Clc07G12940 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G12940
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor TINY
Location	ClcChr07: 27720313 .. 27721300 (-)
RNA-Seq Expression	Clc07G12940
Synteny	Clc07G12940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGAGCATCAATGGCGGAACCAAACAATTGGAATTCAGAATCTGAAAGTACAGAAATGAAAAGGGGAAAACAGACGGATCGAGAACAGAGAGATCAGAAACACCCAATTTACAGAGGCGTACGGAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAGCCGAGGAAGAAGTCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCGCTCAGCATCAAAGGTGATTCAGCAAAGGCCATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCACGGCCGGTGTCCTTAATGCCGAGGGATATTCAGGAGGCGGCTGCCAAGGCGGCGGCCATGGTCGATTTCGATTCCACTACGGCGTCGTTTTCGTCGTTTAATGATGAAGAAGGGTCAGAGGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAAGATATCAGAGCTGAGTCGTGGAACGAGTTCGAGTTCATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGCGGCCGGGGAATTGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACTACTCCGGTTACCTTCGACGGCGGCGATTGGGAGTGAAAAAACTTGTAAAATTAAAAAAAAAAGAAAAAAGAAAAAAGAAAAAAAAAAAGTTCTTTGGGGCTTGATTTTGGTTCTGGTTTCCGTTGTTTATTTTTCCGGGTTAACACGATTATTATTGGCGAAAGGAAATTTTAGTCAATTTTCAATTCCATTTCATGTGAGATTGTGGCGGTTTTGGGAAAAAAAAATGTAATCGTTGAAAATTAATATTTAAAAATGATGTAGTTTTTTCTTTTTATTTTGTCTCATTTTGAAAATGAACATGCTTCATATGAATGAAAATTGAGAACATT

mRNA sequence

TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGAGCATCAATGGCGGAACCAAACAATTGGAATTCAGAATCTGAAAGTACAGAAATGAAAAGGGGAAAACAGACGGATCGAGAACAGAGAGATCAGAAACACCCAATTTACAGAGGCGTACGGAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAGCCGAGGAAGAAGTCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCGCTCAGCATCAAAGGTGATTCAGCAAAGGCCATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCACGGCCGGTGTCCTTAATGCCGAGGGATATTCAGGAGGCGGCTGCCAAGGCGGCGGCCATGGTCGATTTCGATTCCACTACGGCGTCGTTTTCGTCGTTTAATGATGAAGAAGGGTCAGAGGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAAGATATCAGAGCTGAGTCGTGGAACGAGTTCGAGTTCATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGCGGCCGGGGAATTGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACTACTCCGGTTACCTTCGACGGCGGCGATTGGGAGTGAAAAAACTTGTAAAATTAAAAAAAAAAGAAAAAAGAAAAAAGAAAAAAAAAAAGTTCTTTGGGGCTTGATTTTGGTTCTGGTTTCCGTTGTTTATTTTTCCGGGTTAACACGATTATTATTGGCGAAAGGAAATTTTAGTCAATTTTCAATTCCATTTCATGTGAGATTGTGGCGGTTTTGGGAAAAAAAAATGTAATCGTTGAAAATTAATATTTAAAAATGATGTAGTTTTTTCTTTTTATTTTGTCTCATTTTGAAAATGAACATGCTTCATATGAATGAAAATTGAGAACATT

Coding sequence (CDS)

ATGGCGGAACCAAACAATTGGAATTCAGAATCTGAAAGTACAGAAATGAAAAGGGGAAAACAGACGGATCGAGAACAGAGAGATCAGAAACACCCAATTTACAGAGGCGTACGGAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAGCCGAGGAAGAAGTCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCGCTCAGCATCAAAGGTGATTCAGCAAAGGCCATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCACGGCCGGTGTCCTTAATGCCGAGGGATATTCAGGAGGCGGCTGCCAAGGCGGCGGCCATGGTCGATTTCGATTCCACTACGGCGTCGTTTTCGTCGTTTAATGATGAAGAAGGGTCAGAGGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAAGATATCAGAGCTGAGTCGTGGAACGAGTTCGAGTTCATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGCGGCCGGGGAATTGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACTACTCCGGTTACCTTCGACGGCGGCGATTGGGAGTGA

Protein sequence

MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGELDFCAVFSDQSTTPVTFDGGDWE

Homology

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BLAST of Clc07G12940 vs. NCBI nr
Match: XP_038906604.1 (ethylene-responsive transcription factor TINY-like [Benincasa hispida])

HSP 1 Score: 380.6 bits (976), Expect = 8.7e-102
Identity = 188/203 (92.61%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNNWNSESE+TE+KRGKQ D+EQRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 32  MAEPNNWNSESENTEIKRGKQGDQEQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 91

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ+AAAKAAAMV
Sbjct: 92  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQKAAAKAAAMV 151

Query: 121 DFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGE 180
           DFDS T S SS ND+EGS+ELGEIVELPNIE DIRAESWNEFEFIDSVDWWGNPPFAAGE
Sbjct: 152 DFDSATVSLSSSNDDEGSDELGEIVELPNIEGDIRAESWNEFEFIDSVDWWGNPPFAAGE 211

Query: 181 LDFCAVFSDQSTTPVTFDGGDWE 204
           +DFCAVFSDQST PVTFDGGDWE
Sbjct: 212 MDFCAVFSDQSTPPVTFDGGDWE 234

[Close]

BLAST of Clc07G12940 vs. NCBI nr
Match: XP_008447541.1 (PREDICTED: ethylene-responsive transcription factor TINY [Cucumis melo] >KAA0050826.1 ethylene-responsive transcription factor TINY [Cucumis melo var. makuwa] >TYK08521.1 ethylene-responsive transcription factor TINY [Cucumis melo var. makuwa])

HSP 1 Score: 370.5 bits (950), Expect = 9.0e-99
Identity = 187/203 (92.12%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSESES EMKRGKQ D+EQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGE 180
           DFDS T SFS  N EEGS+ELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPF A E
Sbjct: 121 DFDSETVSFS--NGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAE 180

Query: 181 LDFCAVFSDQSTTPVTFDGGDWE 204
           +DFCAVFSDQST PVTFD GDWE
Sbjct: 181 MDFCAVFSDQSTAPVTFDRGDWE 201

[Close]

BLAST of Clc07G12940 vs. NCBI nr
Match: XP_031737929.1 (ethylene-responsive transcription factor TINY-like [Cucumis sativus] >KAE8650718.1 hypothetical protein Csa_010130 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 7.6e-98
Identity = 186/203 (91.63%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSESES EMKRGKQ ++EQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGE 180
           DFDS T SFS  N EEGS+EL EIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPF A E
Sbjct: 121 DFDSETVSFS--NGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAE 180

Query: 181 LDFCAVFSDQSTTPVTFDGGDWE 204
           +DFCAVFSDQST PVTFD GDWE
Sbjct: 181 MDFCAVFSDQSTAPVTFDRGDWE 201

[Close]

BLAST of Clc07G12940 vs. NCBI nr
Match: XP_022979607.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 347.4 bits (890), Expect = 8.1e-92
Identity = 178/205 (86.83%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNNWNSES+  EMKRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGAEMKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFD-STTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAG 180
           DFD +TTASFSS NDE GS+ELGEIVELPNIEEDIRAESW+EFEFIDSVDWWGNPPF A 
Sbjct: 121 DFDTTTTASFSSSNDEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 ELDFCAVFSDQS-TTPVTFDGGDWE 204
           E+DFC +F+DQS TT  TF+GGDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Clc07G12940 vs. NCBI nr
Match: XP_023528290.1 (ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 5.3e-91
Identity = 177/205 (86.34%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNNWNSES+ TE+KRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFDST-TASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAG 180
           DFD+T TASFSS N E GS+ELGEIVELPNIEEDIRAESW+EFEFIDSVDWWGNPPF A 
Sbjct: 121 DFDTTRTASFSSSNYEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 ELDFCAVFSDQS-TTPVTFDGGDWE 204
           E+DFC +F+DQS TT  TF+GGDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Clc07G12940 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-41
Identity = 109/193 (56.48%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 8   NSESESTEMK-----RGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGT 67
           NSES+S   K       K+T R +   KHP+YRGVR R+WGKWVSEIR+PRKKSRIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 68  FTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAM--- 127
           F T EMAARAHDVAALSIKG +  AILNFP+LA   PRPVSL PRDIQ AA KAA M   
Sbjct: 80  FPTPEMAARAHDVAALSIKGTA--AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 139

Query: 128 VDFDSTTASFSSFNDEEG--------------SEELGEIVELPNIEEDIRAES---WNEF 176
             F S+T+S SS +                  SEELGEIVELP++      +S    NEF
Sbjct: 140 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

[Close]

BLAST of Clc07G12940 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.9e-39
Identity = 104/191 (54.45%), Postives = 122/191 (63.87%), Query Frame = 0


Query: 8   NSESESTEMKRGKQTDREQRDQ------KHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLG 67
           +  ++S E    +Q + E++ +      KHP+YRGVR+R+WGKWVSEIR+PRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 68  TFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVD 127
           TF + EMAARAHDVAALSIKG  A AILNFP LAG  PRP SL PRDIQ AA KAA M  
Sbjct: 64  TFPSPEMAARAHDVAALSIKG--ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET 123

Query: 128 FDSTTAS----FSSFNDEE-----------GSEELGEIVELPNI--EEDIRAESWNEFEF 176
             S ++S    FSS                GSEELGEIVELP++    D   +  NEF F
Sbjct: 124 SQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIF 183

[Close]

BLAST of Clc07G12940 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36
Identity = 97/189 (51.32%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 2   AEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLG 61
           A P N N+     + +R   +       +HP+YRGVR RSWGKWVSEIRQPRKK+RIWLG
Sbjct: 33  APPRNNNTR----KRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG 92

Query: 62  TFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV- 121
           TF TA+MAARAHDVAAL+IKG S  A+LNFP+LA L PRP S  P DIQ AAA+AAAMV 
Sbjct: 93  TFVTADMAARAHDVAALTIKGSS--AVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVV 152

Query: 122 ---------DFDSTTASFSSF--NDEEGSEELGEIVELPNIEE---DIRAESWNEFEFID 176
                      ++  +S SS+   + E  E L +IVELPNIEE   D    S  +  + +
Sbjct: 153 EEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSE 212

[Close]

BLAST of Clc07G12940 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.3e-35
Identity = 94/182 (51.65%), Postives = 116/182 (63.74%), Query Frame = 0


Query: 22  TDREQRD-QKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSI 81
           +D+E+++  K P+YRGVR RSWGKWVSEIR+PRKKSRIWLGTF TAEMA RAHDVAA+SI
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 82  KGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFDST--------------- 141
           KG S  AILNFP+L+ LLPRPVSL PRD++ AA KAA M DFD+T               
Sbjct: 66  KGTS--AILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSN 125

Query: 142 ----------TASFS--------SFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDS 170
                     T SFS        S  +   S++L EIV+LP++   +     NEF   DS
Sbjct: 126 KMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES--NEFVIFDS 182

[Close]

BLAST of Clc07G12940 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 96/198 (48.48%), Postives = 120/198 (60.61%), Query Frame = 0


Query: 21  QTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSI 80
           +T+ ++R +  P YRGVR R+WGKWVSEIR+PRKKSRIWLGTF+T EMAARAHD AAL+I
Sbjct: 30  RTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTI 89

Query: 81  KGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD----------------- 140
           KG S  A+LNFP+LA  LPRP S  PRD+Q AAA AAAM DF                  
Sbjct: 90  KGTS--AVLNFPELATYLPRPASSSPRDVQAAAAVAAAM-DFSPSSSSLVVSDPTTVIAP 149

Query: 141 ------------STTASFSSFNDEEGS--EELGEIVELPNIEEDIRAESWNEFEFIDSVD 188
                        T++S S  ++E  S  EEL EIVELP++E     ES +EF ++DS  
Sbjct: 150 AETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDS-- 209

[Close]

BLAST of Clc07G12940 vs. ExPASy TrEMBL
Match: A0A5D3C9I7 (Ethylene-responsive transcription factor TINY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00580 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.3e-99
Identity = 187/203 (92.12%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSESES EMKRGKQ D+EQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGE 180
           DFDS T SFS  N EEGS+ELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPF A E
Sbjct: 121 DFDSETVSFS--NGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAE 180

Query: 181 LDFCAVFSDQSTTPVTFDGGDWE 204
           +DFCAVFSDQST PVTFD GDWE
Sbjct: 181 MDFCAVFSDQSTAPVTFDRGDWE 201

[Close]

BLAST of Clc07G12940 vs. ExPASy TrEMBL
Match: A0A1S3BHN5 (ethylene-responsive transcription factor TINY OS=Cucumis melo OX=3656 GN=LOC103489964 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.3e-99
Identity = 187/203 (92.12%), Postives = 191/203 (94.09%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSESES EMKRGKQ D+EQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGE 180
           DFDS T SFS  N EEGS+ELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPF A E
Sbjct: 121 DFDSETVSFS--NGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAE 180

Query: 181 LDFCAVFSDQSTTPVTFDGGDWE 204
           +DFCAVFSDQST PVTFD GDWE
Sbjct: 181 MDFCAVFSDQSTAPVTFDRGDWE 201

[Close]

BLAST of Clc07G12940 vs. ExPASy TrEMBL
Match: A0A6J1IP61 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111479284 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.9e-92
Identity = 178/205 (86.83%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNNWNSES+  EMKRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGAEMKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFD-STTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAG 180
           DFD +TTASFSS NDE GS+ELGEIVELPNIEEDIRAESW+EFEFIDSVDWWGNPPF A 
Sbjct: 121 DFDTTTTASFSSSNDEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 ELDFCAVFSDQS-TTPVTFDGGDWE 204
           E+DFC +F+DQS TT  TF+GGDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Clc07G12940 vs. ExPASy TrEMBL
Match: A0A6J1GVC4 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111457824 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.7e-91
Identity = 176/205 (85.85%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNNWNSES+ TE+KRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFD-STTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAG 180
           DFD +TTASFSS N E GS+ELGEIVELPNIEEDIRAE+W+EFEFIDSVDWWGNPPF A 
Sbjct: 121 DFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 ELDFCAVFSDQS-TTPVTFDGGDWE 204
           E+DFC +F+DQS TT  TF+GGDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of Clc07G12940 vs. ExPASy TrEMBL
Match: A0A6J1GBC8 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111452624 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 162/203 (79.80%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 1   MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAEPNN N ESESTE+KRG        ++KH IYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNSNLESESTEIKRG--------NRKHQIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTT EMAARAHDVA LSIKGDSAK ILNFPQLAGLLPRPVSLMP DIQ AAAKAAAMV
Sbjct: 61  GTFTTPEMAARAHDVALLSIKGDSAKPILNFPQLAGLLPRPVSLMPTDIQAAAAKAAAMV 120

Query: 121 DFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGE 180
           DFDST  + SS NDEEGS+ELGEIVELPNIEE+I AES N+FE +DSVDWWGNPP+ A E
Sbjct: 121 DFDSTVPTTSSSNDEEGSDELGEIVELPNIEEEISAESLNKFELVDSVDWWGNPPYTAAE 180

Query: 181 LDFCAVFSDQSTTPVTFDGGDWE 204
            DF A FSDQ T PV FDGGDWE
Sbjct: 181 TDFFAGFSDQCTIPVIFDGGDWE 195

[Close]

BLAST of Clc07G12940 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-42
Identity = 109/193 (56.48%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 8   NSESESTEMK-----RGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGT 67
           NSES+S   K       K+T R +   KHP+YRGVR R+WGKWVSEIR+PRKKSRIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 68  FTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAM--- 127
           F T EMAARAHDVAALSIKG +  AILNFP+LA   PRPVSL PRDIQ AA KAA M   
Sbjct: 80  FPTPEMAARAHDVAALSIKGTA--AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 139

Query: 128 VDFDSTTASFSSFNDEEG--------------SEELGEIVELPNIEEDIRAES---WNEF 176
             F S+T+S SS +                  SEELGEIVELP++      +S    NEF
Sbjct: 140 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

[Close]

BLAST of Clc07G12940 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40
Identity = 104/191 (54.45%), Postives = 122/191 (63.87%), Query Frame = 0


Query: 8   NSESESTEMKRGKQTDREQRDQ------KHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLG 67
           +  ++S E    +Q + E++ +      KHP+YRGVR+R+WGKWVSEIR+PRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 68  TFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVD 127
           TF + EMAARAHDVAALSIKG  A AILNFP LAG  PRP SL PRDIQ AA KAA M  
Sbjct: 64  TFPSPEMAARAHDVAALSIKG--ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET 123

Query: 128 FDSTTAS----FSSFNDEE-----------GSEELGEIVELPNI--EEDIRAESWNEFEF 176
             S ++S    FSS                GSEELGEIVELP++    D   +  NEF F
Sbjct: 124 SQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIF 183

[Close]

BLAST of Clc07G12940 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-37
Identity = 97/189 (51.32%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 2   AEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLG 61
           A P N N+     + +R   +       +HP+YRGVR RSWGKWVSEIRQPRKK+RIWLG
Sbjct: 33  APPRNNNTR----KRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLG 92

Query: 62  TFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV- 121
           TF TA+MAARAHDVAAL+IKG S  A+LNFP+LA L PRP S  P DIQ AAA+AAAMV 
Sbjct: 93  TFVTADMAARAHDVAALTIKGSS--AVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVV 152

Query: 122 ---------DFDSTTASFSSF--NDEEGSEELGEIVELPNIEE---DIRAESWNEFEFID 176
                      ++  +S SS+   + E  E L +IVELPNIEE   D    S  +  + +
Sbjct: 153 EEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSE 212

[Close]

BLAST of Clc07G12940 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 3.0e-36
Identity = 94/182 (51.65%), Postives = 116/182 (63.74%), Query Frame = 0


Query: 22  TDREQRD-QKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSI 81
           +D+E+++  K P+YRGVR RSWGKWVSEIR+PRKKSRIWLGTF TAEMA RAHDVAA+SI
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 82  KGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFDST--------------- 141
           KG S  AILNFP+L+ LLPRPVSL PRD++ AA KAA M DFD+T               
Sbjct: 66  KGTS--AILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSN 125

Query: 142 ----------TASFS--------SFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDS 170
                     T SFS        S  +   S++L EIV+LP++   +     NEF   DS
Sbjct: 126 KMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES--NEFVIFDS 182

[Close]

BLAST of Clc07G12940 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 7.5e-35
Identity = 96/198 (48.48%), Postives = 120/198 (60.61%), Query Frame = 0


Query: 21  QTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSI 80
           +T+ ++R +  P YRGVR R+WGKWVSEIR+PRKKSRIWLGTF+T EMAARAHD AAL+I
Sbjct: 30  RTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTI 89

Query: 81  KGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD----------------- 140
           KG S  A+LNFP+LA  LPRP S  PRD+Q AAA AAAM DF                  
Sbjct: 90  KGTS--AVLNFPELATYLPRPASSSPRDVQAAAAVAAAM-DFSPSSSSLVVSDPTTVIAP 149

Query: 141 ------------STTASFSSFNDEEGS--EELGEIVELPNIEEDIRAESWNEFEFIDSVD 188
                        T++S S  ++E  S  EEL EIVELP++E     ES +EF ++DS  
Sbjct: 150 AETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDS-- 209

The following BLAST results are available for this feature:

BLAST of Clc07G12940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906604.1	8.7e-102	92.61	ethylene-responsive transcription factor TINY-like [Benincasa hispida]	[more]
XP_008447541.1	9.0e-99	92.12	PREDICTED: ethylene-responsive transcription factor TINY [Cucumis melo] >KAA0050...	[more]
XP_031737929.1	7.6e-98	91.63	ethylene-responsive transcription factor TINY-like [Cucumis sativus] >KAE8650718...	[more]
XP_022979607.1	8.1e-92	86.83	ethylene-responsive transcription factor TINY-like [Cucurbita maxima]	[more]
XP_023528290.1	5.3e-91	86.34	ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc07G12940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	6.8e-41	56.48	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	2.9e-39	54.45	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LU18	3.9e-36	51.32	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	4.3e-35	51.65	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	1.1e-33	48.48	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc07G12940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9I7	4.3e-99	92.12	Ethylene-responsive transcription factor TINY OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BHN5	4.3e-99	92.12	ethylene-responsive transcription factor TINY OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1IP61	3.9e-92	86.83	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GVC4	5.7e-91	85.85	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1GBC8	1.1e-81	79.80	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Clc07G12940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	4.8e-42	56.48	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	2.0e-40	54.45	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	2.7e-37	51.32	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	3.0e-36	51.65	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	7.5e-35	48.48	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 56..72 score: 69.52 coord: 34..45 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 33..98 e-value: 3.3E-34 score: 129.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 32..82 e-value: 9.2E-14 score: 51.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 33..92 score: 23.221937
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 32..92 e-value: 4.13875E-30 score: 103.891
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 33..93 e-value: 4.0E-24 score: 86.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..32
None	No IPR available	PANTHER	PTHR31985:SF154	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TINY-LIKE	coord: 12..197
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 12..197
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 33..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G12940.1	Clc07G12940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity