Clc08G01880 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G01880
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionethylene-responsive transcription factor ERF022-like
LocationClcChr08: 3609884 .. 3610521 (+)
RNA-Seq ExpressionClc08G01880
SyntenyClc08G01880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACAAACTCCTAAACTTCAAAACTCAATTTACTTTCCTTGCTACTTCTTCTTCTTCAATCTCTACTCTCAATGACACAAGCTCAATCGCGACGTCTCAGAGTTAACGATTCGGTATCGAAGACCTTTCGAGGGGTTCGAAAGCGGAGTTGGGGTCGCTATGTCTCGGAGATACGGCTACCGGGGAAGAAAACGCGTGTATGGCTTGGCTCCTTCGCCTCCCCCGAGATGGCGGCTCGTGCCTATGACTCGGCAGCGGCATTTTTGAGAGGCACCTCCGCCGTGCTCAACTTCCCCGATTCTGTGAGCTCACTCCCACAGCCGGAGTCGTGCTCGAGAGAACACATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGCGAGAGATGGAAACTGAAGAGCGAGAGACAAGCAGTGGATGGAGTCCGACAACGTTCGAGCAGGTGAAGGAAGCGCCATTGTTGAGTCCATTGAGGTTGGGGCTTCTTGGCTTTGGACCAGCCTCAGATGAAGACACTTTGTTGTTACCAGCCTATTTCTAAATTTTTAACAATATACTTGAGTCAATTGACAATGATATATTACTTGTGTATTCATTTTGGGATGAATGTGAAGAAAGATTTGATTCTTTCATAGAA

mRNA sequence

CAACAAACTCCTAAACTTCAAAACTCAATTTACTTTCCTTGCTACTTCTTCTTCTTCAATCTCTACTCTCAATGACACAAGCTCAATCGCGACGTCTCAGAGTTAACGATTCGGTATCGAAGACCTTTCGAGGGGTTCGAAAGCGGAGTTGGGGTCGCTATGTCTCGGAGATACGGCTACCGGGGAAGAAAACGCGTGTATGGCTTGGCTCCTTCGCCTCCCCCGAGATGGCGGCTCGTGCCTATGACTCGGCAGCGGCATTTTTGAGAGGCACCTCCGCCGTGCTCAACTTCCCCGATTCTGTGAGCTCACTCCCACAGCCGGAGTCGTGCTCGAGAGAACACATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGCGAGAGATGGAAACTGAAGAGCGAGAGACAAGCAGTGGATGGAGTCCGACAACGTTCGAGCAGGTGAAGGAAGCGCCATTGTTGAGTCCATTGAGGTTGGGGCTTCTTGGCTTTGGACCAGCCTCAGATGAAGACACTTTGTTGTTACCAGCCTATTTCTAAATTTTTAACAATATACTTGAGTCAATTGACAATGATATATTACTTGTGTATTCATTTTGGGATGAATGTGAAGAAAGATTTGATTCTTTCATAGAA

Coding sequence (CDS)

ATGACACAAGCTCAATCGCGACGTCTCAGAGTTAACGATTCGGTATCGAAGACCTTTCGAGGGGTTCGAAAGCGGAGTTGGGGTCGCTATGTCTCGGAGATACGGCTACCGGGGAAGAAAACGCGTGTATGGCTTGGCTCCTTCGCCTCCCCCGAGATGGCGGCTCGTGCCTATGACTCGGCAGCGGCATTTTTGAGAGGCACCTCCGCCGTGCTCAACTTCCCCGATTCTGTGAGCTCACTCCCACAGCCGGAGTCGTGCTCGAGAGAACACATTCAATCGGCAGCGGCAAAGGCAGCAGCGCAAATGCGAGAGATGGAAACTGAAGAGCGAGAGACAAGCAGTGGATGGAGTCCGACAACGTTCGAGCAGGTGAAGGAAGCGCCATTGTTGAGTCCATTGAGGTTGGGGCTTCTTGGCTTTGGACCAGCCTCAGATGAAGACACTTTGTTGTTACCAGCCTATTTCTAA

Protein sequence

MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPLRLGLLGFGPASDEDTLLLPAYF
Homology
[Close]
BLAST of Clc08G01880 vs. NCBI nr
Match: XP_038889152.1 (ethylene-responsive transcription factor ERF022-like [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 2.0e-66
Identity = 141/158 (89.24%), Postives = 144/158 (91.14%), Query Frame = 0 

Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ RRL  NDS+SK FRGVRKRSWGRYVSEIRLPGKK RVWLGSFASPEMAARAYDS
Sbjct: 25  MTQAQPRRLGTNDSISKPFRGVRKRSWGRYVSEIRLPGKKMRVWLGSFASPEMAARAYDS 84

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSG-WSP 120
           AAAFLRGTSAVLNFPDSV SLPQPESCSREHIQSAAAKAAAQMR+ME  E+ TSSG WSP
Sbjct: 85  AAAFLRGTSAVLNFPDSVGSLPQPESCSREHIQSAAAKAAAQMRDMEDGEQGTSSGSWSP 144

Query: 121 TTFEQVKEAPLLSPLRLGLLGFGPASD-EDTLLLPAYF 157
            TFEQVKEAPLLSPLRLGLLGFGP SD EDTLLL AYF
Sbjct: 145 RTFEQVKEAPLLSPLRLGLLGFGPVSDEEDTLLLSAYF 182

[Close]
BLAST of Clc08G01880 vs. NCBI nr
Match: XP_004141611.1 (ethylene-responsive transcription factor ERF022 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 2.2e-60
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 0 

Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ R L  + S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQPRHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMET-----EERETSS 120
           AAAFLRGTSA+LNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R MET     +++ T S
Sbjct: 61  AAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQGTRS 120

Query: 121 GWSPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           GWS T FEQVKE PLLSPLRLGLLGFGPA +E+   LLLP YF
Sbjct: 121 GWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]
BLAST of Clc08G01880 vs. NCBI nr
Match: XP_008459710.1 (PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo] >KAA0039355.1 ethylene-responsive transcription factor ERF022-like protein [Cucumis melo var. makuwa] >TYK00538.1 ethylene-responsive transcription factor ERF022-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 6.3e-60
Identity = 129/161 (80.12%), Postives = 138/161 (85.71%), Query Frame = 0 

Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ + LR N S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQQQHLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETE---ERETSSGW 120
           AAAFLRG SAVLNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R    E   ++ T SGW
Sbjct: 61  AAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRTRSGW 120

Query: 121 SPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           S T FEQVKE PLLSPLRLGLLGFGPA +E+  +LLLP YF
Sbjct: 121 SSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]
BLAST of Clc08G01880 vs. NCBI nr
Match: KAG6592285.1 (Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.8e-59
Identity = 129/155 (83.23%), Postives = 134/155 (86.45%), Query Frame = 0 

Query: 3   QAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 62
           Q   RRL  N SVS  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA
Sbjct: 7   QLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 66

Query: 63  AFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTF 122
            FLRGTSA+LNFPDSV SLPQPESCSREHIQSAAAKAAAQMREME  ER+ S+G S T F
Sbjct: 67  VFLRGTSALLNFPDSVGSLPQPESCSREHIQSAAAKAAAQMREMEVGERKASNGLSRTMF 126

Query: 123 EQVKEAPLLSPLRLGLLGFGPASD-EDTLLLPAYF 157
           E++KEAPLLSPLRL  LGFGPASD ED LLLP YF
Sbjct: 127 EEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 161

[Close]
BLAST of Clc08G01880 vs. NCBI nr
Match: XP_023536389.1 (ethylene-responsive transcription factor ERF022-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 129/155 (83.23%), Postives = 133/155 (85.81%), Query Frame = 0 

Query: 3   QAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 62
           Q   RRL  N SVS  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA
Sbjct: 7   QLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 66

Query: 63  AFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTF 122
            FLRGTSA+LNFPDSV SLPQPESCSREHIQSAAAKAAAQMREME  ER  S+G S T F
Sbjct: 67  VFLRGTSALLNFPDSVGSLPQPESCSREHIQSAAAKAAAQMREMEVGERRVSNGLSRTMF 126

Query: 123 EQVKEAPLLSPLRLGLLGFGPASD-EDTLLLPAYF 157
           E++KEAPLLSPLRL  LGFGPASD ED LLLP YF
Sbjct: 127 EEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 161

[Close]
BLAST of Clc08G01880 vs. ExPASy Swiss-Prot
Match: Q9LQ28 (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 GN=ERF022 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.9e-25
Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 0 

Query: 18  TFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDS 77
           ++RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA  LRG    LNFP+ 
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 78  VSSLPQPESCSREHIQSAAAKAAAQMR-------EMETEERETSSGWSPTTFEQVKEAPL 137
           V S P+PES S EHIQ+AA  AA   +        +E+ +  +  G SP   + + E+PL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

[Close]
BLAST of Clc08G01880 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-22
Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA  ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPL 135
            S P+P S S   IQ AA KAA     MET +  +SS  S  TF   + +  L  L
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA----HMETSQSFSSS--SSLTFSSSQSSSSLESL 145

[Close]
BLAST of Clc08G01880 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.3e-22
Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVR R+WG++VSEIR P KK+R+WLG+F++PEMAARA+D+AA  ++GTSAVLNFP+  
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 79  SSLPQPESCSREHIQSAAAKAAA 102
           + LP+P S S   +Q+AAA AAA
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAA 125

[Close]
BLAST of Clc08G01880 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 54/103 (52.43%), Postives = 76/103 (73.79%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVR RSWG++VSEIR P KKTR+WLG+F + +MAARA+D AA  ++G+SAVLNFP+  
Sbjct: 61  YRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELA 120

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTT 122
           S  P+P S S   IQ+AAA+AAA + E +  E++ +    P++
Sbjct: 121 SLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSS 163

[Close]
BLAST of Clc08G01880 vs. ExPASy Swiss-Prot
Match: Q1ECI2 (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 GN=ERF023 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-21
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           + GVRKR WG++VSEIR P KK+R+WLGSF  PEMAA+AYD AA  L+G  A LNFP+ +
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 79  SSLPQPESCSREHIQSAAAKAA 101
             LP+P +C+   IQ AAAKAA
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAA 126

[Close]
BLAST of Clc08G01880 vs. ExPASy TrEMBL
Match: A0A0A0KSQ8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647260 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 0 

Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ R L  + S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQPRHLGASGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMET-----EERETSS 120
           AAAFLRGTSA+LNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R MET     +++ T S
Sbjct: 61  AAAFLRGTSAILNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTMETMEGDGDQQGTRS 120

Query: 121 GWSPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           GWS T FEQVKE PLLSPLRLGLLGFGPA +E+   LLLP YF
Sbjct: 121 GWSSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPLLLLPTYF 163

[Close]
BLAST of Clc08G01880 vs. ExPASy TrEMBL
Match: A0A5D3BN59 (Ethylene-responsive transcription factor ERF022-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001480 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 129/161 (80.12%), Postives = 138/161 (85.71%), Query Frame = 0 

Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ + LR N S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQQQHLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETE---ERETSSGW 120
           AAAFLRG SAVLNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R    E   ++ T SGW
Sbjct: 61  AAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRTRSGW 120

Query: 121 SPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           S T FEQVKE PLLSPLRLGLLGFGPA +E+  +LLLP YF
Sbjct: 121 SSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]
BLAST of Clc08G01880 vs. ExPASy TrEMBL
Match: A0A1S3CAB8 (ethylene-responsive transcription factor ERF022-like OS=Cucumis melo OX=3656 GN=LOC103498753 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 129/161 (80.12%), Postives = 138/161 (85.71%), Query Frame = 0 

Query: 1   MTQAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60
           MTQAQ + LR N S++K FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS
Sbjct: 1   MTQAQQQHLRANGSITKPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDS 60

Query: 61  AAAFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETE---ERETSSGW 120
           AAAFLRG SAVLNFPDSVSSLPQPESCSREHIQ AAAKAAAQ+R    E   ++ T SGW
Sbjct: 61  AAAFLRGNSAVLNFPDSVSSLPQPESCSREHIQLAAAKAAAQVRTETVEGGDQQRTRSGW 120

Query: 121 SPTTFEQVKEAPLLSPLRLGLLGFGPASDED--TLLLPAYF 157
           S T FEQVKE PLLSPLRLGLLGFGPA +E+  +LLLP YF
Sbjct: 121 SSTMFEQVKEVPLLSPLRLGLLGFGPALNEEDPSLLLPTYF 161

[Close]
BLAST of Clc08G01880 vs. ExPASy TrEMBL
Match: A0A6J1EQQ6 (ethylene-responsive transcription factor ERF022-like OS=Cucurbita moschata OX=3662 GN=LOC111436651 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 128/155 (82.58%), Postives = 134/155 (86.45%), Query Frame = 0 

Query: 3   QAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 62
           Q   RRL  N SVS  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA
Sbjct: 7   QLIERRLGSNVSVSSPFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 66

Query: 63  AFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTF 122
            FLRGTSA+LNFPDS+ SLPQPESCSREHIQSAAAKAAAQMREME  ER+ S+G S T F
Sbjct: 67  VFLRGTSALLNFPDSIGSLPQPESCSREHIQSAAAKAAAQMREMEVGERKASNGLSRTMF 126

Query: 123 EQVKEAPLLSPLRLGLLGFGPASD-EDTLLLPAYF 157
           E++KEAPLLSPLRL  LGFGPASD ED LLLP YF
Sbjct: 127 EEMKEAPLLSPLRLAWLGFGPASDEEDNLLLPGYF 161

[Close]
BLAST of Clc08G01880 vs. ExPASy TrEMBL
Match: A0A6J1I976 (ethylene-responsive transcription factor ERF022-like OS=Cucurbita maxima OX=3661 GN=LOC111472680 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.6e-56
Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 0 

Query: 3   QAQSRRLRVNDSVSKTFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAA 62
           Q   RRL  N S+S +FRGVRK+SWGRYVSEIRLPGKKTRVWLGSFASP+M ARAYDSAA
Sbjct: 7   QLIERRLGSNVSISSSFRGVRKQSWGRYVSEIRLPGKKTRVWLGSFASPKMVARAYDSAA 66

Query: 63  AFLRGTSAVLNFPDSVSSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTF 122
            FLRGTSA+LNFPDSV SL QPESCSREHIQSAAAKAAAQMREME  ER  S+G S T F
Sbjct: 67  VFLRGTSALLNFPDSVGSLQQPESCSREHIQSAAAKAAAQMREMEVGERRASNGLSRTMF 126

Query: 123 EQVKEAPLLSPLRLGLLGFGPASD-EDTLLLPAYF 157
           E++KE PLLSPLRL  LG GPASD ED LLLP YF
Sbjct: 127 EEMKEVPLLSPLRLAWLGIGPASDEEDNLLLPDYF 161

[Close]
BLAST of Clc08G01880 vs. TAIR 10
Match: AT1G33760.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 6.4e-26
Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 0 

Query: 18  TFRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDS 77
           ++RG+R+R WG++VSEIR PGKKTR+WLGS+ + EMAA AYD+AA  LRG    LNFP+ 
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 78  VSSLPQPESCSREHIQSAAAKAAAQMR-------EMETEERETSSGWSPTTFEQVKEAPL 137
           V S P+PES S EHIQ+AA  AA   +        +E+ +  +  G SP   + + E+PL
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPDQIQAINESPL 138

[Close]
BLAST of Clc08G01880 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVRKR+WG++VSEIR P KK+R+WLG+F SPEMAARA+D AA  ++G SA+LNFPD  
Sbjct: 36  YRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLA 95

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTTFEQVKEAPLLSPL 135
            S P+P S S   IQ AA KAA     MET +  +SS  S  TF   + +  L  L
Sbjct: 96  GSFPRPSSLSPRDIQVAALKAA----HMETSQSFSSS--SSLTFSSSQSSSSLESL 145

[Close]
BLAST of Clc08G01880 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 6.6e-23
Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVR R+WG++VSEIR P KK+R+WLG+F++PEMAARA+D+AA  ++GTSAVLNFP+  
Sbjct: 43  YRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELA 102

Query: 79  SSLPQPESCSREHIQSAAAKAAA 102
           + LP+P S S   +Q+AAA AAA
Sbjct: 103 TYLPRPASSSPRDVQAAAAVAAA 125

[Close]
BLAST of Clc08G01880 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 54/103 (52.43%), Postives = 76/103 (73.79%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           +RGVR RSWG++VSEIR P KKTR+WLG+F + +MAARA+D AA  ++G+SAVLNFP+  
Sbjct: 61  YRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELA 120

Query: 79  SSLPQPESCSREHIQSAAAKAAAQMREMETEERETSSGWSPTT 122
           S  P+P S S   IQ+AAA+AAA + E +  E++ +    P++
Sbjct: 121 SLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSS 163

[Close]
BLAST of Clc08G01880 vs. TAIR 10
Match: AT1G01250.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0 

Query: 19  FRGVRKRSWGRYVSEIRLPGKKTRVWLGSFASPEMAARAYDSAAAFLRGTSAVLNFPDSV 78
           + GVRKR WG++VSEIR P KK+R+WLGSF  PEMAA+AYD AA  L+G  A LNFP+ +
Sbjct: 45  YHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEI 104

Query: 79  SSLPQPESCSREHIQSAAAKAA 101
             LP+P +C+   IQ AAAKAA
Sbjct: 105 EDLPRPSTCTPRDIQVAAAKAA 126

The following BLAST results are available for this feature:
BLAST of Clc08G01880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889152.12.0e-6689.24ethylene-responsive transcription factor ERF022-like [Benincasa hispida][more]
XP_004141611.12.2e-6079.75ethylene-responsive transcription factor ERF022 [Cucumis sativus][more]
XP_008459710.16.3e-6080.12PREDICTED: ethylene-responsive transcription factor ERF022-like [Cucumis melo] >... [more]
KAG6592285.11.8e-5983.23Ethylene-responsive transcription factor TINY, partial [Cucurbita argyrosperma s... [more]
XP_023536389.12.4e-5983.23ethylene-responsive transcription factor ERF022-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Clc08G01880 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LQ288.9e-2549.61Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 ... [more]
Q391272.4e-2253.45Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN... [more]
O806549.3e-2261.45Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LU183.5e-2152.43Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ... [more]
Q1ECI24.6e-2160.98Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Clc08G01880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSQ81.1e-6079.75AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647260 PE=... [more]
A0A5D3BN593.1e-6080.12Ethylene-responsive transcription factor ERF022-like protein OS=Cucumis melo var... [more]
A0A1S3CAB83.1e-6080.12ethylene-responsive transcription factor ERF022-like OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1EQQ61.2e-5982.58ethylene-responsive transcription factor ERF022-like OS=Cucurbita moschata OX=36... [more]
A0A6J1I9764.6e-5678.71ethylene-responsive transcription factor ERF022-like OS=Cucurbita maxima OX=3661... [more]
BLAST of Clc08G01880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G33760.16.4e-2649.61Integrase-type DNA-binding superfamily protein [more]
AT5G25810.11.7e-2353.45Integrase-type DNA-binding superfamily protein [more]
AT1G77200.16.6e-2361.45Integrase-type DNA-binding superfamily protein [more]
AT3G16280.12.5e-2252.43Integrase-type DNA-binding superfamily protein [more]
AT1G01250.13.3e-2260.98Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..112
NoneNo IPR availablePANTHERPTHR31985ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATEDcoord: 10..114
NoneNo IPR availablePANTHERPTHR31985:SF215ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKEcoord: 10..114
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 19..30
score: 57.42
coord: 57..77
score: 56.19
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 18..81
e-value: 2.5E-33
score: 126.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 19..67
e-value: 2.8E-11
score: 43.5
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 18..75
score: 20.916172
IPR001471AP2/ERF domainCDDcd00018AP2coord: 19..77
e-value: 3.63044E-19
score: 74.2303
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 17..76
e-value: 7.4E-24
score: 85.7
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 18..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G01880.1Clc08G01880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity