Clc07G17090 (gene) Watermelon (cordophanus) v2

Overview
NameClc07G17090
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionlate embryogenesis abundant protein At5g17165-like
LocationClcChr07: 31570007 .. 31575486 (-)
RNA-Seq ExpressionClc07G17090
SyntenyClc07G17090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGAACAGCGATCCACTTCGCAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGTTCGTCTTCTTTTTCTTCTTTTTCTTCGATTTCCTTTTATGCGAATGCTCATGAAGTTATGATGCTGTTACTTTGTTTTGTTCTGTTATTCTCTGGTAGATAGCTTTATTGCATTCTTGTTGCGAAAGTTTCTCTGAAAAGTCGTTCTGAATGCTGTTGCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACGCTGATTGCCTTTTTTGAACTACTTCACACTGACGCACACTTAAGATGAACGTCTTCACGAAGTAACTTTTAGCTCCTCTCTACTTTCGCTCTATTCTAATCGTCTGATCACGTACTGATATTCAGTTCCTTCTGATTTTGGCCGTTTCTTCAACAAAAAAAGGTTTTAGGATTCTAATTCGCCGTCGATTTTCCCGCCATATGCAATATTACGCCTAACTCGCTTAGAAAATTGGAAATTATGATTGCCTTCATTCTATGCCTTTTTCCCCTCTTCCTCGTTGTTTTTGGTTCAATTTTGTGGGACTATTTTGTTTTGTTTATGTTGTGTATTAGTCGATACTGCCTGCATCTTGAAGAAGACTCGGAATTAGAGTGTTATTCTTATTTCTTAATCCATTGAATCTTTGATGACATTTGGGGAAGAGGCGCAGGCCAGAAAATCTGTTCTACGAAAATTAGTCTGTAGCCATTATTTCATTAAAAATCGGAAGTCGTGAATATAAAAATTAAAAAACTAACTATAATAAATAACTCATTCATTATAAGATTTATTTATTATTATTATTTTTAATTAATTTGTTGTACCTAATTTTAAATTATCAGTTTATATATTGTTTTCAAAAGAAGAAAAAATATGTTTCTAAAAAAAAAAAAAGAAAAAAGAAATAATATGTGAATATTATGAACTGTTTTATGTTTTATTTGTTTTCTTTGAGAACATATATTGTTACTTGGGATTACTTTAAGAAATTAGCTAACTTACTAATTTGCTACTATATATCTATGTTAAAATAATCCATGAAAAATCAAATAGAGTCATTTTACACTTTATAAATATGTTCTTTCGGAAAGAAAACAATATATATATTGATTAGTTGTCAAAATATAAATAAATATTTGTTGACTTCTAGTCGTGAAAACTATTTTTTTCTACGTCTCCTAGACTAGATTTATTCAGATTTTAGATTGGAGAAAAACCAACTACTAAATCATCATAAAGAGCTGTTTCTTATCCATGATCTTCAATAAATGTTTTTAAATAATTCCTCGAGTAAAAAGTTCACAAAAAATTTGGATGGAGATTAGATTTCAAGGAGTGTGGTCTTTGAATTTGAATTTTCTTTTTAATTATTGTCACACTATCCAATTTTAAAGAATTAATGTTATTTTGGAAAAATAACAAAATTCCTAACTTTTCTTAACTAAGCCAAGTTAGATTAAAGAAATATAAAAAGTTTAAATAATGGAAAACTGTTCCTCTATCATCAATTTCAATTGAAAGTAAAGCAAATAATCATGTTGAAAGAATTTAGAAGTCCATGTATGAAAGGAATTTATTTTTTAAAAAGGGGTAACATTCTTGGTTACATATAAAAGGAAAACATTGAAGGGCATGATTCTTTAATTATACTTTTGTGGCAAACCATGAATATGTAATATGCTAGTAGAAATTTTTGGTGTTTAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAAAAAAAAAACTGAAATCAAACTCCCTATTCTATAGCCCAGAGATAGAGTGATCGGTCCACAATTAAAGCTGAGGGTTTGTGATATGAATTGGCGGATGTTCATCCGCTCGTTTCAGCTGACATTTTGATTTCGTACTTTTTTTATTTTCTGTCTGTCTTAGTCCGACTCGCTCCCACTTTAAGCAGTGGAGTGGGACGGAATGGCTTCAGTAATAAATAGAATTGAATTGAATACGGAGAGTTTGGTGAGGATATGAGTAGTAGCGATTTTCCTTCTCCATCTTATCCTACATGTCGTTTTAAAATCCACATTTACTCAAAATTAAGGACGATTTTTTTTTCTTATTACTTATTACTAACACTATAAACTAATACAAGGTTTTAATATATAAATACGTTTATGAAAATGTTGATGTTGATATTTTTTTTAAAATATATATAAATATTAGATTATGAAATTAATAAATAAATATGTTATCATTTTAAAATTGTTTTAAATTTTGTTTTATTAGTTACAATTTTACGTTGTCGTTATTTTATTGATATTTTTTGTTATAATCATATAATTAAAATGAAGGTTTTCAAAAATAGAAAAACAATTAAAAATTATTATAAATATAGCAGAATTGTACCTTCTATTTAGGTCTATCGCATCCTATCACATATGTAGAAAATGCTGCTATATTTATAAATATTTTGATATTTTTTCTATTTTTCTAATTAAAATCTCCTATTGCTTTTAATGTACGTCCAATGGATATGTACATAAATTTTTATGACCAAACAACTACTACCTTCTAGTCAATGTCAGTATTTTTAACTAAAATATATTATAATATATATGTTCTTTCTTGTTAAGCTTGATATGTTTTGTGGGTTTGGTAATGATTTAGGGTACATTTAGTAATTTTTTTTTTTTTTTACTTTTAGTTTTTGAAAATTAAGTCTATTTACTTCACATTACTTACAATAATTTGTATCTTTCTTAAGTACGATGGTTGGCTTGATTTTTTAAATCATTAGTAAAAACTAGACAACAAATAAAAAAATTTAGAGGTGAAAATAGTGTGTTTATATGCTTAATTTTATAAAACAAAAACAAAAACTGAAATTTTACCAACTTGACCTTAATTTTTTTGGTTAGTTTTAAAAATTAAATCTATGAAAAATTCTTTTCACCCTAAAATCTTCTATGTATTATTTAATTTTTATCAATATTTTCAAAGTGAACATTTGAAAACTAAACAAAAATTTGTTTGTCACATCTTATGCCTTCGACATCTCAACGTGGAACACGTGTAAAATCAAATTTGTTTTTATCCGATGACCTAGCTGGCTCTTATCTTATTTTTCCCATAAGATCAGCTTGTTCATCGCCAAATACTTGGAATAGGAAACTGGTCCCTAAATATTGTACGGTTGTACCATCATTCTAGTAACGTTAAAATATTATTTTCATCTTCATATTTAAAATTTAATAAATTTTAGTTTATATATTTTAGATACTTAATTTTAATTTATGTTCAATAAATTTTAATTTAATCTATTAAAGTTAAATTGTTTTGAAATTAACTAAAAAAATTCTAATTACTTTTTAGAAAGGAAAGAAATGTGATGTGTGAATATATTTTGTAAAAAAGTTAATGGATAAAAAATAATAATAATAATAATAATGAAAATCATCAATAAACTAGCATAAGTTTATTGAAAGTTTAGAAACTAAAATTAGATATTTAAAAATATATAAACTAATTTCTACAAGTATAATATTTTACTTTTTCTATCACTAAAATTTAGATTGTCACAATATGACTCTTTGGATTAATTATCAAATTATGATTCTAAAATCTAATGCCTTTTAATGTCTGTCACATATAAATTTAAAGTGATCTTGCAGGTTATATTATATTTTATTTTATTTTATTTTATAATTATTATTATTTTTGCATAGTGGTACAAAACTGTCAACCAAATTTTGTCATCTTTTGAAATAATTTCTCTCACGACATGACCCTCCTGTGTTGACTATTAAATATTGATTTTAGAATCTAATAATATGTATCAAATATAAATGAGGGAGGTTTTCAAATACAGCAAAATTATCAAACTACTTACAAATGTAGAAAAATTTTATTAAAATTTTTTATATTTATAAGTAACTATTTATTTATTTATTTTTTACTTATAATAATTTTCTTATAAATTAAAGGTATTTTCACTTTGATGTCCTCGAATAATTTGTCTTTTGTATCTTTCTTTCAAAATATCAATTTCATTGCTTTGAGCCTTGGATAATGAGCATGATTCCCTTTCACGTTAGCTTTGTTTGATAAATTGCGCTTTGGATCTTATCATCTCTATACGACCTTTATTTGGGTCAAGTGGGAAGGGATGGTATGATGTTTGTCTGGAATTATTGCCTCTGATCGTTACTATTCTTGGCTTCTTCTGCAAGTTATGCATTATTATAATGTCAATAATTTTCAATCAAAATCTTCATTTGGTACTCGAAAATACCATTTTCTTTTAGCTCTTTTTTTAGTACTATTTTCTTTAGAGTTTATGTTCATTTGATTTTAATTATTTATCATCCACTATTAGATTAGAGAAGTATATTAATCTTATCGGATTCAAAAGTTCAAAAGAAACTAATGTGTTCTTTTTTAAAACAAATAGTTGTCAGAGCAGGTAAGATTAGATTTTTACCATTTAAATAACATTAGCTTTAGCCGATTGGATTTCACATCGTCATTTCTTTGTTTTCCTTTAATTGAATTATTAAATAAGTATTTGATCGAAACCTTTTCTTTCATGATTATAAAAGTGATTTTTTTGAACCCAAAAAAAAAAAAAAAAAAAATTGAAAAATTTGTCACTTGAGTGAGCTCAATTGTTTAACACAAAGATCACATAAAAAAATATGTAATGTAGATATTAGAAAGTTGAATTATAAGTAGAATGAAAAGCAGCATGTGGTGCGTGGGACTGTGTTCTTATCATTTATGTTAGTTGTTCTTACAAGTCAATCATAAACTTTATTTTATTTTTTATTTTTTTTTATCTCGATGGCTTGTCTCAAGAATGCTGTTAGGTTCGTCCTTTTATTCTTCACATAACTTTTTCCCCATATCGTAGTCCATCTATGGAGTGGGTTTAAACCACGTTAATTATGGGAAAATAAATATGTTTGGTCCTACGTTTTTAATATAATTTTTATTTGGTTCTAGATAGTTTGCTCTCACATCTGAATTTTAAATTTGATTCATAAGTTTTAAAATCTACCTTTTATCATTGAATTTTGAGTTTAGTTTTAAATTTGCTTCATATGTTTAATGGTTTTACACTTTCGCCCTTGAAACAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCTGGACGAGCAAGTTCGACCAAGTGTAGTCCCAGATGATGTGATTCAGGCTCAAGCTGCAGATAAATACTGGGCTCCTCATCCACAAACCGGGGTTTTTGGGCCAGCCACTGAGAACCCTGCTGCAGACGCGGGCAACCGTGCAGCAGATGGTGGCCATTACTCTGGTGTGGAGGAGGAAAAGGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTGTAG

mRNA sequence

ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGAACAGCGATCCACTTCGCAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCTGGACGAGCAAGTTCGACCAAGTGTAGTCCCAGATGATGTGATTCAGGCTCAAGCTGCAGATAAATACTGGGCTCCTCATCCACAAACCGGGGTTTTTGGGCCAGCCACTGAGAACCCTGCTGCAGACGCGGGCAACCGTGCAGCAGATGGTGGCCATTACTCTGGTGTGGAGGAGGAAAAGGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTGTAG

Coding sequence (CDS)

ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGAACAGCGATCCACTTCGCAACTCTGTGATCTCTTCCTCTGCTCCGAAGTTCAGGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCTGGACGAGCAAGTTCGACCAAGTGTAGTCCCAGATGATGTGATTCAGGCTCAAGCTGCAGATAAATACTGGGCTCCTCATCCACAAACCGGGGTTTTTGGGCCAGCCACTGAGAACCCTGCTGCAGACGCGGGCAACCGTGCAGCAGATGGTGGCCATTACTCTGGTGTGGAGGAGGAAAAGGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTGTAG

Protein sequence

MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTSLEDSEKPHGL
Homology
[Close]
BLAST of Clc07G17090 vs. NCBI nr
Match: XP_038901450.1 (late embryogenesis abundant protein At5g17165-like [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60
Identity = 118/130 (90.77%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAG IAGLGKRITDQIW SDPLRNSVISSSAPK RRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGVIAGLGKRITDQIWTSDPLRNSVISSSAPKIRRAAHTSAYDKNPDEQVRPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           VVPDDVIQ+QAADKYWAPHPQTGVFGPA++NPAA A NRAADGG+YS VEEEKAWFRPTS
Sbjct: 61  VVPDDVIQSQAADKYWAPHPQTGVFGPASDNPAAAAANRAADGGNYSAVEEEKAWFRPTS 120

Query: 121 LEDSEKPHGL 131
           LEDSEKPHGL
Sbjct: 121 LEDSEKPHGL 130

[Close]
BLAST of Clc07G17090 vs. NCBI nr
Match: XP_004146886.1 (late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hypothetical protein Csa_014444 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 116/133 (87.22%), Postives = 121/133 (90.98%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRS GAIAGLGKRITDQIW  DPLRNSVISSSAPKFRRAAHTSVYDKN +EQVRPS
Sbjct: 1   MAANSRSVGAIAGLGKRITDQIWTCDPLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRPS 60

Query: 61  VVPDDVIQAQ-AADKYWAPHPQTGVFGPATENPA--ADAGNRAADGGHYSGVEEEKAWFR 120
           +VPDDVIQ Q AAD YWAPHPQTGVFGPA++NPA  A A NRAADGG+YS VEEEKAWFR
Sbjct: 61  IVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFR 120

Query: 121 PTSLEDSEKPHGL 131
           PTSLEDSEKPHGL
Sbjct: 121 PTSLEDSEKPHGL 133

[Close]
BLAST of Clc07G17090 vs. NCBI nr
Match: XP_008453829.1 (PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIW-NSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRP 60
           MAANSRSAGAIAGLGKRITDQIW +SD LRNSVISSSAPKFRRAAHTSVYDKN +EQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAA-DAGNRAADGGHYSGVEEEKAWFRP 120
           S+VPDDVIQ QAADKYWAPHPQTGVFGP ++NPAA  A NRAAD G+YS  EEEKAWFRP
Sbjct: 61  SIVPDDVIQPQAADKYWAPHPQTGVFGPTSDNPAAVAAANRAADVGNYSAAEEEKAWFRP 120

Query: 121 TSLEDSEKPHGL 131
           TSLEDSEKPHGL
Sbjct: 121 TSLEDSEKPHGL 132

[Close]
BLAST of Clc07G17090 vs. NCBI nr
Match: KAG6576842.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55
Identity = 110/129 (85.27%), Postives = 115/129 (89.15%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAGAIAGL KRITDQIWN DPLRNS ISS+APKFRRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           +VPDDVIQ Q+ADKYWAPHPQTGVFGPAT NP A   N  A+GG+YS VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPVAAVANHTANGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 130
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Clc07G17090 vs. NCBI nr
Match: XP_022984594.1 (late embryogenesis abundant protein At5g17165-like [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55
Identity = 110/129 (85.27%), Postives = 114/129 (88.37%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAGAIAGL KRITDQIW  DPLRNS ISS+APKFRRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           +VPDDVIQ Q+ADKYWAPHPQTGVFGPAT NP A   N  ADGG+YS VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPMAAVANHTADGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 130
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Clc07G17090 vs. ExPASy Swiss-Prot
Match: F4KFM8 (Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN=At5g17165 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-20
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0 

Query: 42  RAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAA 101
           R  HTS YDKN++E+++PS VPD++I+   +DKYW+PHPQTGVFGP++ +  A    R  
Sbjct: 32  RNDHTSAYDKNVEEELQPSQVPDEMIKPD-SDKYWSPHPQTGVFGPSSSSTNAKDEFR-- 91

Query: 102 DGGHYSGVEEEKAWFRPTSLEDSEKPH 129
            GG    V EEKAWFRPTSLED +K H
Sbjct: 92  -GGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]
BLAST of Clc07G17090 vs. ExPASy TrEMBL
Match: A0A1S3BYE5 (uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.5e-56
Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIW-NSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRP 60
           MAANSRSAGAIAGLGKRITDQIW +SD LRNSVISSSAPKFRRAAHTSVYDKN +EQVRP
Sbjct: 1   MAANSRSAGAIAGLGKRITDQIWTSSDSLRNSVISSSAPKFRRAAHTSVYDKNPEEQVRP 60

Query: 61  SVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAA-DAGNRAADGGHYSGVEEEKAWFRP 120
           S+VPDDVIQ QAADKYWAPHPQTGVFGP ++NPAA  A NRAAD G+YS  EEEKAWFRP
Sbjct: 61  SIVPDDVIQPQAADKYWAPHPQTGVFGPTSDNPAAVAAANRAADVGNYSAAEEEKAWFRP 120

Query: 121 TSLEDSEKPHGL 131
           TSLEDSEKPHGL
Sbjct: 121 TSLEDSEKPHGL 132

[Close]
BLAST of Clc07G17090 vs. ExPASy TrEMBL
Match: A0A6J1JAZ8 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 GN=LOC111482838 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55
Identity = 110/129 (85.27%), Postives = 114/129 (88.37%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAGAIAGL KRITDQIW  DPLRNS ISS+APKFRRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWTRDPLRNSAISSAAPKFRRAAHTSTYDKNHDEQVRPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           +VPDDVIQ Q+ADKYWAPHPQTGVFGPAT NP A   N  ADGG+YS VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPHPQTGVFGPATINPMAAVANHTADGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 130
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Clc07G17090 vs. ExPASy TrEMBL
Match: A0A6J1E3E9 (late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662 GN=LOC111430463 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.1e-54
Identity = 108/129 (83.72%), Postives = 115/129 (89.15%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAGAIAGL KRITDQIWN DPLRNS ISS+APKFRRAAH+S YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLRKRITDQIWNRDPLRNSAISSAAPKFRRAAHSSTYDKNHDEQVRPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           +VPDDVIQ Q+ADKYWAP+PQTGVFGPAT NP A   N  A+GG+YS VEEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQSADKYWAPNPQTGVFGPATINPVAAVANHTANGGNYSIVEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 130
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 129

[Close]
BLAST of Clc07G17090 vs. ExPASy TrEMBL
Match: A0A6J1CHE9 (late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=3673 GN=LOC111011456 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.3e-51
Identity = 107/129 (82.95%), Postives = 115/129 (89.15%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAGAIAGLGKRIT+QIW SDPLRNS ISSSAPKFRRAAHTSVYDKN DEQ RPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSDPLRNSAISSSAPKFRRAAHTSVYDKNPDEQARPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           +VPD+VIQ Q  DKYWAPHPQTGVFGP T++P A A  +AA+GG Y+ VEEEKAWFRPTS
Sbjct: 61  IVPDEVIQPQ-PDKYWAPHPQTGVFGPVTDHPTA-AAAKAANGGSYA-VEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 130
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 126

[Close]
BLAST of Clc07G17090 vs. ExPASy TrEMBL
Match: A0A6J1FNH5 (late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447057 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.1e-50
Identity = 103/129 (79.84%), Postives = 111/129 (86.05%), Query Frame = 0 

Query: 1   MAANSRSAGAIAGLGKRITDQIWNSDPLRNSVISSSAPKFRRAAHTSVYDKNLDEQVRPS 60
           MAANSRSAGAIAGLGKRIT+QIW SD    S ISSSA KFRRAAHTS YDKN DEQVRPS
Sbjct: 1   MAANSRSAGAIAGLGKRITNQIWTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPS 60

Query: 61  VVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAADGGHYSGVEEEKAWFRPTS 120
           +VPDDVIQ QAA+KYWAPHP TGVFGP  + P A AG+RAADGG+++  EEEKAWFRPTS
Sbjct: 61  IVPDDVIQPQAAEKYWAPHPHTGVFGPEADQPTAAAGSRAADGGNHAAAEEEKAWFRPTS 120

Query: 121 LEDSEKPHG 130
           LEDSEKPHG
Sbjct: 121 LEDSEKPHG 125

[Close]
BLAST of Clc07G17090 vs. TAIR 10
Match: AT5G17165.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03150.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 3.9e-21
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0 

Query: 42  RAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRAA 101
           R  HTS YDKN++E+++PS VPD++I+   +DKYW+PHPQTGVFGP++ +  A    R  
Sbjct: 32  RNDHTSAYDKNVEEELQPSQVPDEMIKPD-SDKYWSPHPQTGVFGPSSSSTNAKDEFR-- 91

Query: 102 DGGHYSGVEEEKAWFRPTSLEDSEKPH 129
            GG    V EEKAWFRPTSLED +K H
Sbjct: 92  -GGQEDSVMEEKAWFRPTSLEDLDKTH 114

[Close]
BLAST of Clc07G17090 vs. TAIR 10
Match: AT3G03150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.4 bits (241), Expect = 8.8e-21
Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0 

Query: 41  RRAAHTSVYDKNLDEQVRPSVVPDDVIQAQAADKYWAPHPQTGVFGPATENPAADAGNRA 100
           RR+ H+S YDKN+++++  S VPD+VI+   +DKYW+PHP+TGVFGP+T   +A      
Sbjct: 37  RRSGHSSAYDKNVEDELHASAVPDEVIKPD-SDKYWSPHPKTGVFGPSTTEHSA-----T 96

Query: 101 ADGGHY-SGVEEEKAWFRPTSLEDSEKPH 129
           A+G H  + V EE AWFRPTSLEDS+K H
Sbjct: 97  AEGAHQDTAVLEETAWFRPTSLEDSDKTH 119

The following BLAST results are available for this feature:
BLAST of Clc07G17090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038901450.13.1e-6090.77late embryogenesis abundant protein At5g17165-like [Benincasa hispida][more]
XP_004146886.11.6e-5687.22late embryogenesis abundant protein At5g17165 [Cucumis sativus] >KAE8649143.1 hy... [more]
XP_008453829.11.8e-5587.12PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo][more]
KAG6576842.12.3e-5585.27Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022984594.13.9e-5585.27late embryogenesis abundant protein At5g17165-like [Cucurbita maxima][more]
BLAST of Clc07G17090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4KFM85.5e-2056.32Late embryogenesis abundant protein At5g17165 OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of Clc07G17090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYE58.5e-5687.12uncharacterized protein LOC103494437 OS=Cucumis melo OX=3656 GN=LOC103494437 PE=... [more]
A0A6J1JAZ81.9e-5585.27late embryogenesis abundant protein At5g17165-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1E3E92.1e-5483.72late embryogenesis abundant protein At5g17165-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1CHE96.3e-5182.95late embryogenesis abundant protein At5g17165-like OS=Momordica charantia OX=367... [more]
A0A6J1FNH54.1e-5079.84late embryogenesis abundant protein At5g17165-like isoform X1 OS=Cucurbita mosch... [more]
BLAST of Clc07G17090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17165.13.9e-2156.32unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G03150.18.8e-2153.93unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..130
NoneNo IPR availablePANTHERPTHR35122:SF2OSJNBA0093F12.14 PROTEINcoord: 1..128
IPR039291Late embryogenesis abundant protein At5g17165-likePANTHERPTHR35122OSJNBA0093F12.14 PROTEINcoord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc07G17090.2Clc07G17090.2mRNA