Clc07G11290 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAATTGCGTGGAAGTATTGTCGAGGCAGCGGGAAGAAGAAGAAGAAGAAGAAGGAAGGACGGCGACGGAGATGGAGATGGAAGAGAAAGAAAAGAAAGGAAAAATGAGAATAAAAGTAGTGTTGACTAAAGAGGAATTGCAGTGGCTAATGGAGCAAATAAAGGAAAGAGGAGGGAAAGGATTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAAAAGTATTGAATTGTAGTATTGATGTTAATAATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAATTCCTGATCACATGCAGAGATAG ATGGGCAATTGCGTGGAAGTATTGTCGAGGCAGCGGGAAGAAGAAGAAGAAGAAGAAGGAAGGACGGCGACGGAGATGGAGATGGAAGAGAAAGAAAAGAAAGGAAAAATGAGAATAAAAGTAGTGTTGACTAAAGAGGAATTGCAGTGGCTAATGGAGCAAATAAAGGAAAGAGGAGGGAAAGGATTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAAAAGTATTGAATTGTAGTATTGATGTTAATAATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAATTCCTGATCACATGCAGAGATAG ATGGGCAATTGCGTGGAAGTATTGTCGAGGCAGCGGGAAGAAGAAGAAGAAGAAGAAGGAAGGACGGCGACGGAGATGGAGATGGAAGAGAAAGAAAAGAAAGGAAAAATGAGAATAAAAGTAGTGTTGACTAAAGAGGAATTGCAGTGGCTAATGGAGCAAATAAAGGAAAGAGGAGGGAAAGGATTAGAAGAATTGTTGGAAGAAATAGAAAGAGGAAGAAGAAAAGTATTGAATTGTAGTATTGATGTTAATAATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCTGAAATTCCTGATCACATGCAGAGATAG MGNCVEVLSRQREEEEEEEGRTATEMEMEEKEKKGKMRIKVVLTKEELQWLMEQIKERGGKGLEELLEEIERGRRKVLNCSIDVNNASWRPSLESIMECPEIPDHMQR Homology
BLAST of Clc07G11290 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 4.7e-30 Identity = 82/110 (74.55%), Postives = 90/110 (81.82%), Query Frame = 0
BLAST of Clc07G11290 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata]) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25 Identity = 75/106 (70.75%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of Clc07G11290 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.8 bits (312), Expect = 4.6e-25 Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Clc07G11290 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24 Identity = 74/107 (69.16%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Clc07G11290 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118.6 bits (296), Expect = 3.3e-23 Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Clc07G11290 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30 Identity = 82/110 (74.55%), Postives = 90/110 (81.82%), Query Frame = 0
BLAST of Clc07G11290 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.8e-26 Identity = 75/106 (70.75%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of Clc07G11290 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21 Identity = 70/114 (61.40%), Postives = 84/114 (73.68%), Query Frame = 0
BLAST of Clc07G11290 vs. ExPASy TrEMBL
Match: A0A6P4AMG6 (uncharacterized protein LOC107430133 OS=Ziziphus jujuba OX=326968 GN=LOC107430133 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.6e-15 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 0
BLAST of Clc07G11290 vs. ExPASy TrEMBL
Match: A0A6P5TQH7 (uncharacterized protein LOC110769682 OS=Prunus avium OX=42229 GN=LOC110769682 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14 Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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