Clc07G11720 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G11720
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor LEP-like
Location	ClcChr07: 26551743 .. 26552252 (+)
RNA-Seq Expression	Clc07G11720
Synteny	Clc07G11720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTCAAGAACTCCAAAACCAACTCCCCTTCTTCATCCAAGCCAAGAAGAAAGCAACAAGACCAACAACCTCATCAACAAGAACCCACTAGATTTCTTGGTGTTAGAAGGCGCCCATGGGGCAGATATGCTGCTGAAATTAGAGACCCTTCTACTAAAGAAAGGCATTGGCTCGGCACCTTCGACACCGCCGAAGAGGCCGCCTTAGCCTACGACCGAGCAGCCCGGTCCATGCGTGGCTCCAAGGCTCGCACCAACTTCATCTACTCAGACATGCCTCATGGCTCCTCCGTCACCTCCATTATCTCTCCCGACGAATCCCAACTCTTCCCTCCAACTCCTACTCCAACCTCTCTACCTTCCCTAACTCAACCCAACCACCTCTGCTTCTCCCTCCACCACGACCCTTTCACCACCAGTTCATTCCCGGGCAACGACTGGTTACCCGAGTCCGACTCTTATCAACCCGTCACCCGCCTTCATGGACACCGGCATCTCGCACGATGA

mRNA sequence

ATGGACTTCAAGAACTCCAAAACCAACTCCCCTTCTTCATCCAAGCCAAGAAGAAAGCAACAAGACCAACAACCTCATCAACAAGAACCCACTAGATTTCTTGGTGTTAGAAGGCGCCCATGGGGCAGATATGCTGCTGAAATTAGAGACCCTTCTACTAAAGAAAGGCATTGGCTCGGCACCTTCGACACCGCCGAAGAGGCCGCCTTAGCCTACGACCGAGCAGCCCGGTCCATGCGTGGCTCCAAGGCTCGCACCAACTTCATCTACTCAGACATGCCTCATGGCTCCTCCGTCACCTCCATTATCTCTCCCGACGAATCCCAACTCTTCCCTCCAACTCCTACTCCAACCTCTCTACCTTCCCTAACTCAACCCAACCACCTCTGCTTCTCCCTCCACCACGACCCTTTCACCACCAGTTCATTCCCGGGCAACGACTGGTTACCCGAGTCCGACTCTTATCAACCCGTCACCCGCCTTCATGGACACCGGCATCTCGCACGATGA

Coding sequence (CDS)

ATGGACTTCAAGAACTCCAAAACCAACTCCCCTTCTTCATCCAAGCCAAGAAGAAAGCAACAAGACCAACAACCTCATCAACAAGAACCCACTAGATTTCTTGGTGTTAGAAGGCGCCCATGGGGCAGATATGCTGCTGAAATTAGAGACCCTTCTACTAAAGAAAGGCATTGGCTCGGCACCTTCGACACCGCCGAAGAGGCCGCCTTAGCCTACGACCGAGCAGCCCGGTCCATGCGTGGCTCCAAGGCTCGCACCAACTTCATCTACTCAGACATGCCTCATGGCTCCTCCGTCACCTCCATTATCTCTCCCGACGAATCCCAACTCTTCCCTCCAACTCCTACTCCAACCTCTCTACCTTCCCTAACTCAACCCAACCACCTCTGCTTCTCCCTCCACCACGACCCTTTCACCACCAGTTCATTCCCGGGCAACGACTGGTTACCCGAGTCCGACTCTTATCAACCCGTCACCCGCCTTCATGGACACCGGCATCTCGCACGATGA

Protein sequence

MDFKNSKTNSPSSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFPPTPTPTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVTRLHGHRHLAR

Homology

[Close]

BLAST of Clc07G11720 vs. NCBI nr
Match: XP_038877958.1 (ethylene-responsive transcription factor LEP-like [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 147/160 (91.88%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MDFKNSKTN-SPSSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWL 60
           MDFKNSKTN SPS SKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWL
Sbjct: 1   MDFKNSKTNHSPSPSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWL 60

Query: 61  GTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFPPTPTPTS 120
           GTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVTSIISPDESQL+PPTPTPTS
Sbjct: 61  GTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQLYPPTPTPTS 120

Query: 121 LPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           L  L+QPNHLCF+LH DPF+TSSFPGNDWLP+++SYQPVT
Sbjct: 121 LTPLSQPNHLCFTLHDDPFSTSSFPGNDWLPDTNSYQPVT 160

[Close]

BLAST of Clc07G11720 vs. NCBI nr
Match: KAG7018390.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.8 bits (730), Expect = 2.4e-73
Identity = 144/163 (88.34%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 1   MDFKNSKTNSPSSSKPRRKQQDQ--QPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60
           MDFKNS TNSPS SKPRRK QDQ  QPH QEPTRFLGVRRRPWGRYAAEIRDPSTKERHW
Sbjct: 1   MDFKNSNTNSPSPSKPRRKHQDQHPQPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60

Query: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFP--PTPT 120
           LGTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVT+IISPD+SQLFP  PTPT
Sbjct: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTPT 120

Query: 121 PTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           PTSLP  TQPNHLCF+LH DPFT +SFPGNDWLP++DSYQPVT
Sbjct: 121 PTSLPQ-TQPNHLCFTLHDDPFTATSFPGNDWLPDTDSYQPVT 162

[Close]

BLAST of Clc07G11720 vs. NCBI nr
Match: XP_022980062.1 (ethylene-responsive transcription factor LEP-like [Cucurbita maxima])

HSP 1 Score: 285.0 bits (728), Expect = 4.1e-73
Identity = 144/163 (88.34%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MDFKNSKTNSPSSSKPRRKQQDQ--QPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60
           MDFKNS TNSPS SKPRRK  DQ  QPH QEPTRFLGVRRRPWGRYAAEIRDPSTKERHW
Sbjct: 1   MDFKNSNTNSPSPSKPRRKHHDQHPQPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60

Query: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFP--PTPT 120
           LGTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVT+IISPD+SQLFP  PTPT
Sbjct: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTPT 120

Query: 121 PTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           PTSLP  TQPNHLCF+LH DPFT +SFPGNDWLP+SDSYQPVT
Sbjct: 121 PTSLPQ-TQPNHLCFTLHDDPFTATSFPGNDWLPDSDSYQPVT 162

[Close]

BLAST of Clc07G11720 vs. NCBI nr
Match: KAG6581971.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 9.2e-73
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MDFKNSKTNSPSSSKPRRKQQDQ--QPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60
           MDFKNS TNSPS SKPRRK QDQ   PH QEPTRFLGVRRRPWGRYAAEIRDPSTKERHW
Sbjct: 1   MDFKNSNTNSPSPSKPRRKHQDQHPHPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60

Query: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFP--PTPT 120
           LGTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVT+IISPD+SQLFP  PTPT
Sbjct: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTPT 120

Query: 121 PTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           PTSLP  TQPNHLCF+LH DPFT +SFPGNDWLP++DSYQPVT
Sbjct: 121 PTSLPQ-TQPNHLCFTLHDDPFTATSFPGNDWLPDTDSYQPVT 162

[Close]

BLAST of Clc07G11720 vs. NCBI nr
Match: XP_023528971.1 (ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.6 bits (719), Expect = 4.6e-72
Identity = 142/164 (86.59%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   MDFKNSKTNSPSSSKPRRKQQD---QQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERH 60
           MDFKNS TNSPS SKPRRK  D   Q PH QEPTRFLGVRRRPWGRYAAEIRDPSTKERH
Sbjct: 1   MDFKNSNTNSPSPSKPRRKHHDQHSQHPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERH 60

Query: 61  WLGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFP--PTP 120
           WLGTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVT+IISPD+SQLFP  PTP
Sbjct: 61  WLGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTP 120

Query: 121 TPTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           TPTSLP  TQPNHLCF+LH DPFT +SFPGNDWLP++DSYQPVT
Sbjct: 121 TPTSLPQ-TQPNHLCFTLHDDPFTATSFPGNDWLPDTDSYQPVT 163

[Close]

BLAST of Clc07G11720 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.9e-37
Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 12  SSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALA 71
           +SSK ++KQ D     Q  TRFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAALA
Sbjct: 4   TSSKSKKKQDD-----QVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALA 63

Query: 72  YDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFPPTPTPTS 120
           YDRAARSMRG++ARTNF+YSDMP  SSVTSI+SPD+    PP P P S
Sbjct: 64  YDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPS 106

[Close]

BLAST of Clc07G11720 vs. ExPASy Swiss-Prot
Match: Q9FZ90 (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 GN=ERF087 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.2e-36
Identity = 89/165 (53.94%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 5   NSKTNSPSSSKPRRKQQDQQPHQQ---EPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGT 64
           N+ + S S    R+KQQ  QP  Q   E  +++GVRRRPWGRYAAEIR+P+TKER+WLGT
Sbjct: 8   NAGSCSRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGT 67

Query: 65  FDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLF------PPTP 124
           FDTAEEAALAYDRAARS+RG  ARTNF+YSDMP GSSVTS +SPDESQ F      PP+ 
Sbjct: 68  FDTAEEAALAYDRAARSIRGLTARTNFVYSDMPRGSSVTSFVSPDESQRFISELFNPPSQ 127

Query: 125 TPTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESD-SYQPVT 160
              +  +    N+L  S ++    +  F  N W  E++  YQ +T
Sbjct: 128 LEATNSNNNNNNNLYSSTNNQNQNSIEFSYNGWPQEAECGYQSIT 172

[Close]

BLAST of Clc07G11720 vs. ExPASy Swiss-Prot
Match: Q6J9Q2 (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 GN=ERF086 PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 5.1e-26
Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 5   NSKTNSPSSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 64
           ++ T + +++  RR ++ +   Q EP RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDT
Sbjct: 30  SANTTTTTTTGERRGRRSK---QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDT 89

Query: 65  AEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTS------IISP-DESQLFPPTPTP 124
           A EAALAYDRAA SMRG++ARTNF+Y+     + +T+      I+SP + +Q F     P
Sbjct: 90  AHEAALAYDRAALSMRGTQARTNFVYTPTDVHTILTNPNLHSLIVSPYNNNQSF----LP 149

Query: 125 TSLPSLTQPNHLCFSLHHDP 138
            S P     +H  +  +H P
Sbjct: 150 NSSPQFVIDHHPHYQNYHQP 162

[Close]

BLAST of Clc07G11720 vs. ExPASy Swiss-Prot
Match: Q8H3Q1 (Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=39947 GN=FZP PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 6   SKTNSPSSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTA 65
           S  +SP S +P   +  ++   QEP RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA
Sbjct: 33  SPPSSPMSERPPSGRSRRR--AQEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTA 92

Query: 66  EEAALAYDRAARSMRGSKARTNFIYS 92
           +EAALAYDRAA SM+G++ARTNF+Y+
Sbjct: 93  QEAALAYDRAALSMKGAQARTNFVYT 116

[Close]

BLAST of Clc07G11720 vs. ExPASy Swiss-Prot
Match: Q9FYK5 (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana OX=3702 GN=ESR2 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-22
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 32  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFIY 91
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYD AAR+MRG KARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of Clc07G11720 vs. ExPASy TrEMBL
Match: A0A6J1IQE0 (ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN=LOC111479578 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-73
Identity = 144/163 (88.34%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 1   MDFKNSKTNSPSSSKPRRKQQDQ--QPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60
           MDFKNS TNSPS SKPRRK  DQ  QPH QEPTRFLGVRRRPWGRYAAEIRDPSTKERHW
Sbjct: 1   MDFKNSNTNSPSPSKPRRKHHDQHPQPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60

Query: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFP--PTPT 120
           LGTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVT+IISPD+SQLFP  PTPT
Sbjct: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTPT 120

Query: 121 PTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           PTSLP  TQPNHLCF+LH DPFT +SFPGNDWLP+SDSYQPVT
Sbjct: 121 PTSLPQ-TQPNHLCFTLHDDPFTATSFPGNDWLPDSDSYQPVT 162

[Close]

BLAST of Clc07G11720 vs. ExPASy TrEMBL
Match: A0A6J1GVK2 (ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 GN=LOC111457873 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 141/163 (86.50%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 1   MDFKNSKTNSPSSSKPRRKQQDQ--QPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60
           MDFKNS TNSPS SKPRRK  DQ   PH QEPTRFLGVRRRPWGRYAAEIRDPSTKERHW
Sbjct: 1   MDFKNSNTNSPSPSKPRRKHHDQHPHPHPQEPTRFLGVRRRPWGRYAAEIRDPSTKERHW 60

Query: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFP--PTPT 120
           LGTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSSVT+IISPD+SQLFP  PTPT
Sbjct: 61  LGTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTTIISPDDSQLFPPTPTPT 120

Query: 121 PTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
           PTS P  TQPNHLCF+LH DPFT +SFPGNDWLP++DSYQPVT
Sbjct: 121 PTSHPQ-TQPNHLCFTLHDDPFTATSFPGNDWLPDTDSYQPVT 162

[Close]

BLAST of Clc07G11720 vs. ExPASy TrEMBL
Match: A0A0A0KYM7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G007070 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66
Identity = 140/163 (85.89%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MDFKNSKTNSP--SSSKPRR-KQQD-QQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKER 60
           MDFK SKTNSP  SSSKPR+ KQQD QQP QQEPTRFLGVRRRPWGRYAAEIRDPSTKER
Sbjct: 1   MDFKTSKTNSPSSSSSKPRKSKQQDGQQPLQQEPTRFLGVRRRPWGRYAAEIRDPSTKER 60

Query: 61  HWLGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFPPTPT 120
           HWLGTFDTAE+AALAYDRAARSMRGSKARTNF+YSDMPHGSSVTSIISPDESQL+PPTP 
Sbjct: 61  HWLGTFDTAEDAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQLYPPTP- 120

Query: 121 PTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
                  TQPNHLCF    DPFTTSSFPGNDWLP+SDSYQPVT
Sbjct: 121 -------TQPNHLCF----DPFTTSSFPGNDWLPDSDSYQPVT 151

[Close]

BLAST of Clc07G11720 vs. ExPASy TrEMBL
Match: A0A1S3BXG1 (ethylene-responsive transcription factor LEP-like OS=Cucumis melo OX=3656 GN=LOC103494646 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.1e-66
Identity = 139/162 (85.80%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MDFKNSKTNSP-SSSKPRR-KQQD-QQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERH 60
           MDFK+SKTNSP SSSKPR+ KQQD QQP  QEPTRFLGVRRRPWGRYAAEIRDPSTKERH
Sbjct: 1   MDFKSSKTNSPSSSSKPRKSKQQDHQQPLPQEPTRFLGVRRRPWGRYAAEIRDPSTKERH 60

Query: 61  WLGTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFPPTPTP 120
           WLGTFDTAE+AALAYDRAARSMRGSKARTNF+YSDMPHGSSVTSIISPDESQL+PPTPT 
Sbjct: 61  WLGTFDTAEDAALAYDRAARSMRGSKARTNFVYSDMPHGSSVTSIISPDESQLYPPTPT- 120

Query: 121 TSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESDSYQPVT 160
                 +QPNHLCF    DPFTTSSFPGNDWLP+SDSYQPVT
Sbjct: 121 ------SQPNHLCF----DPFTTSSFPGNDWLPDSDSYQPVT 151

[Close]

BLAST of Clc07G11720 vs. ExPASy TrEMBL
Match: A0A6J1DVR8 (ethylene-responsive transcription factor LEP-like OS=Momordica charantia OX=3673 GN=LOC111024899 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.5e-55
Identity = 127/170 (74.71%), Postives = 137/170 (80.59%), Query Frame = 0


Query: 1   MDFKNSKTNSPS-SSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWL 60
           MDF +SKTNS S SSKPRRKQQ+QQ  QQE TRFLGVRRRPWGRYAAEIRDPSTKERHWL
Sbjct: 1   MDFTDSKTNSTSTSSKPRRKQQEQQ-QQQETTRFLGVRRRPWGRYAAEIRDPSTKERHWL 60

Query: 61  GTFDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDES-QLFPPTPTPT 120
           GTFDTAEEAALAYDRAARSMRGSKARTNF+YSDMPHGSS+TSIISPDES   FPP     
Sbjct: 61  GTFDTAEEAALAYDRAARSMRGSKARTNFVYSDMPHGSSITSIISPDESADAFPP----- 120

Query: 121 SLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESD---------SYQPVT 160
            +P+ TQ + L F+L HDPF TS FPGN+WL  SD         +YQPVT
Sbjct: 121 PIPTPTQNDQLSFAL-HDPFATSPFPGNNWLSNSDFDHDVDLPSNYQPVT 163

[Close]

BLAST of Clc07G11720 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-38
Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 12  SSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALA 71
           +SSK ++KQ D     Q  TRFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEAALA
Sbjct: 4   TSSKSKKKQDD-----QVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALA 63

Query: 72  YDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLFPPTPTPTS 120
           YDRAARSMRG++ARTNF+YSDMP  SSVTSI+SPD+    PP P P S
Sbjct: 64  YDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPS 106

[Close]

BLAST of Clc07G11720 vs. TAIR 10
Match: AT1G28160.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 3.0e-37
Identity = 89/165 (53.94%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 5   NSKTNSPSSSKPRRKQQDQQPHQQ---EPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGT 64
           N+ + S S    R+KQQ  QP  Q   E  +++GVRRRPWGRYAAEIR+P+TKER+WLGT
Sbjct: 8   NAGSCSRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGT 67

Query: 65  FDTAEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTSIISPDESQLF------PPTP 124
           FDTAEEAALAYDRAARS+RG  ARTNF+YSDMP GSSVTS +SPDESQ F      PP+ 
Sbjct: 68  FDTAEEAALAYDRAARSIRGLTARTNFVYSDMPRGSSVTSFVSPDESQRFISELFNPPSQ 127

Query: 125 TPTSLPSLTQPNHLCFSLHHDPFTTSSFPGNDWLPESD-SYQPVT 160
              +  +    N+L  S ++    +  F  N W  E++  YQ +T
Sbjct: 128 LEATNSNNNNNNNLYSSTNNQNQNSIEFSYNGWPQEAECGYQSIT 172

[Close]

BLAST of Clc07G11720 vs. TAIR 10
Match: AT5G18560.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-27
Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 5   NSKTNSPSSSKPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDT 64
           ++ T + +++  RR ++ +   Q EP RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDT
Sbjct: 30  SANTTTTTTTGERRGRRSK---QAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDT 89

Query: 65  AEEAALAYDRAARSMRGSKARTNFIYSDMPHGSSVTS------IISP-DESQLFPPTPTP 124
           A EAALAYDRAA SMRG++ARTNF+Y+     + +T+      I+SP + +Q F     P
Sbjct: 90  AHEAALAYDRAALSMRGTQARTNFVYTPTDVHTILTNPNLHSLIVSPYNNNQSF----LP 149

Query: 125 TSLPSLTQPNHLCFSLHHDP 138
            S P     +H  +  +H P
Sbjct: 150 NSSPQFVIDHHPHYQNYHQP 162

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BLAST of Clc07G11720 vs. TAIR 10
Match: AT1G24590.1 (DORNROSCHEN-like )

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-23
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 32  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSKARTNFIY 91
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYD AAR+MRG KARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

[Close]

BLAST of Clc07G11720 vs. TAIR 10
Match: AT1G12890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 0


Query: 15 KPRRKQQDQQPHQQEPTRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDR 74
          K   K++ ++  + +  ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA AYD 
Sbjct: 3  KSSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDV 62

Query: 75 AARSMRGSKARTNFIYSD 93
          AARS+ GS A TNF Y++
Sbjct: 63 AARSISGSLATTNFFYTE 80

The following BLAST results are available for this feature:

BLAST of Clc07G11720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877958.1	1.6e-77	91.88	ethylene-responsive transcription factor LEP-like [Benincasa hispida]	[more]
KAG7018390.1	2.4e-73	88.34	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022980062.1	4.1e-73	88.34	ethylene-responsive transcription factor LEP-like [Cucurbita maxima]	[more]
KAG6581971.1	9.2e-73	87.73	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023528971.1	4.6e-72	86.59	ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc07G11720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M644	2.9e-37	75.00	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FZ90	4.2e-36	53.94	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6J9Q2	5.1e-26	50.71	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H3Q1	1.5e-25	69.77	Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=...	[more]
Q9FYK5	7.7e-22	83.05	Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Clc07G11720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQE0	2.0e-73	88.34	ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1GVK2	1.1e-71	86.50	ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A0A0KYM7	1.8e-66	85.89	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G007070 PE=...	[more]
A0A1S3BXG1	3.1e-66	85.80	ethylene-responsive transcription factor LEP-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1DVR8	2.5e-55	74.71	ethylene-responsive transcription factor LEP-like OS=Momordica charantia OX=3673...	[more]

BLAST of Clc07G11720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13910.1	2.1e-38	75.00	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	3.0e-37	53.94	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	3.7e-27	50.71	Integrase-type DNA-binding superfamily protein	[more]
AT1G24590.1	5.5e-23	83.05	DORNROSCHEN-like	[more]
AT1G12890.1	3.5e-22	64.10	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 33..44 score: 53.33 coord: 55..71 score: 69.2
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 32..95 e-value: 7.9E-35 score: 131.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 33..81 e-value: 7.9E-14 score: 51.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 32..89 score: 20.73171
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 31..88 e-value: 1.20857E-30 score: 103.891
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 31..90 e-value: 5.8E-26 score: 92.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 2..160
None	No IPR available	PANTHER	PTHR31677:SF63	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP-LIKE	coord: 2..160
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 33..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G11720.1	Clc07G11720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity