Clc08G01890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G01890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Beta-galactosidase
Location	ClcChr08: 3633931 .. 3638168 (+)
RNA-Seq Expression	Clc08G01890
Synteny	Clc08G01890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGCTGTGCACAAGGAGAAATAATAAACGAGTCAGATGTGTCTAATGATTATTTGTCCTTGTACGACTCTATCACAAGAAGATTTATCACACCTGACGGTGCCTACTACTACTGCATGGTAAGCATCTTATTATGTAGTGTTTTTCAATTACATGCTAAGAATATTCTTTTATACTTATATTTTTTTTTATCGTGCAGAATAATTTTGTCCACGATGTGCACAATTACTCCTTAGAACACAATTTACCAGAGTTGAGTTTAATGTGTGAGCAAAACATGGTAAATGTTGAATAAATCATTCAACATACAAGGAGACTCAATGTTGCTGACACTGATCGAAAACGTATTCGTCGTAGACGACAGAAACAACGTGACGAAGGTGTTCTAGAGCAACCCGATGACCAAGAACCTCACATATTACAACCAGACATTGCATCCGGTTCTGGCCATCAACAGAAATATTATGCACACGATAAATTTCCATCTGTCGTCACCCAACAGGATATCGACAATGTAATCCACCAGCAACAACAAATTGAAGTGCCTGTGCCTCGTCGTGGACAACGTGCGCGAAGAAGACCACCATGTGACACTTGATTTGTATTTTAAATTTTCTGATTTGTATTAACTTTTTATCTTTAACTAAATGAATTAATGATTTTCCATTACATTTTCAAAAATTAAGAATCAATAAAACTAATACAATAATTGATGAACACAAGTAAGAAGCAAATTTTCATTTAAGTGGGTAATTAATTAATTAACTTATTTATCATGGGAAAAAAACCGGACGATTTTGGACGTATCATGGGAAAAGAACGGGGGTAAGAAGTCTTATTTATCAAAACTCGAACCATAAATACTATCCGAAATAGTGTAGGGTGCTTGATAATATTCCATTCCTTAAAAGCTTGTGAATACTAGAGCTAGTGAAACGGTAGCTACTAAAACGTAAACTGCTCGTTTGTCCTTCCCGCGATTATAGCATGATGAGTCCAAGTTGTTGCTGTTGCGGATGGAATGGGCAAACTCGTGGACCCGGTCCACGAGTTTGGTCAACACTCGTGGACCCGGTCCACGACTTACTTACACAACAACTGCCACATAAGAAATTTGAGTACCGGGTACACAATTTCACCACCCCAATTTCCAAATTACTTTCCAAACCACCCTATTTTTGTCATTAGTTTCTAAACCACCCTATTTTTCGAATTTTTTTTCAAAATAACATTATTCTTTAAAATACCCCCATAGATAACAATAAAGAGTTAGACTTCAAAATTTGAGAATTTCGTGCCTGTGTATTTTTGTGTCTTTAATGAGCTTTTTTGACATTTTATATGAGCTAAAGGTAAATTTTGTATATTTGTAATTAATTTTAGGTTTTGCTATTTTTACAATATTTAACCTATTTTGCTATATATGTGAGGAGCCCATAAATAGGAAAAAGTCTAACGTACATTTATTATTATTCCATTTTATTTTAAGTAAACTTTTGCTTTTTTAGTAGAGTAAATGTAAATCTTGACTGGCCAATCACAATTTGTTAGGTCCTTAATTTGAATTAATGAAATATTTATATAAATACATGTCATGTGAGTAATCGTTTGGTTTTTAAAGTAAATTTATTTCCTTTAATTGTTGAAATAGTTTGGATTTTTCAAGAGTTAAATTTTTAGCCAAATTTCAAAAAAAAAAAACAAAATTTTAAAAACTATTTTTTTTAGTATTCATAACTTGGTTTCATTTTTTAAAATATTGGTAAAAAGTAGATAACAAACCAAGAAATTTAGAGTTACAATAGGTGTTTATAAGCTTAATTTTGAAAAATTAAAAACTAAATAGCTTTATATACACATCGCCTAAATAAATTGGTCTAGTTACAAAATTATCTAAACTTTTCTATTTTTCACATGAATGGCCTAATAGCCTATTATTTCACACAAAAATCTAACCAAAATTATATTTTGCAGCTCTTCTTACCATTAAATCTTTTAAAATGCATATAATAATAATAATAAATTAAAAACAAAAAAAAAAAAAAAAGAAAGAAGAAGAAGAACAAGAGTTTCTTGCCATTAAACCTCCTAAATTGGTGTTTTCTTTCAAAACCTACATAACTAAGAAAAGTTTCTCCAAAAATCTAAAAAATTTTGCCCCATAAACGAAAATAAGGATCGCCAAGAAGCTTTAAAGCAGAAAGCAAGATGTATTTGATACATACAACACTATATATTTGAATTTTTTAAAAATAAACTAGGATATATTTGATAAATGCATGAGGAAGACAATTTGTATAATATATCGTCTTATATACCGAGCATGAACAATATGCAATATATATTTACAATCTTCAATATATTTGTAAACATACCAAAAAAAATTAACCATAATATATGCAATGTATATTTGTACATTATATTATCAATATAAACGACATATACTCGAGATCTCAATGGAGAGGTAATCAATTTTTAGTTGGGCCAAGGACCAATACCGACCCTTATGGAAGTCTATTCCGAGGTTTGTTTTGAGGAAAACAAATCCAGTGCTATGAACATCATAGCTACTCCCGTGACTGACTCTGTTGTCTTCAAAGCTAAATCATCTGGTTCTACTAGAGACAATCAAAATGGGAAACCACCTCTAGGGTGTGAGCACTGTAAGAAACCCTAGCATACAAAGGATTAGTGTTGGAAGTAACATGGTCGACCACCAAATGGCAAATGACGTCCTCCGAACGACAAGCCTAATTCTAGTCGGGTTCTGGTGAGTGAAACTGCTAGTAGTTCCCAACCATAACCTTAGGTGAACTGCCTAGCTAACCCTAGTGTCTCATCTCTTAGAACTATTGCCCAATCAGGTACATCTCAATCCTTGAGTCTCCTCAGTGTTAGTGTCAAGAAGCCTTAGATTCTTGATTCAGGAGCCACAGATCATCTGACTGGATCCTCTAATAATTTCCTCACATATCATTTGTGTGCTGGTAATGAAAAAATATGGATTGTTGATGGATCGTTTGCTTCGGTTGCGGGCAAAGGCCACATTTCTTCTTTTGATGGTTTGATATTACAGAATGTGTTGCATGTCCCTAAAATACCTTACAATTTATTGTCTATGAGTAAGATAACTAAAGATCTGAATTGTCGTGTGGTGTTCTCACCAGATGATGTTTTCCAAGACTTGAACTCGGGAACGATGATTGGCACTGTTCGGCACAATAGGGGACTCTATTTCCTTCATGATGATACTTCTTCTAGGTGTAGTTATAGGACTAGTTTGTTGTCATTCTATTTCTCAACTTACAAAAACAATTGTATGTTGTGGCATTTTCGTCTTGGCCAGCCAAATCTCCAATATATGAAATATTTATTTTCTTATTTGTTCAATAAAGTTGACATTTCCTCCTCGTCTTCTGACGTGTGTATTCGGGCGAAAGAACATATGGTCTCCTTTCCGTCCCAACCATACAAACCCTCTCAACCTTTCACCCTTATTCACAGTGATGTTTGAGGACCCTCAAGAGTTACAACCTCTTCGGGTAAGTGCTGGTTCGTGACCTTCATCGATAACCACACTCGCCTTACTTGGGTCTTTCTCCTCACTAATAAATCTGAGGTCTCATCCATTTTCCAACAATTTTATACTACCATTGAGACTCAGTTCAATGCCAAAATTGTCATCTTTCGGAGTGACAATGGTCGTGAGTTCCTAACTAATACCCTTCGTGAGTTTCTGTCCACTAAAGGTATTGTTCATGAGAGCTCATGTGCCTATACCCTTCAACAAAATGGAGTGACTGAAAGAAAAAATCGTCATCTCCTTGAAGTTGCCCGATCTCTCATGCTATCTACCTCTCTTCTGTCTTACTTGTTGGGGATGCAGTTTTGACTGTAGCTCACATTATAAATCGGAGAGGATGGGACCTAAGTTTGCTGTTAATAGGACATCCGTCGTCACCTTCTACGGTCATCTAAACTAGGAGGCAAATCATGAGGATACTGTTAGTGATGGTCCTCACATGATGACCAAGAGGTGGGGAGATTGAGGAACCCCAAGGCATACAGGAGGAGAGTTAGTTAGACCATATCCACAATCCTTTAGAACGTCGTTGAGCTTAGATGTTTACGTGGAGATGTCTGGTTTATCATGGATAGGCAAGATCTCTATTTCGCTCATGTAGGTTTTGACCCTCAACTCCGTAGGCCGAGTTCCCCAGGTTCTGATTCTTAG

mRNA sequence

ATGGACCGCTGTGCACAAGGAGAAATAATAAACGAGTCAGATGTGTCTAATGATTATTTGTCCTTGTACGACTCTATCACAAGAAGATTTATCACACCTGACGGTGCCTACTACTACTGCATGAATAATTTTGTCCACGATGTGCACAATTACTCCTTAGAACACAATTTACCAGAGTTGAGTTTAATGAGACTCAATGTTGCTGACACTGATCGAAAACGTATTCGTCGTAGACGACAGAAACAACGTGACGAAGGTGTTCTAGAGCAACCCGATGACCAAGAACCTCACATATTACAACCAGACATTGCATCCGGTTCTGGCCATCAACAGAAATATTATGCACACGATAAATTTCCATCTGTCGTCACCCAACAGGATATCGACAATGTAATCCACCAGCAACAACAAATTGAAGTGCCTGTGCCTCGTCGTGGACAACGTGCGCGAAGAAGACCACCATTCCAAGTTGTTGCTGTTGCGGATGGAATGGGCAAACTCGTGGACCCGGTCCACGAGTTTGGACCAATACCGACCCTTATGGAAGTCTATTCCGAGGTTTGTTTTGAGGAAAACAAATCCAGTGCTATGAACATCATAGCTACTCCCGTGACTGACTCTGTTGTCTTCAAAGCTAAATCATCTGGTTCTACTAGAGACAATCAAAATGGGAAACCACCTCTAGGGATTAGTGTTGGAAGTAACATGGTCGACCACCAAATGGCAAATGACGTCCTCCGAACGACAAGCCTAATTCTAGTGAACTGCCTAGCTAACCCTAGTGTCTCATCTCTTAGAACTATTGCCCAATCAGGAGCCACAGATCATCTGACTGGATCCTCTAATAATTTCCTCACATATCATTTGTGTGCTGGTAATGAAAAAATATGGATTGTTGATGGATCGTTTGCTTCGGTTGCGGGCAAAGGCCACATTTCTTCTTTTGATGGTTTGATATTACAGAATGTGTTGCATGTCCCTAAAATACCTTACAATTTATTGTCTATGAGTAAGATAACTAAAGATCTGAATTGTCGTGTGGTGTTCTCACCAGATGATGTTTTCCAAGACTTGAACTCGGGAACGATGATTGGCACTGTTCGGCACAATAGGGGACTCTATTTCCTTCATGATGATACTTCTTCTAGAGTTACAACCTCTTCGGGTAAGTGCTGGTTCGTGACCTTCATCGATAACCACACTCGCCTTACTTGGGTCTTTCTCCTCACTAATAAATCTGAGGTCTCATCCATTTTCCAACAATTTTATACTACCATTGAGACTCAGTTCAATGCCAAAATTGTCATCTTTCGGAGTGACAATGGTCGTGAGTTCCTAACTAATACCCTTCGTGAGTTTCTGTCCACTAAAGTTTTGACTGTAGCTCACATTATAAATCGGAGAGGATGGGACCTAAGTTTGCTGTTAATAGGACATCCGTCGTCACCTTCTACGAACGTCGTTGAGCTTAGATGTTTACGTGGAGATGTCTGGTTTATCATGGATAGGCAAGATCTCTATTTCGCTCATGTAGGTTTTGACCCTCAACTCCGTAGGCCGAGTTCCCCAGGTTCTGATTCTTAG

Coding sequence (CDS)

ATGGACCGCTGTGCACAAGGAGAAATAATAAACGAGTCAGATGTGTCTAATGATTATTTGTCCTTGTACGACTCTATCACAAGAAGATTTATCACACCTGACGGTGCCTACTACTACTGCATGAATAATTTTGTCCACGATGTGCACAATTACTCCTTAGAACACAATTTACCAGAGTTGAGTTTAATGAGACTCAATGTTGCTGACACTGATCGAAAACGTATTCGTCGTAGACGACAGAAACAACGTGACGAAGGTGTTCTAGAGCAACCCGATGACCAAGAACCTCACATATTACAACCAGACATTGCATCCGGTTCTGGCCATCAACAGAAATATTATGCACACGATAAATTTCCATCTGTCGTCACCCAACAGGATATCGACAATGTAATCCACCAGCAACAACAAATTGAAGTGCCTGTGCCTCGTCGTGGACAACGTGCGCGAAGAAGACCACCATTCCAAGTTGTTGCTGTTGCGGATGGAATGGGCAAACTCGTGGACCCGGTCCACGAGTTTGGACCAATACCGACCCTTATGGAAGTCTATTCCGAGGTTTGTTTTGAGGAAAACAAATCCAGTGCTATGAACATCATAGCTACTCCCGTGACTGACTCTGTTGTCTTCAAAGCTAAATCATCTGGTTCTACTAGAGACAATCAAAATGGGAAACCACCTCTAGGGATTAGTGTTGGAAGTAACATGGTCGACCACCAAATGGCAAATGACGTCCTCCGAACGACAAGCCTAATTCTAGTGAACTGCCTAGCTAACCCTAGTGTCTCATCTCTTAGAACTATTGCCCAATCAGGAGCCACAGATCATCTGACTGGATCCTCTAATAATTTCCTCACATATCATTTGTGTGCTGGTAATGAAAAAATATGGATTGTTGATGGATCGTTTGCTTCGGTTGCGGGCAAAGGCCACATTTCTTCTTTTGATGGTTTGATATTACAGAATGTGTTGCATGTCCCTAAAATACCTTACAATTTATTGTCTATGAGTAAGATAACTAAAGATCTGAATTGTCGTGTGGTGTTCTCACCAGATGATGTTTTCCAAGACTTGAACTCGGGAACGATGATTGGCACTGTTCGGCACAATAGGGGACTCTATTTCCTTCATGATGATACTTCTTCTAGAGTTACAACCTCTTCGGGTAAGTGCTGGTTCGTGACCTTCATCGATAACCACACTCGCCTTACTTGGGTCTTTCTCCTCACTAATAAATCTGAGGTCTCATCCATTTTCCAACAATTTTATACTACCATTGAGACTCAGTTCAATGCCAAAATTGTCATCTTTCGGAGTGACAATGGTCGTGAGTTCCTAACTAATACCCTTCGTGAGTTTCTGTCCACTAAAGTTTTGACTGTAGCTCACATTATAAATCGGAGAGGATGGGACCTAAGTTTGCTGTTAATAGGACATCCGTCGTCACCTTCTACGAACGTCGTTGAGCTTAGATGTTTACGTGGAGATGTCTGGTTTATCATGGATAGGCAAGATCTCTATTTCGCTCATGTAGGTTTTGACCCTCAACTCCGTAGGCCGAGTTCCCCAGGTTCTGATTCTTAG

Protein sequence

MDRCAQGEIINESDVSNDYLSLYDSITRRFITPDGAYYYCMNNFVHDVHNYSLEHNLPELSLMRLNVADTDRKRIRRRRQKQRDEGVLEQPDDQEPHILQPDIASGSGHQQKYYAHDKFPSVVTQQDIDNVIHQQQQIEVPVPRRGQRARRRPPFQVVAVADGMGKLVDPVHEFGPIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGKPPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRTIAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFASVAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDVFQDLNSGTMIGTVRHNRGLYFLHDDTSSRVTTSSGKCWFVTFIDNHTRLTWVFLLTNKSEVSSIFQQFYTTIETQFNAKIVIFRSDNGREFLTNTLREFLSTKVLTVAHIINRRGWDLSLLLIGHPSSPSTNVVELRCLRGDVWFIMDRQDLYFAHVGFDPQLRRPSSPGSDS

Homology

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BLAST of Clc08G01890 vs. NCBI nr
Match: TYK03453.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-67
Identity = 163/394 (41.37%), Postives = 205/394 (52.03%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGKP--------- 235
           P+P+LMEV  EVC EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 255 PLPSLMEVCFEVCLEEDRTNAMGVLTTPTIDSAAFSARSSNHDIDKNNGKSIPVCEHCKK 314

Query: 236 --------------PLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT----- 295
                         PLG    S+          +  T+    +   +P+ S  +T     
Sbjct: 315 QWHTKDQCWKLHGRPLGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTASQTKTPTLGA 374

Query: 296 ---------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFASV 355
                                I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A +
Sbjct: 375 IAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPI 434

Query: 356 AGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMIG 415
           AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  IG
Sbjct: 435 AGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIG 494

Query: 416 TVRHNRGLYFLHDDTS-------------------------------------------- 458
           T RH+RGLY L DDTS                                            
Sbjct: 495 TARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPSQ 554

[Close]

BLAST of Clc08G01890 vs. NCBI nr
Match: TYK11913.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-67
Identity = 153/307 (49.84%), Postives = 196/307 (63.84%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGKPPLGISVGSN 235
           P+P+LMEV  EV  EE++++AM+++ TP  DS  F A+++       NG P + +   S 
Sbjct: 156 PLPSLMEVCFEVRLEEDRTNAMDVLTTPTIDSAAFSARTA-----RNNGTPRISVE-NST 215

Query: 236 MVDHQMANDVLRTTSLI-LVNCLANPSVSSLRT-IAQSGATDHLTGSSNNFLTYHLCAGN 295
           +V  +     L   +   +   L   SV      I  SGATDHLTGSS +F++Y  CAGN
Sbjct: 216 IVPQETKTPTLGAIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGN 275

Query: 296 EKIWIVDGSFASVAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDD 355
           EKI I DGS A +AGKG I  FDG  L+NVLHVPK  YNLLS+S I  +L+C+V+F P+ 
Sbjct: 276 EKIRIADGSLAPIAGKGKIVPFDGSALRNVLHVPKPSYNLLSISNIACELHCKVIFLPES 335

Query: 356 V-FQDLNSGTMIGTVRHNRGLYFLHDDTS----------------------SRVTTSSGK 415
           + FQD++SG  IGT RH+RGLY L DDTS                      S+VTTSS K
Sbjct: 336 IYFQDMSSGRTIGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCPSKVTTSSEK 395

Query: 416 CWFVTFIDNHTRLTWVFLLTNKSEVSSIFQQFYTTIETQFNAKIVIFRSDNGREFLTNTL 458
            WFVTFID+HTRLTWV+L+T+KSEV SIFQ FY  I+TQF+ KI I RSDNGREF  + L
Sbjct: 396 RWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHVIKTQFHTKIAILRSDNGREFQNHNL 455

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BLAST of Clc08G01890 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-66
Identity = 165/395 (41.77%), Postives = 206/395 (52.15%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGK---------- 235
           P+P+LMEV  EV  EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 343 PLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKK 402

Query: 236 --------------PPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT---- 295
                         PP G    SN   +     +  TT     +   +P+VS  +T    
Sbjct: 403 QWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTP-ASTSQSTDPTVSQTKTPTLG 462

Query: 296 ----------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFAS 355
                                 I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A 
Sbjct: 463 AIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAP 522

Query: 356 VAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI 415
           +AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  I
Sbjct: 523 IAGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTI 582

Query: 416 GTVRHNRGLYFLHDDTS------------------------------------------- 458
           GT RH+RGLY L DDTS                                           
Sbjct: 583 GTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPS 642

[Close]

BLAST of Clc08G01890 vs. NCBI nr
Match: KAA0061456.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-66
Identity = 165/395 (41.77%), Postives = 206/395 (52.15%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGK---------- 235
           P+P+LMEV  EV  EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 302 PLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKK 361

Query: 236 --------------PPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT---- 295
                         PP G    SN   +     +  TT     +   +P+VS  +T    
Sbjct: 362 QWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTP-ASTSQSTDPTVSQTKTPTLG 421

Query: 296 ----------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFAS 355
                                 I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A 
Sbjct: 422 AIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAP 481

Query: 356 VAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI 415
           +AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  I
Sbjct: 482 IAGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTI 541

Query: 416 GTVRHNRGLYFLHDDTS------------------------------------------- 458
           GT RH+RGLY L DDTS                                           
Sbjct: 542 GTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPS 601

[Close]

BLAST of Clc08G01890 vs. NCBI nr
Match: TYK31050.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 1.1e-66
Identity = 165/395 (41.77%), Postives = 206/395 (52.15%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGK---------- 235
           P+P+LMEV  EV  EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 373 PLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKK 432

Query: 236 --------------PPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT---- 295
                         PP G    SN   +     +  TT     +   +P+VS  +T    
Sbjct: 433 QWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTP-ASTSQSTDPTVSQTKTPTLG 492

Query: 296 ----------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFAS 355
                                 I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A 
Sbjct: 493 AIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAP 552

Query: 356 VAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI 415
           +AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  I
Sbjct: 553 IAGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTI 612

Query: 416 GTVRHNRGLYFLHDDTS------------------------------------------- 458
           GT RH+RGLY L DDTS                                           
Sbjct: 613 GTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPS 672

[Close]

BLAST of Clc08G01890 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.5e-12
Identity = 100/471 (21.23%), Postives = 165/471 (35.03%), Query Frame = 0


Query: 162 DGMGKLVDPVHEFGPIPTLMEVYSEVCFEENKSSAMNII-ATPVTDSVV----------- 221
           D    ++D +      P+L E++  +   E+K  A+N     P+T +VV           
Sbjct: 159 DDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQ 218

Query: 222 ------------------FKAKSSGSTRDNQNGKPPLGISVGSNMVDH-----------Q 281
                             ++  SSGS  DN+  KP LG     ++  H           Q
Sbjct: 219 NNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQ 278

Query: 282 MANDVLRTTSLIL-----VNCLANPSVSSLRTIAQSGATDHLTGSSNNFLTYHLCAGNEK 341
              +  ++TS         N   N   ++   +  SGAT H+T   NN   +    G + 
Sbjct: 279 STTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDD 338

Query: 342 IWIVDGSFASVAGKGHIS---SFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPD 401
           + I DGS   +   G  S   S   L L  VL+VP I  NL+S+ ++       V F P 
Sbjct: 339 VMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPA 398

Query: 402 DV-FQDLNSGTMI----------------------------------------------- 461
               +DLN+G  +                                               
Sbjct: 399 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAIL 458

Query: 462 ------------------------------------GTVRHNRGLYFLHDDT-SSRVTTS 486
                                                T+  ++ L +++ D  SS + + 
Sbjct: 459 NSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWSSPILSI 518

[Close]

BLAST of Clc08G01890 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-10
Identity = 58/165 (35.15%), Postives = 78/165 (47.27%), Query Frame = 0


Query: 310 GHISSFDGLILQ----NVLHVPKIPYNL-LSMSKITKDLNCRVVFSPDDVFQDLNSGTMI 369
           GHIS  DG +L+    N+     +  NL LS       LN +    P   F+ L   T I
Sbjct: 423 GHIS--DGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLP---FKQLKDKTHI 482

Query: 370 GTVRHNRGLYFLHDDTSSRVT--TSSGKCWFVTFIDNHTRLTWVFLLTNKSEVSSIFQQF 429
                 R L+ +H D    +T  T   K +FV F+D  T     +L+  KS+V S+FQ F
Sbjct: 483 -----KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDF 542

Query: 430 YTTIETQFNAKIVIFRSDNGREFLTNTLREFLSTK----VLTVAH 464
               E  FN K+V    DNGRE+L+N +R+F   K     LTV H
Sbjct: 543 VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPH 577

[Close]

BLAST of Clc08G01890 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.5e-10
Identity = 73/324 (22.53%), Postives = 113/324 (34.88%), Query Frame = 0


Query: 263 SSLRTIAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFASVAGKGHIS---SFDGLI 322
           SS   +  SGAT H+T   NN   +    G + + + DGS   ++  G  S       L 
Sbjct: 327 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLN 386

Query: 323 LQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI-------------- 382
           L N+L+VP I  NL+S+ ++       V F P     +DLN+G  +              
Sbjct: 387 LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPI 446

Query: 383 ------------------------------------------------------------ 442
                                                                       
Sbjct: 447 ASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLIN 506

Query: 443 ---------GTVRHNRGLYFLHDDT-SSRVTTSSGKCWFVTFIDNHTRLTWVFLLTNKSE 486
                     T+   R L +++ D  SS + +     ++V F+D+ TR TW++ L  KS+
Sbjct: 507 KSNKVPFSQSTINSTRPLEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQ 566

[Close]

BLAST of Clc08G01890 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-07
Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 384 VTTSSGKCWFVTFIDNHTRLTWVFLLTNKSEVSSIFQQFYTTIETQFNAKIVIFRSDNGR 443
           + +  G  +FVTFID+ +R  WV++L  K +V  +FQ+F+  +E +   K+   RSDNG 
Sbjct: 494 IESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGG 553

Query: 444 EFLTNTLREFLST 457
           E+ +    E+ S+
Sbjct: 554 EYTSREFEEYCSS 566

[Close]

BLAST of Clc08G01890 vs. ExPASy Swiss-Prot
Match: O13527 (Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-A PE=3 SV=3)

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-04
Identity = 27/90 (30.00%), Postives = 45/90 (50.00%), Query Frame = 0


Query: 375 FLHDDTSSRV--TTSSGKCWFVTFIDNHTRLTWVFLLTNKSE--VSSIFQQFYTTIETQF 434
           +LH D    V     S   +F++F D  T+L WV+ L ++ E  +  +F      I+ QF
Sbjct: 108 YLHTDIFGPVHNLPKSAPSYFISFTDETTKLRWVYPLHDRREDSILDVFTTILAFIKNQF 167

Query: 435 NAKIVIFRSDNGREFLTNTLREFLSTKVLT 461
            A +++ + D G E+   TL +FL    +T
Sbjct: 168 QASVLVIQMDRGSEYTNRTLHKFLEKNGIT 197

[Close]

BLAST of Clc08G01890 vs. ExPASy TrEMBL
Match: A0A5D3BUT8 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00580 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.0e-68
Identity = 163/394 (41.37%), Postives = 205/394 (52.03%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGKP--------- 235
           P+P+LMEV  EVC EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 255 PLPSLMEVCFEVCLEEDRTNAMGVLTTPTIDSAAFSARSSNHDIDKNNGKSIPVCEHCKK 314

Query: 236 --------------PLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT----- 295
                         PLG    S+          +  T+    +   +P+ S  +T     
Sbjct: 315 QWHTKDQCWKLHGRPLGGKKRSSNEKQNSGRAYISETTPASTSQSTDPTASQTKTPTLGA 374

Query: 296 ---------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFASV 355
                                I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A +
Sbjct: 375 IAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAPI 434

Query: 356 AGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMIG 415
           AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  IG
Sbjct: 435 AGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTIG 494

Query: 416 TVRHNRGLYFLHDDTS-------------------------------------------- 458
           T RH+RGLY L DDTS                                            
Sbjct: 495 TARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPSQ 554

[Close]

BLAST of Clc08G01890 vs. ExPASy TrEMBL
Match: A0A5D3CJ13 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00790 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.0e-68
Identity = 153/307 (49.84%), Postives = 196/307 (63.84%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGKPPLGISVGSN 235
           P+P+LMEV  EV  EE++++AM+++ TP  DS  F A+++       NG P + +   S 
Sbjct: 156 PLPSLMEVCFEVRLEEDRTNAMDVLTTPTIDSAAFSARTA-----RNNGTPRISVE-NST 215

Query: 236 MVDHQMANDVLRTTSLI-LVNCLANPSVSSLRT-IAQSGATDHLTGSSNNFLTYHLCAGN 295
           +V  +     L   +   +   L   SV      I  SGATDHLTGSS +F++Y  CAGN
Sbjct: 216 IVPQETKTPTLGAIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGN 275

Query: 296 EKIWIVDGSFASVAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDD 355
           EKI I DGS A +AGKG I  FDG  L+NVLHVPK  YNLLS+S I  +L+C+V+F P+ 
Sbjct: 276 EKIRIADGSLAPIAGKGKIVPFDGSALRNVLHVPKPSYNLLSISNIACELHCKVIFLPES 335

Query: 356 V-FQDLNSGTMIGTVRHNRGLYFLHDDTS----------------------SRVTTSSGK 415
           + FQD++SG  IGT RH+RGLY L DDTS                      S+VTTSS K
Sbjct: 336 IYFQDMSSGRTIGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCPSKVTTSSEK 395

Query: 416 CWFVTFIDNHTRLTWVFLLTNKSEVSSIFQQFYTTIETQFNAKIVIFRSDNGREFLTNTL 458
            WFVTFID+HTRLTWV+L+T+KSEV SIFQ FY  I+TQF+ KI I RSDNGREF  + L
Sbjct: 396 RWFVTFIDDHTRLTWVYLITDKSEVPSIFQNFYHVIKTQFHTKIAILRSDNGREFQNHNL 455

[Close]

BLAST of Clc08G01890 vs. ExPASy TrEMBL
Match: A0A5D3E603 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003080 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-67
Identity = 165/395 (41.77%), Postives = 206/395 (52.15%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGK---------- 235
           P+P+LMEV  EV  EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 373 PLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKK 432

Query: 236 --------------PPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT---- 295
                         PP G    SN   +     +  TT     +   +P+VS  +T    
Sbjct: 433 QWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTP-ASTSQSTDPTVSQTKTPTLG 492

Query: 296 ----------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFAS 355
                                 I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A 
Sbjct: 493 AIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAP 552

Query: 356 VAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI 415
           +AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  I
Sbjct: 553 IAGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTI 612

Query: 416 GTVRHNRGLYFLHDDTS------------------------------------------- 458
           GT RH+RGLY L DDTS                                           
Sbjct: 613 GTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPS 672

[Close]

BLAST of Clc08G01890 vs. ExPASy TrEMBL
Match: A0A5A7SQW1 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00190 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-67
Identity = 165/395 (41.77%), Postives = 206/395 (52.15%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGK---------- 235
           P+P+LMEV  EV  EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 343 PLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKK 402

Query: 236 --------------PPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT---- 295
                         PP G    SN   +     +  TT     +   +P+VS  +T    
Sbjct: 403 QWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTP-ASTSQSTDPTVSQTKTPTLG 462

Query: 296 ----------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFAS 355
                                 I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A 
Sbjct: 463 AIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAP 522

Query: 356 VAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI 415
           +AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  I
Sbjct: 523 IAGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTI 582

Query: 416 GTVRHNRGLYFLHDDTS------------------------------------------- 458
           GT RH+RGLY L DDTS                                           
Sbjct: 583 GTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPS 642

[Close]

BLAST of Clc08G01890 vs. ExPASy TrEMBL
Match: A0A5A7V4Q4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00120 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-67
Identity = 165/395 (41.77%), Postives = 206/395 (52.15%), Query Frame = 0


Query: 176 PIPTLMEVYSEVCFEENKSSAMNIIATPVTDSVVFKAKSSGSTRDNQNGK---------- 235
           P+P+LMEV  EV  EE++++AM ++ TP  DS  F A+SS    D  NGK          
Sbjct: 302 PLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPVCEHCKK 361

Query: 236 --------------PPLGISVGSNMVDHQMANDVLRTTSLILVNCLANPSVSSLRT---- 295
                         PP G    SN   +     +  TT     +   +P+VS  +T    
Sbjct: 362 QWHTKDQCWKLHGRPPGGKKRSSNEKQNSGRAYISETTP-ASTSQSTDPTVSQTKTPTLG 421

Query: 296 ----------------------IAQSGATDHLTGSSNNFLTYHLCAGNEKIWIVDGSFAS 355
                                 I  SGATDHLTGSS +F++Y  CAGNEKI I DGS A 
Sbjct: 422 AIAQSGMPQSLGLISVDGKNPWILDSGATDHLTGSSEHFISYAPCAGNEKIRIADGSLAP 481

Query: 356 VAGKGHISSFDGLILQNVLHVPKIPYNLLSMSKITKDLNCRVVFSPDDV-FQDLNSGTMI 415
           +AGKG I  FDG  LQNVLHVPK+ YNLLS+SKIT++L+C+ +F P+ V FQD++SG  I
Sbjct: 482 IAGKGQIVPFDGFALQNVLHVPKLSYNLLSISKITRELHCKAIFLPESVYFQDMSSGRTI 541

Query: 416 GTVRHNRGLYFLHDDTS------------------------------------------- 458
           GT RH+RGLY L DDTS                                           
Sbjct: 542 GTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDFDVSSLSCDVCIRAKQHRVSFPS 601

The following BLAST results are available for this feature:

BLAST of Clc08G01890 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03453.1	1.2e-67	41.37	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK11913.1	1.2e-67	49.84	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0031941.1	1.1e-66	41.77	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0061456.1	1.1e-66	41.77	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK31050.1	1.1e-66	41.77	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Clc08G01890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	3.5e-12	21.23	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	2.5e-10	35.15	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.5e-10	22.53	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	2.0e-07	35.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
O13527	1.2e-04	30.00	Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (stra...	[more]

BLAST of Clc08G01890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUT8	6.0e-68	41.37	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G0...	[more]
A0A5D3CJ13	6.0e-68	49.84	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G0...	[more]
A0A5D3E603	5.1e-67	41.77	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G0...	[more]
A0A5A7SQW1	5.1e-67	41.77	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G0...	[more]
A0A5A7V4Q4	5.1e-67	41.77	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00...	[more]

BLAST of Clc08G01890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 376..487 e-value: 2.2E-11 score: 45.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..110
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 377..457
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 377..457
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 367..454 score: 9.579744
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 376..455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G01890.2	Clc08G01890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding