Clc07G12190 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACCTAGTAAGTGATACACATCTATTTAGCAATAAAGATTTGAAATGGCTATCAATGATAGAAAAGAAGTTGTAGCTTAGTTTCTTTCATATTGTCTTGCACCATATCTCTATATTTTGGGCTTAAATCTTTGTGACTTTGCTTTTGGAACTTCCACAAAAGGTCTCATGTGCCAATACACATCATTGTTCTCACAATAAACCATAGATCTCTCATTTCTCTATTTGCACCTAATCAATATGGAACTTTGTTTGTACCAAACAAATCCTCCTCTCGAACAACATACTTACCACCTTGGGTCTCCTCTTATCCATTCATTCCCGCCCTGCTATTTTTTATTCAACGGCTACAAAATCAACAATTCCATGAGCTTCCCTTTCCATGTCTTGGGATACAACCCATAAGAGTTTGCATGTTTTTTGTACTAAACCCTTGTGATGGTTTCACACAGCTTCAGTAGTTATTCTGCTTCCAGAATAAATTCTTCCGTTTGTGCCTCGTAAAAAAAACTAGCAGGTGGGCCTACGAGAACTTGTATCGATATCCACATATATTCTAAAAATATTTGTGAAAATATTATTAAAAATATATCTATCAATGTAAAAATAAAGCCGATATTTATGAAAATAGGTTTCCTGTCTCCCCAACAACTTTGTTCCTGGATCTCATTGGTTAGAAATTAAAATAAAACCTTTAACCATAGATAAGTAATAAATATTTTTATCTACCACCCTAGGTTTTTTGAATATTTTTTCTTGTCCTCATAGTTCATCAATTAAATTTTTTTGCAGCTACCTCGGCGTCCATTAATAAAATTATATCGTCCTATGTAAGAAACTATATTACTCAAGCTTGAAATGCGATATAAATACATATGCCATAGGGGAAGGTAGTGAAAACCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTGCCCATGATGCAAAAACAAGAATCAAAGGCAATTTTGAAAACCCCAAGGTCATTTATGAGGAGAAAATGGACGAAGCTGGACAAAATCATTTCATTTTCTATTTTCATTCTCCATATTCTTTGTGTTTTTGCACTATTTCATTTTAATTGGCGTGCATTTTGGGTTGCCTTTGCATTCTATATTATTACAGGCTTAAGCATCAGTATTTCATATCATAGAAATCTCGCACATAAGAGTTTCAAGCTCCCTAAACGACTTGAATACTTTTTGGCTTATTGTGCAGCTCATGCACTCCAGGTTTGACATATGCTCCGTTCTTAATCTCTTTTTATGTTTTTCAAGATATTAACACTTTAATATATACCTATTTTGTCCACTTAGTTGTTTTTCTATATTTTTAGGGTGATCCAATTGATTGGGTGAGTACACATAGATGTCATCATCAATTTGTCGATACGGAAAGAGATCCACATAGTCCTATCCAAGAATTTTGGTTTAGTCATATCACTTGACTTTTTGATTCGTATAATTTGACCAAAAAAGTTTGTCCAAAATATTTTACCAATTTTCAAAAGATTGAAAGAAGCATATTTATATGGTTCTCGAAGCATGGGAGACCCGACAACGTTCGTGATTTGGAGAAGCAAAGCTTCTATAGGTTTATCCATAAAACATATTTTCTTCATCACATTGCTCTTGCGGTCCTACTCTATCAACTTGGAGGACTTCCATTCTTTATATGGGGCACGGTAAAGTTTCATTTATATATATTTTTTCTTATTTGACGTCCTTTCTATTTGCTTTTAAATTAAATTCATATACATTTCATCTATTCCTTTCAATAAATACAAATCATTTCATTTATATATATGGAAAGTTGTATCTAAATTCTGAAGAGCCCCAATATGATCGTAATGCCTCAAGCTCAGTAGGATTGAGAATATTGATTCAGCACATGGAGCAATCTTACGTAGGGTGACATTCAATTTTTTTAAGAAGCAAGTTAGTGAGGACAGAACATATTACAAGAACTCTGTTAACTTATGGAGATAGGATTTCACTTTTACAAACAGTTCAAGAATGTACGGATGGTGTTGCTAAGGTTTGCAGGGGATGTAAGAGACTGTCAGGGGATATTAGGTATCGAATTTGAATTTCGACTCTTAGTTGGAATTCTTAGACTTGGGGCGGTTACCATGATATAGTCATAACATAAAAAGAAAAGGGTGATAAAAAGAGCATACAATTTCTCCTCTAATCTTGCATTTTGATAGATATATATATTTAAGGTTTTCACTTTGTGCTTAAAAAATATTAACTCGTTAGCTTCAAATTATGTAGTGTGTGAGGATCGTAGTGCTCTTGCACATAACATTTATGGTCAACTCAGTATGTCATATATGGGGAAAACAACAATGGAATACTGGAGATTTGTCAAGAAACAATTGGTAAGTGGTTCTATCATCCTTTATTTTCATTATCAAATGTAAGATATGATTTAAATATATAGTTAATTTTCATCCTTAATCCCTGCTTCAATATAGTTAACACTTAAAAATATTGTTTTAAGCATTTAATTTTTTTTTTTTAATTAGCCTTAAATTGAACAATCATAAGATAGAAATAGTAAACTTTACAAAAGCTTTTATATGCAACAGTATTATGGGTGGTTTTCAAATATGGCAAAATGAGTTAACTTATTTATAAATATATCTATTTGTGTCTATCACTGCCTATTACTAATAGATGGTGACATTTTGCTATATTTGTAAATATTTTTTTGCAGTTTCGTCATTTAAAACAATTACCCTATTCTTTTTTAAACAAACTAAAACAATTTTTACAAAATTTATTTTCCGTCAAACATAACATCTCAGAGTGATCATTGGCTAGTTGACGTCGATTTTAGGCTCAACTAGCAAGTCAATTTTGAAGAGTTTTGTGTTTGCCTACTGACTGACCACACTAGCAATCAATGGTTTTGTTGGTTTTTTGAAAATTTGGAAACTAAATAAAATAAAAGATTCTAAGGGGAGAAGAAAAAGAAAAAAAAAGAAAAAAAAAAAGAAAAGAAAGAAGGGTGTGTTTGGTTTAACTTTTAAAGTGTTTAATTTTGAAAATAAGTTATTTTAGAAAAAAATTTAAGTGTTTGACAACCATTCAAAATAACTTTTAGAACATTTTCAAAGATTATTTTAAATGGTTTTTTTTTTTATAAAAAAATTTAGAATAAAAATGACTTTTTTAAAAAAATATTTTTTTATGTAATCAATTCAAACATGTTAGAAGAAAGGGAGACCAAAAGAAAATAAGGACAAAAGAGAAGAAGGGAAGAAAAACAAAAAAGAAAAAGAACCATGAGAAGACATGGGGAAGAGAAATGGAGATGGAAAATTAAGAGGAAAAAAGATACAAATAGCTGTTCATAAAAAAAATAATTATAACTTGGGGGAAAATGGTTTAATATTATGTCTATTTTGGGCAAATAAACTCTCAAGGTCTCACATAGAGATATTATCCCTCATAGAAATAGCTATGATTTTTTTATTATCTAGCAAGCCAATGTGAAATTTTACTCGCATTTTCAATCCTAATTACAAATCAAATCTTGTTGAATGAATTTCACCACCCATTTTCCAACAATTTGACAAGTACAAATATCAAACATAATCTTATATAATGAGATTTCTTTTTGTCGAAGATAATTAATATGTCTATCATTTATTTATTTATTTTTGATACTATGTGGATAGAGGAATCAAATCTTTAACTTCGATGTTGATAGTACAAATATTATGTCATTTAGGCTATGTTCATTTTGGCATATGTTTGTTATTTATTGTTTAGCTAACCTAACTACTGTAATTATGATTTACTATTTATCATATTTCCTTTCTTCTCTTAAAGGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAATAACCATCATGCTTTTGAATACTCAGCAAGGTTTGGACTTGCATGGTGGCAAATTGACTTTGGTTGGTATGCTATTAGGTTTCTTCAAGCTATTGGAGTCGCCACAAATGTAAAATTACCATCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA ATGGTACCTAGCTTAAGCATCAGTATTTCATATCATAGAAATCTCGCACATAAGAGTTTCAAGCTCCCTAAACGACTTGAATACTTTTTGGCTTATTGTGCAGCTCATGCACTCCAGGGTGATCCAATTGATTGGATTGAAAGAAGCATATTTATATGGTTCTCGAAGCATGGGAGACCCGACAACGTTCGTGATTTGGAGAAGCAAAGCTTCTATAGGTTTATCCATAAAACATATTTTCTTCATCACATTGCTCTTGCGGTCCTACTCTATCAACTTGGAGGACTTCCATTCTTTATATGGGGCACGTGTGTGAGGATCGTAGTGCTCTTGCACATAACATTTATGGTCAACTCAGTATGTCATATATGGGGAAAACAACAATGGAATACTGGAGATTTGTCAAGAAACAATTGGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAATAACCATCATGCTTTTGAATACTCAGCAAGGTTTGGACTTGCATGGTGGCAAATTGACTTTGGTTGGTATGCTATTAGGTTTCTTCAAGCTATTGGAGTCGCCACAAATGTAAAATTACCATCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA ATGGTACCTAGCTTAAGCATCAGTATTTCATATCATAGAAATCTCGCACATAAGAGTTTCAAGCTCCCTAAACGACTTGAATACTTTTTGGCTTATTGTGCAGCTCATGCACTCCAGGGTGATCCAATTGATTGGATTGAAAGAAGCATATTTATATGGTTCTCGAAGCATGGGAGACCCGACAACGTTCGTGATTTGGAGAAGCAAAGCTTCTATAGGTTTATCCATAAAACATATTTTCTTCATCACATTGCTCTTGCGGTCCTACTCTATCAACTTGGAGGACTTCCATTCTTTATATGGGGCACGTGTGTGAGGATCGTAGTGCTCTTGCACATAACATTTATGGTCAACTCAGTATGTCATATATGGGGAAAACAACAATGGAATACTGGAGATTTGTCAAGAAACAATTGGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAATAACCATCATGCTTTTGAATACTCAGCAAGGTTTGGACTTGCATGGTGGCAAATTGACTTTGGTTGGTATGCTATTAGGTTTCTTCAAGCTATTGGAGTCGCCACAAATGTAAAATTACCATCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA MVPSLSISISYHRNLAHKSFKLPKRLEYFLAYCAAHALQGDPIDWIERSIFIWFSKHGRPDNVRDLEKQSFYRFIHKTYFLHHIALAVLLYQLGGLPFFIWGTCVRIVVLLHITFMVNSVCHIWGKQQWNTGDLSRNNWLVSLLAFGEGWHNNHHAFEYSARFGLAWWQIDFGWYAIRFLQAIGVATNVKLPSPIHKQRLVIDY Homology
BLAST of Clc07G12190 vs. NCBI nr
Match: XP_008454221.1 (PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 372.1 bits (954), Expect = 3.1e-99 Identity = 180/256 (70.31%), Postives = 191/256 (74.61%), Query Frame = 0
BLAST of Clc07G12190 vs. NCBI nr
Match: XP_011652980.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus] >KGN52906.1 hypothetical protein Csa_014968 [Cucumis sativus]) HSP 1 Score: 371.3 bits (952), Expect = 5.3e-99 Identity = 177/255 (69.41%), Postives = 189/255 (74.12%), Query Frame = 0
BLAST of Clc07G12190 vs. NCBI nr
Match: XP_022980838.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 354.8 bits (909), Expect = 5.1e-94 Identity = 171/254 (67.32%), Postives = 185/254 (72.83%), Query Frame = 0
BLAST of Clc07G12190 vs. NCBI nr
Match: XP_023526679.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 354.4 bits (908), Expect = 6.7e-94 Identity = 170/253 (67.19%), Postives = 184/253 (72.73%), Query Frame = 0
BLAST of Clc07G12190 vs. NCBI nr
Match: XP_022955955.1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93 Identity = 170/253 (67.19%), Postives = 184/253 (72.73%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy Swiss-Prot
Match: Q949X0 (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3 PE=1 SV=2) HSP 1 Score: 280.0 bits (715), Expect = 2.1e-74 Identity = 130/226 (57.52%), Postives = 157/226 (69.47%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy Swiss-Prot
Match: Q9FV68 (Icosanoyl-CoA 5-desaturase (Fragment) OS=Limnanthes douglasii OX=28973 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.0e-65 Identity = 119/227 (52.42%), Postives = 146/227 (64.32%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy Swiss-Prot
Match: P0DOW2 (Acyl-CoA C20 Delta5-desaturase OS=Anemone leveillei OX=212809 GN=AL10 PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.7e-63 Identity = 109/223 (48.88%), Postives = 143/223 (64.13%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy Swiss-Prot
Match: P0DOW3 (Acyl-CoA 5-desaturase AL21 OS=Anemone leveillei OX=212809 GN=AL21 PE=1 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 5.4e-62 Identity = 110/223 (49.33%), Postives = 142/223 (63.68%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy Swiss-Prot
Match: Q9LVZ3 (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADS3.2 PE=2 SV=3) HSP 1 Score: 235.0 bits (598), Expect = 7.8e-61 Identity = 110/222 (49.55%), Postives = 139/222 (62.61%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy TrEMBL
Match: A0A1S3BYW2 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103494693 PE=3 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99 Identity = 180/256 (70.31%), Postives = 191/256 (74.61%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy TrEMBL
Match: A0A0A0KYH4 (FA_desaturase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006130 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99 Identity = 177/255 (69.41%), Postives = 189/255 (74.12%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy TrEMBL
Match: A0A6J1J0F3 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480111 PE=3 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.5e-94 Identity = 171/254 (67.32%), Postives = 185/254 (72.83%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy TrEMBL
Match: A0A6J1GWI3 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457789 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 9.4e-94 Identity = 170/253 (67.19%), Postives = 184/253 (72.73%), Query Frame = 0
BLAST of Clc07G12190 vs. ExPASy TrEMBL
Match: A0A1S4E0J1 (palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494694 PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 6.1e-85 Identity = 151/250 (60.40%), Postives = 170/250 (68.00%), Query Frame = 0
BLAST of Clc07G12190 vs. TAIR 10
Match: AT3G15850.1 (fatty acid desaturase 5 ) HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75 Identity = 130/226 (57.52%), Postives = 157/226 (69.47%), Query Frame = 0
BLAST of Clc07G12190 vs. TAIR 10
Match: AT3G15870.1 (Fatty acid desaturase family protein ) HSP 1 Score: 235.0 bits (598), Expect = 5.5e-62 Identity = 110/222 (49.55%), Postives = 139/222 (62.61%), Query Frame = 0
BLAST of Clc07G12190 vs. TAIR 10
Match: AT2G31360.1 (16:0delta9 desaturase 2 ) HSP 1 Score: 234.6 bits (597), Expect = 7.2e-62 Identity = 110/231 (47.62%), Postives = 143/231 (61.90%), Query Frame = 0
BLAST of Clc07G12190 vs. TAIR 10
Match: AT1G06080.1 (delta 9 desaturase 1 ) HSP 1 Score: 233.8 bits (595), Expect = 1.2e-61 Identity = 108/231 (46.75%), Postives = 142/231 (61.47%), Query Frame = 0
BLAST of Clc07G12190 vs. TAIR 10
Match: AT1G06360.1 (Fatty acid desaturase family protein ) HSP 1 Score: 221.1 bits (562), Expect = 8.2e-58 Identity = 114/229 (49.78%), Postives = 137/229 (59.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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