Clc08G01080 (gene) Watermelon (cordophanus) v2

Overview
NameClc08G01080
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain-containing protein
LocationClcChr08: 1757410 .. 1758653 (+)
RNA-Seq ExpressionClc08G01080
SyntenyClc08G01080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAAACAATGATATGGACAGAATCAGGCTTCTCCCAGATTCTCTTCTTCATGACATTTTATCCTTTTTAGACACAAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCGGTGGAAGACCCTGTGGACTCACATTCCCACACTCAACTTTGATTTCAACTCCTTCCTAGATAGAGGGAAAATTAAAAATGCTCTGGATAATGGTATACAGTTTGATGTGAAGGGGCATCTACAATCAAAAGGAACATCCTTTAAGCGTTTTATATTGGAAGTCTTATCTCAACATAGTAGCAATTCCATTACAAAATTGAGTTACTCATTCCCCAGCCGCATTGAAGAGGATTTTGTGACAAAAGTCTTATGCTATGAGCAATGCCGGTGGGTTCAAGAATTTTACATCGCAACTTACAACGCAGATGAACCCAGTTGGGCATCTTTATCGGCTTGCACATTGCTGATTGTACTGAAGATTACATGTAGGCATGTGGATAACTTGGGGTCCTTGGTTTTACCTTGTTTGAGGATTTTAGAGATTAAAAGGGTATTTGATTTTATGTACTGGAATGATTATTTCTTGCCATACAATTGCATGCAGTCTTACAATAACTACTATGGAGACATAGGATTGAATGAAAACACATTCTCAGGCTGTCCAAATTTGGAATGTTTGGTTTTATTTGATTGCATTTTATATGCTGCTTGTATTTGTGCTCCAAAACTTGAGAAATTGGAGCTAATGGCTTTATTCCATGCATTTACTTTTCCAGAATTTGAGTTGTGTACACCAAATCTCAAAAGTGTTAAGTTTAGCAATGTAATACCTTGTGAGCTTAAGTGTTGTTCTGACATTGTGAACATACACCAAGTAAGTATAGCATTTGATTATTGTGACTTTGGAAGGGAATTATGCTTATTACAACAAAGGGTGGTGAAAAATATCTGTGAGCTGCTTAAAGTTTTTCATGATGTAGTCTCTCTTATTCTCCCTCCAAATACAACACAGGTATTTAATTTATTCCATCTATATTATTTCTTGTTTAATTTCATTCCTTTCCATATACTTTTTAATTTGTAAACATTCTTTTTCTAACTTTAGCCATTTTTATCTCTGCTTGCAAGGCCATCTTTAAAGCTCCTTCTTTAAGAAGATTGTCTTTTCAAAATTTGAGATATTTGAAAGAGTTCAAAGCAAAACGGACAGAGGAAACCATAGAGATTTTAGTTGACTCAACAATATAG

mRNA sequence

ATGTCTAAAAACAATGATATGGACAGAATCAGGCTTCTCCCAGATTCTCTTCTTCATGACATTTTATCCTTTTTAGACACAAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCGGTGGAAGACCCTGTGGACTCACATTCCCACACTCAACTTTGATTTCAACTCCTTCCTAGATAGAGGGAAAATTAAAAATGCTCTGGATAATGGTATACAGTTTGATGTGAAGGGGCATCTACAATCAAAAGGAACATCCTTTAAGCGTTTTATATTGGAAGTCTTATCTCAACATAGTAGCAATTCCATTACAAAATTGAGTTACTCATTCCCCAGCCGCATTGAAGAGGATTTTGTGACAAAAGTCTTATGCTATGAGCAATGCCGGTGGGTTCAAGAATTTTACATCGCAACTTACAACGCAGATGAACCCAGTTGGGCATCTTTATCGGCTTGCACATTGCTGATTGTACTGAAGATTACATGTAGGCATGTGGATAACTTGGGGTCCTTGGTTTTACCTTGTTTGAGGATTTTAGAGATTAAAAGGGTATTTGATTTTATGTACTGGAATGATTATTTCTTGCCATACAATTGCATGCAGTCTTACAATAACTACTATGGAGACATAGGATTGAATGAAAACACATTCTCAGGCTGTCCAAATTTGGAATGTTTGGTTTTATTTGATTGCATTTTATATGCTGCTTGTATTTGTGCTCCAAAACTTGAGAAATTGGAGCTAATGGCTTTATTCCATGCATTTACTTTTCCAGAATTTGAGTTGTGTACACCAAATCTCAAAAGTGTTAAGTTTAGCAATGTAATACCTTGTGAGCTTAAGTGTTGTTCTGACATTGTGAACATACACCAAGTAAGTATAGCATTTGATTATTGTGACTTTGGAAGGGAATTATGCTTATTACAACAAAGGGTGGTGAAAAATATCTGTGAGCTGCTTAAAGTTTTTCATGATGTAGTCTCTCTTATTCTCCCTCCAAATACAACACAGGCCATCTTTAAAGCTCCTTCTTTAAGAAGATTGTCTTTTCAAAATTTGAGATATTTGAAAGAGTTCAAAGCAAAACGGACAGAGGAAACCATAGAGATTTTAGTTGACTCAACAATATAG

Coding sequence (CDS)

ATGTCTAAAAACAATGATATGGACAGAATCAGGCTTCTCCCAGATTCTCTTCTTCATGACATTTTATCCTTTTTAGACACAAAACAAGTTGTTCAAACTTGTGTTCTCTCAAAGCGGTGGAAGACCCTGTGGACTCACATTCCCACACTCAACTTTGATTTCAACTCCTTCCTAGATAGAGGGAAAATTAAAAATGCTCTGGATAATGGTATACAGTTTGATGTGAAGGGGCATCTACAATCAAAAGGAACATCCTTTAAGCGTTTTATATTGGAAGTCTTATCTCAACATAGTAGCAATTCCATTACAAAATTGAGTTACTCATTCCCCAGCCGCATTGAAGAGGATTTTGTGACAAAAGTCTTATGCTATGAGCAATGCCGGTGGGTTCAAGAATTTTACATCGCAACTTACAACGCAGATGAACCCAGTTGGGCATCTTTATCGGCTTGCACATTGCTGATTGTACTGAAGATTACATGTAGGCATGTGGATAACTTGGGGTCCTTGGTTTTACCTTGTTTGAGGATTTTAGAGATTAAAAGGGTATTTGATTTTATGTACTGGAATGATTATTTCTTGCCATACAATTGCATGCAGTCTTACAATAACTACTATGGAGACATAGGATTGAATGAAAACACATTCTCAGGCTGTCCAAATTTGGAATGTTTGGTTTTATTTGATTGCATTTTATATGCTGCTTGTATTTGTGCTCCAAAACTTGAGAAATTGGAGCTAATGGCTTTATTCCATGCATTTACTTTTCCAGAATTTGAGTTGTGTACACCAAATCTCAAAAGTGTTAAGTTTAGCAATGTAATACCTTGTGAGCTTAAGTGTTGTTCTGACATTGTGAACATACACCAAGTAAGTATAGCATTTGATTATTGTGACTTTGGAAGGGAATTATGCTTATTACAACAAAGGGTGGTGAAAAATATCTGTGAGCTGCTTAAAGTTTTTCATGATGTAGTCTCTCTTATTCTCCCTCCAAATACAACACAGGCCATCTTTAAAGCTCCTTCTTTAAGAAGATTGTCTTTTCAAAATTTGAGATATTTGAAAGAGTTCAAAGCAAAACGGACAGAGGAAACCATAGAGATTTTAGTTGACTCAACAATATAG

Protein sequence

MSKNNDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCYEQCRWVQEFYIATYNADEPSWASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACICAPKLEKLELMALFHAFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYCDFGRELCLLQQRVVKNICELLKVFHDVVSLILPPNTTQAIFKAPSLRRLSFQNLRYLKEFKAKRTEETIEILVDSTI
Homology
BLAST of Clc08G01080 vs. NCBI nr
Match: XP_038890212.1 (F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida])

HSP 1 Score: 276.9 bits (707), Expect = 2.5e-70
Identity = 172/313 (54.95%), Postives = 199/313 (63.58%), Query Frame = 0

Query: 6   DMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSF-LDRGKIK 65
           DMD I  LPD LLH+IL+ LDT+QVVQTCVLSKRWK+LWTHIPTLNFD++SF   R  IK
Sbjct: 2   DMDGISHLPDYLLHEILALLDTRQVVQTCVLSKRWKSLWTHIPTLNFDYSSFPFQRLPIK 61

Query: 66  NALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCY 125
           +  +N         L SK  SF+RFI  VL QH S  I KLSYS+P   E+DFVT  L Y
Sbjct: 62  DLFNNFT-------LSSKACSFERFISGVLEQHRSECIKKLSYSYPIDAEKDFVTAFLSY 121

Query: 126 EQCRWVQEFYIATYNADEPSWASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKRVF 185
            QC  VQ+ +I TY A E  W+ LS   LL +LKITCR V +L +LVLPCLRILEIKR  
Sbjct: 122 GQCHNVQQLHITTYEAYESLWSCLSTFKLLTILKITCRPVSDLRTLVLPCLRILEIKRQL 181

Query: 186 DFMYW-NDYFL--PYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAA--CICA 245
           +  YW N Y+L   Y C       Y D+ LNENTFSG PNLE LVLFDC+L  A   I A
Sbjct: 182 N--YWDNPYYLDDEYLC-------YNDVKLNENTFSGYPNLESLVLFDCVLENAGIVIYA 241

Query: 246 PKLEKLELMALFHAFTFPEFELCTPNLKSVKFSNVIPC---ELKCCSDIVNIHQVSIAFD 305
           PKLE LEL A F   TF + E   PNLK+V+  N+IP    +    SD V I +VS A  
Sbjct: 242 PKLENLELDASFFGLTFLKLEFYAPNLKTVELRNIIPSVNYKSSYNSDFVYIDKVSSAVP 298

Query: 306 -YCDFGRELCLLQ 309
            Y D GRE  L Q
Sbjct: 302 CYDDLGREHPLQQ 298

BLAST of Clc08G01080 vs. NCBI nr
Match: XP_038890213.1 (uncharacterized protein LOC120079853 [Benincasa hispida])

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-52
Identity = 136/295 (46.10%), Postives = 183/295 (62.03%), Query Frame = 0

Query: 84  TSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCYEQCRWVQEFYIATYNADEP 143
           TSFKRF+L VL+Q     I KLSYS+ +     F+TK L Y      ++  I TY A++ 
Sbjct: 12  TSFKRFVLRVLTQRGGEYIQKLSYSYIAYDARHFLTKALAYAPIHRAKKLCINTYCANDL 71

Query: 144 SWASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEI-KRVFDFMYWNDYFLPYNCMQSY 203
            W+SLSAC  L +L+I+CR   +L SLVLP LR+L +   V DF  +  Y+  Y+C    
Sbjct: 72  LWSSLSACKFLTILQISCRVSSHLESLVLPSLRMLALGNGVGDFSSY-CYYSDYDCK--- 131

Query: 204 NNYYGDIGLNENTFSGCPNLECLVLFDCILYAACICAPKLEKLEL----MALFHAFTFPE 263
                D+ LNE+TFSGCPNLECL+LF  +  +A + APKL+ LEL    ++  +   FPE
Sbjct: 132 -----DMPLNESTFSGCPNLECLILFR-LRKSAHVFAPKLKNLELDNDTLSFSNKLYFPE 191

Query: 264 FELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYCDFGRELCLLQQRVVKNICEL 323
             LCTPNL+SV+F NVIPC LK  S+ V +H+V I  D   FGR     QQ++ +N+ +L
Sbjct: 192 LVLCTPNLRSVEFRNVIPC-LKSASEFVCVHKVYITVDNNYFGRG--RNQQKIKENLSQL 251

Query: 324 LKVFHDVVSLILPPNTTQAIFKAPSLRRLSFQNLRYLKEFKAKRTEETIEILVDS 374
           L+VFH+  S  LPPN  Q +FK+PSL   SF NLR+L EF+   ++E IE  V S
Sbjct: 252 LRVFHNATSFTLPPNAKQVMFKSPSLNGCSFHNLRHL-EFRTNWSKEMIEEPVSS 292

BLAST of Clc08G01080 vs. NCBI nr
Match: XP_022141790.1 (F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 9.9e-51
Identity = 132/276 (47.83%), Postives = 166/276 (60.14%), Query Frame = 0

Query: 6   DMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKN 65
           D+DRI LLPDSLLH ILS L+TK  VQTCVLSKRW+++W  IPTLNFDF+S+        
Sbjct: 2   DVDRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSY-------- 61

Query: 66  ALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCYE 125
                 +   + + +SK  SFKRFI +V+S+H    I KLSYS P     + +T  +CY 
Sbjct: 62  ----PFEESTRNNPKSKEKSFKRFIFKVMSEH-RGYIQKLSYSSPRFHGMNVMTLSICYA 121

Query: 126 QCRWVQEFYIATYNADEPSWASLSACTLLIVLKITCRHV---DNLGSLVLPCLRILEIKR 185
           QC  V+E YI   + D   W  LSAC  L VLK++  HV    +LGSLVLPCLRIL ++ 
Sbjct: 122 QCHNVKELYITADSYDSTIWC-LSACDFLTVLKVS--HVLVYHDLGSLVLPCLRILVVES 181

Query: 186 VFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDC-ILYAACICAPK 245
           ++    ++D              YG   LNE TF GCPNLECL L +   L + CI AP 
Sbjct: 182 LWKKPGYDD---------DGGGGYGREQLNEETFLGCPNLECLTLINYGDLESTCISAPT 241

Query: 246 LEKLELMALFH-AFTFPEFELCTPNLKSVKFSNVIP 277
           LE LE+ A  H   TFP+ +LCTPNLK  KF NV+P
Sbjct: 242 LESLEIGASSHWELTFPKLKLCTPNLKRAKFENVLP 252

BLAST of Clc08G01080 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 2.9e-50
Identity = 152/367 (41.42%), Postives = 198/367 (53.95%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNAL 67
           DRI LLPDSLLH ILS  +TK VVQTC+LSKRWKTLWT IPTLNFD+NSF        + 
Sbjct: 17  DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSF--------SS 76

Query: 68  DNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSY-SFPSRIEEDFVTKVLCYEQ 127
            +   +D +   +SK  SFK FI  VLS+H +  I KL+Y S P+  E   V  ++CY  
Sbjct: 77  SSSFNYDDE---ESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAG 136

Query: 128 CRWVQEFYIATYNADEPSW-ASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKRVFD 187
              VQ+  + TYN     W      C+ LI LK+ C  VD+ G L LP L+ILEI+    
Sbjct: 137 SHNVQQLCVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQ---- 196

Query: 188 FMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACICAPKLEKL 247
                     ++      NY G        FSGCPNLE LVL D +  +A I AP+LE  
Sbjct: 197 --------CDWSARDERANYDG-----ITMFSGCPNLESLVLVDYLFESATISAPRLENF 256

Query: 248 ELMALFH-AFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYCDFGREL 307
           +L A      TFP+ EL TP LK+V F NV+P  L+  S+   I +V I      F  + 
Sbjct: 257 KLCASHDMELTFPQVELLTPTLKAVNFVNVLPV-LESDSEFSCIQKVDIQLKDSVFTTDG 316

Query: 308 CLLQQRVVKNICELLKVFHDVVSLILPPNTTQAIFKAPSLRRLSFQNLRYLKEFKAKRTE 367
              Q+   K I +LL V H+  S  LP   TQ I    S + LSF N+R+L+  K K ++
Sbjct: 317 SQTQELKSKFI-DLLSVLHNASSFTLPMKATQVI---SSYKELSFHNMRHLR-LKTKESD 349

Query: 368 ETIEILV 372
             ++ L+
Sbjct: 377 LLLKHLL 349

BLAST of Clc08G01080 vs. NCBI nr
Match: XP_022141765.1 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-50
Identity = 138/302 (45.70%), Postives = 179/302 (59.27%), Query Frame = 0

Query: 3   KNNDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGK 62
           K   +DRI LLPDSLLH ILS L+T+QVVQTCVLSKRWKTLWT IPTLNFDF+S+  +  
Sbjct: 7   KKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQS 66

Query: 63  IKNALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKV- 122
           I+N+  +            K  SF+RFIL VLS+H   +I  L++S  SR  +D V+ + 
Sbjct: 67  IRNSSAS----------NPKEPSFERFILRVLSEHGCKNIITLNFSC-SRDSDDTVSLIE 126

Query: 123 --LCYEQCRWVQEFYIATYNADEPSW-ASLSACTLLIVLKITCRHVDNLGSLVLPCLRIL 182
             +CY     VQE  I+TY     +W   LS C+ L+VLKI C  VD+ G+L    LRIL
Sbjct: 127 WLICYAS-HVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRIL 186

Query: 183 EIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACIC 242
           EI+       W D          Y+  Y +I +    FSGCPNLE LVL + +  +A I 
Sbjct: 187 EIE-----CDWGD---------RYDRKYNEIEM----FSGCPNLESLVLVNYLFDSATIS 246

Query: 243 APKLEKLELMALFHAFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYC 301
           APKLE LEL A     + P+ EL  P+LK++KF NV+P  LK  S    IH+V+I  + C
Sbjct: 247 APKLENLELCA-----SXPQVELFAPSLKTLKFGNVLP-TLKSASKFACIHKVNIQVEDC 272

BLAST of Clc08G01080 vs. ExPASy Swiss-Prot
Match: Q9FJT1 (Putative FBD-associated F-box protein At5g56820 OS=Arabidopsis thaliana OX=3702 GN=At5g56820 PE=4 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 8.5e-13
Identity = 81/293 (27.65%), Postives = 125/293 (42.66%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNAL 67
           DRI  LPD LL  ILSF+ T   + T +LSKRWK +W  +PTL+ D +S  + G ++   
Sbjct: 15  DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLDEDSCRNIGTLR--F 74

Query: 68  DNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCYEQC 127
           D G    +K H     TS     L +     S+ I +L  +    + E  +T    Y   
Sbjct: 75  DEGCCMFLKSHEAPVLTS-----LNLKLMTPSHDIDRLLSNIKPILHEITITSYR-YSTI 134

Query: 128 RWVQEFYIATYNADEPSWASLSACTLLIVLKITCR-HVDNLGSLVLPCLRILEIKRVFDF 187
           R+ +               +L+ C  L+V+K+  +  VD    +    L+ L + RV   
Sbjct: 135 RFPR---------------NLNVCQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRV--- 194

Query: 188 MYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLF------DCILYAACICAP 247
                    Y+C +S+              S CP LE L LF      DC L +  I  P
Sbjct: 195 --------KYSCRESFT----------TLLSACPVLEDLDLFIGRVHYDC-LNSFTIWVP 254

Query: 248 KLEKLELMALFHAFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSI 294
            L++L +    + F    FE+  P+LK +K +    C  K   D+ N+ +  +
Sbjct: 255 SLQRLSICDESYRFRSTTFEISVPSLKYLKIACQDSC-FKFVEDMPNLVEAHV 261

BLAST of Clc08G01080 vs. ExPASy Swiss-Prot
Match: Q9LX55 (Putative F-box/LRR-repeat protein At3g59160 OS=Arabidopsis thaliana OX=3702 GN=At3g59160 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.2e-12
Identity = 79/292 (27.05%), Postives = 125/292 (42.81%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGK-IKNA 67
           D I  LPD+LL  +LS+L TK+   T +LS+RW+ L   +P L FD +++L R K +KN 
Sbjct: 13  DMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNP 72

Query: 68  LDN----GIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSF---PSRIEEDFVT 127
           L      G    V    +   TSF  F+  +L    ++ + K S         ++ D V 
Sbjct: 73  LHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNSPLDKFSLKMVDDHDPVDPDCVA 132

Query: 128 KVLCYEQCRWVQEFYIATYNADEPSWASLSACTLL--IVLKITCRHVD----NLGSLVLP 187
             +     R V + ++     D   W SL A   L   ++K+T +  D    ++  + LP
Sbjct: 133 PWIHKVLVRGVSDLHLV---IDMNEWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLP 192

Query: 188 CLRILEIKRV-FDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL---FD 247
            L+ L ++ V FD                      DIG ++   SGCP LE LVL   + 
Sbjct: 193 KLKTLHLESVMFD--------------------EEDIGFSK-LLSGCPELEELVLHHIWS 252

Query: 248 CILYAACICAPKLEKLEL------MALFHAFTFPEFELCTPNLKSVKFSNVI 276
           C+  +  +    L++L            H          TPNL  ++++ VI
Sbjct: 253 CVWTSCSVSVATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVI 280

BLAST of Clc08G01080 vs. ExPASy Swiss-Prot
Match: Q9FZ52 (F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana OX=3702 GN=At1g16930 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.4e-12
Identity = 63/225 (28.00%), Postives = 102/225 (45.33%), Query Frame = 0

Query: 3   KNNDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGK 62
           K  + DRI  LPDSLL  ILS L TK+ V T VLSKRW+ LW H+P L+ D N+F D   
Sbjct: 10  KQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDV 69

Query: 63  IKNALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVL 122
             + ++  +  + + HL+     FK  ++  +++H ++              + ++  V+
Sbjct: 70  FVSFVNRFLGSENEQHLE----RFK--LIYEVNEHDASRF------------KSWINAVI 129

Query: 123 CYEQCRWVQEFYIATYNADEPSWASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKR 182
               C +     +   +       SL +C  L+ L++    +D+  S+ LPC++I+ +  
Sbjct: 130 KRRVCHFNVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDM 189

Query: 183 VFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL 228
           V                     Y  D  L E   SGCP LE L +
Sbjct: 190 V--------------------KYDADSTL-EILISGCPVLEELTI 195

BLAST of Clc08G01080 vs. ExPASy Swiss-Prot
Match: Q1PFK0 (F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-10
Identity = 68/232 (29.31%), Postives = 94/232 (40.52%), Query Frame = 0

Query: 5   NDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIK 64
           N MD+I  LPD LL  +LSFL TK  V T +LS RWK+LW  +P L ++F          
Sbjct: 50  NLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNF---------- 109

Query: 65  NALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSF-----PSRIEEDFVT 124
                      + +  S+G    RFI   L  H + +I  LS  F      S   +D   
Sbjct: 110 -----------RHYSVSEGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYL 169

Query: 125 KVLCYEQCRWVQEFYIATYN-ADEPSW--ASLSACTLLIVLKITCR-HVDNLGSLVLPCL 184
            V        V+E  +  +N A+ P+    SL  C  +++LK+     VD    + LP L
Sbjct: 170 WVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSL 229

Query: 185 RILEIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL 228
           + L + RV                      Y D        S CP LE LV+
Sbjct: 230 KTLFLGRV---------------------TYSDANSLHRLLSNCPVLEDLVM 239

BLAST of Clc08G01080 vs. ExPASy Swiss-Prot
Match: Q56XS8 (F-box/FBD/LRR-repeat protein At1g13780 OS=Arabidopsis thaliana OX=3702 GN=At1g13780 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10
Identity = 72/271 (26.57%), Postives = 119/271 (43.91%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNAL 67
           DRI  LP+SL+  IL  L TK  V+T VLS RWK LW ++P L+ +   F  +   +  L
Sbjct: 10  DRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLDLNCRDFPFQNNNEKLL 69

Query: 68  ----DNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLC 127
               D  +QF+ +  LQ     + R  +   S    ++I++               +VL 
Sbjct: 70  IDFIDRFLQFNNESRLQKFKVDYSRDKIIKFSDRIGDAISR-------------GIRVLD 129

Query: 128 YEQCRWVQEF-YIATYNADEPSWASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKR 187
            E   + ++      Y   E    +L +C  L+ LK++   +++ G + LPCL+ + ++ 
Sbjct: 130 VESNTYYRDADDCIDYPCIEFMPLNLYSCKTLVSLKLSYSGLEDPGFVYLPCLKFMHLRE 189

Query: 188 VFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLV-LFDCILYAACICAPK 247
           V     W+                G + L E   SGCP LE L+ L D  L    + +  
Sbjct: 190 V----RWDS--------------SGTMNL-EKLVSGCPVLEELIYLHDDKLVVTRVRSRS 247

Query: 248 LEKLEL-----MALFHAFTFPEFELCTPNLK 268
           L++  +     ++LF   T   FE+  P L+
Sbjct: 250 LKRFSIPFRHKLSLFRRVT-QTFEIDAPGLE 247

BLAST of Clc08G01080 vs. ExPASy TrEMBL
Match: A0A6J1CJ42 (F-box/FBD/LRR-repeat protein At1g16930-like OS=Momordica charantia OX=3673 GN=LOC111012076 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.8e-51
Identity = 132/276 (47.83%), Postives = 166/276 (60.14%), Query Frame = 0

Query: 6   DMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKN 65
           D+DRI LLPDSLLH ILS L+TK  VQTCVLSKRW+++W  IPTLNFDF+S+        
Sbjct: 2   DVDRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSY-------- 61

Query: 66  ALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCYE 125
                 +   + + +SK  SFKRFI +V+S+H    I KLSYS P     + +T  +CY 
Sbjct: 62  ----PFEESTRNNPKSKEKSFKRFIFKVMSEH-RGYIQKLSYSSPRFHGMNVMTLSICYA 121

Query: 126 QCRWVQEFYIATYNADEPSWASLSACTLLIVLKITCRHV---DNLGSLVLPCLRILEIKR 185
           QC  V+E YI   + D   W  LSAC  L VLK++  HV    +LGSLVLPCLRIL ++ 
Sbjct: 122 QCHNVKELYITADSYDSTIWC-LSACDFLTVLKVS--HVLVYHDLGSLVLPCLRILVVES 181

Query: 186 VFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDC-ILYAACICAPK 245
           ++    ++D              YG   LNE TF GCPNLECL L +   L + CI AP 
Sbjct: 182 LWKKPGYDD---------DGGGGYGREQLNEETFLGCPNLECLTLINYGDLESTCISAPT 241

Query: 246 LEKLELMALFH-AFTFPEFELCTPNLKSVKFSNVIP 277
           LE LE+ A  H   TFP+ +LCTPNLK  KF NV+P
Sbjct: 242 LESLEIGASSHWELTFPKLKLCTPNLKRAKFENVLP 252

BLAST of Clc08G01080 vs. ExPASy TrEMBL
Match: A0A1S3CB41 (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 152/367 (41.42%), Postives = 198/367 (53.95%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNAL 67
           DRI LLPDSLLH ILS  +TK VVQTC+LSKRWKTLWT IPTLNFD+NSF        + 
Sbjct: 17  DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSF--------SS 76

Query: 68  DNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSY-SFPSRIEEDFVTKVLCYEQ 127
            +   +D +   +SK  SFK FI  VLS+H +  I KL+Y S P+  E   V  ++CY  
Sbjct: 77  SSSFNYDDE---ESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAG 136

Query: 128 CRWVQEFYIATYNADEPSW-ASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKRVFD 187
              VQ+  + TYN     W      C+ LI LK+ C  VD+ G L LP L+ILEI+    
Sbjct: 137 SHNVQQLCVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQ---- 196

Query: 188 FMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACICAPKLEKL 247
                     ++      NY G        FSGCPNLE LVL D +  +A I AP+LE  
Sbjct: 197 --------CDWSARDERANYDG-----ITMFSGCPNLESLVLVDYLFESATISAPRLENF 256

Query: 248 ELMALFH-AFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYCDFGREL 307
           +L A      TFP+ EL TP LK+V F NV+P  L+  S+   I +V I      F  + 
Sbjct: 257 KLCASHDMELTFPQVELLTPTLKAVNFVNVLPV-LESDSEFSCIQKVDIQLKDSVFTTDG 316

Query: 308 CLLQQRVVKNICELLKVFHDVVSLILPPNTTQAIFKAPSLRRLSFQNLRYLKEFKAKRTE 367
              Q+   K I +LL V H+  S  LP   TQ I    S + LSF N+R+L+  K K ++
Sbjct: 317 SQTQELKSKFI-DLLSVLHNASSFTLPMKATQVI---SSYKELSFHNMRHLR-LKTKESD 349

Query: 368 ETIEILV 372
             ++ L+
Sbjct: 377 LLLKHLL 349

BLAST of Clc08G01080 vs. ExPASy TrEMBL
Match: A0A6J1CJ18 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordica charantia OX=3673 GN=LOC111012046 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-50
Identity = 138/302 (45.70%), Postives = 179/302 (59.27%), Query Frame = 0

Query: 3   KNNDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGK 62
           K   +DRI LLPDSLLH ILS L+T+QVVQTCVLSKRWKTLWT IPTLNFDF+S+  +  
Sbjct: 7   KKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQS 66

Query: 63  IKNALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKV- 122
           I+N+  +            K  SF+RFIL VLS+H   +I  L++S  SR  +D V+ + 
Sbjct: 67  IRNSSAS----------NPKEPSFERFILRVLSEHGCKNIITLNFSC-SRDSDDTVSLIE 126

Query: 123 --LCYEQCRWVQEFYIATYNADEPSW-ASLSACTLLIVLKITCRHVDNLGSLVLPCLRIL 182
             +CY     VQE  I+TY     +W   LS C+ L+VLKI C  VD+ G+L    LRIL
Sbjct: 127 WLICYAS-HVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRIL 186

Query: 183 EIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACIC 242
           EI+       W D          Y+  Y +I +    FSGCPNLE LVL + +  +A I 
Sbjct: 187 EIE-----CDWGD---------RYDRKYNEIEM----FSGCPNLESLVLVNYLFDSATIS 246

Query: 243 APKLEKLELMALFHAFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYC 301
           APKLE LEL A     + P+ EL  P+LK++KF NV+P  LK  S    IH+V+I  + C
Sbjct: 247 APKLENLELCA-----SXPQVELFAPSLKTLKFGNVLP-TLKSASKFACIHKVNIQVEDC 272

BLAST of Clc08G01080 vs. ExPASy TrEMBL
Match: A0A5A7TCF1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00570 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-47
Identity = 141/334 (42.22%), Postives = 179/334 (53.59%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNAL 67
           DRI LLPD+LLH ILS  +TK VVQTC+LSKRWKTLWT IPTLNFD+NSF        + 
Sbjct: 17  DRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSF--------SS 76

Query: 68  DNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSY-SFPSRIEEDFVTKVLCYEQ 127
            +   +D +   +SK  SFK FI  VLS+H +  I KL+Y S P+  E   V  ++CY  
Sbjct: 77  SSSFNYDDE---ESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVLVELLICYAG 136

Query: 128 CRWVQEFYIATYNADEPSW-ASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKRVFD 187
              VQ+  I TYN     W      C+ LI LK+ C  VD+ G L LP L+ILEI+    
Sbjct: 137 SHNVQQLCINTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQ---- 196

Query: 188 FMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACICAPKLEKL 247
                     ++      NY G        FSGCPNLE LVL D +  +A I AP+LE  
Sbjct: 197 --------CDWSARDERANYDG-----ITMFSGCPNLESLVLVDYLFESATISAPRLENF 256

Query: 248 ELMALFH-AFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFDYCDFGREL 307
           +L A      TFP+ EL TP LK+V F NV+P  L+  S+   I +V I      F  + 
Sbjct: 257 KLCASHDMELTFPQVELLTPTLKAVNFVNVLPV-LESDSEFSCIQKVDIQLKDSVFTTDG 316

Query: 308 CLLQQRVVKNICELLKVFHDVVSLILPPNTTQAI 339
              Q+   K I +LL V H+  S  LP   TQ +
Sbjct: 317 SQTQELKSKFI-DLLSVLHNASSFTLPMKATQEV 320

BLAST of Clc08G01080 vs. ExPASy TrEMBL
Match: A0A6J1CKA9 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica charantia OX=3673 GN=LOC111012077 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-44
Identity = 138/340 (40.59%), Postives = 181/340 (53.24%), Query Frame = 0

Query: 1   MSKNNDM-DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLD 60
           MSK   + DRI LLPD LL  ILS ++TKQVVQTCVLSKRWKTLWT IPTLNF+F S+  
Sbjct: 110 MSKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPF 169

Query: 61  RGKIKNALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVT 120
                NA             +SK +SFK FI  +LS+     I KLSY+     +E  + 
Sbjct: 170 EEPSLNA------------CRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLV 229

Query: 121 KVL-CYEQCRWVQEFYIATYNADEPSWA-SLSACTLLIVLKITCRHVDNLGSLVLPCLRI 180
           ++L C+ +   V+E Y+ TY      W   LSAC+ L VLK+ C  V + G L LP LRI
Sbjct: 230 ELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRI 289

Query: 181 LEIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLFDCILYAACI 240
           LEI+               +C +   +Y G        FSGCPNL+ LVL + +  +A I
Sbjct: 290 LEIE-------------XEDC-EDDADYKG-----IRMFSGCPNLKSLVLINYLFESATI 349

Query: 241 CAPKLEKLELMALFHAFTFPEFEL-CTPNLKSVKFSNVIPCELKCCSDIVNIHQVSIAFD 300
           CAPKLE L L +  +   F E EL CT +L++V FSN++P  +    +   I +V+I   
Sbjct: 350 CAPKLENLVLCS-GNELVFSEVELTCTSSLRNVTFSNMLP-TVNSALEFSCIQKVNIEVH 409

Query: 301 YCDFGRELCLLQQRVVKNICELLKVFHDVVSLILPPNTTQ 337
              F        Q  +    EL +VFH+  S ILP   TQ
Sbjct: 410 NYQFSSGNGYFCQNKIAAFSELFRVFHNARSFILPLTPTQ 416

BLAST of Clc08G01080 vs. TAIR 10
Match: AT5G56820.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 76.3 bits (186), Expect = 6.0e-14
Identity = 81/293 (27.65%), Postives = 125/293 (42.66%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIKNAL 67
           DRI  LPD LL  ILSF+ T   + T +LSKRWK +W  +PTL+ D +S  + G ++   
Sbjct: 15  DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLDEDSCRNIGTLR--F 74

Query: 68  DNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVLCYEQC 127
           D G    +K H     TS     L +     S+ I +L  +    + E  +T    Y   
Sbjct: 75  DEGCCMFLKSHEAPVLTS-----LNLKLMTPSHDIDRLLSNIKPILHEITITSYR-YSTI 134

Query: 128 RWVQEFYIATYNADEPSWASLSACTLLIVLKITCR-HVDNLGSLVLPCLRILEIKRVFDF 187
           R+ +               +L+ C  L+V+K+  +  VD    +    L+ L + RV   
Sbjct: 135 RFPR---------------NLNVCQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRV--- 194

Query: 188 MYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVLF------DCILYAACICAP 247
                    Y+C +S+              S CP LE L LF      DC L +  I  P
Sbjct: 195 --------KYSCRESFT----------TLLSACPVLEDLDLFIGRVHYDC-LNSFTIWVP 254

Query: 248 KLEKLELMALFHAFTFPEFELCTPNLKSVKFSNVIPCELKCCSDIVNIHQVSI 294
            L++L +    + F    FE+  P+LK +K +    C  K   D+ N+ +  +
Sbjct: 255 SLQRLSICDESYRFRSTTFEISVPSLKYLKIACQDSC-FKFVEDMPNLVEAHV 261

BLAST of Clc08G01080 vs. TAIR 10
Match: AT3G59160.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 3.0e-13
Identity = 79/292 (27.05%), Postives = 125/292 (42.81%), Query Frame = 0

Query: 8   DRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGK-IKNA 67
           D I  LPD+LL  +LS+L TK+   T +LS+RW+ L   +P L FD +++L R K +KN 
Sbjct: 13  DMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNP 72

Query: 68  LDN----GIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSF---PSRIEEDFVT 127
           L      G    V    +   TSF  F+  +L    ++ + K S         ++ D V 
Sbjct: 73  LHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNSPLDKFSLKMVDDHDPVDPDCVA 132

Query: 128 KVLCYEQCRWVQEFYIATYNADEPSWASLSACTLL--IVLKITCRHVD----NLGSLVLP 187
             +     R V + ++     D   W SL A   L   ++K+T +  D    ++  + LP
Sbjct: 133 PWIHKVLVRGVSDLHLV---IDMNEWTSLPAKIFLTETLVKLTLKIRDGPPIDVKHVHLP 192

Query: 188 CLRILEIKRV-FDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL---FD 247
            L+ L ++ V FD                      DIG ++   SGCP LE LVL   + 
Sbjct: 193 KLKTLHLESVMFD--------------------EEDIGFSK-LLSGCPELEELVLHHIWS 252

Query: 248 CILYAACICAPKLEKLEL------MALFHAFTFPEFELCTPNLKSVKFSNVI 276
           C+  +  +    L++L            H          TPNL  ++++ VI
Sbjct: 253 CVWTSCSVSVATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVI 280

BLAST of Clc08G01080 vs. TAIR 10
Match: AT1G16930.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 72.8 bits (177), Expect = 6.7e-13
Identity = 63/225 (28.00%), Postives = 102/225 (45.33%), Query Frame = 0

Query: 3   KNNDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGK 62
           K  + DRI  LPDSLL  ILS L TK+ V T VLSKRW+ LW H+P L+ D N+F D   
Sbjct: 10  KQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDV 69

Query: 63  IKNALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSFPSRIEEDFVTKVL 122
             + ++  +  + + HL+     FK  ++  +++H ++              + ++  V+
Sbjct: 70  FVSFVNRFLGSENEQHLE----RFK--LIYEVNEHDASRF------------KSWINAVI 129

Query: 123 CYEQCRWVQEFYIATYNADEPSWASLSACTLLIVLKITCRHVDNLGSLVLPCLRILEIKR 182
               C +     +   +       SL +C  L+ L++    +D+  S+ LPC++I+ +  
Sbjct: 130 KRRVCHFNVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDM 189

Query: 183 VFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL 228
           V                     Y  D  L E   SGCP LE L +
Sbjct: 190 V--------------------KYDADSTL-EILISGCPVLEELTI 195

BLAST of Clc08G01080 vs. TAIR 10
Match: AT1G55660.1 (FBD, F-box and Leucine Rich Repeat domains containing protein )

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-12
Identity = 68/232 (29.31%), Postives = 94/232 (40.52%), Query Frame = 0

Query: 5   NDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIK 64
           N MD+I  LPD LL  +LSFL TK  V T +LS RWK+LW  +P L ++F          
Sbjct: 50  NLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNF---------- 109

Query: 65  NALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSF-----PSRIEEDFVT 124
                      + +  S+G    RFI   L  H + +I  LS  F      S   +D   
Sbjct: 110 -----------RHYSVSEGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYL 169

Query: 125 KVLCYEQCRWVQEFYIATYN-ADEPSW--ASLSACTLLIVLKITCR-HVDNLGSLVLPCL 184
            V        V+E  +  +N A+ P+    SL  C  +++LK+     VD    + LP L
Sbjct: 170 WVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSL 229

Query: 185 RILEIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL 228
           + L + RV                      Y D        S CP LE LV+
Sbjct: 230 KTLFLGRV---------------------TYSDANSLHRLLSNCPVLEDLVM 239

BLAST of Clc08G01080 vs. TAIR 10
Match: AT1G55660.2 (FBD, F-box and Leucine Rich Repeat domains containing protein )

HSP 1 Score: 68.9 bits (167), Expect = 9.6e-12
Identity = 68/232 (29.31%), Postives = 94/232 (40.52%), Query Frame = 0

Query: 5   NDMDRIRLLPDSLLHDILSFLDTKQVVQTCVLSKRWKTLWTHIPTLNFDFNSFLDRGKIK 64
           N MD+I  LPD LL  +LSFL TK  V T +LS RWK+LW  +P L ++F          
Sbjct: 50  NLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNF---------- 109

Query: 65  NALDNGIQFDVKGHLQSKGTSFKRFILEVLSQHSSNSITKLSYSF-----PSRIEEDFVT 124
                      + +  S+G    RFI   L  H + +I  LS  F      S   +D   
Sbjct: 110 -----------RHYSVSEGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYL 169

Query: 125 KVLCYEQCRWVQEFYIATYN-ADEPSW--ASLSACTLLIVLKITCR-HVDNLGSLVLPCL 184
            V        V+E  +  +N A+ P+    SL  C  +++LK+     VD    + LP L
Sbjct: 170 WVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSL 229

Query: 185 RILEIKRVFDFMYWNDYFLPYNCMQSYNNYYGDIGLNENTFSGCPNLECLVL 228
           + L + RV                      Y D        S CP LE LV+
Sbjct: 230 KTLFLGRV---------------------TYSDANSLHRLLSNCPVLEDLVM 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890212.12.5e-7054.95F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida][more]
XP_038890213.11.1e-5246.10uncharacterized protein LOC120079853 [Benincasa hispida][more]
XP_022141790.19.9e-5147.83F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia][more]
XP_008459617.12.9e-5041.42PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo][more]
XP_022141765.13.7e-5045.70LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [M... [more]
Match NameE-valueIdentityDescription
Q9FJT18.5e-1327.65Putative FBD-associated F-box protein At5g56820 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LX554.2e-1227.05Putative F-box/LRR-repeat protein At3g59160 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Q9FZ529.4e-1228.00F-box/FBD/LRR-repeat protein At1g16930 OS=Arabidopsis thaliana OX=3702 GN=At1g16... [more]
Q1PFK01.4e-1029.31F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 ... [more]
Q56XS82.3e-1026.57F-box/FBD/LRR-repeat protein At1g13780 OS=Arabidopsis thaliana OX=3702 GN=At1g13... [more]
Match NameE-valueIdentityDescription
A0A6J1CJ424.8e-5147.83F-box/FBD/LRR-repeat protein At1g16930-like OS=Momordica charantia OX=3673 GN=LO... [more]
A0A1S3CB411.4e-5041.42F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A6J1CJ181.8e-5045.70LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordic... [more]
A0A5A7TCF11.9e-4742.22F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1CKA91.9e-4440.59LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica ch... [more]
Match NameE-valueIdentityDescription
AT5G56820.16.0e-1427.65F-box/RNI-like/FBD-like domains-containing protein [more]
AT3G59160.13.0e-1327.05F-box/RNI-like superfamily protein [more]
AT1G16930.16.7e-1328.00F-box/RNI-like/FBD-like domains-containing protein [more]
AT1G55660.19.6e-1229.31FBD, F-box and Leucine Rich Repeat domains containing protein [more]
AT1G55660.29.6e-1229.31FBD, F-box and Leucine Rich Repeat domains containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 13..53
e-value: 8.5E-4
score: 28.6
IPR001810F-box domainPFAMPF00646F-boxcoord: 12..47
e-value: 8.6E-6
score: 25.5
IPR001810F-box domainPROSITEPS50181FBOXcoord: 7..57
score: 9.815402
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..50
e-value: 1.9E-7
score: 32.9
NoneNo IPR availablePANTHERPTHR34223:SF51OS11G0201299 PROTEINcoord: 3..356
NoneNo IPR availablePANTHERPTHR34223OS11G0201299 PROTEINcoord: 3..356
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 43..352
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 4..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc08G01080.2Clc08G01080.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding