Clc07G13420 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G13420
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Location	ClcChr07: 28236341 .. 28237928 (+)
RNA-Seq Expression	Clc07G13420
Synteny	Clc07G13420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATAATTTTCATTTCATTTCCCTAAATATTCCGAAAAGAAAAAGAAAAAAATAATCTTTCAGAAACTCTTTCGTGGAAATATTATCTGTAGTTTGACCATCTTCTGGGCTGTAGTTTGTATGCCCCACGAATATTATCCAAAAACTCAGCAATGTCTTCCTCCATTCTTTCTCATGCCACTGGAAACTCCATTATCACTACCAATTTCAAATCTCGAATCCTCTCGATTCACTTTCCGCCCGACAAATCCTTCCGCCCGACGCCCTTCTACACTAATGCTCTCTCCAATTCCCGCTTTCGGAAGGCGGCTCGCCAGTACGACGCCCAAAGCACCACCAACACTCTCTCCAAATCTCAGAACCAAAGGAGCGATTCAGTTCATAGGCTTCCGTTGACGCTGGATTTAGTGGCTCTATGCGAGGAGGGTAAGGTAACTGATGCTCTGGAATATATTGGCCAAGGTGCTAATGTTGATTATGGTGTTTTTATTGCTTTGTTGAATTCTTGTCGGAATTTGAAATTACTTGAGGCTGGAAGAAGGGTGGATGGGTTACTGAAGGGGACGAAGTTTCGTAGTGATGTGGAATTGAACAATAAATTGATTGGAGTGTATTCAACTTGTGGTTGTATGAAAGATGCACGTAAGGTTTTTGATAAAATGCCTGACAGGGATACTAGGACTTGGAATTTGATGATCAAAGGGTATGGAGATAATGGGGAAGGAGATGATGGGCTGGCATTGTTTGAGCAAATGAATAATGTTGGTTTGCAGCCAAATTCAGAAACATTTCTGGTGGTTTTAGCGGCTTGTGCTATGGCTGAAGCTGTGGAGGAAGGTGTATTTTACTTTAACATAATGGAAAATGAGTATGGAATCAGTCCTGAAATTGAACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGTCATTTGATTGAAGCCGAGGAGTTCATTGAGAAAATGCCCATCGATCCCACAGCCAAAATTTGGGATGCCCTTAGAAACTATGCTCGACTCCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCATGACGACCACGACTATCAAACCACCACTCCCTCCACGGAGGAAGCAATCGAGCACGAATATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGATGTGCAATGCCATATAAAGAAGAGGATGAAGGGAAGTTGAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTGCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGACTGGCCATTGCTTATGGATTGATCAGTACACCGGCAAGAACGACGCTGAGGATCATCAAGAATCTTCGAATCTGCGGCGACTGCCACAATGCAATCAAGATCATGTCAAAAATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGATGGCAAATGCTCTTGTAGGGATTATTGGTAAATACATTATTAACTCTATCATACACAATGATGTTCTGCCCTCCTTGGCGATTTACTTG

mRNA sequence

ATAATAATTTTCATTTCATTTCCCTAAATATTCCGAAAAGAAAAAGAAAAAAATAATCTTTCAGAAACTCTTTCGTGGAAATATTATCTGTAGTTTGACCATCTTCTGGGCTGTAGTTTGTATGCCCCACGAATATTATCCAAAAACTCAGCAATGTCTTCCTCCATTCTTTCTCATGCCACTGGAAACTCCATTATCACTACCAATTTCAAATCTCGAATCCTCTCGATTCACTTTCCGCCCGACAAATCCTTCCGCCCGACGCCCTTCTACACTAATGCTCTCTCCAATTCCCGCTTTCGGAAGGCGGCTCGCCAGTACGACGCCCAAAGCACCACCAACACTCTCTCCAAATCTCAGAACCAAAGGAGCGATTCAGTTCATAGGCTTCCGTTGACGCTGGATTTAGTGGCTCTATGCGAGGAGGGTAAGGTAACTGATGCTCTGGAATATATTGGCCAAGGTGCTAATGTTGATTATGGTGTTTTTATTGCTTTGTTGAATTCTTGTCGGAATTTGAAATTACTTGAGGCTGGAAGAAGGGTGGATGGGTTACTGAAGGGGACGAAGTTTCGTAGTGATGTGGAATTGAACAATAAATTGATTGGAGTGTATTCAACTTGTGGTTGTATGAAAGATGCACGTAAGGTTTTTGATAAAATGCCTGACAGGGATACTAGGACTTGGAATTTGATGATCAAAGGGTATGGAGATAATGGGGAAGGAGATGATGGGCTGGCATTGTTTGAGCAAATGAATAATGTTGGTTTGCAGCCAAATTCAGAAACATTTCTGGTGGTTTTAGCGGCTTGTGCTATGGCTGAAGCTGTGGAGGAAGGTGTATTTTACTTTAACATAATGGAAAATGAGTATGGAATCAGTCCTGAAATTGAACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGTCATTTGATTGAAGCCGAGGAGTTCATTGAGAAAATGCCCATCGATCCCACAGCCAAAATTTGGGATGCCCTTAGAAACTATGCTCGACTCCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCATGACGACCACGACTATCAAACCACCACTCCCTCCACGGAGGAAGCAATCGAGCACGAATATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGATGTGCAATGCCATATAAAGAAGAGGATGAAGGGAAGTTGAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTGCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGACTGGCCATTGCTTATGGATTGATCAGTACACCGGCAAGAACGACGCTGAGGATCATCAAGAATCTTCGAATCTGCGGCGACTGCCACAATGCAATCAAGATCATGTCAAAAATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGATGGCAAATGCTCTTGTAGGGATTATTGGTAAATACATTATTAACTCTATCATACACAATGATGTTCTGCCCTCCTTGGCGATTTACTTG

Coding sequence (CDS)

ATGTCTTCCTCCATTCTTTCTCATGCCACTGGAAACTCCATTATCACTACCAATTTCAAATCTCGAATCCTCTCGATTCACTTTCCGCCCGACAAATCCTTCCGCCCGACGCCCTTCTACACTAATGCTCTCTCCAATTCCCGCTTTCGGAAGGCGGCTCGCCAGTACGACGCCCAAAGCACCACCAACACTCTCTCCAAATCTCAGAACCAAAGGAGCGATTCAGTTCATAGGCTTCCGTTGACGCTGGATTTAGTGGCTCTATGCGAGGAGGGTAAGGTAACTGATGCTCTGGAATATATTGGCCAAGGTGCTAATGTTGATTATGGTGTTTTTATTGCTTTGTTGAATTCTTGTCGGAATTTGAAATTACTTGAGGCTGGAAGAAGGGTGGATGGGTTACTGAAGGGGACGAAGTTTCGTAGTGATGTGGAATTGAACAATAAATTGATTGGAGTGTATTCAACTTGTGGTTGTATGAAAGATGCACGTAAGGTTTTTGATAAAATGCCTGACAGGGATACTAGGACTTGGAATTTGATGATCAAAGGGTATGGAGATAATGGGGAAGGAGATGATGGGCTGGCATTGTTTGAGCAAATGAATAATGTTGGTTTGCAGCCAAATTCAGAAACATTTCTGGTGGTTTTAGCGGCTTGTGCTATGGCTGAAGCTGTGGAGGAAGGTGTATTTTACTTTAACATAATGGAAAATGAGTATGGAATCAGTCCTGAAATTGAACATTATTTGGGAGTTGTTGATGTTCTTGGGAAATCTGGTCATTTGATTGAAGCCGAGGAGTTCATTGAGAAAATGCCCATCGATCCCACAGCCAAAATTTGGGATGCCCTTAGAAACTATGCTCGACTCCATGGAAACATGGAGCTTGAAGATCGAGCTGAGGAGTTGATGTTCTCTCTTGACCCGTCCATGACGACCACGACTATCAAACCACCACTCCCTCCACGGAGGAAGCAATCGAGCACGAATATGTTGGAGGAGAAGGACAGGGTGAGGGAGTTTAGATGTGCAATGCCATATAAAGAAGAGGATGAAGGGAAGTTGAAAGGATTGAATGGACAAATGAGAGAAGCAGGGTATGTGCCAGATACAAGATATGTGCTACATGACATTGATGAAGAGGCCAAACAGCAGGCTTTGCAATACCATAGCGAGCGACTGGCCATTGCTTATGGATTGATCAGTACACCGGCAAGAACGACGCTGAGGATCATCAAGAATCTTCGAATCTGCGGCGACTGCCACAATGCAATCAAGATCATGTCAAAAATTGTTGGGAGAGAGTTGATTGTTAGAGATAATAAACGTTTTCATCACTTTAAAGATGGCAAATGCTCTTGTAGGGATTATTGGTAA

Protein sequence

MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQSTTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCRNLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW

Homology

[Close]

BLAST of Clc07G13420 vs. NCBI nr
Match: XP_038889181.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 833.9 bits (2153), Expect = 6.5e-238
Identity = 414/458 (90.39%), Postives = 426/458 (93.01%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI  HA GNS+IT NFKSR L IHFP  KSFR TP  TNALSNSRFRKA RQYD QS
Sbjct: 1   MSSSIPPHAAGNSVITANFKSRSLPIHFPTAKSFRSTPLCTNALSNSRFRKAVRQYDDQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           T NTLSKSQNQ SDSV+ LP T+DL+ALCEEGKV DALEYIGQGANVDYGVF ALLNSC 
Sbjct: 61  TANTLSKSQNQTSDSVYSLPSTVDLMALCEEGKVIDALEYIGQGANVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRV+G+LKGT FR DVELNNKLI VYSTCGCMKDARKVFDKMPDRDTRTWNL
Sbjct: 121 NLKLLEAGRRVNGVLKGTNFRGDVELNNKLIEVYSTCGCMKDARKVFDKMPDRDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYGDNGEGDDGLALFEQM NVGLQPN ETFLVVLAACA+AEAVEEG+FYFNIMENEY
Sbjct: 181 MIKGYGDNGEGDDGLALFEQMKNVGLQPNPETFLVVLAACAIAEAVEEGLFYFNIMENEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GISPEIEHYLGVVDVLGK GHLIEAEEFIEKMPI+PTAK+WDALRNYARLHGNMELEDRA
Sbjct: 241 GISPEIEHYLGVVDVLGKFGHLIEAEEFIEKMPINPTAKLWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS   TTIKPPLPPRRK SSTNMLEEKDRVREFRCAMPYKE+ EGKLKGLNG
Sbjct: 301 EELMFSLDPSTMATTIKPPLPPRRKDSSTNMLEEKDRVREFRCAMPYKEKGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           Q+REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QIREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. NCBI nr
Match: KAA0061500.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 826.6 bits (2134), Expect = 1.0e-235
Identity = 413/458 (90.17%), Postives = 428/458 (93.45%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI SHAT NSI TTNFKS I+ IHFP  KSFR TP  TNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLS+SQNQ SDSV+  P T+DL+ALC+EGKV DALEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR DVELNNKLI +YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD+GLALFEQM NVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGVVDVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T TT KP LPPRRKQSSTNMLEEKDRVREFR AMPYKEE EGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. NCBI nr
Match: XP_008459269.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis melo])

HSP 1 Score: 825.5 bits (2131), Expect = 2.3e-235
Identity = 411/458 (89.74%), Postives = 427/458 (93.23%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI SHAT NSI TTNFKS I+ IHFP  KSFR TP  TNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLS+SQNQ SDSV+  P T+DL+ALCEEGKV DALEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR DVELNNKLI +YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD+GLALFE+M NVGLQPNSETFLV+LAACAMAEAVEEGVFYFNIM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T TT KP LPPRRKQSSTNMLEEKDRVREFR AMPYKEE EGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. NCBI nr
Match: TYK10773.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 823.2 bits (2125), Expect = 1.1e-234
Identity = 410/458 (89.52%), Postives = 426/458 (93.01%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MS SI SHAT NSI TTNFKS I+ IHFP  KSFR TP  TNALSNSRFRKAARQYDAQS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLS+SQNQ SDSV+  P T+DL+ALCEEGKV DALEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR DVELNNKLI +YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD+GLALFE+M NVGLQPNSETFLV+LAACAMAEAVEEGVFYFNIM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T TT KP LPPRRKQSSTNMLEEKDRVREFR AMPYKEE EGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. NCBI nr
Match: XP_004141167.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sativus])

HSP 1 Score: 815.8 bits (2106), Expect = 1.8e-232
Identity = 407/458 (88.86%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI SHAT NS  TTNFKSRIL  HFP  KSFR T   TNALSNSRFRK+A QYDAQS
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLSKSQN+ SDSV+ LP T+DL+ALCEEGKV D LEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSKSQNRTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR D+ELNN+LI +YS CGCMKDARKVFDKM ++DT +WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYGDNGEGD+GLALFEQM N GLQPNSETFLVVLAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGVVDVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T+TTIKP LPPRRKQSSTNMLEEKDRVREFRCAMPYKEE EG+LKGLNG
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. ExPASy Swiss-Prot
Match: Q9ZQE5 (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 426.0 bits (1094), Expect = 5.3e-118
Identity = 211/395 (53.42%), Postives = 272/395 (68.86%), Query Frame = 0


Query: 67  KSQNQRSDSVHRL---PLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCRNLK 126
           +S NQ  + ++ +   P   +++ LC+     DA+E + +GA  D   F+ L  SC NLK
Sbjct: 191 RSSNQSPNQMNEVAPPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLK 250

Query: 127 LLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIK 186
            LE  ++V      +KFR D +LNN +I ++  C  + DA++VFD M D+D  +W+LM+ 
Sbjct: 251 SLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMC 310

Query: 187 GYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGIS 246
            Y DNG GDD L LFE+M   GL+PN ETFL V  ACA    +EE   +F+ M+NE+GIS
Sbjct: 311 AYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGIS 370

Query: 247 PEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEEL 306
           P+ EHYLGV+ VLGK GHL+EAE++I  +P +PTA  W+A+RNYARLHG+++LED  EEL
Sbjct: 371 PKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEEL 430

Query: 307 MFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNGQMR 366
           M  +DPS      K P PP +    TNM+  K R+ EFR    YK+E + ++    G + 
Sbjct: 431 MVDVDPSKAVIN-KIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAK-EMAAKKGVV- 490

Query: 367 EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHN 426
              YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP R TL IIKNLR+CGDCHN
Sbjct: 491 ---YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHN 550

Query: 427 AIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
            IKIMSKI+GR LIVRDNKRFHHFKDGKCSC DYW
Sbjct: 551 FIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Clc07G13420 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.6e-77
Identity = 150/367 (40.87%), Postives = 215/367 (58.58%), Query Frame = 0


Query: 115 LLNSCRNLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRD 174
           +L++C  L  L  G+ V  L++ T F S + ++  LIG+Y+ CG + +AR++FD M  ++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485

Query: 175 TRTWNLMIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFN 234
             TWN MI GYG +G+G + L +F +M N G+ P   TFL VL AC+ A  V+EG   FN
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 235 IMENEYGISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNM 294
            M + YG  P ++HY  +VD+LG++GHL  A +FIE M I+P + +W+ L    R+H + 
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605

Query: 295 ELEDRAEELMFSLDPSMT------------------TTTIKPPLPPRR--KQSSTNMLEE 354
            L     E +F LDP                       T++     R+  K     ++E 
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665

Query: 355 KDRVREFRC---AMPYKEEDEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHS 414
            +    F     + P  +E   KL+ L G+MREAGY P+T   LHD++EE ++  ++ HS
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHS 725

Query: 415 ERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGK 459
           ERLAIA+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHFKDG 
Sbjct: 726 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 785

[Close]

BLAST of Clc07G13420 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-74
Identity = 151/396 (38.13%), Postives = 227/396 (57.32%), Query Frame = 0


Query: 90  EEGKVTDALEYIGQ--GANVDYG--VFIALLNSCRNLKLLEAGRRVDGLLKGTKFRSDVE 149
           + G+  +AL    Q   A V  G   F +++ +C +L  L  G+++ G +    F S++ 
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 150 LNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIKGYGDNGEGDDGLALFEQMNNVG 209
           + + L+ +YS CG +K ARK+FD+M   D  +W  +I G+  +G G + ++LFE+M   G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 210 LQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGISPEIEHYLGVVDVLGKSGHLIEA 269
           ++PN   F+ VL AC+    V+E   YFN M   YG++ E+EHY  V D+LG++G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 270 EEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEELMFSLD----------------- 329
             FI KM ++PT  +W  L +   +H N+EL ++  E +F++D                 
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 330 ---PSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRC---AMPYKEEDEGKLKGLNGQM 389
                M    ++      RK+ + + +E K++   F     + P  ++    LK +  QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619

Query: 390 REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCH 449
            + GYV DT  VLHD+DEE K++ L  HSERLA+A+G+I+T   TT+R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679

Query: 450 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
            AIK +SKI  RE+IVRDN RFHHF  G CSC DYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of Clc07G13420 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.6e-74
Identity = 144/370 (38.92%), Postives = 220/370 (59.46%), Query Frame = 0


Query: 112 FIALLNSCRNLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMP 171
           + +L  +C +   LE G+ V   +  +  +      N L+ +Y+  G + DARK+FD++ 
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324

Query: 172 DRDTRTWNLMIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVF 231
            RD  +WN ++  Y  +G G + +  FE+M  VG++PN  +FL VL AC+ +  ++EG  
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384

Query: 232 YFNIMENEYGISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLH 291
           Y+ +M+ + GI PE  HY+ VVD+LG++G L  A  FIE+MPI+PTA IW AL N  R+H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 444

Query: 292 GNMELEDRAEELMFSLDP--------------------SMTTTTIKPPLPPRRKQSSTNM 351
            N EL   A E +F LDP                           K      +K+ + + 
Sbjct: 445 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 504

Query: 352 LEEKDRVREFRC---AMPYKEEDEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQ 411
           +E ++ +  F       P +EE   K + +  +++E GYVPDT +V+  +D++ ++  LQ
Sbjct: 505 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 564

Query: 412 YHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFK 459
           YHSE++A+A+ L++TP  +T+ I KN+R+CGDCH AIK+ SK+VGRE+IVRD  RFHHFK
Sbjct: 565 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 624

[Close]

BLAST of Clc07G13420 vs. ExPASy Swiss-Prot
Match: Q9SUU7 (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.1e-74
Identity = 150/391 (38.36%), Postives = 226/391 (57.80%), Query Frame = 0


Query: 84  DLVALCEEGKVTDALEYIGQGANVDYGVFIALL----NSCRNLKLLEAGRRVDGLLKGTK 143
           +L ++C EGKV  A+E I    N  Y V +  L      C + + L+  + V   +  + 
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211

Query: 144 FRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIKGYGDNGEGDDGLALFE 203
             SD+   N +I +YS CG ++DA  VF+ MP+R+  TW  +I+ +  NG+G+D +  F 
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271

Query: 204 QMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGISPEIEHYLGVVDVLGKS 263
           +    G +P+ E F  +  AC +   + EG+ +F  M  EYGI P +EHY+ +V +L + 
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331

Query: 264 GHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSMTTTTIKPP 323
           G+L EA  F+E M  +P   +W+ L N +R+HG++ L DR ++++  LD S      K  
Sbjct: 332 GYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAG 391

Query: 324 LPPRRKQSSTNMLEEKDR---------VREFRC---AMPYKEEDEGKLKGLNGQMREAGY 383
           L P +   S+++++EK +         +R       + P   E    LK L   M E GY
Sbjct: 392 LVPVK---SSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGY 451

Query: 384 VPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKI 443
           VP ++  LHD+D+E+K + L  H+ER A     + TPAR+ +R++KNLR+C DCHNA+K+
Sbjct: 452 VPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKL 511

Query: 444 MSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           MSKIVGRELI RD KRFHH KDG CSCR+YW
Sbjct: 512 MSKIVGRELISRDAKRFHHMKDGVCSCREYW 537

[Close]

BLAST of Clc07G13420 vs. ExPASy TrEMBL
Match: A0A5A7V2K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00600 PE=3 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.0e-236
Identity = 413/458 (90.17%), Postives = 428/458 (93.45%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI SHAT NSI TTNFKS I+ IHFP  KSFR TP  TNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLS+SQNQ SDSV+  P T+DL+ALC+EGKV DALEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCKEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR DVELNNKLI +YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD+GLALFEQM NVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEQMKNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGVVDVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T TT KP LPPRRKQSSTNMLEEKDRVREFR AMPYKEE EGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. ExPASy TrEMBL
Match: A0A1S3C9A6 (pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=3656 GN=LOC103498440 PE=3 SV=1)

HSP 1 Score: 825.5 bits (2131), Expect = 1.1e-235
Identity = 411/458 (89.74%), Postives = 427/458 (93.23%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI SHAT NSI TTNFKS I+ IHFP  KSFR TP  TNALSNSRFRKAARQYDAQS
Sbjct: 1   MSSSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLS+SQNQ SDSV+  P T+DL+ALCEEGKV DALEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR DVELNNKLI +YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD+GLALFE+M NVGLQPNSETFLV+LAACAMAEAVEEGVFYFNIM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T TT KP LPPRRKQSSTNMLEEKDRVREFR AMPYKEE EGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. ExPASy TrEMBL
Match: A0A5D3CFT5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00860 PE=3 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 5.5e-235
Identity = 410/458 (89.52%), Postives = 426/458 (93.01%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MS SI SHAT NSI TTNFKS I+ IHFP  KSFR TP  TNALSNSRFRKAARQYDAQS
Sbjct: 1   MSFSIHSHATVNSIATTNFKSLIIPIHFPAVKSFRSTPLSTNALSNSRFRKAARQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLS+SQNQ SDSV+  P T+DL+ALCEEGKV DALEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSESQNQTSDSVYSFPSTVDLLALCEEGKVIDALEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR DVELNNKLI +YS CGCMK+ARKVFDKMP++DTRTWNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDVELNNKLIEMYSNCGCMKNARKVFDKMPNKDTRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD+GLALFE+M NVGLQPNSETFLV+LAACAMAEAVEEGVFYFNIM NEY
Sbjct: 181 MIKGYGENGEGDNGLALFEKMKNVGLQPNSETFLVILAACAMAEAVEEGVFYFNIMGNEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGV+DVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GIDPEIEHYLGVIDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T TT KP LPPRRKQSSTNMLEEKDRVREFR AMPYKEE EGKLKGLNG
Sbjct: 301 EELMFSLDPSTTATTTKPSLPPRRKQSSTNMLEEKDRVREFRSAMPYKEEGEGKLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QM+EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMKEAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. ExPASy TrEMBL
Match: A0A0A0LEV9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000530 PE=3 SV=1)

HSP 1 Score: 815.8 bits (2106), Expect = 8.8e-233
Identity = 407/458 (88.86%), Postives = 424/458 (92.58%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           MSSSI SHAT NS  TTNFKSRIL  HFP  KSFR T   TNALSNSRFRK+A QYDAQS
Sbjct: 1   MSSSIPSHATVNSTATTNFKSRILPFHFPVLKSFRSTLLSTNALSNSRFRKSAHQYDAQS 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLSKSQN+ SDSV+ LP T+DL+ALCEEGKV D LEYIGQGA VDYGVF ALLNSC 
Sbjct: 61  TTNTLSKSQNRTSDSVYSLPSTVDLLALCEEGKVIDVLEYIGQGAKVDYGVFTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           NLKLLEAGRRVDGLLKGTKFR D+ELNN+LI +YS CGCMKDARKVFDKM ++DT +WNL
Sbjct: 121 NLKLLEAGRRVDGLLKGTKFRGDLELNNRLIEMYSNCGCMKDARKVFDKMANKDTSSWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYGDNGEGD+GLALFEQM N GLQPNSETFLVVLAACAMAEAV+EGVFYF IM NEY
Sbjct: 181 MIKGYGDNGEGDNGLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI+PEIEHYLGVVDVLGKSGHLIEAEEFIEKMPI+PTAKIWDALRNYARLHGNMELEDRA
Sbjct: 241 GINPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPINPTAKIWDALRNYARLHGNMELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNG 360
           EELMFSLDPS T+TTIKP LPPRRKQSSTNMLEEKDRVREFRCAMPYKEE EG+LKGLNG
Sbjct: 301 EELMFSLDPSTTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNG 360

Query: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420
           QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD
Sbjct: 361 QMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGD 420

Query: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 CHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 458

[Close]

BLAST of Clc07G13420 vs. ExPASy TrEMBL
Match: A0A6J1FC52 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444273 PE=3 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 4.0e-217
Identity = 385/459 (83.88%), Postives = 408/459 (88.89%), Query Frame = 0


Query: 1   MSSSILSHATGNSIITTNFKSRILSIHFPPDKSFRPTPFYTNALSNSRFRKAARQYDAQS 60
           M+SSI S  T NSIITTNF SRI+  H P  KSFRPT F  N+LSNS  RK AR+YD Q+
Sbjct: 1   MASSIPSQTTPNSIITTNFTSRIIPFHSPAVKSFRPTLFCPNSLSNSSNRKPARRYDGQT 60

Query: 61  TTNTLSKSQNQRSDSVHRLPLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCR 120
           TTNTLSKSQN+ SDSV  LP T+DLVALCE G+V D LE+IGQGAN+DYG+  ALLNSC 
Sbjct: 61  TTNTLSKSQNRTSDSVLSLPSTVDLVALCEAGEVMDVLEFIGQGANLDYGICTALLNSCC 120

Query: 121 NLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNL 180
           N KLLEAGRRVD LLKGTKF  DV LNN LI +YS CGCMKDAR+VFDKMPDRD RTWNL
Sbjct: 121 NFKLLEAGRRVDRLLKGTKFSGDVGLNNNLIEMYSCCGCMKDARRVFDKMPDRDIRTWNL 180

Query: 181 MIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEY 240
           MIKGYG+NGEGD GLALFE+M +VGLQPNSETFLVVLAACAMAEAVEEG+FYFN MENEY
Sbjct: 181 MIKGYGENGEGDGGLALFERMKSVGLQPNSETFLVVLAACAMAEAVEEGLFYFNSMENEY 240

Query: 241 GISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRA 300
           GI PEIEHYLGVVDVLGKSGHLIEAEEFI+K+PI+PTAKIWDALR YARLHGN+ELEDRA
Sbjct: 241 GIIPEIEHYLGVVDVLGKSGHLIEAEEFIKKIPINPTAKIWDALRIYARLHGNIELEDRA 300

Query: 301 EELMFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDE-GKLKGLN 360
           EEL+FS DPSM  T  KPPL P RKQS+TNMLEEKDRVREFRCAMPYKEE E GKLKGLN
Sbjct: 301 EELIFSYDPSMAPTAAKPPLLPPRKQSATNMLEEKDRVREFRCAMPYKEEGEGGKLKGLN 360

Query: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420
           GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG
Sbjct: 361 GQMREAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICG 420

Query: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSC DYW
Sbjct: 421 DCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 459

[Close]

BLAST of Clc07G13420 vs. TAIR 10
Match: AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 426.0 bits (1094), Expect = 3.8e-119
Identity = 211/395 (53.42%), Postives = 272/395 (68.86%), Query Frame = 0


Query: 67  KSQNQRSDSVHRL---PLTLDLVALCEEGKVTDALEYIGQGANVDYGVFIALLNSCRNLK 126
           +S NQ  + ++ +   P   +++ LC+     DA+E + +GA  D   F+ L  SC NLK
Sbjct: 191 RSSNQSPNQMNEVAPPPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLK 250

Query: 127 LLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIK 186
            LE  ++V      +KFR D +LNN +I ++  C  + DA++VFD M D+D  +W+LM+ 
Sbjct: 251 SLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMC 310

Query: 187 GYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGIS 246
            Y DNG GDD L LFE+M   GL+PN ETFL V  ACA    +EE   +F+ M+NE+GIS
Sbjct: 311 AYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGIS 370

Query: 247 PEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEEL 306
           P+ EHYLGV+ VLGK GHL+EAE++I  +P +PTA  W+A+RNYARLHG+++LED  EEL
Sbjct: 371 PKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEEL 430

Query: 307 MFSLDPSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEDEGKLKGLNGQMR 366
           M  +DPS      K P PP +    TNM+  K R+ EFR    YK+E + ++    G + 
Sbjct: 431 MVDVDPSKAVIN-KIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAK-EMAAKKGVV- 490

Query: 367 EAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHN 426
              YVPDTR+VLHDID+EAK+QAL YHSERLAIAYG+I TP R TL IIKNLR+CGDCHN
Sbjct: 491 ---YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHN 550

Query: 427 AIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
            IKIMSKI+GR LIVRDNKRFHHFKDGKCSC DYW
Sbjct: 551 FIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Clc07G13420 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 290.0 bits (741), Expect = 3.2e-78
Identity = 150/367 (40.87%), Postives = 215/367 (58.58%), Query Frame = 0


Query: 115 LLNSCRNLKLLEAGRRVDGLLKGTKFRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRD 174
           +L++C  L  L  G+ V  L++ T F S + ++  LIG+Y+ CG + +AR++FD M  ++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485

Query: 175 TRTWNLMIKGYGDNGEGDDGLALFEQMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFN 234
             TWN MI GYG +G+G + L +F +M N G+ P   TFL VL AC+ A  V+EG   FN
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 235 IMENEYGISPEIEHYLGVVDVLGKSGHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNM 294
            M + YG  P ++HY  +VD+LG++GHL  A +FIE M I+P + +W+ L    R+H + 
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605

Query: 295 ELEDRAEELMFSLDPSMT------------------TTTIKPPLPPRR--KQSSTNMLEE 354
            L     E +F LDP                       T++     R+  K     ++E 
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665

Query: 355 KDRVREFRC---AMPYKEEDEGKLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQALQYHS 414
            +    F     + P  +E   KL+ L G+MREAGY P+T   LHD++EE ++  ++ HS
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHS 725

Query: 415 ERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGK 459
           ERLAIA+GLI+T   T +RIIKNLR+C DCH   K++SKI  R ++VRD  RFHHFKDG 
Sbjct: 726 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 785

[Close]

BLAST of Clc07G13420 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 281.6 bits (719), Expect = 1.2e-75
Identity = 151/396 (38.13%), Postives = 227/396 (57.32%), Query Frame = 0


Query: 90  EEGKVTDALEYIGQ--GANVDYG--VFIALLNSCRNLKLLEAGRRVDGLLKGTKFRSDVE 149
           + G+  +AL    Q   A V  G   F +++ +C +L  L  G+++ G +    F S++ 
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 150 LNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIKGYGDNGEGDDGLALFEQMNNVG 209
           + + L+ +YS CG +K ARK+FD+M   D  +W  +I G+  +G G + ++LFE+M   G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439

Query: 210 LQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGISPEIEHYLGVVDVLGKSGHLIEA 269
           ++PN   F+ VL AC+    V+E   YFN M   YG++ E+EHY  V D+LG++G L EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499

Query: 270 EEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEELMFSLD----------------- 329
             FI KM ++PT  +W  L +   +H N+EL ++  E +F++D                 
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559

Query: 330 ---PSMTTTTIKPPLPPRRKQSSTNMLEEKDRVREFRC---AMPYKEEDEGKLKGLNGQM 389
                M    ++      RK+ + + +E K++   F     + P  ++    LK +  QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619

Query: 390 REAGYVPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCH 449
            + GYV DT  VLHD+DEE K++ L  HSERLA+A+G+I+T   TT+R+ KN+RIC DCH
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCH 679

Query: 450 NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
            AIK +SKI  RE+IVRDN RFHHF  G CSC DYW
Sbjct: 680 VAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]

BLAST of Clc07G13420 vs. TAIR 10
Match: AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 279.3 bits (713), Expect = 5.7e-75
Identity = 150/391 (38.36%), Postives = 226/391 (57.80%), Query Frame = 0


Query: 84  DLVALCEEGKVTDALEYIGQGANVDYGVFIALL----NSCRNLKLLEAGRRVDGLLKGTK 143
           +L ++C EGKV  A+E I    N  Y V +  L      C + + L+  + V   +  + 
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211

Query: 144 FRSDVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIKGYGDNGEGDDGLALFE 203
             SD+   N +I +YS CG ++DA  VF+ MP+R+  TW  +I+ +  NG+G+D +  F 
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271

Query: 204 QMNNVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGISPEIEHYLGVVDVLGKS 263
           +    G +P+ E F  +  AC +   + EG+ +F  M  EYGI P +EHY+ +V +L + 
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331

Query: 264 GHLIEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSMTTTTIKPP 323
           G+L EA  F+E M  +P   +W+ L N +R+HG++ L DR ++++  LD S      K  
Sbjct: 332 GYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAG 391

Query: 324 LPPRRKQSSTNMLEEKDR---------VREFRC---AMPYKEEDEGKLKGLNGQMREAGY 383
           L P +   S+++++EK +         +R       + P   E    LK L   M E GY
Sbjct: 392 LVPVK---SSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGY 451

Query: 384 VPDTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKI 443
           VP ++  LHD+D+E+K + L  H+ER A     + TPAR+ +R++KNLR+C DCHNA+K+
Sbjct: 452 VPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKL 511

Query: 444 MSKIVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           MSKIVGRELI RD KRFHH KDG CSCR+YW
Sbjct: 512 MSKIVGRELISRDAKRFHHMKDGVCSCREYW 537

[Close]

BLAST of Clc07G13420 vs. TAIR 10
Match: AT2G25580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 7.5e-75
Identity = 146/388 (37.63%), Postives = 222/388 (57.22%), Query Frame = 0


Query: 87  ALCEEGKVTDALEYIGQGANVDYGV----FIALLNSCRNLKLLEAGRRVDGLLKGTKFRS 146
           A C+ GKV  AL  I   A+++Y V     + L   C   + L+  + V G +  +    
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287

Query: 147 DVELNNKLIGVYSTCGCMKDARKVFDKMPDRDTRTWNLMIKGYGDNGEGDDGLALFEQMN 206
           D+  N+ L+ +YS CG   +A  VF+KM +++  TW ++I+ +  NG G+D + +F +  
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347

Query: 207 NVGLQPNSETFLVVLAACAMAEAVEEGVFYFNIMENEYGISPEIEHYLGVVDVLGKSGHL 266
             G  P+ + F  +  AC M   V+EG+ +F  M  +YGI+P IE Y+ +V++    G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407

Query: 267 IEAEEFIEKMPIDPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSMTTTTIKPPLPP 326
            EA EF+E+MP++P   +W+ L N +R+HGN+EL D   E++  LDP+      +    P
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 467

Query: 327 RR---------KQSSTNMLEEKDRVREFRCA---MPYKEEDEGKLKGLNGQMREAGYVPD 386
            +         K+ S  +   K  ++EFR     +P  +E    L+ L   M E GYV +
Sbjct: 468 VKASDVEKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAE 527

Query: 387 TRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSK 446
           TR  LHDID+E+K+  L  HSER+A A  ++++  R    +IKNLR+C DCHNA+KIMS 
Sbjct: 528 TRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSD 587

Query: 447 IVGRELIVRDNKRFHHFKDGKCSCRDYW 459
           IVGRE+I RD KRFH  K+G C+C+DYW
Sbjct: 588 IVGREVITRDIKRFHQMKNGACTCKDYW 615

The following BLAST results are available for this feature:

BLAST of Clc07G13420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889181.1	6.5e-238	90.39	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Benin...	[more]
KAA0061500.1	1.0e-235	90.17	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008459269.1	2.3e-235	89.74	PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis m...	[more]
TYK10773.1	1.1e-234	89.52	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004141167.1	1.8e-232	88.86	pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sa...	[more]

BLAST of Clc07G13420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQE5	5.3e-118	53.42	Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop...	[more]
Q9SUH6	4.6e-77	40.87	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LW63	1.6e-74	38.13	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
Q9LIQ7	3.6e-74	38.92	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]
Q9SUU7	8.1e-74	38.36	Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop...	[more]

BLAST of Clc07G13420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V2K9	5.0e-236	90.17	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C9A6	1.1e-235	89.74	pentatricopeptide repeat-containing protein At2g15690-like OS=Cucumis melo OX=36...	[more]
A0A5D3CFT5	5.5e-235	89.52	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LEV9	8.8e-233	88.86	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G0005...	[more]
A0A6J1FC52	4.0e-217	83.88	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]

BLAST of Clc07G13420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15690.1	3.8e-119	53.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	3.2e-78	40.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	1.2e-75	38.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32450.1	5.7e-75	38.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G25580.1	7.5e-75	37.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 346..448 e-value: 1.8E-33 score: 115.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 78..318 e-value: 1.4E-28 score: 102.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 177..209 e-value: 8.6E-7 score: 26.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 174..221 e-value: 7.4E-10 score: 38.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 249..272 e-value: 0.28 score: 11.5 coord: 148..173 e-value: 0.016 score: 15.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 12.375365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..327
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 5..453
None	No IPR available	PANTHER	PTHR24015:SF1685	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 5..453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G13420.1	Clc07G13420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016412	serine O-acyltransferase activity
molecular_function	GO:0008270	zinc ion binding