCTTTGCCTGGGTCTATAAGTACCGATGAGGGGAAAGATGAAATTCCTGTGGAAGATGGTAATACTTTCAGAAATATAGCCCTTAAAAGTAGCTTGAAAAGGCCAAGTAATGGTATTTCAATTTCTCATCAGAATTCTCATGAAAGTGAAACAATGAGTAAAAAGGATGGTGATATACGTTGTCTTACTAATAGAAGGAAAGTTCAGTGGACTGATGCTTGTGGGAGTGAACTTGTAGAGATCAGGGAATTTGAGCCCAGGTATTAAATGTTTCTTGTACATTTCTTTTTTGCACAAAAGTTATTCATGTCTGTTGATTTCCTTTATCATGTTCTTTCACTGCTTATGAATATTGCTAGCAGGATCCTATTTAGAGCCTAAGCCCACAAAAGGGAACCCCACTAAAGAAAAGGGCTCTAATCAAGTATAAAAAGATCTACAGGTCCTACTCTTTCTCTCACTACACAAGTCCCACAACACAACACGGATGTTTGCACATCACAAAAACTTCCCCTTCTCCTGAAACGATCGATGGTGACTCTTCAATCATCACCTTTCTAAGAGTTCTGTTTGTAGCAAACTGAAAGTCAAACAGCTCGAAAAAAGATATTCCAAACAATTCTATCAAAATTGCAACTTCAAAGAATATGATCAAGGTTTTCCTCCATCGTCCAACAAAGAATGTAACAAAACGATCCAAGCAAAGTAGAAATCTTCCTCAAAAGCTAATCTAAAGTGTTAAATCTTCCGCGGATTACCTGCCAAACAAAGAATTGAACCTTCTCTGGAACTTTTTCCATCCATAGAGAAGATAAAATAGACTTGCTGATCAGGAGAAATTCAATAGGCACTCAAAGAACAAGAATGGACTACAAGAAAAATCCTCATTGGGGTTGGACACCAAAAACGAATATCTCTTCTCCTTAGTCTAAGAACAAACTCCTCGACCAGATAAGAGAGCCAAGATGTCTGGTCTTTCCCTATCAACATCTGCTATTATATTCCATTACCTTGTTCACTTTGAGCTGATTTTTGTTGTTCTTATGTTGACGTATCTATATATCTTCTTCCACATTTCTTTATTTAAGCTTAGCTGATTAGCTTGCTAGTGATGATATGTTATCGTACTTGTAGATACCTTTTACCACTTCAGATGTTATTTTTGTTGTCTTCTTAATAAGAAAGCACATGCAAAATATAACGGAGGAGCATTTGAAAAGAATAATAATGAAAGAATGTTCTCCTATGTTTGTGATTAAAATAAAGGAACGTCTCATAAAAGCTTTGACTCACTCATAATCCAGAGGAGGCATTGAGGCCAGTTATGAATTATGTGACGAATTGAAATTATTTAAAGTTTCCTTGTCTTGGAGTGAACAATGAGTCATGTGATCATGCTCCAGCTCCATGTAGGGACTAGGGTGACTTTGAGAAATCTTCTCACTTCGAACTTCTTTAATACATTGATCTTTTACTGAAATATTTGGAAGTCCTTGATTTATGTATTTTCTAAATGTAATTACAGCTGGACAGTGAAGGGCAGTCAATCACTATAATGCACGGACCTGATAATTACAATTAGAAACTTTCCATGGTCCTGGAAAAAATAAGGCCCTAGCTTGTACAACTCAACTATTTTTAAAGTTATTTGAAAAGGGATGAAACACTTTTGACTTCTAGAGATGATCAACGACTTGTCTCTAACAGAAATCATTGTTCCAGTGAACAATCCTAATTGTTTAAGTACACTTGCCCAAGTAAAGTGATGTACTGAATCTTGTCAAATCTAGAGGCAGACTCAAGGTATTAGGTGGTAGGTGCTTGATATTGTTTGTACTCGCCAGTTTGCCTTTGTCGTTGGAAGATGGCTTTGATATCTCTTCCTTATTGCCAAACTAGGTGGCCGATTATTTAAGATGTTGGAAGAGAAGAATAGTTATCTCTAAGCTAACGTTAATTCATCGGGACTTTCTTGACAATATTCTTGCCTGAAAGGCATTGGGTCCAAATAGTTCTAAATCATACTAGTATTCTGGAATTAGTTTTGGCTGATGTCTTTTTGGAGGCTTTATATTATTCTGTTTCAAGGGTGTCAATTTTCTGGTTTTCTGGTTTGGTCGGGGAGTTTTGTGTCTTTCTCCGTTTTCGTCGTCCATTGTCCAGTAGAGAAATGGCAGAGAGCTCTTTTCTTACATTGGTTGAGGGTTTCATCTTTATGCACTGGAGACAGGATATACGTGTTTGGAGTCCTAATCCGTTAGAAGGTTTTTCTTGCAAGTCTTTCTTTAGTTTTATTGGACCCCGCTCTTGCTTATGAATTGGTATTTAAAGTTTTTTGGAGGCATAAAATTTCAAAGAAAATTAAGTTCTTTTCTTGGAAAGTGTTGCTTGGCCGTGTGAACATATTGGATAGGTTGGTGGGAAAGATGCCTTCGTTAATGGGTCTTTTTTGTTGTATCCTTTGTCATAAGGCGGAGAAAACCTAGATCACCTTCTTTGGGTTGTTGATTCATGAGATCTATGTGGAATTATTTTCTTTAAAGGTTTGATGTTGTGCTGGCTCGCCAGAGGGATGCTTGTCCAATAATCAAGGAGTTCCTCCTCCATTTGCCTTTCAAAGAGAAATGATGTCTTTTATGGTTTCTGGGATATGTGCTTTGTTGTAGGGTCGTTTTTTTGTTGGGGGGCGGGGATAGTGTTTAGAGGTGTGGATAGGGACTCTAGTGGGGAGGTTCCATGTTTCCCCTTGGGCTTTGTTTCGCGACTTTTTATAATTATTACCTAGGTAATATCATACTTAGTTGGGAATCCTTTCTCTAAGGAGTTTTTGTGGGTTTGTTTTTTTGTATGCACTTGTATTCTTTATTTTTTTTTGTCAACGAAAGCACTTGATTATTCTAAAAAATAAAAAATAGGGTAGCTAGTGGCAGAAGGAATAAGAACAGTATTGTATTTTTGTCTAGTGGGGTTCGTTCTCAAGGGGTTGAGGAGGAGGTTCATCAAAATAATAAGGAAGTTGAGAAATCACTTCAACCTCATCAAAGTCTTAAATCTGTCTCAGGCTTCAAAATGCATATATTTAAGTAACATATATTTAAATCTATTACTGCTGGTGGTATAAGCACAAGCTTACTTAAATATGGGCCTTATAGAAGAAATGGAGAATTGTAGCGTTGGTAACCTCCCTATGCTTTACCTTGGAATGCCATCTTGGAGATAACTTAGAGGCCACTTCTGGCTGGAATCCTGTTGGGAAAAATTTAGATGATGAACAGACGAAATTACGACATTTCAAGAGGCAATGAGTTAACTCTATCATTTGATAGGCTAACAAGCATCTATACGGATATGAGGCATGAATATGTTACAAAACGGTCACGCAAACATGTCATTTTTTAATTTAATTTACAACACAAACATGGCAAGGGCATCTTTTGTACATTTAATATATACATATATATTAATTTAAGGTCAATTAATTTAAAATTTATATATTTAAAAATTTAGTTTGTTGTATTTTGCTCTAGAAAATTATTATTTTTTGTCATATATGTGTCTATTTAGTATACTATACTTAACAAGTGTTTGATAGATGTCTAATGAATGCTTTGATCTACTTTGACTTTGTATAACTATGGTGCTAACAAGTGTCTGATACGCGCCCAACAAGTGTTGGTGTATTCAAGTGTTGGACACAGACATGCTAGCCAAACTAAAGTATCCGTGCTTCTTAGTTGATAGGTATCAGATTCACTAAAAATGAGTAAGAAAAAGCATAGCGAGCTACAAAATGGTATATAGGGAACCTAACATATTCCAATCTATTTTCTCTTGGTATTCACCCCAAAGTCCACTTGCAAAATGGTGGATAAAATCTCTGGGAACAGATGGAAGCTGCCATCCAAGTAACAGGCAACCTATTCACTCTTTCAAGAGATCTTGGAGGCTTTGGTGTTTCACTAATTAGAGGAAAAAAATGAGGCTCTTCTTATGGGACACTTTGGTTTCAATCCTATTTTGGTTCTTAAAACTTTTATGCTTATTCCATTTTAACCTGTAAACTTCCTAACATTTTGTTTTAGGTTCTGAACTTAGACAAAAAGCCACTCAATCCTTCTTAATTGTTTTTTATACATTATTTAACCTATGTTAGACATAAGCATGAATGAGTGTTAGAAACCACATGTAGGTCAAGTGTTGAGTTTCAAGATTCAAATTTTTGTTAAATGATAAACAAAAGAATTAATTACTACTGAGATAGTTTTTTATGCCTACATTAGGAACTAAAAAGCAGACCTTGGAGTTGAGGGATCAAAATAGAACCTCCAACAGTATAAAAAGACTAAAATGTTGAGACCTGTTGCTTCTTCAAAGATAACTGTTTTTTTATTTTTTATTTTTTATTTTATTTATTTATTTATTTATTTTTAAATTCTCCAAAGATGACTGTTAAAAAAGATTTTTTATGCTTCTATAATCTTTGTTAGATGACAAGCAAGTGTCGGTGGTATTGGAAAAAAGGTGACTAATTCAAATGAAGTCATTCTTGGAAGTAGACTGAAACTCTGAAATAAGAAAATTTGGCCTTAACAATTAAATGGAAAAGGTTCCAAATAAAGCTGATTTCTTTCTTGGGACTTTGTGTCCCGGTGGCTGAAACATGACCAAAAGTATTCAAAACAAATTTCTGTTAGAGAAAAATCCAACAAGTTCTAGAAAATATGGGAATAGCAACCTCCCTGTGATAATCCTATTCCAAACTGAAAAACAGAGAGTTCCACTACAATGACAAAAGTTCCAAAAAAAAACAAAGAACAGTAACCAATAGAAATAAGAAAACAATGAACAACTCAGCACATTCGAGAGAGCCAGAAATTCCCTCCTAGGCCTCAAATTTCTCTAAAACTTCCACATCTTATTCTCTTCCAAAAACCCATACGTAAACCCCATGACTGGTCCCTGCACTACATAATAGGATAGTCGTCCCTTTCCCATCTATCCTTGTGCATTCCCCGATTTTCCTCTTCTTCCATAAGTATGGATAATTGGGGGTCTCAAAATTTCTTAGTATATTCGAGTTGGCTAAATCCTTGCCCTTCTTGGGCTTTCCTTTCTTATTCTTTTTTTTTTTCTTTTTTCTTTTTGTGTGTGTGTGTGTGTCACAGAGGCAAAAGCGTGGTGTGAAATTTTTTGCAATTTCGCTATGTAGTGCCAAGGTGGTTTCCTTGACTAGCCTGAAGCTGGATCCAATTTTTACCAAATGTTGCTCGAAAGCACCCCACAAATTCCCTCTTTGGCCGTGGCCTTTAATCACACTCTAGAAAGGGTAAGTAGAAGGACATTTGAAGTTGTGGAAATATAACTTTACTTATCAAAACCACACTTACAAGACTTGGAACAAAGCTCAATTACAAGACAAAGGTCTCTTAGAGAGAACAAGATGCAAAGGAGAGATGCAAAGGAAAGGAATTATCACACAAAGTGAGGTATGTTCTTGGACATCCCCCAAGCTTCACCATTTTATATGTGTGGGAGGAGATTCTTTAGGAGAGGGAAGCGGGGGAGTGGCCTTAGTGGGAGTAAAGCTTGGCCACTGCCCTATTATTCAGGGACACTCACATGTCCCATGATCTCCTACCTTTTGGGGAGGGGACATGCCCACTTTCCCCTAAAGAATAGTCTCCAGTTCCCAGTAAGCCTATTTTTAGAACCCATTATCCTATTTTGTAGGAGCCACTCTCCTTGGCCCCAAAATAGTAGGATCCACTTCTTTTGGAACTCCTAATTTCATGTGTCTACTCCCCACTTAGAGTAAGTCGGCTTGCATGGTTAATGAACCATCTCAAAGGTCTTCCAAGTGTCTCGGGTCCTTTGGAGTGCACTCGTGCCCGAGCTGCTAGGTGGGCGTCTTCGCCGGTACCTCCCCTGCACACTTATCTTGTGCGTGTGTGCCTGTCGCCCCGCTGGCTGGGGCACGCCTGGGATGTCCATGGGTCTAGTTGTGTGTGCGCCCAACGCTTTTCTGTGTGCACTGTTGCTCCCATTGAGGCTATGCGCGTGCATGCACCCATGCCATGGGCCCTGCGTGCGTTATTGTGCGCGCCTAATCTTGAAGCACGGGGTGTGGACCACTTGCCCATGTTGTGCTGATCTGTGCGCGCACGCTTGATGCCGCGTGCGTCCATGCTAACCTCAAACTCCTAAAGATCGAAGCACTTGACATGGCAGGAGGGCCATGTCCAATGAGCAAGACACATGCCCAAGGCTAACTGGAGGTTAGACAAGACAGACACCCAAGAGGTGGTGGACATGCGAGCTAGCGCATCACGACATAGGACGCGGTGTGGGCAAGTGGCCCAAGCCTCGTGCTTTAAGGTTAGCATGAACACATGCAGCATTAGGCGTGCATGCGCAAATCGGCATGTCGTGGGCAGGTGGCCCATGCCTCGTGCTTTGAGGTTAGCACGAAACGGGTGTGCTCAGATAACAATGCACGCAAGGCCCATGGCATGGGCGCGGGCACGACCGTGCCTTGATGAGAGCAGCAGCACACACGGACAAGCGTTGGGCATCCCAGGCGCACGCCAAGTAGTCGGGCGACAAACATGCACACACAAGGTAGTGCGCGGGCCAAGATGCCTACTTGGCAACTCAGGCACGCATGCACTTGGGTGCACTCCAAAAGACTCGAGACACTTGGAAGACCTTTGAGATGGTTTATTGACCACACAAGTTGACATACTCTAAGTGGGAAGTGGACATATGAAACTACGAGTTCCAAGAGAAGTGAATGCTACTATTTTGGGGGCAAGGGGTGTGACTCGTACAAAATAGGATAATGAGTCCTAAAAATAGACTTACTGAGAAGTGGAGGCTATTTTTTAGGGAAAAGTGGACATGTCTCCTCCAAAAAGGTAGGAGATCATGGGACATGTGAGTGGCCCTAAATAATAAGGAAGTGGGCGATTTTTAATTTTAATCCCACTGGGGCCATTCCCCCACTTTCCTCTCCTAAAGAATCTTCTCCCACGCCTATAAAATGGTGAAGCTTGGGGGATATCGAAGACCATACCTCACTTTGTGTGATAAATTCTCTCCTTTGCATCTTGTTCTCTTTAAGAGACCTTTGTCTTGTAATTGAGCTTTGTTCCAAGTCTTGTAAGTGGTTTTGATAAATAAAGTTATATTTCCACAACCTCAAGTGTTCTTCTGCTTACACTTTCTAGAGTGTGATTAAAGGCCACGGCCAAAGAGGGAATTTGTGGGGTGCTTTCGAGCAACATTTGGTAAAAATTGGATCCAGCTTCAGGCTAGTCAAGGAAACTTCCTTGGCGTTGTGCACGGGGAAACCGCAAAAAATTCCGCACCACACTTCCGCTCCCATCACAAGTCTGTGTGAGAGAGAGAAGAAAGGAAACAAATACTTTTCATTGATATAATGAAATGAAACTAATTCTCAAAAGTACAACAAAACCCTATAATGGGGAGGCAAGCATAAGAACATGATAAATCATAAAACATTGTATGAATAATAAAACACAAAACTGTGATCCAAAACAAAATTCCTTTCTGATTGTACTCATGTTAATAATTCCAATGGGATGGCATTTTTACGAGTTTGTATTGGTCTAGAATTTTTTTTATTTATAATGTGTGTTAGTACTATCGAAAGTGTAGTCTTGTTTGTAACTTTACCTTCAGAATCTTTCTTTCTTTGATATTACTCTATTATAAAGTTTACTATATTAATGAAAATATTATATACACGCACGGGTGTGCACACATCAGTTTTGAAGTTATATAAAACCATATTGTTGGACACCAATTAACCAAATAGATCAACTTGACATAGTTCTATTGGTTTCCTTGATTTTCTTCATATGGCTTGCATTTAAGGTCATGGAAATGTCCAATTGGTGGGTTGTATTAGCATACTCGGCAATTAGGAGTAAATCTTTGTAAATATTTCTAGTCTTTGCATTTAGCTCTTAACAATGTTCTGGAACCTATACAGTACTTGTTTTGCGAATGATTTAATGTAAAGCATGTTTGAGAATGCGTATGATTAAAAGTATGATGTTCTATCTCTTACACCCCCTATTTTCCTTCACTACAAACACTCATTCCCATTAAAATCCATCTGCTTAACTTTTCTCCGTCCATATTTCCCTTACTAATCTCTTTGCAGACACTCGTCTTCCTTTTACATCCATCTTTTACCAATCTCTCTCTATAAACTCCTCACTATCTAGTCTCTGCATAGTGCATGCACACTTCCTCTCAAATCGCATCTATCTCTCTTCATGTCCCCTCTCTTAGTAATTTCTCTTTATGTATATCTTTCTCTCACTAGTTTCTCCCCTACAAACTCACCTTTTTTCTCAAATTTAATTGTTTTTATTTAAGTTATTTGCTATTTCTTGAACTATTTGTTTTCATGAATCATTCATATTTGTTAAATATAAATGATTTATGAATTCCTATAATGTTTTTTTTCCTTTTTGGTAAGAAACAATTTCATCGATGTATTTTTTTATTTTTATTTTTATTTTTTTGGGAAAACAATGTTATTGAGGTGTGAAATTACAAAGAGGAGTGAAAGAAGCTGCAATCCAAAGGACTTCTCCTATAGACAAAAGTGAAATAAAATTATATGGATGAATAAGGAGAGAATTTGCAACAAAAGATAGCTAAATAAGTAGTTAAATAGTCTATCTTAAGCTTGCTCCCTTCTCTTCTATAGCCTTCAGTGTTCCTATTTTGTTAAAGAAAAGAAAGAAACATTTTTGAAATATTTGAATGATTTATTAGTAAATACATTTTTTGGTCTAAGAATATATATATTTTTACTAAAGTTAGAAGATTTCTTTATAAAAACTAATGCTTGTTTCGTGGTACTGAACTGAAGTCATCTGGACAACGTATCATTGCATTGCTTCTCACTCTTAATTTCATTTATTAAAACTTTTGAAATTAATCATTCCAATACTCAAAGTAAAAAAAAAAAAAAAAAAAGACTTGAAACATATTTTAACTTTGAAGTGATTGTGCTCATTCACATTTACATTTACATAATACATATGTTCATGAAGAACACATGTGATGAATTCTCTCAGCAGTACTAAGATATTCCTCTTTTGATTGTCATTAACTGGAGAATTGTTGCAAATGACCAGCCCTTCAAAAGTTATTGCTGCTCAATAATTCATCTCATGTCTTTAGAAGTAGAATGTAGTTCTCATTCTTGAATCAGTTGCGTCTGTTCGAAGTAAATTTCCTCAAGAGTAGAAGATTTATTTGCACATTGAATATATGTTTATCGTTTCTTATTTGTCCTGTTTTTATTTCCTCTCTTCCCTGGAATATTTTCGTATGATTCAGCCTTTCTCTCTCATTCTCTTCTCTCTCTCTAATTGTTATCTGGTTCCATTGCCAGTGAAGCAGATCTTTCCGATGACGAGTTCGAAAATGGAAACAAGAGAAGTTGTTCTTGTGCAATTATGTAGCTTGGTTCATGTCCAAAATTCTTTAGGATGCTTCAAGAAATAGAGTAAATCTCCGAAAGAGAACAAAAAAGAAAAGGAAAATGCTTGTCTGTCTCCCTTGGTCAATATTCTTTGTGGATATTCGCATTCCAGATAAGTCGTGACCATGGTCCCGACTTTATTCAATGGCCACATTTCCCACTCGATCTTTGCTGTTCATAGTCAATCGTTTCAGTTTTCAGTTTTGTTCCTATGTGTGCTCTTTTTATTATTATTATTGTCATTTGTAAGACTTCTTCCATTGTACACTATCTTCAGTATATTCTTAATTGCTTTTTTTGGTCATTTGCTATATGATGAATATTCATTTGTTTTCCCAAATTCCCAAATGATCCATCCTGATGGAATTATAGTACTTTTGTGTTCTCTTCAAGATCAAATGTTTTCTAGCTACTTGATATTTCAGGTAGGATGCTGCAGTTTTGCCAGACATAA

mRNA sequence

ATGATGCTTCAGCCATGGCGCCGTCGATTTAAACTCCGTGGTATTACTTCGATGATGCCGATTGAGGAATCCTTATGGCGTACACGGGCGGTAGAAGGAGGAGGGTTCTTTTCTTCTTCAGCATCTGGGTATAGCAAGGGTTTGACCCTTCTCCTTTTGGGTCAAAAGGACGAAGATAAACCCATGAGAGTTTCTCCGTGGAATCATTACCAGTTGGTGGACCACGAATCAGAATCTGACCTCCAGCTGGCTTCCACAAAGAACCGCATTTCCCGCGGCTGTGCCTCCTTTGTTTGCTTTGGTCGCACTTCCGCAGGGCTCGACAGTTCCCCTTCTCCTCTTAAAGTTGGCCCAACCTTACCACATGATTCTTTGCCTGGGTCTATAAGTACCGATGAGGGGAAAGATGAAATTCCTGTGGAAGATGGTAATACTTTCAGAAATATAGCCCTTAAAAGTAGCTTGAAAAGGCCAAGTAATGGTATTTCAATTTCTCATCAGAATTCTCATGAAAGTGAAACAATGAGTAAAAAGGATGGTGATATACGTTGTCTTACTAATAGAAGGAAAGTTCAGTGGACTGATGCTTGTGGGAGTGAACTTGTAGAGATCAGGGAATTTGAGCCCAGTGAAGCAGATCTTTCCGATGACGAGTTCGAAAATGGAAACAAGAGAAGTAGGATGCTGCAGTTTTGCCAGACATAA

Coding sequence (CDS)

ATGATGCTTCAGCCATGGCGCCGTCGATTTAAACTCCGTGGTATTACTTCGATGATGCCGATTGAGGAATCCTTATGGCGTACACGGGCGGTAGAAGGAGGAGGGTTCTTTTCTTCTTCAGCATCTGGGTATAGCAAGGGTTTGACCCTTCTCCTTTTGGGTCAAAAGGACGAAGATAAACCCATGAGAGTTTCTCCGTGGAATCATTACCAGTTGGTGGACCACGAATCAGAATCTGACCTCCAGCTGGCTTCCACAAAGAACCGCATTTCCCGCGGCTGTGCCTCCTTTGTTTGCTTTGGTCGCACTTCCGCAGGGCTCGACAGTTCCCCTTCTCCTCTTAAAGTTGGCCCAACCTTACCACATGATTCTTTGCCTGGGTCTATAAGTACCGATGAGGGGAAAGATGAAATTCCTGTGGAAGATGGTAATACTTTCAGAAATATAGCCCTTAAAAGTAGCTTGAAAAGGCCAAGTAATGGTATTTCAATTTCTCATCAGAATTCTCATGAAAGTGAAACAATGAGTAAAAAGGATGGTGATATACGTTGTCTTACTAATAGAAGGAAAGTTCAGTGGACTGATGCTTGTGGGAGTGAACTTGTAGAGATCAGGGAATTTGAGCCCAGTGAAGCAGATCTTTCCGATGACGAGTTCGAAAATGGAAACAAGAGAAGTAGGATGCTGCAGTTTTGCCAGACATAA

Protein sequence

MMLQPWRRRFKLRGITSMMPIEESLWRTRAVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNRISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIPVEDGNTFRNIALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFEPSEADLSDDEFENGNKRSRMLQFCQT
Homology
[Close]
BLAST of Clc08G03090 vs. NCBI nr
Match: XP_038884674.1 (uncharacterized protein LOC120075392 [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.6e-99
Identity = 188/198 (94.95%), Postives = 191/198 (96.46%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKN 
Sbjct: 4   AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNH 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           IS GCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPG IST+E KDE P VEDGNTFRN
Sbjct: 64  ISHGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGPISTEERKDEFPNVEDGNTFRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLKRPSNGISISHQN+HESET+SKKDGDIRCLTNRRKVQWTDACGSELVEIREFE
Sbjct: 124 IALKSSLKRPSNGISISHQNAHESETISKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEADLSDDEFENGNKRS
Sbjct: 184 PSEADLSDDEFENGNKRS 201

[Close]
BLAST of Clc08G03090 vs. NCBI nr
Match: XP_022155858.1 (uncharacterized protein LOC111022876 isoform X2 [Momordica charantia])

HSP 1 Score: 359.8 bits (922), Expect = 1.8e-95
Identity = 180/198 (90.91%), Postives = 188/198 (94.95%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPG +ST+ GKDE+P V DGN+ RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGPLSTNTGKDEVPIVNDGNSLRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLK+P+NGISISHQN+HESETMSKKDGDIRC T+RRKVQW DACGSELVEIREFE
Sbjct: 124 IALKSSLKKPNNGISISHQNAHESETMSKKDGDIRCPTDRRKVQWNDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEA LSDDE ENGNKRS
Sbjct: 184 PSEAGLSDDELENGNKRS 201

[Close]
BLAST of Clc08G03090 vs. NCBI nr
Match: KAG7025134.1 (hypothetical protein SDJN02_13957, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.6 bits (919), Expect = 4.1e-95
Identity = 183/207 (88.41%), Postives = 191/207 (92.27%), Query Frame = 0 

Query: 21  IEESLWRTRAVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESD 80
           IE S W T  VEGGGFFS+SASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESD
Sbjct: 14  IEASFWCTWTVEGGGFFSASASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESD 73

Query: 81  LQLASTKNRISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP- 140
           LQLASTKNRISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGS S D+ KDE P 
Sbjct: 74  LQLASTKNRISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSKSIDKVKDETPN 133

Query: 141 VEDGNTFRNIALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGS 200
           VEDG+T RNIALKSSLKRPSN +SISHQN+  SETMSKKDGDIRCLT+RRKVQWTDACGS
Sbjct: 134 VEDGSTLRNIALKSSLKRPSNVVSISHQNADVSETMSKKDGDIRCLTDRRKVQWTDACGS 193

Query: 201 ELVEIREFEPSEADLSDDEFENGNKRS 227
           ELVEIREFEPSEADLSDDEF++ NKRS
Sbjct: 194 ELVEIREFEPSEADLSDDEFDSENKRS 220

[Close]
BLAST of Clc08G03090 vs. NCBI nr
Match: KAG6592297.1 (hypothetical protein SDJN03_14643, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350.1 bits (897), Expect = 1.4e-92
Identity = 178/198 (89.90%), Postives = 187/198 (94.44%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFS+SASGYSKGLTLLLLGQKDEDKPM+VSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSASASGYSKGLTLLLLGQKDEDKPMKVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGS S D+ KDE P VEDG+T RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSKSIDKVKDETPNVEDGSTLRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLKRPSN +SISHQN+  SETMSKKDGDIRCLT+RRKVQWTDACGSELVEIREFE
Sbjct: 124 IALKSSLKRPSNVVSISHQNADVSETMSKKDGDIRCLTDRRKVQWTDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEADLSDDEF++ NKRS
Sbjct: 184 PSEADLSDDEFDSENKRS 201

[Close]
BLAST of Clc08G03090 vs. NCBI nr
Match: XP_023536084.1 (uncharacterized protein LOC111797337 [Cucurbita pepo subsp. pepo] >XP_023536085.1 uncharacterized protein LOC111797337 [Cucurbita pepo subsp. pepo] >XP_023536086.1 uncharacterized protein LOC111797337 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.0 bits (894), Expect = 3.2e-92
Identity = 178/198 (89.90%), Postives = 186/198 (93.94%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFS+SASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSASASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGS S D+ KDE P VEDG+  RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSKSIDKVKDETPNVEDGSILRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLKRPSN +SISHQN+  SETMSKKDGDIRCLT+RRKVQWTDACGSELVEIREFE
Sbjct: 124 IALKSSLKRPSNVVSISHQNADVSETMSKKDGDIRCLTDRRKVQWTDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEADLSDDEF++ NKRS
Sbjct: 184 PSEADLSDDEFDSENKRS 201

[Close]
BLAST of Clc08G03090 vs. ExPASy TrEMBL
Match: A0A6J1DP18 (uncharacterized protein LOC111022876 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022876 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.8e-96
Identity = 180/198 (90.91%), Postives = 188/198 (94.95%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPG +ST+ GKDE+P V DGN+ RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGPLSTNTGKDEVPIVNDGNSLRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLK+P+NGISISHQN+HESETMSKKDGDIRC T+RRKVQW DACGSELVEIREFE
Sbjct: 124 IALKSSLKKPNNGISISHQNAHESETMSKKDGDIRCPTDRRKVQWNDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEA LSDDE ENGNKRS
Sbjct: 184 PSEAGLSDDELENGNKRS 201

[Close]
BLAST of Clc08G03090 vs. ExPASy TrEMBL
Match: A0A6J1EPJ6 (uncharacterized protein LOC111436656 OS=Cucurbita moschata OX=3662 GN=LOC111436656 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92
Identity = 178/198 (89.90%), Postives = 186/198 (93.94%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFS+SASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSASASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGS S D+ KDE P VEDG+T RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSKSIDKVKDETPNVEDGSTLRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLKRPSN +SISHQN+  SE MSKKDGDIRCLT+RRKVQWTDACGSELVEIREFE
Sbjct: 124 IALKSSLKRPSNVVSISHQNADVSEPMSKKDGDIRCLTDRRKVQWTDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEADLSDDEF++ NKRS
Sbjct: 184 PSEADLSDDEFDSENKRS 201

[Close]
BLAST of Clc08G03090 vs. ExPASy TrEMBL
Match: A0A6J1I989 (uncharacterized protein LOC111472690 OS=Cucurbita maxima OX=3661 GN=LOC111472690 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.7e-92
Identity = 177/198 (89.39%), Postives = 185/198 (93.43%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFS+SASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSASASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGS S D+ KDE P VEDG+  RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSKSIDKVKDETPNVEDGSILRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLKRPSN +SISHQN+  SE MSKKDGDIRCLT+RRKVQWTDACGSELVEIREFE
Sbjct: 124 IALKSSLKRPSNVVSISHQNADVSEPMSKKDGDIRCLTDRRKVQWTDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSEADLSDDEF++ NKRS
Sbjct: 184 PSEADLSDDEFDSENKRS 201

[Close]
BLAST of Clc08G03090 vs. ExPASy TrEMBL
Match: A0A6J1DQI3 (uncharacterized protein LOC111022876 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022876 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87
Identity = 165/181 (91.16%), Postives = 173/181 (95.58%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVD ESESDLQLASTKNR
Sbjct: 4   AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDQESESDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGNTFRN 149
           ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPG +ST+ GKDE+P V DGN+ RN
Sbjct: 64  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGPLSTNTGKDEVPIVNDGNSLRN 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           IALKSSLK+P+NGISISHQN+HESETMSKKDGDIRC T+RRKVQW DACGSELVEIREFE
Sbjct: 124 IALKSSLKKPNNGISISHQNAHESETMSKKDGDIRCPTDRRKVQWNDACGSELVEIREFE 183

[Close]
BLAST of Clc08G03090 vs. ExPASy TrEMBL
Match: A0A7J7BUX4 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW23G00381 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.8e-68
Identity = 142/198 (71.72%), Postives = 159/198 (80.30%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESDLQLASTKNR 89
           A+EGGGFFSSSASGYSKGLTLLLLGQK EDKPM+VSPWNHYQLVD E + DLQLASTKNR
Sbjct: 4   ALEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMKVSPWNHYQLVDQEPDPDLQLASTKNR 63

Query: 90  ISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKD-EIPVEDGNTFRN 149
           +SRGCASFVCFGRTSAG+D +PSPLKVGPT   D LPG + +DEGKD E  +   N  R 
Sbjct: 64  LSRGCASFVCFGRTSAGID-APSPLKVGPTQQQDVLPGPLVSDEGKDHETDLIHENNTRK 123

Query: 150 IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEIREFE 209
           I+LKSSLK+ S  IS   Q + + E +S+K  DI   T RRK+QWTDACGSELVEIREFE
Sbjct: 124 ISLKSSLKKRSKSISGLVQVTDQREALSEKGSDINGHTERRKLQWTDACGSELVEIREFE 183

Query: 210 PSEADLSDDEFENGNKRS 227
           PSE   SDDEFENGN+RS
Sbjct: 184 PSETVQSDDEFENGNERS 200

[Close]
BLAST of Clc08G03090 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50
Identity = 117/208 (56.25%), Postives = 144/208 (69.23%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESD--LQLASTK 89
           AVEGGG FS+SASGYSKGLTLL  G KD D+PMRV PWNHYQ+VD E E+D  LQL S K
Sbjct: 4   AVEGGGLFSASASGYSKGLTLLFSGDKDVDRPMRVVPWNHYQVVDQEPEADPVLQLDSIK 63

Query: 90  NRISRGC-ASFVCFGRTSAGLDSSPSPLKVGPTLPHD---SLPGS--ISTDEGKDEIPVE 149
           NR+SRGC ASF CFG  SAGL+ +PSPLKV P        S P S  + +++GKD+I   
Sbjct: 64  NRVSRGCAASFSCFGGASAGLE-TPSPLKVEPVQQQHREISSPESVVVVSEKGKDQISEA 123

Query: 150 DGNTFR---NIALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACG 209
           D  + +    ++L+SSLKRPS   S S ++  E ET+S    D+     RRKVQW DACG
Sbjct: 124 DNGSSKEAFKLSLRSSLKRPSVAESRSLEDIKEYETLSVDGSDLTGDMARRKVQWPDACG 183

Query: 210 SELVEIREFEPSEADLSDDEFENGNKRS 227
           SEL ++REFEPSE  LSD+E+E G +R+
Sbjct: 184 SELTQVREFEPSEMGLSDEEWEVGRQRT 210

[Close]
BLAST of Clc08G03090 vs. TAIR 10
Match: AT1G22790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50
Identity = 117/208 (56.25%), Postives = 144/208 (69.23%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRVSPWNHYQLVDHESESD--LQLASTK 89
           AVEGGG FS+SASGYSKGLTLL  G KD D+PMRV PWNHYQ+VD E E+D  LQL S K
Sbjct: 4   AVEGGGLFSASASGYSKGLTLLFSGDKDVDRPMRVVPWNHYQVVDQEPEADPVLQLDSIK 63

Query: 90  NRISRGC-ASFVCFGRTSAGLDSSPSPLKVGPTLPHD---SLPGS--ISTDEGKDEIPVE 149
           NR+SRGC ASF CFG  SAGL+ +PSPLKV P        S P S  + +++GKD+I   
Sbjct: 64  NRVSRGCAASFSCFGGASAGLE-TPSPLKVEPVQQQHREISSPESVVVVSEKGKDQISEA 123

Query: 150 DGNTFR---NIALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACG 209
           D  + +    ++L+SSLKRPS   S S ++  E ET+S    D+     RRKVQW DACG
Sbjct: 124 DNGSSKEAFKLSLRSSLKRPSVAESRSLEDIKEYETLSVDGSDLTGDMARRKVQWPDACG 183

Query: 210 SELVEIREFEPSEADLSDDEFENGNKRS 227
           SEL ++REFEPSE  LSD+E+E G +R+
Sbjct: 184 SELTQVREFEPSEMGLSDEEWEVGRQRT 210

[Close]
BLAST of Clc08G03090 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 146.4 bits (368), Expect = 3.0e-35
Identity = 94/204 (46.08%), Postives = 118/204 (57.84%), Query Frame = 0 

Query: 30  AVEGGGFFSSSASGYSKGLTLLLLGQKDEDKPMRV-SPWNHYQLVDHESESDLQLASTKN 89
           A EGGGFFSSSASGYS GL LLLLGQK E KP++V S WNHY LV  +S++  +L S+KN
Sbjct: 4   AAEGGGFFSSSASGYSNGLALLLLGQKTEQKPIKVSSQWNHYHLVLEDSDTGFRLDSSKN 63

Query: 90  RISRGCASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIP-VEDGN--- 149
            +S  C S +CFGR S  L+S                      +  KDE P VED N   
Sbjct: 64  WLSSACTSLICFGRKSERLES----------------------EGKKDEAPSVEDYNNCE 123

Query: 150 TFRNIALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKVQWTDACGSELVEI 209
                ALKSSLK+ S    +   +         +DG +  + +RRKVQW D CG E+ E+
Sbjct: 124 VTNRFALKSSLKKRSFSDVVIGDDD------VSRDGVVDHI-DRRKVQWPDTCGIEIAEV 178

Query: 210 REFEPSEADLSDDEFENGNKRSRM 229
           REFEPSE D S+DEF +G+ +S M
Sbjct: 184 REFEPSEVDESEDEFHHGSGKSCM 178

[Close]
BLAST of Clc08G03090 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 33/93 (35.48%), Postives = 47/93 (50.54%), Query Frame = 0 

Query: 129 ISTDEGKDEIPV--EDGNTFRN-IALKSSLKRPSNGISISHQNSHESETMSKKDGDIRCL 188
           ++  E ++E+    E+G    + + LKSSL++  +       NS E+E   KK       
Sbjct: 36  LTNAEDREEVDAKEEEGQIVGDTLTLKSSLRKVDS-------NSTEAEKREKK------- 95

Query: 189 TNRRKVQWTDACGSELVEIREFEPSEADLSDDE 219
               KVQW D  G EL EIREFEPS+ D  D +
Sbjct: 96  ----KVQWVDVIGKELAEIREFEPSDEDDIDSD 110

[Close]
BLAST of Clc08G03090 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.7e-04
Identity = 40/142 (28.17%), Postives = 61/142 (42.96%), Query Frame = 0 

Query: 94  CASFVCFGRTSAGLDSSPSPLKVGPTLPHDSLPGSISTDEGKDEIPVEDGNTFRNIAL-- 153
           C SF+CF + S  + +S S LK+  T P  S   ++  D   D+   +D +      +  
Sbjct: 22  CPSFICFCKPSPHIYASGS-LKLENTFPQVSSSTTVVDDRDHDDNDDDDAHVEEEEVVVD 81

Query: 154 --------------------KSSLKRPSNGISISHQNSHESETMSKKDGDIRCLTNRRKV 213
                               K   +  SNG  +  ++S + E +   DG  +    ++KV
Sbjct: 82  HVDGLLTEVVREEDCALEGKKEEEESLSNGEIL--KSSLKKEVLDSADGGRK---EKKKV 141

The following BLAST results are available for this feature:
BLAST of Clc08G03090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884674.11.6e-9994.95uncharacterized protein LOC120075392 [Benincasa hispida][more]
XP_022155858.11.8e-9590.91uncharacterized protein LOC111022876 isoform X2 [Momordica charantia][more]
KAG7025134.14.1e-9588.41hypothetical protein SDJN02_13957, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6592297.11.4e-9289.90hypothetical protein SDJN03_14643, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023536084.13.2e-9289.90uncharacterized protein LOC111797337 [Cucurbita pepo subsp. pepo] >XP_023536085.... [more]
BLAST of Clc08G03090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc08G03090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DP188.8e-9690.91uncharacterized protein LOC111022876 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1EPJ61.6e-9289.90uncharacterized protein LOC111436656 OS=Cucurbita moschata OX=3662 GN=LOC1114366... [more]
A0A6J1I9897.7e-9289.39uncharacterized protein LOC111472690 OS=Cucurbita maxima OX=3661 GN=LOC111472690... [more]
A0A6J1DQI31.2e-8791.16uncharacterized protein LOC111022876 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A7J7BUX47.8e-6871.72Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW23G00381 ... [more]
BLAST of Clc08G03090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22790.11.5e-5056.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G22790.21.5e-5056.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G34010.13.0e-3546.08unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G55475.12.7e-0435.48unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13480.12.7e-0428.17unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..141
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 30..225
NoneNo IPR availablePANTHERPTHR33401:SF3LOW AFFINITY POTASSIUM TRANSPORT SYSTEM PROTEINcoord: 30..225

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G03090.2Clc08G03090.2mRNA