Clc07G13480 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G13480
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	nucleolin 1
Location	ClcChr07: 28296829 .. 28298215 (-)
RNA-Seq Expression	Clc07G13480
Synteny	Clc07G13480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATAGAACGTTTCCGAAATTTCAGCTTTCAAATACTTCGAAGCGGCATTTGATGGAGATCGCCGGCGAAGACGGTTCAAAGTTAGTTGTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCCAAGCTAAAACCTCAGATAACAGTGATGGAGCTTCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCAGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTCAAATTAAACAAAATCGCTGAATTCGAAGAAGGGGAGCAAATTCTTTCGCATTCTTCTGATTCGGAGGATATCGATGTTTCTGGCATTGACCCTGTCAAAGGTTTGCTTCCGAAAACCTATATAATTTCCCGATAAAATTTAAGAGGAAAGCAATCAAGATCATCCCTTTTTCAGATTGTTGGTGAATTACGCCTAGGGTTTTGGTATCGCAATGTAAAAATAACTGATACTACAAAGAAAACAAACGATAAAATTGTTTTGATAAGTTCTAAATTGTAAATCGATGATACTGATTGTTCTTTCCCTTGTCAGAATTTGGTTTTCTTGTAATGGGACTCGAATTTGAATCCTGTCAAATGTATGATCTCGAAAATCTTTCTGGTTTTCCCGAGAAATTTTAGAGAAAAATAATTGGAATCTTCACTTTGCCAGATAGTTTACATATCCTGCGTAGGATTTTAATAAAATTAGCAGATACTTAAGAGAACAAACGACAAAATTGTTTTAGAAGTTCCAAATTGTGAATGGATGATACTGATTGTTCTTACTGTTCCCTTGTCAGAATTCGGTTTTCTTGTTGTGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGCCGAGAAAAGACAGTGATGATGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGCAAGGGGAAAGAGGAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGATTACAAAAACAAAGAACTTTCGGAGACCCAAATACTCAACAAGATCAAAAGATGGCAATAAGACTCACAAGGATCGAAGGAAGGCTGCTAAATCTAATAAAGACTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGGAGTAGATAATGTAGAACATATGGACGAAGATGAAGAAGAAGAAGAATTTTCAGATGATGATGAGGACGATTGA

mRNA sequence

CAAAAATAGAACGTTTCCGAAATTTCAGCTTTCAAATACTTCGAAGCGGCATTTGATGGAGATCGCCGGCGAAGACGGTTCAAAGTTAGTTGTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCCAAGCTAAAACCTCAGATAACAGTGATGGAGCTTCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCAGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTCAAATTAAACAAAATCGCTGAATTCGAAGAAGGGGAGCAAATTCTTTCGCATTCTTCTGATTCGGAGGATATCGATGTTTCTGGCATTGACCCTGTCAAAGAAGTTCCAAATTGTGAATGGATGATACTGATTGTTCTTACTGTTCCCTTGTCAGAATTCGGTTTTCTTGTTGTGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGCCGAGAAAAGACAGTGATGATGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGCAAGGGGAAAGAGGAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGATTACAAAAACAAAGAACTTTCGGAGACCCAAATACTCAACAAGATCAAAAGATGGCAATAAGACTCACAAGGATCGAAGGAAGGCTGCTAAATCTAATAAAGACTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGGAGTAGATAATGTAGAACATATGGACGAAGATGAAGAAGAAGAAGAATTTTCAGATGATGATGAGGACGATTGA

Coding sequence (CDS)

ATGGAGATCGCCGGCGAAGACGGTTCAAAGTTAGTTGTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCCAAGCTAAAACCTCAGATAACAGTGATGGAGCTTCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCAGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTCAAATTAAACAAAATCGCTGAATTCGAAGAAGGGGAGCAAATTCTTTCGCATTCTTCTGATTCGGAGGATATCGATGTTTCTGGCATTGACCCTGTCAAAGAAGTTCCAAATTGTGAATGGATGATACTGATTGTTCTTACTGTTCCCTTGTCAGAATTCGGTTTTCTTGTTGTGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGCCGAGAAAAGACAGTGATGATGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGCAAGGGGAAAGAGGAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGATTACAAAAACAAAGAACTTTCGGAGACCCAAATACTCAACAAGATCAAAAGATGGCAATAAGACTCACAAGGATCGAAGGAAGGCTGCTAAATCTAATAAAGACTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGGAGTAGATAATGTAGAACATATGGACGAAGATGAAGAAGAAGAAGAATTTTCAGATGATGATGAGGACGATTGA

Protein sequence

MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILSHSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEFSDDDEDD

Homology

[Close]

BLAST of Clc07G13480 vs. NCBI nr
Match: KAG7018280.1 (hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.2 bits (1219), Expect = 8.7e-130
Identity = 247/307 (80.46%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVTIFGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE +WF+LNKI EFEEGE+I S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKICS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
             SDSEDIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKW
Sbjct: 121 RCSDSEDIDVSGIDPVK------------------EFGFLAKGHEFECYGNRVIRDAKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDE RKDSDDDEDYGRK+K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP
Sbjct: 181 DWFLDERRKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF 300
           KYSTRSKD NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Sbjct: 241 KYSTRSKDSNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEF 289

Query: 301 SDDDEDD 308
           SDD+EDD
Sbjct: 301 SDDEEDD 289

[Close]

BLAST of Clc07G13480 vs. NCBI nr
Match: XP_022980683.1 (protein BFR2 [Cucurbita maxima])

HSP 1 Score: 473.8 bits (1218), Expect = 1.1e-129
Identity = 247/307 (80.46%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVTIFGRGSGFA KDRT+SR HILI+AKTS+NS+G  MEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+I S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS+DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKW
Sbjct: 121 RSSDSDDIDVSGIDPVK------------------EFGFLAKGHEFECYGNRVIRDAKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDE RKDSDD+EDYGRK+K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP
Sbjct: 181 DWFLDERRKDSDDEEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF 300
           KYSTRSKD NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Sbjct: 241 KYSTRSKDRNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEF 289

Query: 301 SDDDEDD 308
           SDD EDD
Sbjct: 301 SDDKEDD 289

[Close]

BLAST of Clc07G13480 vs. NCBI nr
Match: XP_038898830.1 (protein PIF [Benincasa hispida])

HSP 1 Score: 473.4 bits (1217), Expect = 1.5e-129
Identity = 253/314 (80.57%), Postives = 270/314 (85.99%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVTIFGRGSGFASKDRT+SRRHILI+AKTS+NS+GA +EP VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTVSRRHILIEAKTSENSNGAPIEPTVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIGRNPIWV+SSKNGEIRTFRRSEKG+MA GESFCVG QEPIWF+LNKIAEFEE +Q  S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGEMALGESFCVGSQEPIWFELNKIAEFEERKQFFS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS DIDVSGIDPVK                  EFGFL +GHEFECYGNRVIRD KKW
Sbjct: 121 RSSDSVDIDVSGIDPVK------------------EFGFLAMGHEFECYGNRVIRDPKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDEPRKDSDDDEDYGRKKKRG +GKRKKGANSDDEDWTDENEDAVEMITKTK FRRP
Sbjct: 181 DWFLDEPRKDSDDDEDYGRKKKRGVKGKRKKGANSDDEDWTDENEDAVEMITKTKKFRRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHM----DE 300
           KYSTRSKD +KT  D++KAA+SNKDYD   EEDEDDETLGGFIVDD  DNVE M    DE
Sbjct: 241 KYSTRSKDRHKTPNDQKKAARSNKDYDEEVEEDEDDETLGGFIVDDEEDNVEQMDEDEDE 296

Query: 301 DEEEEEFSDDDEDD 308
           DEEEEEFSDDDE+D
Sbjct: 301 DEEEEEFSDDDEED 296

[Close]

BLAST of Clc07G13480 vs. NCBI nr
Match: XP_023526483.1 (protein BFR2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.5 bits (1212), Expect = 5.7e-129
Identity = 246/307 (80.13%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV REPVTIFGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFE
Sbjct: 1   MEIAGEDGSKLVPREPVTIFGRGSGFACKDRTVSRRHILIEAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE +WF+LNKI EFEEGE+I S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRCSEKGEMVPGESFCMGGQELMWFELNKIGEFEEGEKICS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDSEDIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKW
Sbjct: 121 RSSDSEDIDVSGIDPVK------------------EFGFLAKGHEFECYGNRVIRDAKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDEPRKDSDDDEDYGRK+K   RGKRKKGAN+DDEDWTDENEDAV MITKTK F+RP
Sbjct: 181 DWFLDEPRKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVGMITKTKKFQRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF 300
           KYSTRSKD NKTHKD++KAAKS+KDY EEDEDDETLGGFIVDD VDN E M+EDE+EEEF
Sbjct: 241 KYSTRSKDSNKTHKDQKKAAKSSKDYVEEDEDDETLGGFIVDDEVDNEELMNEDEDEEEF 289

Query: 301 SDDDEDD 308
           SDD+EDD
Sbjct: 301 SDDEEDD 289

[Close]

BLAST of Clc07G13480 vs. NCBI nr
Match: XP_022955501.1 (uncharacterized protein LOC111457508 [Cucurbita moschata])

HSP 1 Score: 471.5 bits (1212), Expect = 5.7e-129
Identity = 245/307 (79.80%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVT FGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+I S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS+DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKW
Sbjct: 121 RSSDSDDIDVSGIDPVK------------------EFGFLAKGHEFECYGNRVIRDAKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDE RKDSDDDEDYGRK+K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP
Sbjct: 181 DWFLDEWRKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF 300
           +YSTRS D NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Sbjct: 241 QYSTRSNDSNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEF 289

Query: 301 SDDDEDD 308
           SD +EDD
Sbjct: 301 SDGEEDD 289

[Close]

BLAST of Clc07G13480 vs. ExPASy TrEMBL
Match: A0A6J1J012 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 5.5e-130
Identity = 247/307 (80.46%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVTIFGRGSGFA KDRT+SR HILI+AKTS+NS+G  MEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFACKDRTVSRCHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+I S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS+DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKW
Sbjct: 121 RSSDSDDIDVSGIDPVK------------------EFGFLAKGHEFECYGNRVIRDAKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDE RKDSDD+EDYGRK+K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP
Sbjct: 181 DWFLDERRKDSDDEEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF 300
           KYSTRSKD NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Sbjct: 241 KYSTRSKDRNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEF 289

Query: 301 SDDDEDD 308
           SDD EDD
Sbjct: 301 SDDKEDD 289

[Close]

BLAST of Clc07G13480 vs. ExPASy TrEMBL
Match: A0A6J1GTX9 (uncharacterized protein LOC111457508 OS=Cucurbita moschata OX=3662 GN=LOC111457508 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.7e-129
Identity = 245/307 (79.80%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVT FGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTTFGRGSGFACKDRTVSRRHILIKAKTSENSNGVPMEPRVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQEP+WF+LNKIAEFEEGE+I S
Sbjct: 61  VIGKNPIWVRSGKNGEIRTFRSSEKGEMVPGESFCMGGQEPMWFQLNKIAEFEEGEKICS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS+DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKW
Sbjct: 121 RSSDSDDIDVSGIDPVK------------------EFGFLAKGHEFECYGNRVIRDAKKW 180

Query: 181 DWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRP 240
           DWFLDE RKDSDDDEDYGRK+K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP
Sbjct: 181 DWFLDEWRKDSDDDEDYGRKQKSRVRGKRKKGANNDDEDWTDENEDAVEMITKTKKFQRP 240

Query: 241 KYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF 300
           +YSTRS D NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Sbjct: 241 QYSTRSNDSNKTHKDQKKAAKSNKDYVEEDEDDETLGGFIVDDEVDNEELMDEDEDEEEF 289

Query: 301 SDDDEDD 308
           SD +EDD
Sbjct: 301 SDGEEDD 289

[Close]

BLAST of Clc07G13480 vs. ExPASy TrEMBL
Match: A0A6J1DEJ6 (protein bfr2 OS=Momordica charantia OX=3673 GN=LOC111020320 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 6.7e-128
Identity = 248/318 (77.99%), Postives = 268/318 (84.28%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLVV EPVTIFGRGSGFASKDRT+SRRH+LI+AKTS+N DGA +EP +SFE
Sbjct: 1   MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQI-- 120
           VIGRNPIWV+S KNGEIRTFRRSEKG++APGESFCVGGQEP WFKLNKIAE EEG++I  
Sbjct: 61  VIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQEPTWFKLNKIAEIEEGKRIVP 120

Query: 121 ---------LSHSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECY 180
                    L+ SSDSEDIDVSGIDPVK                  EFGFLV+GHEFECY
Sbjct: 121 KTEDQFAERLTRSSDSEDIDVSGIDPVK------------------EFGFLVMGHEFECY 180

Query: 181 GNRVIRDAKKWDWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVE 240
           GNRVIRDAKKWDWFLDEPRK SDDDEDYGR+K+RG RGKRKKGANSDDEDWTDENEDAVE
Sbjct: 181 GNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDAVE 240

Query: 241 MITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVE 300
           MI K K  +RPKYSTRSKD NKT+KD+ KAA SNKDYDEEDEDDETLGGFIVDD VDN E
Sbjct: 241 MIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEE 299

Query: 301 HMDEDEEEEEFSDDDEDD 308
            MDED EEEEFSDDD++D
Sbjct: 301 QMDED-EEEEFSDDDDED 299

[Close]

BLAST of Clc07G13480 vs. ExPASy TrEMBL
Match: A0A5D3BXV5 (Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 248/311 (79.74%), Postives = 267/311 (85.85%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVTIFGRGSGFASKDRTISRRHILI+AKTSDN++GA MEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIGRNPIWV+SSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWF+LNKI EFEEG+ + S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS+DIDVSGIDPVK                  EFGFLV+GHEFECYGNRVIRD KKW
Sbjct: 121 RSSDSDDIDVSGIDPVK------------------EFGFLVMGHEFECYGNRVIRDVKKW 180

Query: 181 DWFLDEPRKDS-DDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRR 240
           DWFLD P KDS DDDEDY RKKKRG RGKRKKGANSDDEDWTDENEDAV+MITK +  +R
Sbjct: 181 DWFLDGPSKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQR 240

Query: 241 PKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHMDEDEE 300
           PKYSTRSKD NK   D+RKAAKSNKDYD   EEDEDDETLGGFIVDD VDNVE MDEDEE
Sbjct: 241 PKYSTRSKDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEE 293

Query: 301 EEEFSDDDEDD 308
           EE   D+D+++
Sbjct: 301 EEFLDDEDDEE 293

[Close]

BLAST of Clc07G13480 vs. ExPASy TrEMBL
Match: A0A1S3BHB4 (nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 248/311 (79.74%), Postives = 267/311 (85.85%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFE 60
           MEIAGEDGSKLV+REPVTIFGRGSGFASKDRTISRRHILI+AKTSDN++GA MEP+VSFE
Sbjct: 1   MEIAGEDGSKLVLREPVTIFGRGSGFASKDRTISRRHILIEAKTSDNTNGAPMEPKVSFE 60

Query: 61  VIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQILS 120
           VIGRNPIWV+SSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWF+LNKI EFEEG+ + S
Sbjct: 61  VIGRNPIWVRSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFELNKITEFEEGKLVSS 120

Query: 121 HSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKW 180
            SSDS+DIDVSGIDPVK                  EFGFLV+GHEFECYGNRVIRD KKW
Sbjct: 121 RSSDSDDIDVSGIDPVK------------------EFGFLVMGHEFECYGNRVIRDVKKW 180

Query: 181 DWFLDEPRKDS-DDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRR 240
           DWFLD P KDS DDDEDY RKKKRG RGKRKKGANSDDEDWTDENEDAV+MITK +  +R
Sbjct: 181 DWFLDGPSKDSHDDDEDYERKKKRGVRGKRKKGANSDDEDWTDENEDAVQMITKVQKSQR 240

Query: 241 PKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHMDEDEE 300
           PKYSTRSKD NK   D+RKAAKSNKDYD   EEDEDDETLGGFIVDD VDNVE MDEDEE
Sbjct: 241 PKYSTRSKDRNKISNDQRKAAKSNKDYDGEVEEDEDDETLGGFIVDDEVDNVEQMDEDEE 293

Query: 301 EEEFSDDDEDD 308
           EE   D+D+++
Sbjct: 301 EEFLDDEDDEE 293

[Close]

BLAST of Clc07G13480 vs. TAIR 10
Match: AT3G13780.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51
Identity = 129/320 (40.31%), Postives = 194/320 (60.62%), Query Frame = 0


Query: 1   MEIAGEDGSKLVVREPV-TIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSF 60
           MEI GEDG+KL ++  V  +FGRG+GF ++D T+SRRH+ +  K +  + G      VSF
Sbjct: 14  MEIEGEDGTKLFLKTGVKDVFGRGAGFNTEDLTVSRRHVSLVFKPA--AAGTEPSDMVSF 73

Query: 61  EVIGRNPIWVQSSKNG-EIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIAEFEEGEQI 120
           EV+GRNP+W+++ + G +I+T R+ E G++A G+ FCV G  PIWF L +  E  E E+ 
Sbjct: 74  EVLGRNPVWIRAVEKGKKIQTLRKPETGEIATGDQFCVSGNHPIWFTLKRRDEVME-ERA 133

Query: 121 LSHSSDSEDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAK 180
           L H     +I+++ IDPVK                  EFGFLV+G EF+ Y    +RD K
Sbjct: 134 LDHG----EIELN-IDPVK------------------EFGFLVIGKEFDQYPKSRVRDIK 193

Query: 181 KWDWFL-DEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNF 240
           +W+WFL D    +SD DED  +K ++G   KR++   ++D+DW+ E+++  E++ K+K  
Sbjct: 194 QWEWFLEDSTNGNSDGDEDGDKKGRKGLGKKRRRKKGNEDDDWSVESDEDKELMVKSKRV 253

Query: 241 RRPKYSTRSKDGNKTHKDRRKAAKSNK----------DYDEEDEDDETLGGFIVDDGVDN 300
             P YSTRSK   KT KD   ++ S+           D +EED+DDETLGGFIV D    
Sbjct: 254 VTPTYSTRSK---KTKKDSNASSSSSNGAQTKQRGRADVEEEDDDDETLGGFIVSDEEAK 304

Query: 301 VEHMDEDEEEEEFSDDDEDD 308
           +E  +E+E+E +  D++++D
Sbjct: 314 LEEEEEEEDESDVDDEEDED 304

The following BLAST results are available for this feature:

BLAST of Clc07G13480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018280.1	8.7e-130	80.46	hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022980683.1	1.1e-129	80.46	protein BFR2 [Cucurbita maxima]	[more]
XP_038898830.1	1.5e-129	80.57	protein PIF [Benincasa hispida]	[more]
XP_023526483.1	5.7e-129	80.13	protein BFR2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955501.1	5.7e-129	79.80	uncharacterized protein LOC111457508 [Cucurbita moschata]	[more]

BLAST of Clc07G13480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc07G13480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J012	5.5e-130	80.46	protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111479979 PE=4 SV=1	[more]
A0A6J1GTX9	2.7e-129	79.80	uncharacterized protein LOC111457508 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A6J1DEJ6	6.7e-128	77.99	protein bfr2 OS=Momordica charantia OX=3673 GN=LOC111020320 PE=4 SV=1	[more]
A0A5D3BXV5	1.5e-127	79.74	Nucleolin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00290 PE...	[more]
A0A1S3BHB4	1.5e-127	79.74	nucleolin 1 OS=Cucumis melo OX=3656 GN=LOC103490042 PE=4 SV=1	[more]

BLAST of Clc07G13480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13780.1	6.6e-51	40.31	SMAD/FHA domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.200.20		coord: 3..110 e-value: 2.0E-12 score: 48.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..265
None	No IPR available	PANTHER	PTHR37733	SMAD/FHA DOMAIN-CONTAINING PROTEIN	coord: 1..307
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 7..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G13480.2	Clc07G13480.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding