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Clc07G13540 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTCCATTGATATTTCCAATGTGAGACATGCCCCTCCAATGCGTGATCCTCAACAGTTGCTAACTGATTTTAAGGTAGAATCTGTGTTATCGAATAAAAAGGAGGAGTATCATCTTTGATCACATTGAATCTTCTTAACTAATCACAATAAATAAAGTAATTTGTACTATAAAAGGGACCAACAAAATCTTCATCACTACAAATTTGGCAATGCACATGTTTTCTTATTTTATCTCATACTAGTTGTCTTTGAAGTTATTATACAAATCTCAACGTTGTCTCTAATTTCTCAACATGACTCTCTTTTTGTGTATTAAACTCAAACAACGTATTAAGTTATTAACACACAATCAACTACTAACATACAATCTTGTCAAAACATTTAAGTCTTAGGTCACTCGATGATTTTATTATTCTTTTACCTCATCCTATAGTCTATATACCTTATTTGAAGGTTCCATAACAAGAGGAAGAGAATCCAGAGACGGGGAAAAGGAAGAAGGGGAATAAGAGGTATTGAAGAAAATGAGAGAAAATAGAGGGAGAATTGAGAAGTGTTAGGTCATTCATTAAACTAGAGGCGTAAGAGAACACATAAAAAAGTTTTATTTATTTATTTATTTTTAAAAATTTTAAGGGTAAGGATATTAATACAACTTTTGAAGTTTATAGGTATTTTTGCAACTAGGTATTAACTATATATTTTTTTTTTGCATAAAGAGTAAGACTATTTTTTTTTTAATGGTTTAAGTTAAGAATATTGTTTGAAAATTTTAAAAGTTCAAAGGGGTTTTTTTTGAAACAAAGTACTGATGGGTTTTTTGTTCAAAAACTATCTCTAGTAATTTTAAAATGTTTGTTTAAATTTTTTAAAGTTTAAAGAGTATTTTTTTAAGTTTTGAAACTCAAAAATATTGTTAACACATCATACAAACTTCAAAGATACATTATATATTTATAATTTAGCATTTGTTAAACCAAAAAAAGTTTGTTTTTCTAAAAAAAAAAAAAAAACTCCTCATATTTGACGAAGAGGTGTCATCTGATTCGTATTCGCGAATCACAACCCTTTGGAAAAAAGAACGTACAATAAAATAAAGAGTAATATTTGGGTGCAACACATTGCACCGTATTTTCTTACTTTCCTCTCAATCACAATGATAGAAAAAGAAAAAAAAAATCATGACAATTTGTAATTGAATACTTCATAGTTGCACAAAGACAGATGCAGTCCAAGAAGCTGTCAAATATTTTTTCAATAATAAAGTTTATTATTTCTAAATAATAATAATAATTAAACAAATAAAGCTTGGATGAATAAGACTCCTGAGACTATAAGATTGTCTCTTACTATTATTATTTTTCTAAAAGATAATAGTAGTTAAAGCTAAAAGACACATTACCTACATGAATTATTAAAAAGAAGAGTGAATGTATATAAAAGAAATATAAATAATTATAAAATGCAAAATAAGGAAGGGTGATATAAAAACAAAACAGTAAAAAGATAAAAAGGCAAACCCATCTTTCAAAGGGTATTTTAAATTTCGAGATGCCTTCTGTAAAAAGAATAATGGGTTGTCTAAGAATTTTCAAATACTAGAAAATCTAACATTATCATACAATAAACATAATAATTTAGATGTCAACTTTATGAAAATTTTGGATCCTCGCGAAGCAAGCTAACCCGTAAGTACATTTTTAATATATTTAAAACTGTTTTAGGTTACATGATACATGTGTGTTTTAATATCTTATATGTACATTATTGAGTAAATTCCCAGCCGAAGCCCGGCCCGAGAGTTAGGTCCATATAACTAGTGTTTAGAATAGACCGAATCGAACCGAGCGGTTCAACCGGAAGTTCGAATCACTTCTACACCTAGCCTGCCACAATTCTATTTACCTCCATTTTCTACTTCTCGCTCTCCGTCTCCTCTCACTTCCAATCGGCAGTCGCTCGAACCTTTCGCCGGCGACGGTGATATTATCTCCTTGCCGCCGCCAACAACCTGCCGGGAACCGCGCCACTTTCGGCCGTACGTCGCCTTGCTCTCATCTCCGCCCGACAGTCGCCTCCACCCTCGTCGGGGCTAAAGTTAAGGTAAATGTAAATCCAAAATCGGTTGAAACCGAAGCCGAGAAATCCTCGGTTTTATTGGTTAACAAGTCTTGAGAATTAAGGGGGTTCGATTCGTTTATGGCATTCGGTCAAAACCAGAGCGAATTGAGCCGTGCAGACCCCTAGCTGCCACCTAGCGTGCGGAGAAAAAGAAATAAACGAAAAGTCGCAGAAAAACAAAATGCCTCAACGTGAATTGAGCTGAATGGAACGGAGTCAGAGATCTACTACTGAACCCTAATAAGCTTACCCATTATTCCAATTCTCATTTCCTTTGTAACGTGTTGTTCATCATCTCAGCTGCAGATCGATCTCCATTTGTTCTTGGACGATCCAGTTTTGCGCCAGACAATATGGCTTACGCATCGCAAATTATCAACCATTCTAAAAAGGTGAGGTTCAATTCGAATATCACATCACTTCAGTACTCTGTGACTTATTGATTCATCTGTTTCCAATTTGATTTTGGAATTACTCTCTGAATCATTCTGGGTGTAAGCTTCGTTATGTGTGTCATATGCATGTTGCACAAATAGGAGCGCATATATTTTGTTGTTGTGGTCTTTCAAATTTGTTTAGACTCTTTACGGTATTCCTCACAAAATTAGCTGCTATGTCGAATGGGATAGTTAAGCTAATATTTATTCATGGACACTTTAATTTTCTAATGGGCATTTCATTTGAATTGTACTTTTGATTTTTTACGGTTCTTTATGGTTATTTTATTTTCTCTCTTCATTTTCCCCCATGCTATTGAACTTTGCTGATTCTCCTTGTTCCACGAATAAGCTTTTTGGGTGGGTGTTTGTGTATTTGTTTTTCGTTTCTTTTGGCGTGGGGTGTTGGGGGGAATTGGCTATATTAGGCTCAACCCTTCATGCTGGATCTCAGTTGTAGCTGGAGAAAGGTTCCTTTTATCTGTTATTGTGGATTTGAATAGTTGCTCATGCTCATTGACTGCCGCGTAATTTTTGTTGCATTGCCTGATTTATATTTGACTGGTAGTCTTCAACTTGGATACACTGATTTATTATCACAGGTTCATAATTGAACTCTCACTTGCTAATTTAAGCCAACAAATTATATCATGTCCATCATACAAAGCCATGGAAGAGGTTTGTTGTTGATAGGACATTGCATACTGACAGGGCGTTGGATGCTCATTAAACTAAAACGTTGCATCATTTGTTTCTCTTCAATGCTTAAATTGTACCTGCCAATGTTTCTATTAGGAATTATCTTATTCTTCTCACGTATCTGCATTTATTCTTGATTCTTTATATGTATTTTTTTAATTTCCCGTGATTCACATTAATCTTCTTGAAGCTGTTTCTACTTACAAGGCGTTCACAAATTTTCCTGGTTTTAATCAGAACATTTATCCATTCATGTTATTCTTGCAGTTAAGAAGTGCTCCAAAGTTACTTCGGCAAGCTAGCGTGGTTCGCTGGTTTTCAGAGGACGTGCAGTCCTCTATTGTTAAGGACGATGGTAAGCAGTTTGTAATCAAGAACTCTGAACCAAGAAAACCTGCTTGGTCATGTACTTTTGGTATTTATTTTCTGTCCTCTAATGTTCTTGATTGTACATCTGAAGTGTTAGACCTCTGCTTAGTTACTTTGGTACTCATTTGATGTAATTAATCAGAAATAATAGTCTTGTTTTGTTGGTCAGTTTAATGAATTATATGCTTGTTTATTTTGCATATTATATAAACTGTTATTACGTGAGTGCTTCCAACAGCTAACTCTTGAAGTTACCCTAACAAAGGTGGTTGTTACACAGAAATCTGGAAGATCCAGGGTCATGGTTACCAAGCTTCGGAAAAAAGGGAAATCAAGAACCTTGGCCAATTTTAA ATGAGGTCCATTGATATTTCCAATGTGAGACATGCCCCTCCAATGCGTGATCCTCAACAGTTGCTAACTGATTTTAAGAATAGACCGAATCGAACCGAGCGGTTCAACCGGAAGTTCGAATCACTTCTACACCTAGCCTGCCACAATTCTATTTACCTCCATTTTCTACTTCTCGCTCTCCGTCTCCTCTCACTTCCAATCGGCAGTCGCTCGAACCTTTCGCCGGCGACGGTGATATTATCTCCTTGCCGCCGCCAACAACCTGCCGGGAACCGCGCCACTTTCGGCCGTACGTCGCCTTGCTCTCATCTCCGCCCGACAGTCGCCTCCACCCTCGTCGGGGCTAAAGTTAAGGTAAATGTAAATCCAAAATCGGTTGAAACCGAAGCCGAGAAATCCTCGGTTTTATTGGTTAACAAAGATCTACTACTGAACCCTAATAAGCTTACCCATTATTCCAATTCTCATTTCCTTTGTAACGTGTTGTTCATCATCTCAGCTGCAGATCGATCTCCATTTGTTCTTGGACGATCCAGTTTTGCGCCAGACAATATGGCTTACGCATCGCAAATTATCAACCATTCTAAAAAGTTAAGAAGTGCTCCAAAGTTACTTCGGCAAGCTAGCGTGGTTCGCTGGTTTTCAGAGGACGTGCAGTCCTCTATTGTTAAGGACGATGAAATCTGGAAGATCCAGGGTCATGGTTACCAAGCTTCGGAAAAAAGGGAAATCAAGAACCTTGGCCAATTTTAA ATGAGGTCCATTGATATTTCCAATGTGAGACATGCCCCTCCAATGCGTGATCCTCAACAGTTGCTAACTGATTTTAAGAATAGACCGAATCGAACCGAGCGGTTCAACCGGAAGTTCGAATCACTTCTACACCTAGCCTGCCACAATTCTATTTACCTCCATTTTCTACTTCTCGCTCTCCGTCTCCTCTCACTTCCAATCGGCAGTCGCTCGAACCTTTCGCCGGCGACGGTGATATTATCTCCTTGCCGCCGCCAACAACCTGCCGGGAACCGCGCCACTTTCGGCCGTACGTCGCCTTGCTCTCATCTCCGCCCGACAGTCGCCTCCACCCTCGTCGGGGCTAAAGTTAAGGTAAATGTAAATCCAAAATCGGTTGAAACCGAAGCCGAGAAATCCTCGGTTTTATTGGTTAACAAAGATCTACTACTGAACCCTAATAAGCTTACCCATTATTCCAATTCTCATTTCCTTTGTAACGTGTTGTTCATCATCTCAGCTGCAGATCGATCTCCATTTGTTCTTGGACGATCCAGTTTTGCGCCAGACAATATGGCTTACGCATCGCAAATTATCAACCATTCTAAAAAGTTAAGAAGTGCTCCAAAGTTACTTCGGCAAGCTAGCGTGGTTCGCTGGTTTTCAGAGGACGTGCAGTCCTCTATTGTTAAGGACGATGAAATCTGGAAGATCCAGGGTCATGGTTACCAAGCTTCGGAAAAAAGGGAAATCAAGAACCTTGGCCAATTTTAA MRSIDISNVRHAPPMRDPQQLLTDFKNRPNRTERFNRKFESLLHLACHNSIYLHFLLLALRLLSLPIGSRSNLSPATVILSPCRRQQPAGNRATFGRTSPCSHLRPTVASTLVGAKVKVNVNPKSVETEAEKSSVLLVNKDLLLNPNKLTHYSNSHFLCNVLFIISAADRSPFVLGRSSFAPDNMAYASQIINHSKKLRSAPKLLRQASVVRWFSEDVQSSIVKDDEIWKIQGHGYQASEKREIKNLGQF Homology
BLAST of Clc07G13540 vs. NCBI nr
Match: XP_038904277.1 (dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Benincasa hispida] >XP_038904281.1 dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Benincasa hispida] >XP_038904287.1 dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial [Benincasa hispida]) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-21 Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of Clc07G13540 vs. NCBI nr
Match: XP_004146813.1 (dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 4.6e-20 Identity = 55/66 (83.33%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. NCBI nr
Match: XP_023525820.1 (dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-19 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. NCBI nr
Match: KAG7036425.1 (Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-19 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. NCBI nr
Match: XP_022949243.1 (dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-19 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. ExPASy TrEMBL
Match: A0A0A0LFR2 (Acetyltransferase component of pyruvate dehydrogenase complex OS=Cucumis sativus OX=3659 GN=Csa_3G848140 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-20 Identity = 55/66 (83.33%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. ExPASy TrEMBL
Match: A0A6J1GBH0 (Acetyltransferase component of pyruvate dehydrogenase complex OS=Cucurbita moschata OX=3662 GN=LOC111452654 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.0e-20 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. ExPASy TrEMBL
Match: A0A6J1GBH3 (Acetyltransferase component of pyruvate dehydrogenase complex OS=Cucurbita moschata OX=3662 GN=LOC111452654 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.0e-20 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Clc07G13540 vs. ExPASy TrEMBL
Match: A0A6J1DF86 (Acetyltransferase component of pyruvate dehydrogenase complex OS=Momordica charantia OX=3673 GN=LOC111020275 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19 Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of Clc07G13540 vs. ExPASy TrEMBL
Match: A0A6J1GV94 (Acetyltransferase component of pyruvate dehydrogenase complex OS=Cucurbita moschata OX=3662 GN=LOC111457738 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.2e-19 Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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