Clc07G12220 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G12220
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Location	ClcChr07: 27047613 .. 27048789 (-)
RNA-Seq Expression	Clc07G12220
Synteny	Clc07G12220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAATCAAATTCTTTGTCTTGCAGGCTGTAAGGTTCGTAGTACTCTTGCACATAACATTTTTGGTGAATTCCGTATGTCATATATGGGAAAACGACCTTGGAAAACAAACGATTTGTCAACAAACAATTGGTAATTTTCTTTTTCTTTCTCTCTTCCTTTAGTATGTGAGATATTATTAAAATTGTTCATTACATTTTTCTTTTTTTTTTTTAAATCTAAATTTAGATCACTGTGAAGTAACATAAAATTCTTTTATTTCAGAATAATTGCATACAACTTGACTTTTAACTAAAGAGAATGAGGTTTAAACTATCGAGCTATATTTTTGTTAGCTACACAACTTTTCATACATGGTGGCTAGTACATATACATATATATTTTTAAGCATATAAAGATTGCAAAATTCAAAACCCGTTGAATGCGAAGATTCAAATTTATAACCTTTTTATTGTAGGAATATGTCTAAACCCATTAAGTTGGTGTTCAAATTAGCCTAAACATAAATGAAATTCGATAAAGCTTAACTTTGATTATTATATTTTATATTTAGCATAAAATTAAAATGCGTTTTTTTTCAACGTTTATGTTTTGAATATAAATTGATTTATTAATTAAAGAAATTTATAGTTATTGAAATCTACTCAATGATTTTGCAAATGAAGTTCATAATTTAAAAAATAGTTGATATATAATTTTTTTTAAGAACTAAAAGAAATTAGTAGATGCATCGAAATATCCTTAGTACCCTCATCTTATTCAAACCAAAACTAAAAGATGGTTCAAAACTAGTTGATATATAGTTTTAAACACACCCATTGTTTTTCTAAAAAAAACACCTATTGCTTATTTTGATTAATTATTTATGTAGCTTTGTATTTTTCTATTGGTTTTATTGATTAACCTTTTCTCTTCTTTTAATTAGGTGGGTGGGTTTAGTTTCATTTGGAGAAGGTTGGCACAATAATCACCATGCCTTTGAATATTCAGCTAGACATGGGCTTGAATGGTGGGAAATTGACTTTGGTTGGTATGTTATTATATTTCTTCAAGCCATTGGAGTAGCCACTAACGTCAAAGTACCTTCTCAAACCCACAAGAAGAAGTTGGCGATGGATGAAAAAAAAAATCATATGAAAGCCTTCCAAAGTGATATCCTTTTACATAGGGATTAA

mRNA sequence

ATGAGAAATCAAATTCTTTGTCTTGCAGGCTGTAAGGTTCGTAGTACTCTTGCACATAACATTTTTGGTGAATTCCGTATGTCATATATGGGAAAACGACCTTGGAAAACAAACGATTTGTCAACAAACAATTGGAATATGTCTAAACCCATTAAGTGGGTGGGTTTAGTTTCATTTGGAGAAGGTTGGCACAATAATCACCATGCCTTTGAATATTCAGCTAGACATGGGCTTGAATGGTGGGAAATTGACTTTGGTTGGTATGTTATTATATTTCTTCAAGCCATTGGAGTAGCCACTAACGTCAAAGTACCTTCTCAAACCCACAAGAAGAAGTTGGCGATGGATGAAAAAAAAAATCATATGAAAGCCTTCCAAAGTGATATCCTTTTACATAGGGATTAA

Coding sequence (CDS)

ATGAGAAATCAAATTCTTTGTCTTGCAGGCTGTAAGGTTCGTAGTACTCTTGCACATAACATTTTTGGTGAATTCCGTATGTCATATATGGGAAAACGACCTTGGAAAACAAACGATTTGTCAACAAACAATTGGAATATGTCTAAACCCATTAAGTGGGTGGGTTTAGTTTCATTTGGAGAAGGTTGGCACAATAATCACCATGCCTTTGAATATTCAGCTAGACATGGGCTTGAATGGTGGGAAATTGACTTTGGTTGGTATGTTATTATATTTCTTCAAGCCATTGGAGTAGCCACTAACGTCAAAGTACCTTCTCAAACCCACAAGAAGAAGTTGGCGATGGATGAAAAAAAAAATCATATGAAAGCCTTCCAAAGTGATATCCTTTTACATAGGGATTAA

Protein sequence

MRNQILCLAGCKVRSTLAHNIFGEFRMSYMGKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVIIFLQAIGVATNVKVPSQTHKKKLAMDEKKNHMKAFQSDILLHRD

Homology

[Close]

BLAST of Clc07G12220 vs. NCBI nr
Match: XP_011652978.2 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus] >KAE8649060.1 hypothetical protein Csa_015380 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 8.7e-34
Identity = 72/89 (80.90%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+ WKTNDLSTNNW        VGL+ FGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI
Sbjct: 240 GKQLWKTNDLSTNNW-------LVGLLGFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 299

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKK 120
           +FLQAIGVAT+VKVP Q HKKKLAMDE K
Sbjct: 300 MFLQAIGVATHVKVPLQHHKKKLAMDETK 321

[Close]

BLAST of Clc07G12220 vs. NCBI nr
Match: XP_022153632.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia] >XP_022153633.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-32
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+PW+T DLS NNW       WV LVSFGEGWHNNHHAFEYSARHG+EWW+IDFGWYV+
Sbjct: 259 GKQPWRTGDLSRNNW-------WVSLVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVV 318

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKK 120
           +FL+AIG+ATNVKVPSQ  K+KLA+D  K
Sbjct: 319 MFLEAIGIATNVKVPSQNQKQKLAIDAPK 340

[Close]

BLAST of Clc07G12220 vs. NCBI nr
Match: XP_038903351.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida] >XP_038903358.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 17  LAHNIFGEFRMSYM-GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSAR 76
           L H+ F      +M GK+PWKTND STNNW       W+ L++FGEGWHNNHHAFEYSAR
Sbjct: 205 LLHSTFMVNSFCHMWGKQPWKTNDFSTNNW-------WMSLLAFGEGWHNNHHAFEYSAR 264

Query: 77  HGLEWWEIDFGWYVIIFLQAIGVATNVKVPSQTHKKKLAMDE 118
            G+EWW+ D GWYVI+FLQAIGVATNVKVPSQ+HK+KLA D+
Sbjct: 265 MGIEWWQFDLGWYVIVFLQAIGVATNVKVPSQSHKQKLAKDK 299

[Close]

BLAST of Clc07G12220 vs. NCBI nr
Match: XP_038903333.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 17  LAHNIFGEFRMSYM-GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSAR 76
           L H+ F      +M GK+PWKTND STNNW       W+ L++FGEGWHNNHHAFEYSAR
Sbjct: 197 LLHSTFMVNSFCHMWGKQPWKTNDFSTNNW-------WMSLLAFGEGWHNNHHAFEYSAR 256

Query: 77  HGLEWWEIDFGWYVIIFLQAIGVATNVKVPSQTHKKKLAMDE 118
            G+EWW+ D GWYVI+FLQAIGVATNVKVPSQ+HK+KLA D+
Sbjct: 257 MGIEWWQFDLGWYVIVFLQAIGVATNVKVPSQSHKQKLAKDK 291

[Close]

BLAST of Clc07G12220 vs. NCBI nr
Match: XP_038903746.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-30
Identity = 62/90 (68.89%), Postives = 75/90 (83.33%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G R W T+DLSTNNW       W+ L+SFG+GWHNNHHAFEYSARHGLEWW+IDF WYVI
Sbjct: 238 GTRQWNTSDLSTNNW-------WLSLLSFGDGWHNNHHAFEYSARHGLEWWQIDFSWYVI 297

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKKN 121
           +FLQAIGVAT VK+P+Q+HK++LAM + K+
Sbjct: 298 MFLQAIGVATEVKLPTQSHKERLAMHKLKD 320

[Close]

BLAST of Clc07G12220 vs. ExPASy Swiss-Prot
Match: Q949X0 (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-28
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+ W T DLS NNW       WV  ++FGEGWHNNHHAFE+SARHGLEWW++D  WYV+
Sbjct: 291 GKQAWNTGDLSKNNW-------WVAALAFGEGWHNNHHAFEFSARHGLEWWQLDMTWYVV 350

Query: 91  IFLQAIGVATNVKVPSQTHKKKLA 115
            FLQAIG+AT+VK+PS+  K+++A
Sbjct: 351 KFLQAIGLATDVKLPSEAQKQRMA 367

[Close]

BLAST of Clc07G12220 vs. ExPASy Swiss-Prot
Match: P0DOW2 (Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.3e-27
Identity = 49/84 (58.33%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G RPW T DLSTNNW       ++ +++ GEGWHNNHHAFEYSARHG+EWW+ID  WY+I
Sbjct: 233 GNRPWNTGDLSTNNW-------FIAMLTSGEGWHNNHHAFEYSARHGIEWWQIDTTWYII 292

Query: 91  IFLQAIGVATNVKVPSQTHKKKLA 115
             L+ +G+AT++KVPS+ HK+K++
Sbjct: 293 KLLEYLGLATDIKVPSEIHKRKMS 309

[Close]

BLAST of Clc07G12220 vs. ExPASy Swiss-Prot
Match: Q9FV68 (Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii OX=28973 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 56/83 (67.47%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G RPW T DLSTNN        +V L +FGEGWHNNHHAFE SARHGLEWWEID  WYVI
Sbjct: 276 GGRPWNTGDLSTNN-------MFVALCAFGEGWHNNHHAFEQSARHGLEWWEIDVTWYVI 335

Query: 91  IFLQAIGVATNVKVPSQTHKKKL 114
             LQAIG+ATNVK+P++  K+KL
Sbjct: 336 RTLQAIGLATNVKLPTEAQKQKL 351

[Close]

BLAST of Clc07G12220 vs. ExPASy Swiss-Prot
Match: P0DOW3 (Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G + W T DLSTNNW       ++ +++ GEGWHNNHHAFEYSARHG+EWW+ID  WYVI
Sbjct: 230 GHQAWDTGDLSTNNW-------FIAMLTSGEGWHNNHHAFEYSARHGIEWWQIDTTWYVI 289

Query: 91  IFLQAIGVATNVKVPSQTHKKKLA 115
             L+ +G+AT+VKVPS+ HK+K++
Sbjct: 290 KLLEYLGLATDVKVPSEVHKRKMS 306

[Close]

BLAST of Clc07G12220 vs. ExPASy Swiss-Prot
Match: Q9LVZ3 (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3.2 PE=2 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 3.4e-25
Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G R W T+D S NNW       WV +++ GEGWHNNHHAFE+SARHGLEWW++D  W +I
Sbjct: 283 GTRAWNTSDFSKNNW-------WVAILTLGEGWHNNHHAFEFSARHGLEWWQLDITWCLI 342

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAM 116
            FL+AIG+ATNVK+P++T  K  A+
Sbjct: 343 RFLEAIGLATNVKLPTETQMKGKAL 360

[Close]

BLAST of Clc07G12220 vs. ExPASy TrEMBL
Match: A0A0A0KYG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006080 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.2e-34
Identity = 72/89 (80.90%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+ WKTNDLSTNNW        VGL+ FGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI
Sbjct: 10  GKQLWKTNDLSTNNW-------LVGLLGFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 69

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKK 120
           +FLQAIGVAT+VKVP Q HKKKLAMDE K
Sbjct: 70  MFLQAIGVATHVKVPLQHHKKKLAMDETK 91

[Close]

BLAST of Clc07G12220 vs. ExPASy TrEMBL
Match: A0A6J1DHZ7 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021091 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.1e-33
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+PW+T DLS NNW       WV LVSFGEGWHNNHHAFEYSARHG+EWW+IDFGWYV+
Sbjct: 259 GKQPWRTGDLSRNNW-------WVSLVSFGEGWHNNHHAFEYSARHGIEWWQIDFGWYVV 318

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKK 120
           +FL+AIG+ATNVKVPSQ  K+KLA+D  K
Sbjct: 319 MFLEAIGIATNVKVPSQNQKQKLAIDAPK 340

[Close]

BLAST of Clc07G12220 vs. ExPASy TrEMBL
Match: A0A6J1GV18 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457790 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.7e-30
Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+PWKTNDLSTNNW MS        ++FGEGWHNNHHAFEYSAR G+EWW+ D GWYVI
Sbjct: 220 GKQPWKTNDLSTNNWCMS-------FLAFGEGWHNNHHAFEYSARMGIEWWQYDPGWYVI 279

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKK 120
           +FLQAIGVAT+VK+PS+THKKKLA +  K
Sbjct: 280 VFLQAIGVATHVKLPSETHKKKLAKEYLK 301

[Close]

BLAST of Clc07G12220 vs. ExPASy TrEMBL
Match: A0A6J1GWJ3 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457797 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.8e-30
Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GKRPWKTNDLS NNW       WV L+ FGEGWHNNHHAFEYSAR G+EWW+ D GWYVI
Sbjct: 212 GKRPWKTNDLSRNNW-------WVSLLLFGEGWHNNHHAFEYSARMGIEWWQYDPGWYVI 271

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMD 117
            FLQAIGVAT+VK+PSQTH +KLA D
Sbjct: 272 RFLQAIGVATHVKLPSQTHMQKLAND 290

[Close]

BLAST of Clc07G12220 vs. ExPASy TrEMBL
Match: A0A6J1E0E4 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111024778 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.2e-30
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+PWK  DLS NN        WVGL+ FGEGWHNNHHAFEYSAR GLEWW+IDFGWYVI
Sbjct: 234 GKQPWKNGDLSRNN-------GWVGLLGFGEGWHNNHHAFEYSARFGLEWWQIDFGWYVI 293

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAMDEKKNHMK 124
             LQAIGVATNVKVPSQ+HK++L    +K+ +K
Sbjct: 294 RLLQAIGVATNVKVPSQSHKQRLGTTNQKDMLK 319

[Close]

BLAST of Clc07G12220 vs. TAIR 10
Match: AT3G15850.1 (fatty acid desaturase 5 )

HSP 1 Score: 124.8 bits (312), Expect = 5.3e-29
Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           GK+ W T DLS NNW       WV  ++FGEGWHNNHHAFE+SARHGLEWW++D  WYV+
Sbjct: 291 GKQAWNTGDLSKNNW-------WVAALAFGEGWHNNHHAFEFSARHGLEWWQLDMTWYVV 350

Query: 91  IFLQAIGVATNVKVPSQTHKKKLA 115
            FLQAIG+AT+VK+PS+  K+++A
Sbjct: 351 KFLQAIGLATDVKLPSEAQKQRMA 367

[Close]

BLAST of Clc07G12220 vs. TAIR 10
Match: AT3G15870.1 (Fatty acid desaturase family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G R W T+D S NNW       WV +++ GEGWHNNHHAFE+SARHGLEWW++D  W +I
Sbjct: 283 GTRAWNTSDFSKNNW-------WVAILTLGEGWHNNHHAFEFSARHGLEWWQLDITWCLI 342

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAM 116
            FL+AIG+ATNVK+P++T  K  A+
Sbjct: 343 RFLEAIGLATNVKLPTETQMKGKAL 360

[Close]

BLAST of Clc07G12220 vs. TAIR 10
Match: AT1G06080.1 (delta 9 desaturase 1 )

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-26
Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G R WKTND S N W       W+ + SFGE WHNNHHAFE SAR GLEWW+ID  WY++
Sbjct: 226 GSRTWKTNDTSRNVW-------WLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIV 285

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAM 116
            FL+ IG+AT+VK+PS++ ++++AM
Sbjct: 286 RFLEIIGLATDVKLPSESQRRRMAM 303

[Close]

BLAST of Clc07G12220 vs. TAIR 10
Match: AT2G31360.1 (16:0delta9 desaturase 2 )

HSP 1 Score: 111.7 bits (278), Expect = 4.6e-25
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G R WKTND S N W       W+ + SFGE WHNNHHAFE SAR GLEWW+ID  WY++
Sbjct: 228 GTRTWKTNDTSRNVW-------WLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIV 287

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAM 116
            F + IG+AT+VKVP++  ++++A+
Sbjct: 288 RFFEIIGLATDVKVPTEAQRRRMAI 305

[Close]

BLAST of Clc07G12220 vs. TAIR 10
Match: AT1G06100.1 (Fatty acid desaturase family protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-24
Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 31  GKRPWKTNDLSTNNWNMSKPIKWVGLVSFGEGWHNNHHAFEYSARHGLEWWEIDFGWYVI 90
           G + W+TND S N W       W+ L++ GE WHNNHHAFE SARHGLEW+++D  WY+I
Sbjct: 220 GSQAWQTNDTSRNVW-------WLALLTMGESWHNNHHAFETSARHGLEWYQLDITWYLI 279

Query: 91  IFLQAIGVATNVKVPSQTHKKKLAM 116
            F QA+G+ATNVK+P+   K+K+A+
Sbjct: 280 WFFQALGLATNVKLPTDAQKRKMAI 297

The following BLAST results are available for this feature:

BLAST of Clc07G12220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652978.2	8.7e-34	80.90	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumi...	[more]
XP_022153632.1	1.3e-32	73.03	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [M...	[more]
XP_038903351.1	1.6e-32	66.67	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [B...	[more]
XP_038903333.1	1.6e-32	66.67	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [B...	[more]
XP_038903746.1	3.4e-30	68.89	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [B...	[more]

BLAST of Clc07G12220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949X0	7.4e-28	61.90	Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arab...	[more]
P0DOW2	6.3e-27	58.33	Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1	[more]
Q9FV68	1.8e-26	67.47	Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii OX=28973 PE=1 SV=1	[more]
P0DOW3	1.2e-25	58.33	Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1	[more]
Q9LVZ3	3.4e-25	57.65	Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc07G12220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYG9	4.2e-34	80.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006080 PE=3 SV=1	[more]
A0A6J1DHZ7	6.1e-33	73.03	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A6J1GV18	3.7e-30	71.91	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A6J1GWJ3	4.8e-30	74.42	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]
A0A6J1E0E4	8.2e-30	68.82	palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS...	[more]

BLAST of Clc07G12220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15850.1	5.3e-29	61.90	fatty acid desaturase 5	[more]
AT3G15870.1	2.5e-26	57.65	Fatty acid desaturase family protein	[more]
AT1G06080.1	3.2e-26	56.47	delta 9 desaturase 1	[more]
AT2G31360.1	4.6e-25	54.12	16:0delta9 desaturase 2	[more]
AT1G06100.1	1.8e-24	54.12	Fatty acid desaturase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015876	Acyl-CoA desaturase	PANTHER	PTHR11351	ACYL-COA DESATURASE	coord: 29..122
None	No IPR available	PANTHER	PTHR11351:SF85	16:0DELTA9 DESATURASE 2-RELATED	coord: 29..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G12220.2	Clc07G12220.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water