Clc08G02230 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCCAACCCACCCAAAGTTCAAAACTCCTCATTAATAACTAAGGTAATCAGAGTGTAACTATATTTTGTAAATTTGATCTAAAATTATTGAATTAAAAATTTCATATTATGTAATCCACCACCCCATATTCCTTTATAAATATTTGGCCATTTCCTTTCCAAAATACCAACGCATCCAATTAACAAAATACAATACAATCTCAACTAGAAAAAAATACCATGTCGGAGGAAAACCGCCACCACGGCCACCACCACGGCCTCTTCCACCGCCACAAGGAGGAGGAAGGAAATCTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATACTCCAAAAACTCCACTTACTCTTCTGACCAATCTGAAAACAAAACCGCCGGTTATGGCGGTGGCTACGGCGACTCAGAAAATAAGTCGGCCGAATACGGCGGTGGCTATGGGGAGTCTCAAAATAAGGTCTCTGAGTACGGTGGTAGGTACGGTGGTTCGGAAGATAAAACTGGTGAATACGGCGGTGGTTATGGTACGTCTGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGGTACAGCGAGTCGGGGAATAAGGGCGGCGAGTACGGTGGTGGGTATGGTGAGTCCGAAGGTAAGGGCGGCGACTATGATGGTGGGTACAATAAGGGTGGATATAAATCCGGCGAGTACGGTGGTGGGTACGGTGGGTCGGAAGATAAAGGCAGCGAGTACGGCGGTGGATACAAGAAAGAATATGAGGAAGAAAAGGAAGAAGAGAATTCAGATTACAAAAAGGAAGAGAAACACCACAAACATCTTGAGCACCTCGGCGAGCTCGGTGCCGCCGCCGCCGGTGCCTTTGCCTTGGTATATCATATTTAATACACATTTTTATACCTCATGCATCAATCTTTTTTATAATTATTTTATTTTTGAAAAAAAAAATCAAAACTCTTTTAAAATCTAATTTTTATTTATTCCAAAAAGTTATCTTTTTAGTTATTTAGTTTGATTTCAATTTAGTTTTTAAATTTCAAATGGTTACAAATTTTGTTTCAATTTAGTCTCTTGGTAATTTAAAAATTTATCTTGATTTTTCGCTAAAAAATTACTTTCAATTTTGATGTTAATGTCTATTAATTAATTGAAATTAATTATAAAGTGAGATTTTAAAATTAACTTTAAAAGTGATAGAGAAAATAGTGAAATTTAATTATTTATAATTCTTTTAGATTAATTATTAGACATTAACATTAAAGACTAAAAGTAAATATTTAATGAAAAATTGAGGTTAAAAGTGTAAAATTTCAAAACAAACCAATTTGAAACAAAACTCAAACCTGAATGATATAATTAACTAAAATCGAACTCAAAACATAAAGACTAAAAATATAATATTTTAAAACCTAAATACTAAAGTGAAACTAGAGCCAACACTTAAAAAAAAGTAGAAATGCGTTTTTCTTTATTTTCTTTCTTATACATGAAAAAGTTTTGGAATGAAAGTAAAAAATATCAAACATTGTTATTTAAGAAAAAAAATGTTTTTTTTAAGTTCATTTTAAATGGATTTTCAAGTTACTAATACAAGCACAATTCAATTGGGATAGACTTTTTTTTTATTATTATTATTTTTTTTAATATGAAACAATAAGCCATACGTGCATCCTCAATGTATCTATCTTTTTTTAATTAACCTTAACTACACAAATGAAAGATTAAAAGATATTTAGAAAAGAAAGAACAACTTTGCATCAATCCAAGTATTTTTCTAAAACAATTCATATATGTGAAACTACTAATTAACACACACATCATATAGATTTTTAGGACTATAGTTTAAACTAATTTCTATTTTAATTTAGTACTTTTTGTCAAGATTTCGCATTCGAAAAGTGAATAAACTTCAAAATAACATTTATAGGATGTACGATTTACTCTTCTCAGTGTGAAATATTGATTTTGAGATGAAACTTCATGCATGTTAATTTATTTAATATTTTTTAATTATAAATTTAATTTTAAATTTTGATGTTTATGTTTATGTTTATTAGGTTATTTATAGTGATTCAAATTATACACGTGAAATTTGTCATGAGATGACACAAAGAAATATGGTTAGATGGATACGATAAAAAAGTAAGCCTAAAAGTGAACCTATACTTTGTTGTATTACAATTAGCCAATTTATCAATAATTAGTCTAACTCAAAATGTCTAATGCTTATCTACATTTAAATAATGACATACTGAAAATAAAAAGATTAGAAACATTTTTAATAGTTAGATGCAGAAAATAGACATATAATCATTGAAATTTAGTGATAAAAATTTTTAATTTGAATTTTTATATGGAAAATTATCTTAAATGACAAAACTACTTAAAATAATTACAACTAATAGCAAAATACATAGTTTATCTATGATAGACTGCAATAGATCGTGATAGACTACTATTTGTGTCTATTGCGATCTATCGTGGTCTATTATAGATAGATAGTGAAATTTTGATTTGTAAATATTTTGGTTCCTTTTGCTATATTTGAAAAGAACATTTTTTATTATTCATATATTTTTTGAACCTTAGACCTTTTAATTGATTTATCTTTTGCTAATAAATTGTCCTATAATATTTAATTAATTATTTTCTTGACATCATATAAACTTTGAATTTTATGCTTTGTAGATTCTAGTTGTGTCCTATTCAACTAAAGTGACTTAAGTACCACATGTTTGAGAATAGTTTTAAAATTGTTAAAGTTAGGGGAGTTCAAAGAACTCAATAACGTTAACGAAATTCATTCCATTCGGTTTGAATTGGGTTGGGTTTAAATAGATGAAAATGTTATTGGTTGGTTGGTTTATAGGTTCTCTTAAATAACCCAAACTAACTTAAACCAACCCGAACTTATAATAATTAATTTTAAAATGTATATTTCTTTTTACTTATGATAAAATAATAGATACATATATTTCTTTTTGTTTTATTTAATATCGTATTTTTTGGATAATTTTTTCTCTAACGACTCCTAAGAGCAATTTTTTAGTACTTTGGAAAAAAAAAAACTTTTCATAATATAAATTGAGATTGAGTTGTTAATTCTGATTCAATATATAAAAATAACTAAATAAATTTTTTACTTATTATCATTTTACTAATTTAAATAAATGATCCAATTAACCCGAACCATCCAAACTCAAGTGTTTCATGGTTGGATTGGGTTGGGTTGGGTTGGGTTGAGTTCATTTTTTAAATGAGTTATTTGAGTTGAAGAAATTTACAACATGAACAATTGGATCAGGTCTAAAAAGTTCTTAACCCAACCTACGAGCACCCTTAATTAAAATCAATTAGTTCATAAAATCACACAAAGCATGTTTTTTTGACCATTTAAAATTATTTTTAGTGGTACAAAAATCACATTTAAAAGCTTTAAATTTGATTGATTAAAAATATATGTATACAATTATTTTAACCGTTTCAAAATCAGTTCCAAATATGTACTAAAAAAAAATTTCTTTATATCAAGGTTACAATTTAGATATGACAACATACCAAAACAAGGATATTTTTACTCTTTTGATGAGTAAAACAAAAATATTTTTTAAAGTATAAAAGTATAATTAGAACAATAAAAGAAAAATTTGACCTTTGACCAATTATGTAATTGAACTGTTAATTTATAATATAATTTATTTAATGTCAATTTGTCTCAAGTGGATGATTCCATCACTCACCTTGTAATTATTGAAGTAAAAGCTAATTAAGTTTGAAATCATCTAAATTTTCATACTCGTTAAGAGGAAGAAACTAAAGTTTTCCATTGGCTCCGAATGTGTAATCTCAGCACGAGAAGCATGAGGCAAAGGAGGACACAGAGCATGGGCATAGGCACAAGTTAGAGGAGGAGATAGCGGCGGTAGCTGCCGTCGGAGCTGGTGGCTTTGCATTTCACGAGCACCATGAGAAGGAAGAGGCAAAAGAGCGAGATGAAGAGGCTCATGGAAAGAAGCATCACCATATATTCTAAATTAAACTTCCTATTTTTCCACAATAATATTGTCCATTTTAAAAAGTTAATTACTATCAAATACATGTGTTTTAAAACTTTTTAAAAAATAAATAATAAAAACGGTGTGTTTTGTAAAAGTTTGGTTTCAAAAGAAGTGTTTGGTCAAAGTCAATGTGCCATGTTCTATGATTTTGTCAAACATTTTTTTGGTAAGTTTTTAAAATTACATTTTTTTTTTTTTTTTTAAACTAAGTTTTAAAACCTGTTGTTTTATATGTATATTGTGTAATGTGTGGTCTTGTGAGTGCTTTCTCTCTGGGTTTGTTTTGTACTTCATTTTGGATTATGTTTCCTTTTTCTTGTTTAAAGAATTTAGAAATGGGTGTGGGAGGGGGTTGGAGATGTAATGTGTTTAGCTGTGCAATAATATTTAACTCTTGTCTTTTTTAATTTTATTTTAATATTCTTTGATTATACTAGTTAAGATATACACCTTAAAATAAGAGATCAAAAGTTCAAATATCCATCTCACCTTAACTAGTTTGACATCGTTCCATCATACCCTATGCTTCATCATACCCTATGCATATGATAATTGATATGTCCACCATCTTTTTTCATAAATCTTGGCATTGCCTTTACTTGGATATTTATTTCTTTCCCTTTATGCCCAATAATTCGTTTGTCCTTCAACTAGCCAATGCACTAGACCTGGTTGACGATTAGGGCTAGAGCAC AGCCAACCCACCCAAAGTTCAAAACTCCTCATTAATAACTAAGGTAATCAGAGTGTAACTATATTTTGTAAATTTGATCTAAAATTATTGAATTAAAAATTTCATATTATGTAATCCACCACCCCATATTCCTTTATAAATATTTGGCCATTTCCTTTCCAAAATACCAACGCATCCAATTAACAAAATACAATACAATCTCAACTAGAAAAAAATACCATGTCGGAGGAAAACCGCCACCACGGCCACCACCACGGCCTCTTCCACCGCCACAAGGAGGAGGAAGGAAATCTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATACTCCAAAAACTCCACTTACTCTTCTGACCAATCTGAAAACAAAACCGCCGGTTATGGCGGTGGCTACGGCGACTCAGAAAATAAGTCGGCCGAATACGGCGGTGGCTATGGGGAGTCTCAAAATAAGGTCTCTGAGTACGGTGGTAGGTACGGTGGTTCGGAAGATAAAACTGGTGAATACGGCGGTGGTTATGGTACGTCTGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGGTACAGCGAGTCGGGGAATAAGGGCGGCGAGTACGGTGGTGGGTATGGTGAGTCCGAAGGTAAGGGCGGCGACTATGATGGTGGGTACAATAAGGGTGGATATAAATCCGGCGAGTACGGTGGTGGGTACGGTGGGTCGGAAGATAAAGGCAGCGAGTACGGCGGTGGATACAAGAAAGAATATGAGGAAGAAAAGGAAGAAGAGAATTCAGATTACAAAAAGGAAGAGAAACACCACAAACATCTTGAGCACCTCGGCGAGCTCGGTGCCGCCGCCGCCGGTGCCTTTGCCTTGCACGAGAAGCATGAGGCAAAGGAGGACACAGAGCATGGGCATAGGCACAAGTTAGAGGAGGAGATAGCGGCGGTAGCTGCCGTCGGAGCTGGTGGCTTTGCATTTCACGAGCACCATGAGAAGGAAGAGGCAAAAGAGCGAGATGAAGAGGCTCATGGAAAGAAGCATCACCATATATTCTAAATTAAACTTCCTATTTTTCCACAATAATATTGTCCATTTTAAAAAGTTAATTACTATCAAATACATGTGTTTTAAAACTTTTTAAAAAATAAATAATAAAAACGGTGTGTTTTGTAAAAGTTTGGTTTCAAAAGAAGTGTTTGGTCAAAGTCAATGTGCCATGTTCTATGATTTTGTCAAACATTTTTTTGGTAAGTTTTTAAAATTACATTTTTTTTTTTTTTTTTAAACTAAGTTTTAAAACCTGTTGTTTTATATGTATATTGTGTAATGTGTGGTCTTGTGAGTGCTTTCTCTCTGGGTTTGTTTTGTACTTCATTTTGGATTATGTTTCCTTTTTCTTGTTTAAAGAATTTAGAAATGGGTGTGGGAGGGGGTTGGAGATGTAATGTGTTTAGCTGTGCAATAATATTTAACTCTTGTCTTTTTTAATTTTATTTTAATATTCTTTGATTATACTAGTTAAGATATACACCTTAAAATAAGAGATCAAAAGTTCAAATATCCATCTCACCTTAACTAGTTTGACATCGTTCCATCATACCCTATGCTTCATCATACCCTATGCATATGATAATTGATATGTCCACCATCTTTTTTCATAAATCTTGGCATTGCCTTTACTTGGATATTTATTTCTTTCCCTTTATGCCCAATAATTCGTTTGTCCTTCAACTAGCCAATGCACTAGACCTGGTTGACGATTAGGGCTAGAGCAC ATGTCGGAGGAAAACCGCCACCACGGCCACCACCACGGCCTCTTCCACCGCCACAAGGAGGAGGAAGGAAATCTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATACTCCAAAAACTCCACTTACTCTTCTGACCAATCTGAAAACAAAACCGCCGGTTATGGCGGTGGCTACGGCGACTCAGAAAATAAGTCGGCCGAATACGGCGGTGGCTATGGGGAGTCTCAAAATAAGGTCTCTGAGTACGGTGGTAGGTACGGTGGTTCGGAAGATAAAACTGGTGAATACGGCGGTGGTTATGGTACGTCTGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGGTACAGCGAGTCGGGGAATAAGGGCGGCGAGTACGGTGGTGGGTATGGTGAGTCCGAAGGTAAGGGCGGCGACTATGATGGTGGGTACAATAAGGGTGGATATAAATCCGGCGAGTACGGTGGTGGGTACGGTGGGTCGGAAGATAAAGGCAGCGAGTACGGCGGTGGATACAAGAAAGAATATGAGGAAGAAAAGGAAGAAGAGAATTCAGATTACAAAAAGGAAGAGAAACACCACAAACATCTTGAGCACCTCGGCGAGCTCGGTGCCGCCGCCGCCGGTGCCTTTGCCTTGCACGAGAAGCATGAGGCAAAGGAGGACACAGAGCATGGGCATAGGCACAAGTTAGAGGAGGAGATAGCGGCGGTAGCTGCCGTCGGAGCTGGTGGCTTTGCATTTCACGAGCACCATGAGAAGGAAGAGGCAAAAGAGCGAGATGAAGAGGCTCATGGAAAGAAGCATCACCATATATTCTAA MSEENRHHGHHHGLFHRHKEEEGNLPSETTPYSESQYSKNSTYSSDQSENKTAGYGGGYGDSENKSAEYGGGYGESQNKVSEYGGRYGGSEDKTGEYGGGYGTSENKVAAEYGGGYSESGNKGGEYGGGYGESEGKGGDYDGGYNKGGYKSGEYGGGYGGSEDKGSEYGGGYKKEYEEEKEEENSDYKKEEKHHKHLEHLGELGAAAAGAFALHEKHEAKEDTEHGHRHKLEEEIAAVAAVGAGGFAFHEHHEKEEAKERDEEAHGKKHHHIF Homology
BLAST of Clc08G02230 vs. NCBI nr
Match: XP_038886393.1 (keratin, type I cytoskeletal 9-like [Benincasa hispida]) HSP 1 Score: 389.4 bits (999), Expect = 2.5e-104 Identity = 224/274 (81.75%), Postives = 237/274 (86.50%), Query Frame = 0
BLAST of Clc08G02230 vs. NCBI nr
Match: XP_004138380.1 (glycine-rich cell wall structural protein 1.8 [Cucumis sativus] >KGN45863.1 hypothetical protein Csa_005251 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 1.7e-89 Identity = 211/303 (69.64%), Postives = 227/303 (74.92%), Query Frame = 0
BLAST of Clc08G02230 vs. NCBI nr
Match: XP_008463082.1 (PREDICTED: keratin, type I cytoskeletal 9-like [Cucumis melo]) HSP 1 Score: 314.3 bits (804), Expect = 1.0e-81 Identity = 203/289 (70.24%), Postives = 217/289 (75.09%), Query Frame = 0
BLAST of Clc08G02230 vs. NCBI nr
Match: XP_022932803.1 (keratin, type I cytoskeletal 9-like [Cucurbita moschata]) HSP 1 Score: 310.5 bits (794), Expect = 1.5e-80 Identity = 202/313 (64.54%), Postives = 228/313 (72.84%), Query Frame = 0
BLAST of Clc08G02230 vs. NCBI nr
Match: KAG6592258.1 (Abscisic stress-ripening protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 307.4 bits (786), Expect = 1.3e-79 Identity = 197/287 (68.64%), Postives = 224/287 (78.05%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy Swiss-Prot
Match: P37219 (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum OX=4081 GN=ASR2 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-26 Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy Swiss-Prot
Match: Q08655 (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum OX=4081 GN=ASR1 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25 Identity = 59/88 (67.05%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy Swiss-Prot
Match: A2ZBV1 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ASR5 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24 Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy Swiss-Prot
Match: Q53JF7 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ASR5 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24 Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy Swiss-Prot
Match: P37220 (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum OX=4081 GN=ASR3 PE=3 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23 Identity = 59/97 (60.82%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy TrEMBL
Match: A0A0A0K8U6 (Abscisic stress ripening-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014830 PE=3 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 8.5e-90 Identity = 211/303 (69.64%), Postives = 227/303 (74.92%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy TrEMBL
Match: A0A1S3CID8 (keratin, type I cytoskeletal 9-like OS=Cucumis melo OX=3656 GN=LOC103501317 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 5.0e-82 Identity = 203/289 (70.24%), Postives = 217/289 (75.09%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy TrEMBL
Match: A0A6J1F2S3 (keratin, type I cytoskeletal 9-like OS=Cucurbita moschata OX=3662 GN=LOC111439263 PE=3 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 7.2e-81 Identity = 202/313 (64.54%), Postives = 228/313 (72.84%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy TrEMBL
Match: A0A6J1ICX0 (keratin, type I cytoskeletal 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472650 PE=3 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 2.0e-62 Identity = 178/312 (57.05%), Postives = 211/312 (67.63%), Query Frame = 0
BLAST of Clc08G02230 vs. ExPASy TrEMBL
Match: A0A6J1DFD1 (uncharacterized protein At5g39570-like OS=Momordica charantia OX=3673 GN=LOC111019988 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 8.3e-61 Identity = 190/382 (49.74%), Postives = 214/382 (56.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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