Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGATGAAAACTTATGGCATAGTTCTGATAGTTTGTGGGTCTGTGATAGCGGCGATAGTGATTTTATGTTGTGTTTGTAAGTTTGGAAGCCGTAAGAAGAAGAAAACAATTACGAAGTCCACATATTTACCCAATGCTGCTCCGCAGAGGAACCCTGATCTTGAACGTGGCCAACTTAATAAGAACAATGGAGGAATGACTATCCTTGCTGGAGCAGCTGCTGGTTTAGCTACTACTGCTGTCCTTACCAATTTAAGCAGTGGCGGTGGCGGTGGCGGTGGCGGCGGCAGTGGTGACAGTGGCGGTGGTGGTGACAGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGTGGTGGTTGTGGTGGTGGTTGTGGTGGCGGTTGTGGTGGTTGA
mRNA sequence
GAAAGATGAAAACTTATGGCATAGTTCTGATAGTTTGTGGGTCTGTGATAGCGGCGATAGTGATTTTATGTTGTGTTTGTAAGTTTGGAAGCCGTAAGAAGAAGAAAACAATTACGAAGTCCACATATTTACCCAATGCTGCTCCGCAGAGGAACCCTGATCTTGAACGTGGCCAACTTAATAAGAACAATGGAGGAATGACTATCCTTGCTGGAGCAGCTGCTGGTTTAGCTACTACTGCTGTCCTTACCAATTTAAGCAGTGGCGGTGGCGGTGGCGGTGGCGGCGGCAGTGGTGACAGTGGCGGTGGTGGTGACAGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGTGGTGGTTGTGGTGGTGGTTGTGGTGGCGGTTGTGGTGGTTGA
Coding sequence (CDS)
ATGAAAACTTATGGCATAGTTCTGATAGTTTGTGGGTCTGTGATAGCGGCGATAGTGATTTTATGTTGTGTTTGTAAGTTTGGAAGCCGTAAGAAGAAGAAAACAATTACGAAGTCCACATATTTACCCAATGCTGCTCCGCAGAGGAACCCTGATCTTGAACGTGGCCAACTTAATAAGAACAATGGAGGAATGACTATCCTTGCTGGAGCAGCTGCTGGTTTAGCTACTACTGCTGTCCTTACCAATTTAAGCAGTGGCGGTGGCGGTGGCGGTGGCGGCGGCAGTGGTGACAGTGGCGGTGGTGGTGACAGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGTGGTGGTTGTGGTGGTGGTTGTGGTGGCGGTTGTGGTGGTTGA
Protein sequence
MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKKTITKSTYLPNAAPQRNPDLERGQLNKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGGGCGGGCGGGCGG
Homology
BLAST of Clc07G09910 vs. NCBI nr
Match:
XP_038889436.1 (acanthoscurrin-1-like [Benincasa hispida])
HSP 1 Score: 121.7 bits (304), Expect = 4.6e-24
Identity = 96/128 (75.00%), Postives = 102/128 (79.69%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKKTITKSTYLPNAAPQRNPDLERGQLNK 60
MKTYGIVLI CGSVIA I+IL CVCKFG RK KT+ TY+PNAA QRNPDLERGQ NK
Sbjct: 1 MKTYGIVLITCGSVIAGIMILRCVCKFGGRKIMKTV---TYIPNAASQRNPDLERGQPNK 60
Query: 61 NNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGGGCGG 120
NNGG+TILAGAAAGLAT AV+TNL + GGGGG G G GGDSGGG GGGCG GG
Sbjct: 61 NNGGITILAGAAAGLATAAVVTNLGNDDTGGGGGCGG--GEGGDSGGGCGGGGCG---GG 120
Query: 121 GCGGGCGG 129
GCGGGCGG
Sbjct: 121 GCGGGCGG 120
BLAST of Clc07G09910 vs. NCBI nr
Match:
KGN53550.1 (hypothetical protein Csa_015259 [Cucumis sativus])
HSP 1 Score: 115.2 bits (287), Expect = 4.3e-22
Identity = 94/130 (72.31%), Postives = 101/130 (77.69%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKKTITKSTYLPNAAPQRNPDLERGQL-- 60
MKTY IVLI GSVI A++IL CVCKFG +KKKTIT + +P PQRN D+ERGQL
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYN--MPKRTPQRNLDIERGQLPK 60
Query: 61 NKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGG-GGSGDSGGGGDSGGGGCGGGCGGG 120
N NNGGMTIL GAAAGLAT AV+T LSS GGGGGG GSG G GG GGGGCGGGC GG
Sbjct: 61 NNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGDGDGG--GGGGCGGGC-GG 120
Query: 121 CGGGCGGGCG 128
CGGGCGGGCG
Sbjct: 121 CGGGCGGGCG 125
BLAST of Clc07G09910 vs. NCBI nr
Match:
KAG6577050.1 (hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 112.8 bits (281), Expect = 2.1e-21
Identity = 90/132 (68.18%), Postives = 99/132 (75.00%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKK----TITKSTYLPNAAPQRNPDLERG 60
M+TY IVLI CG VIA+ VIL CVC +G RKKKK T T S P P R DLE G
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR--DLELG 60
Query: 61 QLNKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGG 120
+ NGGMTILAGAAAGLAT AV+T+L++ GGGGGGGG G+ GGGD GGGGCGGGCGG
Sbjct: 61 E--AKNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGGGEE-GGGDGGGGGCGGGCGG 120
Query: 121 GCGGGCGGGCGG 129
GCGGGCGGGCGG
Sbjct: 121 GCGGGCGGGCGG 127
BLAST of Clc07G09910 vs. NCBI nr
Match:
XP_023552868.1 (glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 109.4 bits (272), Expect = 2.4e-20
Identity = 89/132 (67.42%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKK----TITKSTYLPNAAPQRNPDLERG 60
M+TY IVLI CG VIA+ VIL CVC +G RKKKK T T S P P R DLE G
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR--DLELG 60
Query: 61 QLNKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGG 120
+ NGGMTILAGAAAGLAT AV+T+LS+ GGGGGGG G GGG GGGGCGGGCGG
Sbjct: 61 E--AKNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGEEGGGDGGGGDGGGGCGGGCGG 120
Query: 121 GCGGGCGGGCGG 129
GCGGGCGGGCGG
Sbjct: 121 GCGGGCGGGCGG 128
BLAST of Clc07G09910 vs. NCBI nr
Match:
XP_022985127.1 (glycine-rich protein 5-like [Cucurbita maxima])
HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20
Identity = 89/132 (67.42%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKK----TITKSTYLPNAAPQRNPDLERG 60
M+TY IVLI G VIA+ VIL CVC +G RKKKK T T S P P R DLE G
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALRPTPRPSR--DLELG 60
Query: 61 QLNKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGG 120
+ NGGMTILAGAAAGLAT AV+T+LS+ GGGGGGGG G GGG GGGGCGGGCGG
Sbjct: 61 E--AKNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGGEGGDDGGGGDGGGGCGGGCGG 120
Query: 121 GCGGGCGGGCGG 129
GCGGGCGGGCGG
Sbjct: 121 GCGGGCGGGCGG 128
BLAST of Clc07G09910 vs. ExPASy TrEMBL
Match:
A0A0A0KVE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 2.1e-22
Identity = 94/130 (72.31%), Postives = 101/130 (77.69%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKKTITKSTYLPNAAPQRNPDLERGQL-- 60
MKTY IVLI GSVI A++IL CVCKFG +KKKTIT + +P PQRN D+ERGQL
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYN--MPKRTPQRNLDIERGQLPK 60
Query: 61 NKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGG-GGSGDSGGGGDSGGGGCGGGCGGG 120
N NNGGMTIL GAAAGLAT AV+T LSS GGGGGG GSG G GG GGGGCGGGC GG
Sbjct: 61 NNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGDGDGG--GGGGCGGGC-GG 120
Query: 121 CGGGCGGGCG 128
CGGGCGGGCG
Sbjct: 121 CGGGCGGGCG 125
BLAST of Clc07G09910 vs. ExPASy TrEMBL
Match:
A0A6J1J409 (glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 89/132 (67.42%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKK----TITKSTYLPNAAPQRNPDLERG 60
M+TY IVLI G VIA+ VIL CVC +G RKKKK T T S P P R DLE G
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALRPTPRPSR--DLELG 60
Query: 61 QLNKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGG 120
+ NGGMTILAGAAAGLAT AV+T+LS+ GGGGGGGG G GGG GGGGCGGGCGG
Sbjct: 61 E--AKNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGGEGGDDGGGGDGGGGCGGGCGG 120
Query: 121 GCGGGCGGGCGG 129
GCGGGCGGGCGG
Sbjct: 121 GCGGGCGGGCGG 128
BLAST of Clc07G09910 vs. ExPASy TrEMBL
Match:
A0A6J1EY84 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19
Identity = 90/134 (67.16%), Postives = 98/134 (73.13%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKK----TITKSTYLPNAAPQRNPDLERG 60
M+TY IVLI CG VIA+ VIL CVC +G RKKKK T T S P P R DLE G
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR--DLELG 60
Query: 61 QLNKNNGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGG--SGDSGGGGDSGGGGCGGGC 120
+ NGGMTILAGAAAGLAT AV+T+L++ GGGGGGGG G G GGD GGGGCGGGC
Sbjct: 61 E--AKNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGD-GGGGCGGGC 120
Query: 121 GGGCGGGCGGGCGG 129
GGGCGGGCGGGCGG
Sbjct: 121 GGGCGGGCGGGCGG 129
BLAST of Clc07G09910 vs. ExPASy TrEMBL
Match:
A0A438I7N4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_041641 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 6.7e-13
Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKKTITKSTYLPNAAPQRNPDLERGQLNK 60
MK Y +VLI CGSV AIV+LCC+CK ++K+ + +ST P +A + D+E+GQ +K
Sbjct: 1 MKAYAVVLIACGSVAVAIVVLCCLCKGDGKRKRPDVQRSTAAPRSAQKTYSDMEKGQTSK 60
Query: 61 N----NGGMTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGG 113
+ +G M ILAGA A +A TAV+T SSGGGGG GGG G GGGG GGGGCGG
Sbjct: 61 SSDSKDGKMVILAGAGAVIAATAVVT-ASSGGGGGCGGGGGGCGGGGGCGGGGCGG 115
BLAST of Clc07G09910 vs. ExPASy TrEMBL
Match:
A0A438G759 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_065040 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12
Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 0
Query: 1 MKTYGIVLIVCGSVIAAIVILCCVCKFGSRKKKKTITKSTYLPNAAPQRNPDLERGQLNK 60
MK Y +VLI CGSV AIV+LCC+CK ++K+ + +ST P +A + D+E+GQ +K
Sbjct: 1 MKAYAVVLIACGSVAVAIVVLCCLCKGDGKRKRPDVQRSTAAPRSAQKTYSDMEKGQTSK 60
Query: 61 NNGG----MTILAGAAAGLATTAVLTNLSSGGGGGGGGGSGDSGGGGDSGGGGCGGGCGG 120
++G M ILAGA A +A TAV+T S GG GGGGGG G GGGGCGGG GG
Sbjct: 61 SSGSKDGKMVILAGAGAVIAATAVVTASSGGGCGGGGGGCG-------GGGGGCGGGGGG 120
Query: 121 GCGGGCGGGCG 128
GCG GGGCG
Sbjct: 121 GCG---GGGCG 121
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038889436.1 | 4.6e-24 | 75.00 | acanthoscurrin-1-like [Benincasa hispida] | [more] |
| KGN53550.1 | 4.3e-22 | 72.31 | hypothetical protein Csa_015259 [Cucumis sativus] | [more] |
| KAG6577050.1 | 2.1e-21 | 68.18 | hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023552868.1 | 2.4e-20 | 67.42 | glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_022985127.1 | 4.0e-20 | 67.42 | glycine-rich protein 5-like [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KVE1 | 2.1e-22 | 72.31 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1 | [more] |
| A0A6J1J409 | 1.9e-20 | 67.42 | glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=... | [more] |
| A0A6J1EY84 | 2.1e-19 | 67.16 | glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 S... | [more] |
| A0A438I7N4 | 6.7e-13 | 54.31 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_041641 PE=4 SV=1 | [more] |
| A0A438G759 | 3.3e-12 | 52.67 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_065040 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
