Clc07G15420 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G15420
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Endonuclease III homolog
Location	ClcChr07: 30024331 .. 30032197 (+)
RNA-Seq Expression	Clc07G15420
Synteny	Clc07G15420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAGATTGGATCGTTCTAATACTTCCCATTATCATGTTCTTTGCTTGTCCTATTCGAACACCGGCGCTTTCGATTACATTTGCGCGAAGAATTACATGCAGCGGCATGTCTAAAGGAAGTTTATCTTCCTTGCCAACAAGCTCAAACGAAGTCCCTCCAAATCCAGGTCCAATCATGTTTCGTTTTCTGTTTAATTCTTCCTTCGATTTTAATCTTAGGATATTCCCTAACTGGGTTTTCACTGCTTTTAGGAATTTCAGGTGTTAAGTCCTCCAATAGCGTTTCTGAGTCTGTAACTCGTGTATTTGTGAGGAGAAGAGTGAAAAAGAATGCTGAAGGTCAAGATAGCGGGCTTGAAGTTGAACCTAAAGTCGACGCTAAAGTAAGAGCTTCACCATTTTCCTTTTCATCTTCCAAACATGTCTTTCATCCTGGAAAATGGGTCATTTTAGCTTTAGATGGTCGTTTTTTCTGGTGATTACCTTTGTTAAGACTATGCAGGCATATTCCTTTTCTTTTTTACTCTCTCTGTGTATCACTCTCTGTTTCACTCACAGTTTAATTTATGCATTCAGTTAATGCTATATAAGCTATAAACATTCATAGCTATGTTAGCATGGTATTCTAGAAACTTGCGATTTGATTAGATTATAAATCCTTTATAGATAAAGGTCCTACATGGTGAAAGTTAATAAGTTAAACTTCTAATCTTTTTCCCGTACAGCGCTGCTGTCCTCCTAATATTGAAGATTTTGCATTCAAAAGAACAAAGGATTCCCCTGGATCAAGTAATTTCTTACCTTAGCAGCACTTTTGCTTGTAGGAATTTTGCTTTTCTACTGGATGACCGATACAGCCAAATTATGAGAACGCTCCCATGTAAATTGTTAATCTTCTAAAATAAAATGAGAAAATATGTCGAGAAAATAATTATTTCATAAAATTTGTTTTGAAGGACTATGTAATATGGATATTGTACAGATTTCTCCTTGATTTTCATTTCAGTTTGTCAAGTGCAATCAGTCTTGATTAAATTTTGGTTCAGTTTGATGTGAGAAGCACACAAAAGAAAGACGTCGCCTGAATGTGCATTTTCAGAAAATAGGAAAATATAATTACACACCACATATATAAGATTCTATTCCTACATGAATTAATTTGTCACCATAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCCCTCTTCGGGGGCGGCCCACTTTTAGCCGTTCTAGCGATTATGCCCGTTTTAGCGCTACCGTCCACCCCTATCATCATTAAATGTATCATAAATAATAAGGTAACAAGGAATACATGATTGGATATAATATTTCTTTTTTGTGCTAACATAGCAGTCAAGAGAAGCGTTTTAGTGTTATCTAACAAAATATATGATGGGCATAAATGTACTTTTAGTTTAGAAATCAAACTTTATGCACTTATTTTTCATTTTCAAGAGATCACACATGATAAAAACTAAAAGGACGTACATCTAGTCAAATGTTAAAAAATCAGACCATAAAATTGCTTTGCTTCAGCAAGACCAGAAAGTGGCAAAAAAGTAATCAATAGGTAACCGAGGCCAGTGCATGTTTAAGGTGTGCTATGCCTGCATCTGCTTGGCAGGTGGGGGTTGCTCAGCTCTCATCGGCTATTGCCATTGGTAGCCTCGAGGTGTCACCTCGAAAACACCGATCCATCTTGAATTTTGATAATTTTTTATTCACCAAAATGTCTGGCCTTACCTGTAAAGAAAAAACCTGGATAGTTGTAATAGATATGTGTATTGAACCAGAAGATGTACAGTGGAGAAGGAGCACAAATGTGTCAAACCAATCTGGGAATTAGAGAGGTCTTAAAGTTCTCCAATTAGTGAATATCACAACCTTGGGTGATTATGAAAGCAGTTTCATATCAATGAAATCCTGTTTGAAAGCTTGCTCACAGAACTAATTGTAGTTTGTATTACTGAATTATATTTTAGCGTGTTTGGAGATGTTAATTGAGTTTCACACTTAAGTTTTCATCTTGTTCTCACTCGTGAAATAGTGTGTGCATGCCTCCTACACATACACTCAAACATGCAAAGATACAAAGTGTGAAGATATGCTTTGACACATATAATATGAAACTGTTGTCTTCCTGACTCCCTACCCTCCCATCTGTCATCACTTTTTATGAATTGGCACTGCAGGGAAATCAAAGCCTCCTCTGGATCCCCTTCTCATTGGAATTGAAGATTCTAATCCAACTAGACAGAAAAACATTGCAGAAAGAGGTGAGTGATCATTTTTTAATTTTTTCTCAGGAGGAATTTATGCTGTCCATGTATTTAGTAGAGAATTGATGTGACAAATCACTGATTAAGAGATTACATTCCCCCCATAATTTTTATTAGTTAATGACAGATAAGTTTTTAAAGTAATTATTAGATTTTTTTTTTTTTGTTTCCTAAGAAAAATCTGAATTACGATATAGGTAAACCACCTGTGAATTGGGAAAAAGTCCTTGAAGGAATTCGGGAAATGAGATCCTCTGAAGAAGCTCCAGTGGATACCATGGGATGTGGGCAAGCTGGTAGTACTCTTCCTCCCAAGGTAAATTCCCGATTTTGAATGGACAATATCTCAACGTCCTCAGTTGTTAGGCGGCATTGGGATTGGTAATTTTAAGTATTGTAATTCTGCTCTTCTGGCTAAATGGACGTGTCATTACTGAGCATGGTTCCCAATCCGGCACAAACATTCATTTCTTTGATGCACCATGAAATCAATAAATATATCAATAATCAGATGTGAAGATGACATAATAACCTTCTATTTTCTTTTCCTTTAAGGCCTTGCAGGCACTATATATTGATAACAGAGGACCCATTGTTCTTTATTAAATTGTATTTGATATCTGCAGCATTTTATTAACCAATAACTACTCGTTTACTTTATTTTTATTAGGAAAGAAGATTCGCTGTCTTGGCATCTTCTCTTCTCTCAAGCCAAACCAAAGACCACGTGACTCATGGCAAGTTCTTGTTCTCTGAAATAATTGGTTGATAGAGAATTTTAATTTAACACATTTTCCTGTAGTATTTCTGAAAATTCATATGATTATTAATTGCTTGGTCTTTCAAGCAATGAGTAAACAAAAATTTTAAGAGGAGGAATTTTCCTTCATTCTCTGAATATCTGCTGGTTTTTTACCATTTCGAGAGTTTCGCTCCTTGGCCAAGACCAACATCACTCCTGTAACTTCAACCATGAGCTTATCCTCCATTTTCGGAGGTTTCCCCTTCTGTCGGTAATCAAATGCTCTTATCTTTTTCAACTTTCCTTCGTATGCTTTCATGATTCTTGCTGGAACTTTCTTCCCTTGTCCCCCACTGTTTGTGTGCTTCAGTCTCAATTGTTCATCCAGCAATCAACCTTTCTTTGGATGTAGTTCATGAGATCATAGCTCATTGGCTGTAAACCTACCAATTTGTAATTTTCCCTTCCAGAAATTACCTAAGAGTCAAAGACAAAGACTGCCTTTCCTGTTCTCACAGTAGCTGTTACTCTTCTTGATTGCTTGTAAGAGGGTTGGTTGTTTTACTTGAAAACCTGTTTACCACTTCAGCCTACTTTTAGGGACTAAATGTTTTTTTGCCATATGATGGTGCTTTCTCAGTGCCTAAGAACCCTGCCATCAAATCCTGTACCATGATATGGCAGAACAAAAAAGAAAGTCTGCTACAAACTTGAGTTGAACAAACTCTTGTCTTAGCTTTTACTCTGGAACTACAATTTGAATTCCAGTTTTCTTGGCGTACTTAACTATATATTGGGGTGGGATAACAGTAGAGTTGTGGCTTCTATGCCATCTCATTGCTAAATAATGCCTTTTGATAAGTGATGGGAGCAGAAAGAACTAGTATCTCGTGAGACTTCTGCCTTTAAGAAATCTGGACTCCTATCCTGCAGAATTCAGACTACTTCTCCCGTCTCTAATTCCCGCCCTCCCCTATAACTGATTACCCAACTAACTATCAGCAATCAACAACCAAAGGTTACAGCCGGGAACTGACAAACTACCCTTGCACCACCATCATTGATAGTACAAGTCAACCACTCAAGCTGTCTACTCCTGGCATGTGTAAGTCTGTTTGGGTGCAGGAAAGTCTATCAAGAAGAAACAACAAGCTCAGATATATAAGTTTATCTTCATGAATCATTTTATCTTCATGAATCATGATAATAAAATAAGAATGTCAAAAATTTATATTTGGAAGGTAAACTTTTAGTGCTCAGGGCAGTACGTTATTTGTTGTTTCCCAAAGATATTAAGCTCTCTCTTCTATTATTTTCTTTAATTGACAAAAGAACTTTCAGGAGTGCAGGAGCAGCGTTGCGTCTCCAAGAAAGTGGTCTTCTTACTGCTGATGCCATGGACAAAGCTGATGAAGCAACCATTAAAAGCTTGATTTACCCGGTATGTTTTCTTGGAGATCATTGAGCAATGGCACATAAATTTCCCGTTGCATCTGAATCACGTGAACAGAAACATCTGAAAAATAGCATTTATATTTGTATGGCTGTTCTGTTCATGTTCAGGCACACCTTGCACTTCTTTTCTCCACAAAAGTTCCATTTTCTGCAAATAATTTAGAGGTTTTTTTGTATCCATTCCATCTTGCAGGTTGGATTTTATTCTACAAAGGCTAAGAATTTGAAGAAGATTGCAAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAACTACTTCTACTACCTGGGATAGGCCCTAAGATTGCACATTTGGTATGACAGATTGTGTTTTATTAGAAAAGAAGGAATTTATCGGGTAATGGGTATGCTTCCATGACTCATCATATTTCTTATGTGGCATTTAGATCATGATTATGGCTTGGAACGATGTTCAAGGGATATGTGTAGATACTCATGTGCATCGCATTTGCAATCGGCTTGGATGGGTGTCTGGGAAAGGCTCAAAACAGGTAACTGTGGAATGTGTACTTGACTCCACTTGTTTACTAACATGAGTGGTTTCTGACTTCAGATTTGAATTTCGTCCTTTTCCAAAACTTCAAAATTTGCTCATATTACTGACACTGTTACTGGTATAGAGTATGCATAAAACACTTTTGAGGTGGTGTTATATGTAAACTAGATGTTTTTAATGCTTTTCTTGCCAAGTCGAATGGACTTGCCTCCCTCAAGTGAATCAAATTATTCCTATTAACTTTTTCCTTTCAATAGATTCAATGCTTTGTGGTAGTTGTCCTCCTCATATGATTGTCCTCGGATTTTCTGAATCATGTTTTGATGTCTTTTTAGTGAAGACAATAGTATCATAAAATAAAATTTTCCTCTAGCAGTGTTATGGAAGTTTTTGAAAAAAGTGTAGGTAATGAACTAGTTGGAATATCATGTTTGCAAGTATTATGCCTGTCTTGCTAATGCACAAGTCTGCTTTAGTTTTAATCACATTGAAGTGAGTACGGATTTGTCATCAATTCATCAAGGATGAAAAATATCGATGTTGATATTGATATTGGTAACTCATATTTATGGGAATATCAATGGATATTTCCAACCAAAAAAAAAGAATCACGAATATCACTGGGCCTTTAAAAAATATATATATGTTTATTTATTTATTTTTGTAAAATTTTAGAACAAGCTTATTTAAGTCATAAACTACTAATTTATTTATATTTATATCAATAATTATAAGACAAATATAGTAGTAATACAATAATAGATAATATCGAGGGTTGGAATAATGAACTTCAATACATTTACTATGGATTCATGCGTCAGTTTTCTTATCAGATTTGTGGTTGGAAAGGAACTGAAGATTTTTTAAAGAGAAGTATTTTCCTTGGGTTGTTCAGTTTGATTCCAACACCTTCTTGCTTCATTTTAGTGCTCTTTTTTTTAAAAAAAAAAAAAATCTTTTGTTGATTTTTCATCTTTAGATATATATATTATCAGATTTCCTTTTTATTTCCTTTGTAACTATCACTCCCTTGTGGAGTTCTGTATCCTTTGGGCAAGGATGTTTTTTCATTTAATCAATGAAGTTTCGTTTCTTGTTCAAAAAAATTTATAACAAATGGGAAGAGAAATCTTCGATACAAAGGAATTACAAGAGACTGTTCCAATTAGACAAAAGAAACGAAAAACTATACAGTAGAGAATTCAATTAACAGTACGCCAAGAGCAAGGAAGACAATGCTATTAAAGAAACTGTATAATCCTTTTCCTTTGTACCGAGGGGTTCCTTTCAATCCTTATTTATAGAAAGGCTGAATAAAAGAAATATCAGAAAATGACATCAGTATCTTGATCCTTACTTGCACTACATTCTTTCTTTTCTAAATTGTTTCCAAGAGATGTCATTGCTATAATTTGCTTGCTTTTTTCCTTTCCTAGAAAACATCCACTCCTGAAGAAACTCGAGTGGCATTAGAGCTGTGGCTGCCAAAAGAAGAATGGGTTCCAATTAATCCTCTTCTGGTATGTAATGTTTTTTTTATAAATAGTTGCTGCCCTGGTACCATTATACAATGAATTTGATAGCATTATTTCCTTATAAACGTACTTGGTAAAACACAGTACACCATATATTTTACCCATGAACATCAATATTCTTAACTCATTATGTGCATTTGCATACCGTACATTCACACACGGTGTAGGATGTTTACCTCTTGGGAAAACACTCCACTGCATCTAAAAATTGAGTATTTAGGTAATTTCTTATTGCCATTTGCAATAATTTATGCTGCTTTTGGTCCAAAGTACCCTTAAGAAAATGATTTGCAAGTGAAAATTGCAGATATATTATGAATTTTATGAGTTGTACAAACATTAGTAAAATAAGGGTCTGTACTTGATCTGATCATCCGGCATATAAACTAGTGGCTGGGGAGAAATATTCTCCTCCCCCATGCATCTTCTAGGAGTGTAGTAGGCACACATAAATATTATTAGTTTTATAGTGTTTAACCCTCGTGAGTTGACCCAGTGATAAAAGGGGAGACATAGTCTTAATAAATGGCTAGAGGGCATAGGTTCAATATATGGTAGCCACTTATCTAGGAATTAATATCCTACAAGTTTCTTTGACACCCAAATGTTGTAAGATTAGGCGGGCTGTCCCGTGAGAATAGTGGCACAGATATCAAAATATACTGTAAAATACTGAAATGGCTGACAAGTATGCTTCAAGTTTACTCAGTTCAATTGGTTTTTGTTCGTGTTTTTCATTTTTGGCTTTCACCTCTACTTTTTTCAAGCAATTACTGAGTTGGTGGCTTGTGCTCTTTTGCTTCCTATGATCTGAAATTTGTTGGGTTGTCTGGAATCTAGGTTAAGAAACATCCTCCCTTGTAATTTCTTATTACATCTCCATTTATTTATTTATTTTTGATCATTGTTTGGCATGTGAAACAGGTTGGTTTTGGACAGACTATATGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGTGACCTATGTCCATCTGCATTTAAGGAGTCTTCAAGCCCATCTCCCAAATTAAAGGGTTCAAGTTCTACCAAAACGCTATGATCTTTTTGTATGAATTGAAATATTTACCAGTCTCACATTTCCTCCCAAGTTTTGGTTTTGTAGTTTTTTTTTTTTTTGGGCTCCGTAATGGTTTACAGATTTAGAGCTTCCATTATGGTTTCTATCACCAAGTGTTAATAGATAGATAGGTGGATATTGAAGGATCTCAATTGGCCAATGTTGTGTAGAACGAACCTTGTTATTGATGTATATCAATGTTCTCG

mRNA sequence

CTTAGATTGGATCGTTCTAATACTTCCCATTATCATGTTCTTTGCTTGTCCTATTCGAACACCGGCGCTTTCGATTACATTTGCGCGAAGAATTACATGCAGCGGCATGTCTAAAGGAAGTTTATCTTCCTTGCCAACAAGCTCAAACGAAGTCCCTCCAAATCCAGGAATTTCAGGTGTTAAGTCCTCCAATAGCGTTTCTGAGTCTGTAACTCGTGTATTTGTGAGGAGAAGAGTGAAAAAGAATGCTGAAGGTCAAGATAGCGGGCTTGAAGTTGAACCTAAAGTCGACGCTAAAGTAAGAGCTTCACCATTTTCCTTTTCATCTTCCAAACATGTCTTTCATCCTGGAAAATGGGTCATTTTAGCTTTAGATGGTCGTTTTTTCTGCGCTGCTGTCCTCCTAATATTGAAGATTTTGCATTCAAAAGAACAAAGGATTCCCCTGGATCAAGTGGGGGTTGCTCAGCTCTCATCGGCTATTGCCATTGGTAGCCTCGAGGTGTCACCTCGAAAACACCGATCCATCTTGAATTTTGATAATTTTTTATTCACCAAAATGTCTGGCCTTACCTGGAAATCAAAGCCTCCTCTGGATCCCCTTCTCATTGGAATTGAAGATTCTAATCCAACTAGACAGAAAAACATTGCAGAAAGAGGAAAGAAGATTCGCTGTCTTGGCATCTTCTCTTCTCTCAAGCCAAACCAAAGACCACGTGACTCATGGCAATTTCGCTCCTTGGCCAAGACCAACATCACTCCTGTAACTTCAACCATGAGCTTATCCTCCATTTTCGGAGGTTTCCCCTTCTGTCGGGCAGTACGTTATTTGTTGTTTCCCAAAGATATTAAGCTCTCTCTTCTATTATTTTCTTTAATTGACAAAAGAACTTTCAGGAGTGCAGGAGCAGCGTTGCGTCTCCAAGAAAGTGGTCTTCTTACTGCTGATGCCATGGACAAAGCTGATGAAGCAACCATTAAAAGCTTGATTTACCCGGTTGGATTTTATTCTACAAAGGCTAAGAATTTGAAGAAGATTGCAAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAACTACTTCTACTACCTGGGATAGGCCCTAAGATTGCACATTTGATCATGATTATGGCTTGGAACGATGTTCAAGGGATATGTGTAGATACTCATGTGCATCGCATTTGCAATCGGCTTGGATGGGTGTCTGGGAAAGGCTCAAAACAGAAAACATCCACTCCTGAAGAAACTCGAGTGGCATTAGAGCTGTGGCTGCCAAAAGAAGAATGGGTTCCAATTAATCCTCTTCTGGTTGGTTTTGGACAGACTATATGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGTGACCTATGTCCATCTGCATTTAAGGAGTCTTCAAGCCCATCTCCCAAATTAAAGGGTTCAAGTTCTACCAAAACGCTATGATCTTTTTGTATGAATTGAAATATTTACCAGTCTCACATTTCCTCCCAAGTTTTGGTTTTGTAGTTTTTTTTTTTTTTGGGCTCCGTAATGGTTTACAGATTTAGAGCTTCCATTATGGTTTCTATCACCAAGTGTTAATAGATAGATAGGTGGATATTGAAGGATCTCAATTGGCCAATGTTGTGTAGAACGAACCTTGTTATTGATGTATATCAATGTTCTCG

Coding sequence (CDS)

ATGTTCTTTGCTTGTCCTATTCGAACACCGGCGCTTTCGATTACATTTGCGCGAAGAATTACATGCAGCGGCATGTCTAAAGGAAGTTTATCTTCCTTGCCAACAAGCTCAAACGAAGTCCCTCCAAATCCAGGAATTTCAGGTGTTAAGTCCTCCAATAGCGTTTCTGAGTCTGTAACTCGTGTATTTGTGAGGAGAAGAGTGAAAAAGAATGCTGAAGGTCAAGATAGCGGGCTTGAAGTTGAACCTAAAGTCGACGCTAAAGTAAGAGCTTCACCATTTTCCTTTTCATCTTCCAAACATGTCTTTCATCCTGGAAAATGGGTCATTTTAGCTTTAGATGGTCGTTTTTTCTGCGCTGCTGTCCTCCTAATATTGAAGATTTTGCATTCAAAAGAACAAAGGATTCCCCTGGATCAAGTGGGGGTTGCTCAGCTCTCATCGGCTATTGCCATTGGTAGCCTCGAGGTGTCACCTCGAAAACACCGATCCATCTTGAATTTTGATAATTTTTTATTCACCAAAATGTCTGGCCTTACCTGGAAATCAAAGCCTCCTCTGGATCCCCTTCTCATTGGAATTGAAGATTCTAATCCAACTAGACAGAAAAACATTGCAGAAAGAGGAAAGAAGATTCGCTGTCTTGGCATCTTCTCTTCTCTCAAGCCAAACCAAAGACCACGTGACTCATGGCAATTTCGCTCCTTGGCCAAGACCAACATCACTCCTGTAACTTCAACCATGAGCTTATCCTCCATTTTCGGAGGTTTCCCCTTCTGTCGGGCAGTACGTTATTTGTTGTTTCCCAAAGATATTAAGCTCTCTCTTCTATTATTTTCTTTAATTGACAAAAGAACTTTCAGGAGTGCAGGAGCAGCGTTGCGTCTCCAAGAAAGTGGTCTTCTTACTGCTGATGCCATGGACAAAGCTGATGAAGCAACCATTAAAAGCTTGATTTACCCGGTTGGATTTTATTCTACAAAGGCTAAGAATTTGAAGAAGATTGCAAAAATATGTCTTATGAAGTATGGTGGGGACATACCTAGATCATTGGAGGAACTACTTCTACTACCTGGGATAGGCCCTAAGATTGCACATTTGATCATGATTATGGCTTGGAACGATGTTCAAGGGATATGTGTAGATACTCATGTGCATCGCATTTGCAATCGGCTTGGATGGGTGTCTGGGAAAGGCTCAAAACAGAAAACATCCACTCCTGAAGAAACTCGAGTGGCATTAGAGCTGTGGCTGCCAAAAGAAGAATGGGTTCCAATTAATCCTCTTCTGGTTGGTTTTGGACAGACTATATGCACTCCCCTTAGACCCAAATGTGGAAATTGCAGTGTTAGTGACCTATGTCCATCTGCATTTAAGGAGTCTTCAAGCCCATCTCCCAAATTAAAGGGTTCAAGTTCTACCAAAACGCTATGA

Protein sequence

MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVTRVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCAAVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLFTKMSGLTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQFRSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRTFRSAGAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTKTL

Homology

[Close]

BLAST of Clc07G15420 vs. NCBI nr
Match: XP_038878185.1 (endonuclease III homolog 2, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 601.7 bits (1550), Expect = 5.6e-168
Identity = 341/486 (70.16%), Postives = 357/486 (73.46%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           M FACPIRTPA SITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSN VSES T
Sbjct: 1   MIFACPIRTPAFSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNGVSESET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKKNAEGQ SGLEVEPKVDAKVRAS FSFSSSKH+FHPGK VILALDGRF   
Sbjct: 61  RVFVRRRVKKNAEGQVSGLEVEPKVDAKVRASSFSFSSSKHIFHPGKCVILALDGRF--- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                             L   P       N ++F F  TK S 
Sbjct: 121 ----------------------------------LRCCPP------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + KSK PLDPLL GIE SNPTRQK IAE GK                P  +W+      
Sbjct: 181 GSRKSKLPLDPLLNGIEVSNPTRQKGIAEGGK----------------PPVNWEKVLEGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 RKMRSSEEAPV-DTMG----------CGQAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
           EELL+LPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR
Sbjct: 361 EELLILPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 416

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 478
           VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS
Sbjct: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 416

[Close]

BLAST of Clc07G15420 vs. NCBI nr
Match: XP_038878187.1 (endonuclease III homolog 2, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 590.9 bits (1522), Expect = 9.9e-165
Identity = 338/486 (69.55%), Postives = 354/486 (72.84%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           M FACPIRTPA SITFARRITCSGMSKGSLSSLPTSSNEVPPNP   GVKSSN VSES T
Sbjct: 1   MIFACPIRTPAFSITFARRITCSGMSKGSLSSLPTSSNEVPPNP---GVKSSNGVSESET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKKNAEGQ SGLEVEPKVDAKVRAS FSFSSSKH+FHPGK VILALDGRF   
Sbjct: 61  RVFVRRRVKKNAEGQVSGLEVEPKVDAKVRASSFSFSSSKHIFHPGKCVILALDGRF--- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                             L   P       N ++F F  TK S 
Sbjct: 121 ----------------------------------LRCCPP------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + KSK PLDPLL GIE SNPTRQK IAE GK                P  +W+      
Sbjct: 181 GSRKSKLPLDPLLNGIEVSNPTRQKGIAEGGK----------------PPVNWEKVLEGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 RKMRSSEEAPV-DTMG----------CGQAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
           EELL+LPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR
Sbjct: 361 EELLILPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 413

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 478
           VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS
Sbjct: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 413

[Close]

BLAST of Clc07G15420 vs. NCBI nr
Match: XP_038878188.1 (endonuclease III homolog 2, chloroplastic-like isoform X3 [Benincasa hispida])

HSP 1 Score: 539.3 bits (1388), Expect = 3.4e-149
Identity = 314/486 (64.61%), Postives = 329/486 (67.70%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           M FACPIRTPA SITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSN VSES T
Sbjct: 1   MIFACPIRTPAFSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNGVSESET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKKNAEGQ SGLEVEPKVDAK    P                           
Sbjct: 61  RVFVRRRVKKNAEGQVSGLEVEPKVDAKRCCPP--------------------------- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         N ++F F  TK S 
Sbjct: 121 ----------------------------------------------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + KSK PLDPLL GIE SNPTRQK IAE GK                P  +W+      
Sbjct: 181 GSRKSKLPLDPLLNGIEVSNPTRQKGIAEGGK----------------PPVNWEKVLEGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 RKMRSSEEAPV-DTMG----------CGQAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
           EELL+LPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR
Sbjct: 361 EELLILPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 386

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 478
           VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS
Sbjct: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 386

[Close]

BLAST of Clc07G15420 vs. NCBI nr
Match: XP_038878189.1 (endonuclease III homolog 2, chloroplastic-like isoform X4 [Benincasa hispida])

HSP 1 Score: 528.9 bits (1361), Expect = 4.6e-146
Identity = 311/486 (63.99%), Postives = 326/486 (67.08%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           M FACPIRTPA SITFARRITCSGMSKGSLSSLPTSSNEVPPNP   GVKSSN VSES T
Sbjct: 1   MIFACPIRTPAFSITFARRITCSGMSKGSLSSLPTSSNEVPPNP---GVKSSNGVSESET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKKNAEGQ SGLEVEPKVDAK    P                           
Sbjct: 61  RVFVRRRVKKNAEGQVSGLEVEPKVDAKRCCPP--------------------------- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         N ++F F  TK S 
Sbjct: 121 ----------------------------------------------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + KSK PLDPLL GIE SNPTRQK IAE GK                P  +W+      
Sbjct: 181 GSRKSKLPLDPLLNGIEVSNPTRQKGIAEGGK----------------PPVNWEKVLEGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 RKMRSSEEAPV-DTMG----------CGQAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
           EELL+LPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR
Sbjct: 361 EELLILPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 383

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 478
           VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS
Sbjct: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 383

[Close]

BLAST of Clc07G15420 vs. NCBI nr
Match: XP_004152104.1 (endonuclease III homolog 1, chloroplastic [Cucumis sativus] >KGN53081.2 hypothetical protein Csa_014884 [Cucumis sativus])

HSP 1 Score: 517.7 bits (1332), Expect = 1.1e-142
Identity = 302/486 (62.14%), Postives = 318/486 (65.43%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           MFFACPIR PALSITFARRITCS MSKGS SSLPTSSNEVPPNPGIS VKSSN VSE  T
Sbjct: 1   MFFACPIRIPALSITFARRITCSAMSKGSSSSLPTSSNEVPPNPGISSVKSSNGVSEPET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKK AE QDSG EVEPK+D K    P                           
Sbjct: 61  RVFVRRRVKKIAESQDSGFEVEPKIDTKRSCPP--------------------------- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         N ++F F  TK S 
Sbjct: 121 ----------------------------------------------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + K KPPLD LL GIEDSNPT  K  AERGK                P  +W+      
Sbjct: 181 GSRKLKPPLDLLLNGIEDSNPTTHKGKAERGK----------------PPVNWEKVLKGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 REMRSSEEAPV-DTMG----------CGRAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTADAMDKADE TIKSLIYPVGFYSTKAKNLKKIA+ICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTADAMDKADEETIKSLIYPVGFYSTKAKNLKKIARICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
            ELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR
Sbjct: 361 AELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 386

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 478
           V LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS
Sbjct: 421 VGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 386

[Close]

BLAST of Clc07G15420 vs. ExPASy Swiss-Prot
Match: B9DFZ0 (Endonuclease III homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH2 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.3e-79
Identity = 147/220 (66.82%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 260 CRAVRYLLFPKDIKLSLLLFSLIDKRTFRS-AGAAL-RLQESGLLTADAMDKADEATIKS 319
           C      L PK+ +  +L+ +L+  +T     GAA+ RL ++GLLT +A+DKADE+TIK 
Sbjct: 167 CDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKE 226

Query: 320 LIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQ 379
           LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR+LEELL LPG+GPKIAHL++ +AWNDVQ
Sbjct: 227 LIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQ 286

Query: 380 GICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTI 439
           GICVDTHVHRICNRLGWVS  G+KQKTS+PEETRVAL+ WLPK EWV IN LLVGFGQTI
Sbjct: 287 GICVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQTI 346

Query: 440 CTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTKTL 478
           CTPLRP CG CS++++CPSAFKE+ S S KLK S  +K L
Sbjct: 347 CTPLRPHCGTCSITEICPSAFKETPSTSSKLKKSIKSKKL 386

[Close]

BLAST of Clc07G15420 vs. ExPASy Swiss-Prot
Match: Q9SIC4 (Endonuclease III homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH1 PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 5.6e-78
Identity = 144/218 (66.06%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 260 CRAVRYLLFPKDIKLSLLLFSLIDKRTFRSAGAAL--RLQESGLLTADAMDKADEATIKS 319
           C      L P + + ++LL +L+  +T      A   RL ++GLLT +A+DKADE+TIK 
Sbjct: 160 CDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKE 219

Query: 320 LIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQ 379
           LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++LL LPGIGPK+AHLI+ +AWNDVQ
Sbjct: 220 LIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQ 279

Query: 380 GICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTI 439
           GICVDTHVHRICNRLGWVS  G+KQKT++PEETRVAL+ WLPKEEWV INPLLVGFGQ I
Sbjct: 280 GICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMI 339

Query: 440 CTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTK 476
           CTP+RP+C  CSVS LCP+AFKE+SSPS KLK S+ +K
Sbjct: 340 CTPIRPRCEACSVSKLCPAAFKETSSPSSKLKKSNRSK 377

[Close]

BLAST of Clc07G15420 vs. ExPASy Swiss-Prot
Match: A7M7B9 (Endonuclease III-like protein 1 OS=Gallus gallus OX=9031 GN=NTHL1 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-47
Identity = 98/186 (52.69%), Postives = 128/186 (68.82%), Query Frame = 0


Query: 272 IKLSLLLFSLIDKRTFRSAGAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKN 331
           + LSL+L S    +   ++ A LRL++ G LT D++ + D+AT+  +IYPVGF+  K K 
Sbjct: 101 VLLSLMLSSQTKDQV--TSAAMLRLRQRG-LTVDSILQMDDATLGQIIYPVGFWRNKVKY 160

Query: 332 LKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNR 391
           +K+   I   KYGGDIP ++EEL+ LPG+GPK+AHL M +AWN V GI VDTHVHRI NR
Sbjct: 161 IKQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNR 220

Query: 392 LGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS 451
           L WV     K++T  PEETRVALE WLP++ W  IN LLVGFGQ  C P+ P+C  C   
Sbjct: 221 LKWV-----KKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLPVNPRCKECLNQ 278

Query: 452 DLCPSA 458
           D+CP+A
Sbjct: 281 DICPTA 278

[Close]

BLAST of Clc07G15420 vs. ExPASy Swiss-Prot
Match: P78549 (Endonuclease III-like protein 1 OS=Homo sapiens OX=9606 GN=NTHL1 PE=1 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 7.4e-46
Identity = 97/186 (52.15%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 272 IKLSLLLFSLIDKRTFRSAGAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKN 331
           + LSL+L S    +   +AGA  RL+  G LT D++ + D+AT+  LIYPVGF+ +K K 
Sbjct: 132 VLLSLMLSSQTKDQV--TAGAMQRLRARG-LTVDSILQTDDATLGKLIYPVGFWRSKVKY 191

Query: 332 LKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNR 391
           +K+ + I    YGGDIP S+ EL+ LPG+GPK+AHL M +AW  V GI VDTHVHRI NR
Sbjct: 192 IKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 251

Query: 392 LGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS 451
           L W     +K+ T +PEETR ALE WLP+E W  IN LLVGFGQ  C P+ P+C  C   
Sbjct: 252 LRW-----TKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQ 309

Query: 452 DLCPSA 458
            LCP+A
Sbjct: 312 ALCPAA 309

[Close]

BLAST of Clc07G15420 vs. ExPASy Swiss-Prot
Match: Q2KID2 (Endonuclease III-like protein 1 OS=Bos taurus OX=9913 GN=NTHL1 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-45
Identity = 96/186 (51.61%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 272 IKLSLLLFSLIDKRTFRSAGAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKN 331
           + LSL+L S    +   +AGA  RL+  G LT D++ + D++T+ +LIYPVGF+ +K K 
Sbjct: 125 VLLSLMLSSQTKDQV--TAGAMQRLRARG-LTVDSILQTDDSTLGALIYPVGFWRSKVKY 184

Query: 332 LKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNR 391
           +K+ + I   +Y GDIP S+ EL+ LPG+GPK+AHL M +AW  V GI VDTHVHRI NR
Sbjct: 185 IKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 244

Query: 392 LGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS 451
           L W     +K+ T +PEETR ALE WLP+E W  IN LLVGFGQ  C P+RP+C  C   
Sbjct: 245 LRW-----TKKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCLPIRPRCQACLNR 302

Query: 452 DLCPSA 458
            LCP+A
Sbjct: 305 ALCPAA 302

[Close]

BLAST of Clc07G15420 vs. ExPASy TrEMBL
Match: A0A1S3BX24 (Endonuclease III homolog OS=Cucumis melo OX=3656 GN=LOC103494544 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 2.8e-141
Identity = 299/486 (61.52%), Postives = 317/486 (65.23%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           MFFACPIR PALSITFARRITCS MSKGS SSLPTSSNEVPPNPGIS VKSSN VSE  T
Sbjct: 1   MFFACPIRIPALSITFARRITCSAMSKGSSSSLPTSSNEVPPNPGISSVKSSNGVSEPET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKK AE QDSG EVEPK+D K    P                           
Sbjct: 61  RVFVRRRVKKIAESQDSGFEVEPKIDTKRSCPP--------------------------- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         N ++F F  TK S 
Sbjct: 121 ----------------------------------------------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + +SKPP D LL GIE S PT  K  A RGK                P ++W+      
Sbjct: 181 GSRESKPPPDLLLNGIEGSTPTTHKGNAGRGK----------------PPENWEKVLKGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 REMRSSEEAPV-DTMG----------CGRAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTA+AMDKADE TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
           EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR
Sbjct: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 386

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 478
           V LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS
Sbjct: 421 VGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 386

[Close]

BLAST of Clc07G15420 vs. ExPASy TrEMBL
Match: A0A5A7TN21 (Endonuclease III homolog OS=Cucumis melo var. makuwa OX=1194695 GN=NTH1 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 2.4e-140
Identity = 299/489 (61.15%), Postives = 317/489 (64.83%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           MFFACPIR PALSITFARRITCS MSKGS SSLPTSSNEVPPNPGIS VKSSN VSE  T
Sbjct: 1   MFFACPIRIPALSITFARRITCSAMSKGSSSSLPTSSNEVPPNPGISSVKSSNGVSEPET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKK AE QDSG EVEPK++ K    P                           
Sbjct: 61  RVFVRRRVKKIAESQDSGFEVEPKINTKRSFPP--------------------------- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         N ++F F  TK S 
Sbjct: 121 ----------------------------------------------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + +SKPP D LL GIE S PT  K  A R K                P ++W+      
Sbjct: 181 GSRESKPPPDLLLNGIEGSTPTTHKGNAGRSK----------------PPENWEKVLKGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLI-----DKRTFR 300
           R +  +   PV  TM           C      L PK+ + ++L  SL+     D  T  
Sbjct: 241 REMRSSEEAPV-DTMG----------CGRAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 SAGAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIP 360
           +AGAALRLQESGLLTA+AMDKADE TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIP
Sbjct: 301 NAGAALRLQESGLLTAEAMDKADEETIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIP 360

Query: 361 RSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPE 420
           RSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPE
Sbjct: 361 RSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPE 389

Query: 421 ETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKL 478
           ETRV LELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKL
Sbjct: 421 ETRVGLELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKL 389

[Close]

BLAST of Clc07G15420 vs. ExPASy TrEMBL
Match: A0A6J1CTU5 (Endonuclease III homolog OS=Momordica charantia OX=3673 GN=LOC111014717 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 5.2e-135
Identity = 293/488 (60.04%), Postives = 315/488 (64.55%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVP-PNPGISGVKSSNSVSESV 60
           MF  C I TP L I FARRITC  MSKGSLSSLPTSSN+ P  + GISGV+SSN VSES 
Sbjct: 1   MFLTCAITTPTLPIAFARRITCKSMSKGSLSSLPTSSNKFPQDHSGISGVRSSNGVSESE 60

Query: 61  TRVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFC 120
           TRVFVRRRVKKNAE QDSG +VEP VDAK    P                          
Sbjct: 61  TRVFVRRRVKKNAEVQDSGPQVEPNVDAKRCCPP-------------------------- 120

Query: 121 AAVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMS 180
                                                          + ++F F  TK S
Sbjct: 121 -----------------------------------------------DIEDFAFKRTKES 180

Query: 181 GLTWKSK-PPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ---- 240
             +WKSK PPLDPL+ GIE SNP RQK IAERGK                P  +W+    
Sbjct: 181 PGSWKSKPPPLDPLVTGIEVSNPIRQKGIAERGK----------------PPVNWEKILE 240

Query: 241 -FRSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRS 300
             R +  +   PV  TM           C      L PK+ + S+L  SL+  +T    +
Sbjct: 241 GIREMRSSEDAPV-DTMG----------CGQAASTLPPKERRFSVLASSLLSSQTKDHVT 300

Query: 301 AGAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPR 360
            GAA RLQE+GLLTADAMDKADEATIKSLIYPVGFYSTKA+NLKKIAKICL+KYGGDIPR
Sbjct: 301 HGAATRLQENGLLTADAMDKADEATIKSLIYPVGFYSTKARNLKKIAKICLIKYGGDIPR 360

Query: 361 SLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEE 420
           SLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRI NRLGWVSGKGSKQKTSTPEE
Sbjct: 361 SLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRISNRLGWVSGKGSKQKTSTPEE 388

Query: 421 TRVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLK 478
           TRVALELWLPKEEWVPIN LLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLK
Sbjct: 421 TRVALELWLPKEEWVPINTLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLK 388

[Close]

BLAST of Clc07G15420 vs. ExPASy TrEMBL
Match: A0A6J1CVP5 (Endonuclease III homolog OS=Momordica charantia OX=3673 GN=LOC111014717 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 1.3e-133
Identity = 291/487 (59.75%), Postives = 313/487 (64.27%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           MF  C I TP L I FARRITC  MSKGSLSSLPTSSN+ P +   SGV+SSN VSES T
Sbjct: 1   MFLTCAITTPTLPIAFARRITCKSMSKGSLSSLPTSSNKFPQDH--SGVRSSNGVSESET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRRRVKKNAE QDSG +VEP VDAK    P                           
Sbjct: 61  RVFVRRRVKKNAEVQDSGPQVEPNVDAKRCCPP--------------------------- 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         + ++F F  TK S 
Sbjct: 121 ----------------------------------------------DIEDFAFKRTKESP 180

Query: 181 LTWKSK-PPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ----- 240
            +WKSK PPLDPL+ GIE SNP RQK IAERGK                P  +W+     
Sbjct: 181 GSWKSKPPPLDPLVTGIEVSNPIRQKGIAERGK----------------PPVNWEKILEG 240

Query: 241 FRSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSA 300
            R +  +   PV  TM           C      L PK+ + S+L  SL+  +T    + 
Sbjct: 241 IREMRSSEDAPV-DTMG----------CGQAASTLPPKERRFSVLASSLLSSQTKDHVTH 300

Query: 301 GAALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRS 360
           GAA RLQE+GLLTADAMDKADEATIKSLIYPVGFYSTKA+NLKKIAKICL+KYGGDIPRS
Sbjct: 301 GAATRLQENGLLTADAMDKADEATIKSLIYPVGFYSTKARNLKKIAKICLIKYGGDIPRS 360

Query: 361 LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEET 420
           LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRI NRLGWVSGKGSKQKTSTPEET
Sbjct: 361 LEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRISNRLGWVSGKGSKQKTSTPEET 385

Query: 421 RVALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKG 478
           RVALELWLPKEEWVPIN LLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLK 
Sbjct: 421 RVALELWLPKEEWVPINTLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKR 385

[Close]

BLAST of Clc07G15420 vs. ExPASy TrEMBL
Match: A0A6J1IUE8 (Endonuclease III homolog OS=Cucurbita maxima OX=3661 GN=LOC111479404 PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 8.3e-133
Identity = 288/484 (59.50%), Postives = 313/484 (64.67%), Query Frame = 0


Query: 1   MFFACPIRTPALSITFARRITCSGMSKGSLSSLPTSSNEVPPNPGISGVKSSNSVSESVT 60
           MF ACPIR  ALSITFARRITC+GMSK S SS+P +SNE  P PGISGV+SSN VS+S T
Sbjct: 1   MFLACPIRNSALSITFARRITCTGMSKRSSSSMPITSNE--PLPGISGVQSSNGVSKSET 60

Query: 61  RVFVRRRVKKNAEGQDSGLEVEPKVDAKVRASPFSFSSSKHVFHPGKWVILALDGRFFCA 120
           RVFVRR VKK AEGQ SGL++E K D K                              C 
Sbjct: 61  RVFVRRTVKKKAEGQGSGLDLELKDDFK-----------------------------HCC 120

Query: 121 AVLLILKILHSKEQRIPLDQVGVAQLSSAIAIGSLEVSPRKHRSILNFDNFLF--TKMSG 180
                                                         N ++F F  TK S 
Sbjct: 121 P---------------------------------------------NIEDFAFKRTKDSP 180

Query: 181 LTWKSKPPLDPLLIGIEDSNPTRQKNIAERGKKIRCLGIFSSLKPNQRPRDSWQ-----F 240
            + KSKPPLD LL  IEDSNPTRQK +AE GK                P   W+      
Sbjct: 181 GSRKSKPPLDTLLTRIEDSNPTRQKGVAEGGK----------------PPVDWEKVLEGI 240

Query: 241 RSLAKTNITPVTSTMSLSSIFGGFPFCRAVRYLLFPKDIKLSLLLFSLIDKRT--FRSAG 300
           R +  + + PV  TM           C      L PK+ + ++L  SL+  +T    + G
Sbjct: 241 REMRSSEVAPV-DTMG----------CGRAGSTLPPKERRFAVLASSLLSSQTKDHVTHG 300

Query: 301 AALRLQESGLLTADAMDKADEATIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360
           AALRLQESGLLTADAMDKADE+TIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL
Sbjct: 301 AALRLQESGLLTADAMDKADESTIKSLIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSL 360

Query: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETR 420
           EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTS+PEETR
Sbjct: 361 EELLLLPGIGPKIAHLIMIMAWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSSPEETR 381

Query: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGS 476
           VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVS LCPSAF E+SSPSPKLK S
Sbjct: 421 VALELWLPKEEWVPINPLLVGFGQTICTPLRPKCGNCSVSHLCPSAFNEASSPSPKLKRS 381

[Close]

BLAST of Clc07G15420 vs. TAIR 10
Match: AT1G05900.2 (endonuclease III 2 )

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-80
Identity = 147/220 (66.82%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 260 CRAVRYLLFPKDIKLSLLLFSLIDKRTFRS-AGAAL-RLQESGLLTADAMDKADEATIKS 319
           C      L PK+ +  +L+ +L+  +T     GAA+ RL ++GLLT +A+DKADE+TIK 
Sbjct: 167 CDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKE 226

Query: 320 LIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQ 379
           LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR+LEELL LPG+GPKIAHL++ +AWNDVQ
Sbjct: 227 LIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQ 286

Query: 380 GICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTI 439
           GICVDTHVHRICNRLGWVS  G+KQKTS+PEETRVAL+ WLPK EWV IN LLVGFGQTI
Sbjct: 287 GICVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQTI 346

Query: 440 CTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTKTL 478
           CTPLRP CG CS++++CPSAFKE+ S S KLK S  +K L
Sbjct: 347 CTPLRPHCGTCSITEICPSAFKETPSTSSKLKKSIKSKKL 386

[Close]

BLAST of Clc07G15420 vs. TAIR 10
Match: AT2G31450.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 293.1 bits (749), Expect = 4.0e-79
Identity = 144/218 (66.06%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 260 CRAVRYLLFPKDIKLSLLLFSLIDKRTFRSAGAAL--RLQESGLLTADAMDKADEATIKS 319
           C      L P + + ++LL +L+  +T      A   RL ++GLLT +A+DKADE+TIK 
Sbjct: 160 CDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKE 219

Query: 320 LIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQ 379
           LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++LL LPGIGPK+AHLI+ +AWNDVQ
Sbjct: 220 LIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQ 279

Query: 380 GICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTI 439
           GICVDTHVHRICNRLGWVS  G+KQKT++PEETRVAL+ WLPKEEWV INPLLVGFGQ I
Sbjct: 280 GICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMI 339

Query: 440 CTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTK 476
           CTP+RP+C  CSVS LCP+AFKE+SSPS KLK S+ +K
Sbjct: 340 CTPIRPRCEACSVSKLCPAAFKETSSPSSKLKKSNRSK 377

[Close]

BLAST of Clc07G15420 vs. TAIR 10
Match: AT2G31450.2 (DNA glycosylase superfamily protein )

HSP 1 Score: 293.1 bits (749), Expect = 4.0e-79
Identity = 144/218 (66.06%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 260 CRAVRYLLFPKDIKLSLLLFSLIDKRTFRSAGAAL--RLQESGLLTADAMDKADEATIKS 319
           C      L P + + ++LL +L+  +T      A   RL ++GLLT +A+DKADE+TIK 
Sbjct: 158 CDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKE 217

Query: 320 LIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQ 379
           LIYPVGFY+ KA  +KKIA+ICL+KY GDIP SL++LL LPGIGPK+AHLI+ +AWNDVQ
Sbjct: 218 LIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQ 277

Query: 380 GICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTI 439
           GICVDTHVHRICNRLGWVS  G+KQKT++PEETRVAL+ WLPKEEWV INPLLVGFGQ I
Sbjct: 278 GICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMI 337

Query: 440 CTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSSTK 476
           CTP+RP+C  CSVS LCP+AFKE+SSPS KLK S+ +K
Sbjct: 338 CTPIRPRCEACSVSKLCPAAFKETSSPSSKLKKSNRSK 375

[Close]

BLAST of Clc07G15420 vs. TAIR 10
Match: AT1G05900.1 (endonuclease III 2 )

HSP 1 Score: 189.1 bits (479), Expect = 8.1e-48
Identity = 93/145 (64.14%), Postives = 116/145 (80.00%), Query Frame = 0


Query: 260 CRAVRYLLFPKDIKLSLLLFSLIDKRTFRS-AGAAL-RLQESGLLTADAMDKADEATIKS 319
           C      L PK+ +  +L+ +L+  +T     GAA+ RL ++GLLT +A+DKADE+TIK 
Sbjct: 167 CDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKE 226

Query: 320 LIYPVGFYSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQ 379
           LIYPVGFY+ KA N+KK+AKICLM+Y GDIPR+LEELL LPG+GPKIAHL++ +AWNDVQ
Sbjct: 227 LIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQ 286

Query: 380 GICVDTHVHRICNRLGWVSGKGSKQ 403
           GICVDTHVHRICNRLGWVS  G+KQ
Sbjct: 287 GICVDTHVHRICNRLGWVSKPGTKQ 311

[Close]

BLAST of Clc07G15420 vs. TAIR 10
Match: AT4G12740.1 (HhH-GPD base excision DNA repair family protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-05
Identity = 38/130 (29.23%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 325 YSTKAKNLKKIAKICLMKYGGDIPRSLEELLLLPGIGPKIAHLIMIMAWNDVQGICVDTH 384
           Y  +A+ L + AK+ +    G  P     L+ + GIG   A  I  +A+N+   + VD +
Sbjct: 232 YYRRARFLLEGAKMVVAGTEG-FPNQASSLMKVKGIGQYTAGAIASIAFNEAVPV-VDGN 291

Query: 385 VHRICNRLGWVSGKGSKQKTSTPEETRVALELWLPKEEWVPINPLLVGFGQTICTPLRPK 444
           V R+  RL  +S    K + +     ++A +L  P       N  L+  G T+CT  +P 
Sbjct: 292 VIRVLARLKAISA-NPKDRLTARNFWKLAAQLVDPSRPG-DFNQSLMELGATLCTVSKPS 351

Query: 445 CGNCSVSDLC 455
           C +C VS  C
Sbjct: 352 CSSCPVSSQC 357

The following BLAST results are available for this feature:

BLAST of Clc07G15420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878185.1	5.6e-168	70.16	endonuclease III homolog 2, chloroplastic-like isoform X1 [Benincasa hispida]	[more]
XP_038878187.1	9.9e-165	69.55	endonuclease III homolog 2, chloroplastic-like isoform X2 [Benincasa hispida]	[more]
XP_038878188.1	3.4e-149	64.61	endonuclease III homolog 2, chloroplastic-like isoform X3 [Benincasa hispida]	[more]
XP_038878189.1	4.6e-146	63.99	endonuclease III homolog 2, chloroplastic-like isoform X4 [Benincasa hispida]	[more]
XP_004152104.1	1.1e-142	62.14	endonuclease III homolog 1, chloroplastic [Cucumis sativus] >KGN53081.2 hypothet...	[more]

BLAST of Clc07G15420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DFZ0	2.3e-79	66.82	Endonuclease III homolog 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH...	[more]
Q9SIC4	5.6e-78	66.06	Endonuclease III homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NTH...	[more]
A7M7B9	2.3e-47	52.69	Endonuclease III-like protein 1 OS=Gallus gallus OX=9031 GN=NTHL1 PE=2 SV=1	[more]
P78549	7.4e-46	52.15	Endonuclease III-like protein 1 OS=Homo sapiens OX=9606 GN=NTHL1 PE=1 SV=2	[more]
Q2KID2	1.6e-45	51.61	Endonuclease III-like protein 1 OS=Bos taurus OX=9913 GN=NTHL1 PE=2 SV=1	[more]

BLAST of Clc07G15420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BX24	2.8e-141	61.52	Endonuclease III homolog OS=Cucumis melo OX=3656 GN=LOC103494544 PE=3 SV=1	[more]
A0A5A7TN21	2.4e-140	61.15	Endonuclease III homolog OS=Cucumis melo var. makuwa OX=1194695 GN=NTH1 PE=3 SV=...	[more]
A0A6J1CTU5	5.2e-135	60.04	Endonuclease III homolog OS=Momordica charantia OX=3673 GN=LOC111014717 PE=3 SV=...	[more]
A0A6J1CVP5	1.3e-133	59.75	Endonuclease III homolog OS=Momordica charantia OX=3673 GN=LOC111014717 PE=3 SV=...	[more]
A0A6J1IUE8	8.3e-133	59.50	Endonuclease III homolog OS=Cucurbita maxima OX=3661 GN=LOC111479404 PE=3 SV=1	[more]

BLAST of Clc07G15420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05900.2	1.6e-80	66.82	endonuclease III 2	[more]
AT2G31450.1	4.0e-79	66.06	DNA glycosylase superfamily protein	[more]
AT2G31450.2	4.0e-79	66.06	DNA glycosylase superfamily protein	[more]
AT1G05900.1	8.1e-48	64.14	endonuclease III 2	[more]
AT4G12740.1	1.3e-05	29.23	HhH-GPD base excision DNA repair family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003651	Endonuclease III-like, iron-sulphur cluster loop motif	SMART	SM00525	ccc3	coord: 437..457 e-value: 8.8E-6 score: 35.2
IPR003265	HhH-GPD domain	SMART	SM00478	endo3end	coord: 285..436 e-value: 8.8E-46 score: 168.1
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 300..404 e-value: 3.3E-16 score: 60.5
IPR003265	HhH-GPD domain	CDD	cd00056	ENDO3c	coord: 277..434 e-value: 3.02402E-43 score: 148.159
IPR000445	Helix-hairpin-helix motif	PFAM	PF00633	HHH	coord: 342..369 e-value: 5.8E-8 score: 32.2
IPR023170	Helix-hairpin-helix, base-excision DNA repair, C-terminal	GENE3D	1.10.1670.10		coord: 371..460 e-value: 1.5E-25 score: 91.0
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 275..370 e-value: 9.2E-22 score: 79.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..477
None	No IPR available	PANTHER	PTHR43286	ENDONUCLEASE III-LIKE PROTEIN 1	coord: 291..471
None	No IPR available	PANTHER	PTHR43286:SF3	ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC	coord: 291..471
IPR004036	Endonuclease III-like, conserved site-2	PROSITE	PS01155	ENDONUCLEASE_III_2	coord: 345..374
IPR004035	Endonuclease III, iron-sulphur binding site	PROSITE	PS00764	ENDONUCLEASE_III_1	coord: 438..454
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 292..466

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G15420.2	Clc07G15420.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0140097	catalytic activity, acting on DNA
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds
molecular_function	GO:0003824	catalytic activity