Clc08G01200 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G01200
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor ERF021
Location	ClcChr08: 1955070 .. 1955624 (+)
RNA-Seq Expression	Clc08G01200
Synteny	Clc08G01200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGCCTAGCTCAATGGGGAGCCACGGCGGTGCGACGTCGAGCTATCGCGGTGTTCGGAAGAGGAAATGGGGGAAATGGGTGTCGGAGATTCGAGAGCCGGGAAAGAAGACGAGAATTTGGTTGGGGAGCTTCGAGACCCCGGAGATGGCAGCAGCGGCCTATGACGTCGCTGCCTACCACTTCCGTGGTCGGGATGCTCGTCTCAACTTCCCGCATCTTGTCAACTCTCTTCCCTTCCCTCTTAGCTCTACTCCTGACGACATCCGTGTTGCCGCCCACGAGGCGGCGTTGCGGTTACGAACAACACCCGCGGTTGTGTCGGAGGGTGAGGAATCTTCAGCCTCGGGTCTTGCCCCAATCACTGTCCGACTGTCGCCGAGCCAAATTCAGGCGATTAATGAGTCAACGTTGGACTCGCCGAAGATGTGGATGCAAATGTCGTCGGAGAGTTTGCTTATGGAGGAGTTCTCAAATGGTACTGTGTTTGTTGATGACATGGACGATGAGATGTGGGAGAATATGCATAATGATTCGTTGTGGGATCCTTAG

mRNA sequence

ATGGGAGAGCCTAGCTCAATGGGGAGCCACGGCGGTGCGACGTCGAGCTATCGCGGTGTTCGGAAGAGGAAATGGGGGAAATGGGTGTCGGAGATTCGAGAGCCGGGAAAGAAGACGAGAATTTGGTTGGGGAGCTTCGAGACCCCGGAGATGGCAGCAGCGGCCTATGACGTCGCTGCCTACCACTTCCGTGGTCGGGATGCTCGTCTCAACTTCCCGCATCTTGTCAACTCTCTTCCCTTCCCTCTTAGCTCTACTCCTGACGACATCCGTGTTGCCGCCCACGAGGCGGCGTTGCGGTTACGAACAACACCCGCGGTTGTGTCGGAGGGTGAGGAATCTTCAGCCTCGGGTCTTGCCCCAATCACTGTCCGACTGTCGCCGAGCCAAATTCAGGCGATTAATGAGTCAACGTTGGACTCGCCGAAGATGTGGATGCAAATGTCGTCGGAGAGTTTGCTTATGGAGGAGTTCTCAAATGGTACTGTGTTTGTTGATGACATGGACGATGAGATGTGGGAGAATATGCATAATGATTCGTTGTGGGATCCTTAG

Coding sequence (CDS)

ATGGGAGAGCCTAGCTCAATGGGGAGCCACGGCGGTGCGACGTCGAGCTATCGCGGTGTTCGGAAGAGGAAATGGGGGAAATGGGTGTCGGAGATTCGAGAGCCGGGAAAGAAGACGAGAATTTGGTTGGGGAGCTTCGAGACCCCGGAGATGGCAGCAGCGGCCTATGACGTCGCTGCCTACCACTTCCGTGGTCGGGATGCTCGTCTCAACTTCCCGCATCTTGTCAACTCTCTTCCCTTCCCTCTTAGCTCTACTCCTGACGACATCCGTGTTGCCGCCCACGAGGCGGCGTTGCGGTTACGAACAACACCCGCGGTTGTGTCGGAGGGTGAGGAATCTTCAGCCTCGGGTCTTGCCCCAATCACTGTCCGACTGTCGCCGAGCCAAATTCAGGCGATTAATGAGTCAACGTTGGACTCGCCGAAGATGTGGATGCAAATGTCGTCGGAGAGTTTGCTTATGGAGGAGTTCTCAAATGGTACTGTGTTTGTTGATGACATGGACGATGAGATGTGGGAGAATATGCATAATGATTCGTTGTGGGATCCTTAG

Protein sequence

MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAPITVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDSLWDP

Homology

[Close]

BLAST of Clc08G01200 vs. NCBI nr
Match: XP_038890918.1 (ethylene-responsive transcription factor ERF021-like [Benincasa hispida])

HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92
Identity = 171/184 (92.93%), Postives = 177/184 (96.20%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MGEPSSMGSHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAA
Sbjct: 1   MGEPSSMGSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLA 120
           YHFRGRDARLNFPHL NSLPFPLSSTPDDIR+AAHEAALRLRTTP V SEG+E+ AS LA
Sbjct: 61  YHFRGRDARLNFPHLANSLPFPLSSTPDDIRLAAHEAALRLRTTPVVASEGDETFASRLA 120

Query: 121 PITVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDS 180
           P+TVRLSPSQIQAINESTLDSPKMWMQMSSESLLM+EFSNG+VFVDDMDDEMWENMHNDS
Sbjct: 121 PVTVRLSPSQIQAINESTLDSPKMWMQMSSESLLMDEFSNGSVFVDDMDDEMWENMHNDS 180

Query: 181 LWDP 185
           LWDP
Sbjct: 181 LWDP 184

[Close]

BLAST of Clc08G01200 vs. NCBI nr
Match: XP_008459604.1 (PREDICTED: ethylene-responsive transcription factor ERF021 [Cucumis melo] >KAA0039276.1 ethylene-responsive transcription factor ERF021 [Cucumis melo var. makuwa] >TYK00463.1 ethylene-responsive transcription factor ERF021 [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 9.3e-87
Identity = 168/188 (89.36%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MGEPSSM SHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAA
Sbjct: 1   MGEPSSMRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSE--GEESSASG 120
           YHFRGRDARLNFPHLVNSLPFPLSSTPDDIR+AAHEAALR+RTTPAV S   G+E+S  G
Sbjct: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPAVASSELGDETSTLG 120

Query: 121 LAPITVRLSPSQIQAINESTLDSPKMWMQMSSESLLM-EEFSNGTVFVDDM-DDEMWENM 180
           LAP+TVRLSPSQIQAINESTLDSP MWMQMSSES+LM +EFSNG VFVDDM DDEMWENM
Sbjct: 121 LAPVTVRLSPSQIQAINESTLDSPNMWMQMSSESMLMDQEFSNGNVFVDDMQDDEMWENM 180

Query: 181 HNDSLWDP 185
           HNDSLWDP
Sbjct: 181 HNDSLWDP 188

[Close]

BLAST of Clc08G01200 vs. NCBI nr
Match: XP_004141635.1 (ethylene-responsive transcription factor ERF021 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 2.5e-84
Identity = 167/192 (86.98%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MGEPSSM SHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAA
Sbjct: 1   MGEPSSMRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSE----GEESSA 120
           YHFRGRDARLNFPHLVNSLPFPLSSTPDDIR+AAHEAALR+RTTP V S     G+E+S 
Sbjct: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPVVASSDDQLGDETST 120

Query: 121 SGLAPITVRLSPSQIQAINESTLDSPKMWMQMSSESLLM-EEFSNGTVFVD-DMD--DEM 180
            GLAP+TVRLSPSQIQAINESTLDSPKMWMQMSSESLLM +EFSNG VFVD DM   D+M
Sbjct: 121 LGLAPVTVRLSPSQIQAINESTLDSPKMWMQMSSESLLMDQEFSNGNVFVDHDMQDYDQM 180

Query: 181 WENMHNDSLWDP 185
           WENMHNDSLWDP
Sbjct: 181 WENMHNDSLWDP 192

[Close]

BLAST of Clc08G01200 vs. NCBI nr
Match: XP_022925517.1 (ethylene-responsive transcription factor ERF021-like [Cucurbita moschata])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 155/184 (84.24%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MG+PSSMGSHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYD AA
Sbjct: 1   MGDPSSMGSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDAAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLA 120
           YHFRG DARLNFPHL NSLPFP  STPDDIR AAH AALR+RTTP VV+EG+ SS S +A
Sbjct: 61  YHFRGHDARLNFPHLANSLPFPNGSTPDDIRFAAHRAALRVRTTPGVVAEGDRSSTSSVA 120

Query: 121 PITVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDS 180
           P+TVRLSPSQIQAINES LDSPKMWM+MSS      EFSNGTVFVD+M+D MWENMHNDS
Sbjct: 121 PVTVRLSPSQIQAINESPLDSPKMWMEMSS------EFSNGTVFVDEMEDAMWENMHNDS 178

Query: 181 LWDP 185
           LWDP
Sbjct: 181 LWDP 178

[Close]

BLAST of Clc08G01200 vs. NCBI nr
Match: KAG6592363.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81
Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MG+PSS GSHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYD AA
Sbjct: 1   MGDPSSTGSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDAAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLA 120
           YHFRG DARLNFPHL NSLPFP  STPDDIR AAH AALR+RTTP VV+EG+ SS S +A
Sbjct: 61  YHFRGHDARLNFPHLANSLPFPNGSTPDDIRFAAHRAALRVRTTPGVVAEGDRSSTSSVA 120

Query: 121 PITVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDS 180
           P+TVRLSPSQIQAINES LDSPKMWM+MSS      EFSNGTVFVD+M+D MWENMHNDS
Sbjct: 121 PVTVRLSPSQIQAINESPLDSPKMWMEMSS------EFSNGTVFVDEMEDAMWENMHNDS 178

Query: 181 LWDP 185
           LWDP
Sbjct: 181 LWDP 178

[Close]

BLAST of Clc08G01200 vs. ExPASy Swiss-Prot
Match: Q9C9I2 (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 GN=ERF021 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47
Identity = 105/175 (60.00%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 12  GATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLN 71
           G  S+YRGVRKRKWGKWVSEIREPG K RIWLGSFETPEMAA AYDVAA+HFRGR+ARLN
Sbjct: 19  GVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLN 78

Query: 72  FPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVS--EGEESSASGLAPITVRLSPS 131
           FP L +SLP P  S+ D IR+A HEA L  RTT    S  + + SS+S +AP  VRLSP 
Sbjct: 79  FPELASSLPRPADSSSDSIRMAVHEATL-CRTTEGTESAMQVDSSSSSNVAPTMVRLSPR 138

Query: 132 QIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDSLWDP 185
           +IQAINESTL SP   M  + + +   EF+N      D++   WE   +D LWDP
Sbjct: 139 EIQAINESTLGSPTTMMHSTYDPM---EFAN------DVEMNAWETYQSDFLWDP 183

[Close]

BLAST of Clc08G01200 vs. ExPASy Swiss-Prot
Match: Q9LQ28 (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 GN=ERF022 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-38
Identity = 94/168 (55.95%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 16  SYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPHL 75
           SYRG+R+RKWGKWVSEIREPGKKTRIWLGS+ET EMAAAAYD AA H RGR   LNFP L
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 76  VNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAPITVRLSPSQIQAIN 135
           V+S P P SS+ + I+ AA +AAL  +  P  +SE    S  GL+   V LSP QIQAIN
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFK--PGRLSEPALESGQGLS--RVGLSPDQIQAIN 138

Query: 136 ESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDSLWD 184
           ES LDSP+M      E    EE   G  F     DE +E     S+W+
Sbjct: 139 ESPLDSPRMGWMQDLEVADYEEL-YGQFFGQHDRDEFFEMQQFQSIWN 181

[Close]

BLAST of Clc08G01200 vs. ExPASy Swiss-Prot
Match: Q1ECI2 (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 GN=ERF023 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.3e-26
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 6   SMGSHGGATSS-------YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDV 65
           S G  G  TSS       Y GVRKR+WGKWVSEIREP KK+RIWLGSF  PEMAA AYDV
Sbjct: 27  SCGGGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDV 86

Query: 66  AAYHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAA 99
           AA+  +GR A+LNFP  +  LP P + TP DI+VAA +AA
Sbjct: 87  AAFCLKGRKAQLNFPEEIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of Clc08G01200 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-24
Identity = 63/134 (47.01%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 16  SYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPHL 75
           ++RGVR R+WGKWVSEIREP KK+RIWLG+F T EMAA A+DVAA   +G  A LNFP L
Sbjct: 44  NFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPEL 103

Query: 76  VNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAPITVRLSPSQIQAIN 135
              LP P S+ P DI+ AA  AA  +    A+  + E SS S    +T   SP+ I   +
Sbjct: 104 AYHLPRPASADPKDIQAAAAAAAAAV----AIDMDVETSSPSPSPTVTETSSPAMIALSD 163

Query: 136 ESTLDSPKMWMQMS 150
           ++  D P + + ++
Sbjct: 164 DAFSDLPDLLLNVN 173

[Close]

BLAST of Clc08G01200 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.9e-24
Identity = 72/167 (43.11%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 8   GSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRD 67
           G   G    YRGVR R WGKWVSEIREP KK+RIWLG+F TPEMAA A+DVAA   +G  
Sbjct: 42  GRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTA 101

Query: 68  ARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAP-----I 127
           A LNFP L +S P P+S +P DI+ AA +AA    TT    S    SS S  +      +
Sbjct: 102 AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESLVL 161

Query: 128 TVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMD 170
            + LS ++ + + E  ++ P +      +S       N  VF D +D
Sbjct: 162 VMDLSRTESEELGE-IVELPSLGASYDVDS---ANLGNEFVFYDSVD 204

[Close]

BLAST of Clc08G01200 vs. ExPASy TrEMBL
Match: A0A5D3BL30 (Ethylene-responsive transcription factor ERF021 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00670 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87
Identity = 168/188 (89.36%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MGEPSSM SHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAA
Sbjct: 1   MGEPSSMRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSE--GEESSASG 120
           YHFRGRDARLNFPHLVNSLPFPLSSTPDDIR+AAHEAALR+RTTPAV S   G+E+S  G
Sbjct: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPAVASSELGDETSTLG 120

Query: 121 LAPITVRLSPSQIQAINESTLDSPKMWMQMSSESLLM-EEFSNGTVFVDDM-DDEMWENM 180
           LAP+TVRLSPSQIQAINESTLDSP MWMQMSSES+LM +EFSNG VFVDDM DDEMWENM
Sbjct: 121 LAPVTVRLSPSQIQAINESTLDSPNMWMQMSSESMLMDQEFSNGNVFVDDMQDDEMWENM 180

Query: 181 HNDSLWDP 185
           HNDSLWDP
Sbjct: 181 HNDSLWDP 188

[Close]

BLAST of Clc08G01200 vs. ExPASy TrEMBL
Match: A0A1S3CB31 (ethylene-responsive transcription factor ERF021 OS=Cucumis melo OX=3656 GN=LOC103498683 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87
Identity = 168/188 (89.36%), Postives = 175/188 (93.09%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MGEPSSM SHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAA
Sbjct: 1   MGEPSSMRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSE--GEESSASG 120
           YHFRGRDARLNFPHLVNSLPFPLSSTPDDIR+AAHEAALR+RTTPAV S   G+E+S  G
Sbjct: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPAVASSELGDETSTLG 120

Query: 121 LAPITVRLSPSQIQAINESTLDSPKMWMQMSSESLLM-EEFSNGTVFVDDM-DDEMWENM 180
           LAP+TVRLSPSQIQAINESTLDSP MWMQMSSES+LM +EFSNG VFVDDM DDEMWENM
Sbjct: 121 LAPVTVRLSPSQIQAINESTLDSPNMWMQMSSESMLMDQEFSNGNVFVDDMQDDEMWENM 180

Query: 181 HNDSLWDP 185
           HNDSLWDP
Sbjct: 181 HNDSLWDP 188

[Close]

BLAST of Clc08G01200 vs. ExPASy TrEMBL
Match: A0A0A0KXW9 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G649890 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 167/192 (86.98%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MGEPSSM SHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAA AYDVAA
Sbjct: 1   MGEPSSMRSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSE----GEESSA 120
           YHFRGRDARLNFPHLVNSLPFPLSSTPDDIR+AAHEAALR+RTTP V S     G+E+S 
Sbjct: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRLAAHEAALRVRTTPVVASSDDQLGDETST 120

Query: 121 SGLAPITVRLSPSQIQAINESTLDSPKMWMQMSSESLLM-EEFSNGTVFVD-DMD--DEM 180
            GLAP+TVRLSPSQIQAINESTLDSPKMWMQMSSESLLM +EFSNG VFVD DM   D+M
Sbjct: 121 LGLAPVTVRLSPSQIQAINESTLDSPKMWMQMSSESLLMDQEFSNGNVFVDHDMQDYDQM 180

Query: 181 WENMHNDSLWDP 185
           WENMHNDSLWDP
Sbjct: 181 WENMHNDSLWDP 192

[Close]

BLAST of Clc08G01200 vs. ExPASy TrEMBL
Match: A0A6J1EBX2 (ethylene-responsive transcription factor ERF021-like OS=Cucurbita moschata OX=3662 GN=LOC111432793 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 155/184 (84.24%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MG+PSSMGSHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYD AA
Sbjct: 1   MGDPSSMGSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDAAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLA 120
           YHFRG DARLNFPHL NSLPFP  STPDDIR AAH AALR+RTTP VV+EG+ SS S +A
Sbjct: 61  YHFRGHDARLNFPHLANSLPFPNGSTPDDIRFAAHRAALRVRTTPGVVAEGDRSSTSSVA 120

Query: 121 PITVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDS 180
           P+TVRLSPSQIQAINES LDSPKMWM+MSS      EFSNGTVFVD+M+D MWENMHNDS
Sbjct: 121 PVTVRLSPSQIQAINESPLDSPKMWMEMSS------EFSNGTVFVDEMEDAMWENMHNDS 178

Query: 181 LWDP 185
           LWDP
Sbjct: 181 LWDP 178

[Close]

BLAST of Clc08G01200 vs. ExPASy TrEMBL
Match: A0A6J1IG38 (ethylene-responsive transcription factor ERF021-like OS=Cucurbita maxima OX=3661 GN=LOC111472573 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.2e-81
Identity = 153/184 (83.15%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 1   MGEPSSMGSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAA 60
           MG+PSS GSHG ATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYD AA
Sbjct: 1   MGDPSSTGSHGAATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDAAA 60

Query: 61  YHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLA 120
           YHFRG DARLNFPHL NSLPFP  STPDDIR AAH AALR+RTTP V +EG+ SS S +A
Sbjct: 61  YHFRGHDARLNFPHLANSLPFPNGSTPDDIRFAAHRAALRVRTTPGVAAEGDRSSTSNVA 120

Query: 121 PITVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDS 180
           P+TVRLSPSQIQAINES LDSPKMWM+MSS      EFSNGTVFVD+M+D MWENMHNDS
Sbjct: 121 PVTVRLSPSQIQAINESPLDSPKMWMEMSS------EFSNGTVFVDEMEDAMWENMHNDS 178

Query: 181 LWDP 185
           LWDP
Sbjct: 181 LWDP 178

[Close]

BLAST of Clc08G01200 vs. TAIR 10
Match: AT1G71450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48
Identity = 105/175 (60.00%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 12  GATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLN 71
           G  S+YRGVRKRKWGKWVSEIREPG K RIWLGSFETPEMAA AYDVAA+HFRGR+ARLN
Sbjct: 19  GVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLN 78

Query: 72  FPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVS--EGEESSASGLAPITVRLSPS 131
           FP L +SLP P  S+ D IR+A HEA L  RTT    S  + + SS+S +AP  VRLSP 
Sbjct: 79  FPELASSLPRPADSSSDSIRMAVHEATL-CRTTEGTESAMQVDSSSSSNVAPTMVRLSPR 138

Query: 132 QIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDSLWDP 185
           +IQAINESTL SP   M  + + +   EF+N      D++   WE   +D LWDP
Sbjct: 139 EIQAINESTLGSPTTMMHSTYDPM---EFAN------DVEMNAWETYQSDFLWDP 183

[Close]

BLAST of Clc08G01200 vs. TAIR 10
Match: AT1G33760.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 9.1e-40
Identity = 94/168 (55.95%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 16  SYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPHL 75
           SYRG+R+RKWGKWVSEIREPGKKTRIWLGS+ET EMAAAAYD AA H RGR   LNFP L
Sbjct: 19  SYRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPEL 78

Query: 76  VNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAPITVRLSPSQIQAIN 135
           V+S P P SS+ + I+ AA +AAL  +  P  +SE    S  GL+   V LSP QIQAIN
Sbjct: 79  VDSFPRPESSSSEHIQAAAQDAALMFK--PGRLSEPALESGQGLS--RVGLSPDQIQAIN 138

Query: 136 ESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMDDEMWENMHNDSLWD 184
           ES LDSP+M      E    EE   G  F     DE +E     S+W+
Sbjct: 139 ESPLDSPRMGWMQDLEVADYEEL-YGQFFGQHDRDEFFEMQQFQSIWN 181

[Close]

BLAST of Clc08G01200 vs. TAIR 10
Match: AT1G01250.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.2e-27
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 6   SMGSHGGATSS-------YRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDV 65
           S G  G  TSS       Y GVRKR+WGKWVSEIREP KK+RIWLGSF  PEMAA AYDV
Sbjct: 27  SCGGGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDV 86

Query: 66  AAYHFRGRDARLNFPHLVNSLPFPLSSTPDDIRVAAHEAA 99
           AA+  +GR A+LNFP  +  LP P + TP DI+VAA +AA
Sbjct: 87  AAFCLKGRKAQLNFPEEIEDLPRPSTCTPRDIQVAAAKAA 126

[Close]

BLAST of Clc08G01200 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-25
Identity = 63/134 (47.01%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 16  SYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRDARLNFPHL 75
           ++RGVR R+WGKWVSEIREP KK+RIWLG+F T EMAA A+DVAA   +G  A LNFP L
Sbjct: 44  NFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPEL 103

Query: 76  VNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAPITVRLSPSQIQAIN 135
              LP P S+ P DI+ AA  AA  +    A+  + E SS S    +T   SP+ I   +
Sbjct: 104 AYHLPRPASADPKDIQAAAAAAAAAV----AIDMDVETSSPSPSPTVTETSSPAMIALSD 163

Query: 136 ESTLDSPKMWMQMS 150
           ++  D P + + ++
Sbjct: 164 DAFSDLPDLLLNVN 173

[Close]

BLAST of Clc08G01200 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 72/167 (43.11%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 8   GSHGGATSSYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAAAAYDVAAYHFRGRD 67
           G   G    YRGVR R WGKWVSEIREP KK+RIWLG+F TPEMAA A+DVAA   +G  
Sbjct: 42  GRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTA 101

Query: 68  ARLNFPHLVNSLPFPLSSTPDDIRVAAHEAALRLRTTPAVVSEGEESSASGLAP-----I 127
           A LNFP L +S P P+S +P DI+ AA +AA    TT    S    SS S  +      +
Sbjct: 102 AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESLVL 161

Query: 128 TVRLSPSQIQAINESTLDSPKMWMQMSSESLLMEEFSNGTVFVDDMD 170
            + LS ++ + + E  ++ P +      +S       N  VF D +D
Sbjct: 162 VMDLSRTESEELGE-IVELPSLGASYDVDS---ANLGNEFVFYDSVD 204

The following BLAST results are available for this feature:

BLAST of Clc08G01200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890918.1	1.9e-92	92.93	ethylene-responsive transcription factor ERF021-like [Benincasa hispida]	[more]
XP_008459604.1	9.3e-87	89.36	PREDICTED: ethylene-responsive transcription factor ERF021 [Cucumis melo] >KAA00...	[more]
XP_004141635.1	2.5e-84	86.98	ethylene-responsive transcription factor ERF021 [Cucumis sativus]	[more]
XP_022925517.1	3.1e-82	84.24	ethylene-responsive transcription factor ERF021-like [Cucurbita moschata]	[more]
KAG6592363.1	1.5e-81	83.70	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Clc08G01200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9I2	1.5e-47	60.00	Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LQ28	1.3e-38	55.95	Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q1ECI2	7.3e-26	62.00	Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZQP3	3.1e-24	47.01	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	8.9e-24	43.11	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Clc08G01200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BL30	4.5e-87	89.36	Ethylene-responsive transcription factor ERF021 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CB31	4.5e-87	89.36	ethylene-responsive transcription factor ERF021 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KXW9	1.2e-84	86.98	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G649890 PE=...	[more]
A0A6J1EBX2	1.5e-82	84.24	ethylene-responsive transcription factor ERF021-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1IG38	2.2e-81	83.15	ethylene-responsive transcription factor ERF021-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Clc08G01200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71450.1	1.1e-48	60.00	Integrase-type DNA-binding superfamily protein	[more]
AT1G33760.1	9.1e-40	55.95	Integrase-type DNA-binding superfamily protein	[more]
AT1G01250.1	5.2e-27	62.00	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	2.2e-25	47.01	ERF family protein 38	[more]
AT5G11590.1	6.3e-25	43.11	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 39..55 score: 60.11 coord: 17..28 score: 70.91
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 16..79 e-value: 1.8E-39 score: 147.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 15..65 e-value: 3.5E-13 score: 49.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 16..73 score: 23.959782
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 15..75 e-value: 1.39785E-24 score: 88.8679
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 16..75 e-value: 3.5E-26 score: 93.1
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 5..183
None	No IPR available	PANTHER	PTHR31985:SF111	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021	coord: 5..183
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 15..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G01200.2	Clc08G01200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060862	negative regulation of floral organ abscission
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity