Clc08G00600 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G00600
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ATP synthase subunit alpha
Location	ClcChr08: 1068854 .. 1069415 (+)
RNA-Seq Expression	Clc08G00600
Synteny	Clc08G00600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTGGCTACCCTGAGGTACTATCTTATTATGAGGTAGTATATTATTATGCGCAGTATCTCATTGAACAACCACTGTGGTCGACGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACGTGTCAAAGTGAAAGCCCCTGGGATTATTGAACGTAAATCAGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTGTAGGCCGTGGCCAACGAGAACTTATAATCAGAAACCGACAAACTGGAAAAATAGCTATAACTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGACAGAAACGCTCAACTGTGGCAAAATTAGTTCAAATTCTTTCAGAAGGGAATGCTTTGGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCTGCTCCTCTTCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTCTAG

mRNA sequence

ATGTGGGTGGCTACCCTGAGGTACTATCTTATTATGAGCGATCACGAGCGAAGACGTGTCAAAGTGAAAGCCCCTGGGATTATTGAACGTAAATCAGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTGTAGGCCGTGGCCAACGAGAACTTATAATCAGAAACCGACAAACTGGAAAAATAGCTATAACTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGACAGAAACGCTCAACTGTGGCAAAATTAGTTCAAATTCTTTCAGAAGGGAATGCTTTGGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCTGCTCCTCTTCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTCTAG

Coding sequence (CDS)

ATGTGGGTGGCTACCCTGAGGTACTATCTTATTATGAGCGATCACGAGCGAAGACGTGTCAAAGTGAAAGCCCCTGGGATTATTGAACGTAAATCAGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTGTAGGCCGTGGCCAACGAGAACTTATAATCAGAAACCGACAAACTGGAAAAATAGCTATAACTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGACAGAAACGCTCAACTGTGGCAAAATTAGTTCAAATTCTTTCAGAAGGGAATGCTTTGGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCTGCTCCTCTTCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTCTAG

Protein sequence

MWVATLRYYLIMSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHAF

Homology

[Close]

BLAST of Clc08G00600 vs. NCBI nr
Match: YP_009913606.1 (ATPase subunit 1 [Luffa acutangula] >YP_009913634.1 ATPase subunit 1 [Luffa acutangula] >QLJ92999.1 ATPase subunit 1 [Luffa acutangula] >QLJ93000.1 ATPase subunit 1 [Luffa acutangula])

HSP 1 Score: 270.8 bits (691), Expect = 7.5e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. NCBI nr
Match: ABD61049.1 (ATPase alpha subunit, partial [Eucommia ulmoides])

HSP 1 Score: 270.8 bits (691), Expect = 7.5e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 98  LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 157

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 158 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 217

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 218 APLQFLAPYSGCAMGEYFRDNGMHA 242

[Close]

BLAST of Clc08G00600 vs. NCBI nr
Match: ADL63198.1 (Atp1, partial [Dipentodon sinicus])

HSP 1 Score: 270.8 bits (691), Expect = 7.5e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 73  LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 132

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 133 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 192

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 193 APLQFLAPYSGCAMGEYFRDNGMHA 217

[Close]

BLAST of Clc08G00600 vs. NCBI nr
Match: YP_003587244.1 (ATPase subunit 1 [Citrullus lanatus] >ACV96623.1 ATPase subunit 1 [Citrullus lanatus])

HSP 1 Score: 270.8 bits (691), Expect = 7.5e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. NCBI nr
Match: ABY66740.1 (atp1, partial [Eucommia ulmoides])

HSP 1 Score: 270.8 bits (691), Expect = 7.5e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 87  LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 146

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 147 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 206

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 207 APLQFLAPYSGCAMGEYFRDNGMHA 231

[Close]

BLAST of Clc08G00600 vs. ExPASy Swiss-Prot
Match: P05493 (ATP synthase subunit alpha, mitochondrial OS=Pisum sativum OX=3888 GN=ATPA PE=3 SV=2)

HSP 1 Score: 268.5 bits (685), Expect = 4.9e-71
Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSE NALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy Swiss-Prot
Match: P24459 (ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.9e-71
Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSE NALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy Swiss-Prot
Match: Q01915 (ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.9e-71
Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSE NALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy Swiss-Prot
Match: P05492 (ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis OX=3942 GN=ATPA PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 8.3e-71
Identity = 135/145 (93.10%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           + DHERRRV+VK PGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LGDHERRRVEVKVPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy Swiss-Prot
Match: P05495 (ATP synthase subunit alpha, mitochondrial OS=Nicotiana plumbaginifolia OX=4092 GN=ATPA PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-70
Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQ+NSRATSESETLYCVYVAIGQKRSTVA+LVQILSE NALEYSILVAATASDP
Sbjct: 183 DTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy TrEMBL
Match: A0A7D5Y002 (ATP synthase subunit alpha OS=Luffa acutangula OX=56866 GN=atp1-1 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy TrEMBL
Match: D5I3B4 (ATP synthase subunit alpha OS=Citrullus lanatus OX=3654 GN=atp1 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 123 LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

[Close]

BLAST of Clc08G00600 vs. ExPASy TrEMBL
Match: A1XIU0 (ATP synthase subunit alpha (Fragment) OS=Eucommia ulmoides OX=4392 GN=atp1 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 98  LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 157

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 158 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 217

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 218 APLQFLAPYSGCAMGEYFRDNGMHA 242

[Close]

BLAST of Clc08G00600 vs. ExPASy TrEMBL
Match: B0FA11 (ATP synthase subunit alpha (Fragment) OS=Eucommia ulmoides OX=4392 GN=atp1 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 87  LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 146

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 147 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 206

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 207 APLQFLAPYSGCAMGEYFRDNGMHA 231

[Close]

BLAST of Clc08G00600 vs. ExPASy TrEMBL
Match: E5DK80 (ATP synthase subunit alpha (Fragment) OS=Dipentodon sinicus OX=179843 GN=atp1 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.6e-69
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHERRRV+VKAPGIIERKSVHEPMQTGLKAVDSLVP+GRGQRELII +RQTGK AI I
Sbjct: 73  LSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 132

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVA+LVQILSEGNALEYSILVAATASDP
Sbjct: 133 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 192

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 193 APLQFLAPYSGCAMGEYFRDNGMHA 217

[Close]

BLAST of Clc08G00600 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-68
Identity = 126/145 (86.90%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHE+RRV+VKAPGI+ERKSVHEPMQTGLKAVDSLVP+GRGQREL+I +RQTGK  I I
Sbjct: 393 LSDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAI 452

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQ+NSRATSESET+YCVYVAIGQKRSTV +L+Q L E NALEYSILVAATASDP
Sbjct: 453 DTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDP 512

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 513 APLQFLAPYSGCAMGEYFRDNGMHA 537

[Close]

BLAST of Clc08G00600 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 255.8 bits (652), Expect = 2.3e-68
Identity = 126/145 (86.90%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +SDHE+RRV+VKAPGI+ERKSVHEPMQTGLKAVDSLVP+GRGQREL+I  RQTGK  I I
Sbjct: 123 LSDHEQRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGKTTIAI 182

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQKQ+NSRATSESET+YCVYVAIGQKRSTV +L+Q L E NALEYSILVAATASDP
Sbjct: 183 DTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDP 242

Query: 132 APLQFLAPYSGCAMGEYFRDNGMHA 157
           APLQFLAPYSGCAMGEYFRDNGMHA
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHA 267

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BLAST of Clc08G00600 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 154.1 bits (388), Expect = 9.5e-38
Identity = 80/144 (55.56%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 12  MSDHERRRVKVKAPGIIERKSVHEPMQTGLKAVDSLVPVGRGQRELIIRNRQTGKIAITI 71
           +S  E R ++  APGII R+SV+EP+QTGL A+DS++P+GRGQRELII +RQTGK A+  
Sbjct: 122 ISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 72  DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAKLVQILSEGNALEYSILVAATASDP 131
           DTILNQ+  N         + CVYVAIGQK S+VA++V  L E  A+EY+I+VA TA  P
Sbjct: 182 DTILNQQGQN---------VICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSP 241

Query: 132 APLQFLAPYSGCAMGEYFRDNGMH 156
           A LQ+LAPY+G A+ EYF     H
Sbjct: 242 ATLQYLAPYTGAALAEYFMYREQH 256

The following BLAST results are available for this feature:

BLAST of Clc08G00600 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009913606.1	7.5e-69	94.48	ATPase subunit 1 [Luffa acutangula] >YP_009913634.1 ATPase subunit 1 [Luffa acut...	[more]
ABD61049.1	7.5e-69	94.48	ATPase alpha subunit, partial [Eucommia ulmoides]	[more]
ADL63198.1	7.5e-69	94.48	Atp1, partial [Dipentodon sinicus]	[more]
YP_003587244.1	7.5e-69	94.48	ATPase subunit 1 [Citrullus lanatus] >ACV96623.1 ATPase subunit 1 [Citrullus lan...	[more]
ABY66740.1	7.5e-69	94.48	atp1, partial [Eucommia ulmoides]	[more]

BLAST of Clc08G00600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05493	4.9e-71	93.79	ATP synthase subunit alpha, mitochondrial OS=Pisum sativum OX=3888 GN=ATPA PE=3 ...	[more]
P24459	4.9e-71	93.79	ATP synthase subunit alpha, mitochondrial OS=Phaseolus vulgaris OX=3885 GN=ATPA ...	[more]
Q01915	4.9e-71	93.79	ATP synthase subunit alpha, mitochondrial OS=Glycine max OX=3847 GN=ATPA PE=3 SV...	[more]
P05492	8.3e-71	93.10	ATP synthase subunit alpha, mitochondrial OS=Oenothera biennis OX=3942 GN=ATPA P...	[more]
P05495	1.1e-70	93.10	ATP synthase subunit alpha, mitochondrial OS=Nicotiana plumbaginifolia OX=4092 G...	[more]

BLAST of Clc08G00600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D5Y002	3.6e-69	94.48	ATP synthase subunit alpha OS=Luffa acutangula OX=56866 GN=atp1-1 PE=3 SV=1	[more]
D5I3B4	3.6e-69	94.48	ATP synthase subunit alpha OS=Citrullus lanatus OX=3654 GN=atp1 PE=3 SV=1	[more]
A1XIU0	3.6e-69	94.48	ATP synthase subunit alpha (Fragment) OS=Eucommia ulmoides OX=4392 GN=atp1 PE=3 ...	[more]
B0FA11	3.6e-69	94.48	ATP synthase subunit alpha (Fragment) OS=Eucommia ulmoides OX=4392 GN=atp1 PE=3 ...	[more]
E5DK80	3.6e-69	94.48	ATP synthase subunit alpha (Fragment) OS=Dipentodon sinicus OX=179843 GN=atp1 PE...	[more]

BLAST of Clc08G00600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07698.1	1.8e-68	86.90	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	2.3e-68	86.90	ATP synthase subunit 1	[more]
ATCG00120.1	9.5e-38	55.56	ATP synthase subunit alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 40..156 e-value: 2.4E-26 score: 92.7
None	No IPR available	GENE3D	3.40.50.12240		coord: 11..157 e-value: 8.9E-52 score: 178.2
None	No IPR available	PANTHER	PTHR48082:SF2	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 12..156
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 12..156
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G00600.2	Clc08G00600.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0031090	organelle membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism