Clc07G12255 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G12255
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	LINE-1 retrotransposable element ORF2 protein
Location	ClcChr07: 27090203 .. 27092741 (-)
RNA-Seq Expression	Clc07G12255
Synteny	Clc07G12255

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCACCTTGCTGGTTTGGGGAACTACTTCAAGTAGTCCCTCCCGACACACAATGAAAAAGTTCAATAACTTCATATCCTCTTCTTGTCTAATTGATCCACCCCTTCTAAATGGCCAATTTACATGGTCCAATATGAGAAGAAATTCAGGTATTTCTAAAATCGATCGCTTCCTTTATTTGGTTGATTGGGAAAACAACTTTAAAGATCATAATGTTCGAAGGCTTCCTCGGAAAATTTTAGATCATTATCCATTAATCCTTGAATCAAAAAGTATGAAGTGGGGTCCTTGTCCCTTTAAATTCGATAAGATGGTTCACACATAAGGCCTTCGATATAGTAATTCTAAACTCTTGGTCCTCCCTCAGAGAGGATGGTCACCCGGGTCACACTTTCATAAAGAAGTTGAAGAGCTTATCGAATCAATGTAAAACTATTGAATACGAAAGTCTTTAGGAAAGAATTTGAGCAGATGGAAAGTATTACCAAGAGCATAAATGACATTGATGAGAAAGAAGAGCAAGGTCACATAACAGAGGAATAGATAAACAAACGACTGGCTGTAAATATCGATCTCCAAAACCTCTCCCTCCTCGAAGCTAGAAAATGGAAGCAACTTTGCAAATTTAAATGGCTCAAGGAAGGAGACAAAAACACTGCTTTCTTTCACAAATTGTGTTGGCTAGAAGGCGATTCAACTTTATCTCAGAAATACAAAATACCCAAGGAAATACTTTTTATGATGATGCAAAAATAGAGAAAGCTTTCATTGAGTACTTCAGTGACATATACACGGACAATGGCAGAAGAAACTGGATAATTGGCAATCTAAACTGGAGTTGTATCTACCACGTTCAAGCTGCAGATCTCATAAGAAACTTGGAAGAAAAGGAAGTTATCAGCGGCATAAACTTTCTAGCTGCAACAAAACTCCTGGACCAAATGGATTCACTATCGAATTCTTCAAAAAGTACTGGAACATTTTCAAATTTGATTGCATGAACTTGTTCCATGATTTTTTCGAGAACAACATTGTGAATAAATCTGTAAACGCTACTTACATTGGTCTTATTCCAAAAAAATCTGTGTCACAAAAGGTATCCGACTACAAACCTATCAGTTTGACTACAAGCATGTACAAAATCCTTGCCAAAGTCGCTGCGCACTTAAAGCTTGTTCTTCCTTCCACCATTGCTGCTAACCAAGCAGCCTTTATTAAAGGTAGACAAATTTCCAATCCCATTTTAATTGCTAATGAAATTGTTGACTATTGGAGATGTAGTAAGAAAAAAGTTGTCATTTTCAAGCTTGATATTGAGAAGGCTTTCGATAAAATAAGTTGGGACTTCCTCCTATCCATCTTGATCTTGAAAGGCTTTCTGGATAGATGAATTCGTTGGATTAAAGGGTGTATCTCTTCTGCATCATTTTCTATTCTTATCAATGGTAAACTGAGAGGATTCATACAAGCTACAAGGGGTATCAGACAAGGTGCCCATTATCCCCATTCTTATTCGTTATTGCCATGGACTATCTCTCAAGACCTCTTGTGTTAAGCTCAACAAGATGGAATCATCAAAGGATACACTGGTCAATATAAAGATGTCCAAGTTAATCACTTGCTCTTTGTCGATGACATTCTCCTCTTTTCATAGGCAGATCCTATATATATCAAAAACCTGCACCATCCGATAAAATATTTTGAGATAGCCTCGAGCCTAAGCATCAATCTGCAGAAATCAAATTTCGTGGGAATAAATCTAGAGCCACAATCGATTAATGAAATTGAGAGAATTTGGGGTTGCCACGCTACAAAAATTCTGTTACATTATCTGGGGATGCCTCTTGGTGGAAATCCCAAAGTATCATCTTTTTGGGACCCTGTTGTTGAGAAGATAGATAAAAAACTAAGTTCATGGAGATTTTCCTATTTATCAAAAGGGGGTAGATTGACCCTTGCTAAAGCCGTCCTTAGTAATCTTCCTACCTACTTTCTGTCTACCTTCAAGGCACCTATGAAAGTTACACATGAGGAATTTTCTATGGGAAGGTACGGAAAAATCTGTTGGTGCTCATTTTGTTAGATGGAATCTGGTTACTAGGCCAAAGGAAAGGGGAGGCCTAGGCATCGACAAAATTAACCTCTCCAATGTAGCACTCTTGGCCAAATGAATATGGAGGTTCCTTGAGGAATCTGATGATCTATGGAAGAAGGTGATTGAAGGTAAATATTTGTCGGATTCCATGGTTGGAATTCCTAACAAATGTAATAACACTAGCATGAGAGCTCCTTGGTTTCATATATGCAAGCTGAGCCACCACATCATTGAGAATTCAAGATGGAAAGCAAATAGCGGCAATAAAACTCTTTTTTGGTATCATAATTGGACAGGTTTAGGTCCCTTGCATCAGCTCCTCCCTCGATTCTTTGCTATGTCATCAAACACCATCCTTACTGTCAAAGAGGCATGGAATCCCAATGAAGCAAAGTGGAATTTCTTTCCAGTGCAGATTGCTGAGAGAAAGAGAAATCTGTGA

mRNA sequence

ATGTTCACCTTGCTGGTTTGGGGAACTACTTCAAGTAGTCCCTCCCGACACACAATGAAAAAGTTCAATAACTTCATATCCTCTTCTTGTCTAATTGATCCACCCCTTCTAAATGGCCAATTTACATGGTCCAATATGAGAAGAAATTCAGGTATTTCTAAAATCGATCGCTTCCTTTATTTGGTTGATTGGGAAAACAACTTTAAAGATCATAATGTTCGAAGGCTTCCTCGGAAAATTTTAGATCATTATCCATTAATCCTTGAATCAAAAAGTATGAAGTGGGGTCCTTGTCCCTTTAAATTCGATAAGATGGCCTTCGATATAGTAATTCTAAACTCTTGGTCCTCCCTCAGAGAGGATGGTCACCCGGTCTTTAGGAAAGAATTTGAGCAGATGGAAAGTATTACCAAGAGCATAAATGACATTGATGAGAAAGAAGAGCAAGGTTTAGGTCCCTTGCATCAGCTCCTCCCTCGATTCTTTGCTATGTCATCAAACACCATCCTTACTGTCAAAGAGGCATGGAATCCCAATGAAGCAAAGTGGAATTTCTTTCCAGTGCAGATTGCTGAGAGAAAGAGAAATCTGTGA

Coding sequence (CDS)

ATGTTCACCTTGCTGGTTTGGGGAACTACTTCAAGTAGTCCCTCCCGACACACAATGAAAAAGTTCAATAACTTCATATCCTCTTCTTGTCTAATTGATCCACCCCTTCTAAATGGCCAATTTACATGGTCCAATATGAGAAGAAATTCAGGTATTTCTAAAATCGATCGCTTCCTTTATTTGGTTGATTGGGAAAACAACTTTAAAGATCATAATGTTCGAAGGCTTCCTCGGAAAATTTTAGATCATTATCCATTAATCCTTGAATCAAAAAGTATGAAGTGGGGTCCTTGTCCCTTTAAATTCGATAAGATGGCCTTCGATATAGTAATTCTAAACTCTTGGTCCTCCCTCAGAGAGGATGGTCACCCGGTCTTTAGGAAAGAATTTGAGCAGATGGAAAGTATTACCAAGAGCATAAATGACATTGATGAGAAAGAAGAGCAAGGTTTAGGTCCCTTGCATCAGCTCCTCCCTCGATTCTTTGCTATGTCATCAAACACCATCCTTACTGTCAAAGAGGCATGGAATCCCAATGAAGCAAAGTGGAATTTCTTTCCAGTGCAGATTGCTGAGAGAAAGAGAAATCTGTGA

Protein sequence

MFTLLVWGTTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNFKDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMAFDIVILNSWSSLREDGHPVFRKEFEQMESITKSINDIDEKEEQGLGPLHQLLPRFFAMSSNTILTVKEAWNPNEAKWNFFPVQIAERKRNL

Homology

[Close]

BLAST of Clc07G12255 vs. NCBI nr
Match: TYK06777.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 8.9e-27
Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 9   TTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 68
           T++ +PS+H+M+ FN FI+ S LIDPPL N +FTWSN+R +  +S+IDRFLY  +WEN F
Sbjct: 81  TSAQNPSKHSMRCFNKFIADSNLIDPPLSNAKFTWSNLRVHPVLSRIDRFLYTTNWENLF 140

Query: 69  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMA-----FDIVILNSWSSLREDGH 128
             H  + L R   DH+P++LES  + WGP PFK   +      F   I N W +LR++GH
Sbjct: 141 TAHYSKTLSRVTSDHFPIVLESSLISWGPSPFKLINVHLKEPWFKNNITNWWKNLRQEGH 200

Query: 129 P--VFRKEFEQMESITKS 140
           P   F ++ +Q+ +I ++
Sbjct: 201 PGFSFMRKLKQLSTIIRN 218

[Close]

BLAST of Clc07G12255 vs. NCBI nr
Match: TYK24536.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-26
Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 9   TTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 68
           T++ +PS+H+M+ FN FIS S LIDPPL N +FTWSN+R    +S+IDRFLY  +WEN F
Sbjct: 81  TSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTANWENLF 140

Query: 69  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMA-----FDIVILNSWSSLREDGH 128
             H  + L R   DH+P+ LES  + WGP PFKF  +      F   +   W +LR+ GH
Sbjct: 141 TAHYSKTLSRVTSDHFPIALESSMISWGPSPFKFINVHLKEPWFKKNVTIWWKNLRQGGH 200

Query: 129 P--VFRKEFEQMESI-------TKSINDIDEK 147
           P   F K+ +Q+ +I        K  ND ++K
Sbjct: 201 PGFSFMKKLKQLSAIIRDEQKKNKCYNDEEKK 232

[Close]

BLAST of Clc07G12255 vs. NCBI nr
Match: KAA0040038.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-25
Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 9   TTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 68
           T++ +PS+H+M+ FN FIS S LIDPPL N +FTWSN+R    +S+IDRFLY  +WEN F
Sbjct: 81  TSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTTNWENLF 140

Query: 69  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMAFDIVILNS-----WSSLREDGH 128
             H  + L R   DH+P+ LES  + WGP PFK   +      L       W +LR++GH
Sbjct: 141 TAHYSKTLSRVTSDHFPIALESSMISWGPSPFKLINVHLKESWLKKNVTYWWKNLRQEGH 200

Query: 129 P--VFRKEFEQMESITKS 140
           P   F ++ +Q+ +I ++
Sbjct: 201 PGFSFMRKLKQLSAIIRN 218

[Close]

BLAST of Clc07G12255 vs. NCBI nr
Match: KAA0044334.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-25
Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 10  TSSSPSRH-TMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 69
           TS+   RH +M+KFNNFIS S LIDPPL N ++TWSN+R    +S+IDRFLY V WEN F
Sbjct: 81  TSAQNLRHYSMRKFNNFISDSNLIDPPLSNAKYTWSNLRAQPILSRIDRFLYTVGWENLF 140

Query: 70  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFK-----FDKMAFDIVILNSWSSLREDGH 127
             H  + L R   DH+P+ILES ++ WGP PF+       +  F     + W++LR+DGH
Sbjct: 141 TAHYSKTLSRVTSDHFPIILESSTISWGPLPFRLINVHLKESWFKNNFRSWWNNLRQDGH 200

[Close]

BLAST of Clc07G12255 vs. NCBI nr
Match: TYK10356.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 19  MKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNFKDHNVRRLPR 78
           M+KFN FIS S LIDPPL N ++TWSN++    +S+IDRFLY  DWEN F  H  + L R
Sbjct: 1   MRKFNKFISDSNLIDPPLSNAKYTWSNLKAQPILSRIDRFLYTADWENLFTAHYSKTLSR 60

Query: 79  KILDHYPLILESKSMKWGPCPFKFDKMA-----FDIVILNSWSSLREDGHPVFRKEFEQM 138
              DH+P++LES ++ WGP PFK   +      F   I N W++LR +GHP F    +++
Sbjct: 61  VTSDHFPIVLESSTISWGPLPFKLINVHLKEPWFKNNIRNWWNNLRHEGHPGF-SFMKKL 120

Query: 139 ESITKSINDIDEKEEQ 150
           ++++  I D  +K  +
Sbjct: 121 KNLSVIIRDEQKKNNR 135

[Close]

BLAST of Clc07G12255 vs. ExPASy TrEMBL
Match: A0A5D3C4J1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00790 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.3e-27
Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 9   TTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 68
           T++ +PS+H+M+ FN FI+ S LIDPPL N +FTWSN+R +  +S+IDRFLY  +WEN F
Sbjct: 81  TSAQNPSKHSMRCFNKFIADSNLIDPPLSNAKFTWSNLRVHPVLSRIDRFLYTTNWENLF 140

Query: 69  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMA-----FDIVILNSWSSLREDGH 128
             H  + L R   DH+P++LES  + WGP PFK   +      F   I N W +LR++GH
Sbjct: 141 TAHYSKTLSRVTSDHFPIVLESSLISWGPSPFKLINVHLKEPWFKNNITNWWKNLRQEGH 200

Query: 129 P--VFRKEFEQMESITKS 140
           P   F ++ +Q+ +I ++
Sbjct: 201 PGFSFMRKLKQLSTIIRN 218

[Close]

BLAST of Clc07G12255 vs. ExPASy TrEMBL
Match: A0A5D3DLM2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00780 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-26
Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 9   TTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 68
           T++ +PS+H+M+ FN FIS S LIDPPL N +FTWSN+R    +S+IDRFLY  +WEN F
Sbjct: 81  TSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTANWENLF 140

Query: 69  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMA-----FDIVILNSWSSLREDGH 128
             H  + L R   DH+P+ LES  + WGP PFKF  +      F   +   W +LR+ GH
Sbjct: 141 TAHYSKTLSRVTSDHFPIALESSMISWGPSPFKFINVHLKEPWFKKNVTIWWKNLRQGGH 200

Query: 129 P--VFRKEFEQMESI-------TKSINDIDEK 147
           P   F K+ +Q+ +I        K  ND ++K
Sbjct: 201 PGFSFMKKLKQLSAIIRDEQKKNKCYNDEEKK 232

[Close]

BLAST of Clc07G12255 vs. ExPASy TrEMBL
Match: A0A5A7TAQ1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00050 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 8.1e-26
Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = 0


Query: 9   TTSSSPSRHTMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 68
           T++ +PS+H+M+ FN FIS S LIDPPL N +FTWSN+R    +S+IDRFLY  +WEN F
Sbjct: 81  TSTQNPSKHSMRCFNKFISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTTNWENLF 140

Query: 69  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFKFDKMAFDIVILNS-----WSSLREDGH 128
             H  + L R   DH+P+ LES  + WGP PFK   +      L       W +LR++GH
Sbjct: 141 TAHYSKTLSRVTSDHFPIALESSMISWGPSPFKLINVHLKESWLKKNVTYWWKNLRQEGH 200

Query: 129 P--VFRKEFEQMESITKS 140
           P   F ++ +Q+ +I ++
Sbjct: 201 PGFSFMRKLKQLSAIIRN 218

[Close]

BLAST of Clc07G12255 vs. ExPASy TrEMBL
Match: A0A5A7TMG5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00580 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 10  TSSSPSRH-TMKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNF 69
           TS+   RH +M+KFNNFIS S LIDPPL N ++TWSN+R    +S+IDRFLY V WEN F
Sbjct: 81  TSAQNLRHYSMRKFNNFISDSNLIDPPLSNAKYTWSNLRAQPILSRIDRFLYTVGWENLF 140

Query: 70  KDHNVRRLPRKILDHYPLILESKSMKWGPCPFK-----FDKMAFDIVILNSWSSLREDGH 127
             H  + L R   DH+P+ILES ++ WGP PF+       +  F     + W++LR+DGH
Sbjct: 141 TAHYSKTLSRVTSDHFPIILESSTISWGPLPFRLINVHLKESWFKNNFRSWWNNLRQDGH 200

[Close]

BLAST of Clc07G12255 vs. ExPASy TrEMBL
Match: A0A5D3CJ08 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00340 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.9e-25
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 19  MKKFNNFISSSCLIDPPLLNGQFTWSNMRRNSGISKIDRFLYLVDWENNFKDHNVRRLPR 78
           M+KFN FIS S LIDPPL N ++TWSN++    +S+IDRFLY  DWEN F  H  + L R
Sbjct: 1   MRKFNKFISDSNLIDPPLSNAKYTWSNLKAQPILSRIDRFLYTADWENLFTAHYSKTLSR 60

Query: 79  KILDHYPLILESKSMKWGPCPFKFDKMA-----FDIVILNSWSSLREDGHPVFRKEFEQM 138
              DH+P++LES ++ WGP PFK   +      F   I N W++LR +GHP F    +++
Sbjct: 61  VTSDHFPIVLESSTISWGPLPFKLINVHLKEPWFKNNIRNWWNNLRHEGHPGF-SFMKKL 120

Query: 139 ESITKSINDIDEKEEQ 150
           ++++  I D  +K  +
Sbjct: 121 KNLSVIIRDEQKKNNR 135

The following BLAST results are available for this feature:

BLAST of Clc07G12255 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK06777.1	8.9e-27	44.20	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK24536.1	2.6e-26	43.42	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0040038.1	1.7e-25	43.48	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0044334.1	2.9e-25	49.59	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK10356.1	1.4e-24	43.38	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]

BLAST of Clc07G12255 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc07G12255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4J1	4.3e-27	44.20	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3DLM2	1.3e-26	43.42	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TAQ1	8.1e-26	43.48	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TMG5	1.4e-25	49.59	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3CJ08	6.9e-25	43.38	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Clc07G12255 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 6..89 e-value: 2.6E-8 score: 35.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 15..89
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 18..105
None	No IPR available	PANTHER	PTHR33710:SF32	SUBFAMILY NOT NAMED	coord: 18..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G12255.1	Clc07G12255.1	mRNA