Clc07G09730 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G09730
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ras-related protein RABA1b-like
Location	ClcChr07: 24193464 .. 24195996 (+)
RNA-Seq Expression	Clc07G09730
Synteny	Clc07G09730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGAGGGTTAGAAAAGTTTGTTTTGAAAAATCAGGTTAAATTTCATATTTTCAAAAAAATAGAAGGCCAAATGTAAAAAGTTTCTATAGTTTTAAGGCTATTTTCCCGAAACATCATTTCCTTTATTGATTTCACACTCTTCCCCCCACTTGATTTTGCATTTCATCGTTTTTCTTTTTCTCACATTCCTCGCAGTAACTCTCTCTCTTCCCCTTCTCTGTTCTTCTTCTTCTTCTTCTTCATCTTCGTCCATAAAGTTTGAGTTAAATCGAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGCGTCGGTAAGTCCAATTTGCTCTCTAGATTTACTAAGAACGAGTTCAACCTTGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTTTTCTTTCTTCTCTTTCCATTATATATCTATTCTTTTCTTGCCTTCTCTTTCGTTTTCCCTTCCCTTGATTTCCCTCTCACTTTTTGCTTCCCTTTTTCGATTCTGCTTTCTGCTTACCGTTTGCTCTGTTGGCTTTGAGTGTTCTGATTTATGGGTTTTGGTTAATTAGCATGTTCTGGTTTGCCGTGAGGGTTGTAATAACCTAGATCTGTTTGATGGAAACTGTGTTCTCTTCTCAATCTTGTGTTATTATGCTTCAATTGAGTATTTTAATGCTCATCAAGTTAGTTTTGATATCTTCTTATTGTGTTGTGTTGCGGCTTTGTTCTTCAACTTTCATGGCTGCAAGGGTAATTTCGCTGCAAGCTTAGATTCAGAAGGCATTGAAGAATTCATTTAATAGATGTTAATGAAGTAGTTGGGACTTGCGGACCCTTGTTGAGGAAGACTTTGGATTCTTCTGTTTCGTAGATCGTGTGCTCTCAGCCATTTCTTTTCTTTTTTTTCCTTTAAAAAAAAAAAAAAAAAAAACTCTTATAATTAATATTAGCAACAGAGATTGTTTTGATTCTTCCAATTATTCTTTCCCCTGTCTCCCGAGAAAGTATAAAGGTATTTGGCTTCCTTCTACAGGAATTCGTTTCCTGTTTTCCAAGGAGTTATATATTAGAATTTTCTTTCTTGCATTGTAGCTCCTCAACCCTTCTTTTCCAAAAAAAAAAAAAGTTCTGTTCCTTCAAATGTCTGCTGGAGGAAAAAATAAAACCAAGATTTCATAACATTTCAATGAAATTTCTATTTTTCTGGGTTAGCACTTAGCAGGGTTCTTGATCTCAATTAGTGCCATTGATTCCCTTTAAGAGAAGCTCAAAGTGGTGTTATAATTACTTAGAAGTAGTTTAGAGTATCCTACTAACAAGTGAAACTATGTCATCTGCTGGAATATTGTTGATGTGTGTGGAACTTTTGTCATAAGTTCTTGGTATCTATTGTTTTTGTCAAATTAGCCCAAGCTCTCATAAAAGCTGAAGCTTCTATATGTGGATTTCCTAGAAGAAATGATGATGTCACTCCTTAACAATTATGAATCTTCACTATCATTCCTCAGCACTCCCCTTCCACAAAATAAGCATCTGACAAAGGAAATAGAATGATCTTGATGTGTTTTCCAACTCTCTATTGACTATGGTTTTACTTTTTATTTTTGCAATACATGTTGACTAGTAAATTGCAATTTCTGTGGTGAGTTACAATTCTTTTTCTAAATCAGTTGAAAAGATCGCTTCATTATTCACCGATACAATTCTGCTAGACTGATTGTACGATCTAGTTTACAATCTCTCAGGTTTTCTTTAAATTGAATGAGCTGTTCAGATCTGCGTGGATTTTGTGTCTATAGGTACCGTGCCATCACTAGTGCCTACTATCGTGGAGCAGTCGGTGCGCTCCTTGTATATGATGTCACCCGTCATGCGACATTCGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTATGCCGAGAGGGAATCACTGTACTTCATTGAGACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCCGAGGTTCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGGTAATAATCTGTCTAGGTGATTTTGGATTTCATGTACTGTAATATTTTTTTCCCCCTTGAAGATGGTTAAGAAAGAGGAAGATATATCCCCCAAGACGCTGAATCTTGCTGTATTACAGAAAAAGAAGAGTACCTGAGCCACATGATTTGTTTGTGGTTGCTGTTGTGTCCATCATTATTAGCTTCTACC

mRNA sequence

CAAAAGAGGGTTAGAAAAGTTTGTTTTGAAAAATCAGGTTAAATTTCATATTTTCAAAAAAATAGAAGGCCAAATGTAAAAAGTTTCTATAGTTTTAAGGCTATTTTCCCGAAACATCATTTCCTTTATTGATTTCACACTCTTCCCCCCACTTGATTTTGCATTTCATCGTTTTTCTTTTTCTCACATTCCTCGCAGTAACTCTCTCTCTTCCCCTTCTCTGTTCTTCTTCTTCTTCTTCTTCATCTTCGTCCATAAAGTTTGAGTTAAATCGAAGCAACAATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGCGTCGGTAAGTCCAATTTGCTCTCTAGATTTACTAAGAACGAGTTCAACCTTGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACTAGTGCCTACTATCGTGGAGCAGTCGGTGCGCTCCTTGTATATGATGTCACCCGTCATGCGACATTCGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTATGCCGAGAGGGAATCACTGTACTTCATTGAGACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCCGAGGTTCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAACTTCGGTAATAATCTGTCTAGGTGATTTTGGATTTCATGTACTGTAATATTTTTTTCCCCCTTGAAGATGGTTAAGAAAGAGGAAGATATATCCCCCAAGACGCTGAATCTTGCTGTATTACAGAAAAAGAAGAGTACCTGAGCCACATGATTTGTTTGTGGTTGCTGTTGTGTCCATCATTATTAGCTTCTACC

Coding sequence (CDS)

ATGGCTGGTTACAGAGCTGATGATGATTACGACTACCTATTCAAGGTGGTTCTGATTGGGGACTCCGGCGTCGGTAAGTCCAATTTGCTCTCTAGATTTACTAAGAACGAGTTCAACCTTGAGTCCAAATCCACCATTGGTGTCGAGTTCGCCACCAGGACCTTGAACGTCGATGGTAAAGTTATCAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACTAGTGCCTACTATCGTGGAGCAGTCGGTGCGCTCCTTGTATATGATGTCACCCGTCATGCGACATTCGAGAACGTGGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCTGATCTTCGCCACCTTGTTGCTGTTCCAACCGAAGATGGAAAGTCGTATGCCGAGAGGGAATCACTGTACTTCATTGAGACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCCGAGGTTCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCCGTTGAAGGAGGAGAAAATGGATCTGCTTCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAAACAGAATCAAATGTTGCTCGAGCTAA

Protein sequence

MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS

Homology

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BLAST of Clc07G09730 vs. NCBI nr
Match: XP_022982677.1 (ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related protein RABA1b-like [Cucurbita pepo subsp. pepo] >XP_038877813.1 ras-related protein RABA1b-like [Benincasa hispida] >KAG6600502.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031142.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427.6 bits (1098), Expect = 6.6e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

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BLAST of Clc07G09730 vs. NCBI nr
Match: XP_004137233.1 (ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Csa_015307 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

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BLAST of Clc07G09730 vs. NCBI nr
Match: XP_022942927.1 (ras-related protein RABA1b-like [Cucurbita moschata])

HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGEKINI+DESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS 217

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BLAST of Clc07G09730 vs. NCBI nr
Match: XP_022142868.1 (ras-related protein Rab11D-like [Momordica charantia])

HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Clc07G09730 vs. NCBI nr
Match: XP_008451755.1 (PREDICTED: ras-related protein RABA1b-like [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNR+KCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMKCCSS 217

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BLAST of Clc07G09730 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

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BLAST of Clc07G09730 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFEN  RWLKEL++HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAVPTEDGKS+AERESLYF+ETSALEA NVE AF EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESG-LNRIKCCSS 218
           +AVE G++GS+S +P++G+ IN+K++S  L R  CCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

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BLAST of Clc07G09730 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.0e-95
Identity = 176/218 (80.73%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENV RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLVAV T++ K  AERE LYF+ETSALEA NVE AF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDE-SGLNRIKCCSS 218
           KAVE G+ G+ SS P +GE INIKDE S   +  CCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Clc07G09730 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-95
Identity = 174/218 (79.82%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGY+ADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT++LN+DGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE   RWLKEL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNKSDLRHLV V TEDGK++AE+ESLYF+ETSALEA NVE AF+EVLTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINI-KDESGLNRIKCCSS 218
           +AVE G+  S S VP+QG+ IN+ +D S LNR +CCS+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218

[Close]

BLAST of Clc07G09730 vs. ExPASy Swiss-Prot
Match: Q9FK68 (Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.7e-95
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE+ESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINI-KDESGLNRIKCCSS 218
           KA+E      +++VP++G+KI+I KD S + +  CCS+
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Clc07G09730 vs. ExPASy TrEMBL
Match: A0A6J1IX83 (ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Clc07G09730 vs. ExPASy TrEMBL
Match: A0A0A0KXK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.1e-116
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Clc07G09730 vs. ExPASy TrEMBL
Match: A0A6J1FRL8 (ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.1e-116
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGEKINI+DESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIRDESGLNRIKCCSS 217

[Close]

BLAST of Clc07G09730 vs. ExPASy TrEMBL
Match: A0A6J1CPC3 (ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS
Sbjct: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 217

[Close]

BLAST of Clc07G09730 vs. ExPASy TrEMBL
Match: A0A1S3BSA1 (ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KAVEGGENGSAS+VPAQGEKINIKDESGLNR+KCCSS
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESGLNRMKCCSS 217

[Close]

BLAST of Clc07G09730 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-99
Identity = 187/218 (85.78%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATFENVDRWLKELKNHTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           K VE GE+G+A SVP +GEKI +K D S L ++ CCS+
Sbjct: 181 KQVEAGEDGNA-SVP-KGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Clc07G09730 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 348.2 bits (892), Expect = 4.8e-96
Identity = 175/217 (80.65%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+RWL+EL++HTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIKDESGLNRIKCCSS 218
           KA+E GE+  + +VP++GEKI++ D S + +  CCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV-DVSAVKKTGCCSN 214

[Close]

BLAST of Clc07G09730 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 348.2 bits (892), Expect = 4.8e-96
Identity = 178/218 (81.65%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TFENV+ WLKEL+NHTD NIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VMLVGNKSDLRHLVAV TED KS+AE+ESLYF+ETSALEA NVE AFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINI-KDESGLNRIKCCSS 218
           KA+E      +++VP++G+KI+I KD S + +  CCS+
Sbjct: 181 KAMEAA--SESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Clc07G09730 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 337.0 bits (863), Expect = 1.1e-92
Identity = 168/218 (77.06%), Postives = 194/218 (88.99%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATFEN  RWL+EL+ HTD NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           VML+GNK DLRHLVAV TE+ K++AERESLYF+ETSAL+A NVE AF EVLTQI+ IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 KAVEGGENGSASSVPAQGEKINIK-DESGLNRIKCCSS 218
           ++V+GG  G ++ +P +GE IN+K D S L R+ CCS+
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Clc07G09730 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 318.2 bits (814), Expect = 5.3e-87
Identity = 157/220 (71.36%), Postives = 193/220 (87.73%), Query Frame = 0


Query: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
           MA YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++VD K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
           +M VGNK+DLRHL AV TED K++AERE+ +F+ETSALE++NVE AF EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAVEGGENGSASSVPAQGEKINI---KDESGLNRIKCCSS 218
           KA++ G++ +A     +G+ IN+    D S + ++ CCS+
Sbjct: 181 KALDIGDDPAAL---PKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Clc07G09730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982677.1	6.6e-116	100.00	ras-related protein RABA1b-like [Cucurbita maxima] >XP_023516511.1 ras-related p...	[more]
XP_004137233.1	1.5e-115	99.54	ras-related protein RABA1b [Cucumis sativus] >KGN53569.1 hypothetical protein Cs...	[more]
XP_022942927.1	1.5e-115	99.54	ras-related protein RABA1b-like [Cucurbita moschata]	[more]
XP_022142868.1	3.3e-115	99.54	ras-related protein Rab11D-like [Momordica charantia]	[more]
XP_008451755.1	3.3e-115	99.08	PREDICTED: ras-related protein RABA1b-like [Cucumis melo]	[more]

BLAST of Clc07G09730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39222	2.2e-98	85.78	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]
Q40194	2.2e-98	81.65	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q01111	1.0e-95	80.73	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q40195	1.3e-95	79.82	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
Q9FK68	6.7e-95	81.65	Ras-related protein RABA1c OS=Arabidopsis thaliana OX=3702 GN=RABA1C PE=1 SV=1	[more]

BLAST of Clc07G09730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IX83	3.2e-116	100.00	ras-related protein RABA1b-like OS=Cucurbita maxima OX=3661 GN=LOC111481478 PE=4...	[more]
A0A0A0KXK6	7.1e-116	99.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G082460 PE=4 SV=1	[more]
A0A6J1FRL8	7.1e-116	99.54	ras-related protein RABA1b-like OS=Cucurbita moschata OX=3662 GN=LOC111447812 PE...	[more]
A0A6J1CPC3	1.6e-115	99.54	ras-related protein Rab11D-like OS=Momordica charantia OX=3673 GN=LOC111012877 P...	[more]
A0A1S3BSA1	1.6e-115	99.08	ras-related protein RABA1b-like OS=Cucumis melo OX=3656 GN=LOC103492947 PE=4 SV=...	[more]

BLAST of Clc07G09730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16920.1	1.6e-99	85.78	RAB GTPase homolog A1B	[more]
AT4G18800.1	4.8e-96	80.65	RAB GTPase homolog A1D	[more]
AT5G45750.1	4.8e-96	81.65	RAB GTPase homolog A1C	[more]
AT1G06400.1	1.1e-92	77.06	Ras-related small GTP-binding family protein	[more]
AT5G60860.1	5.3e-87	71.36	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 54.63 coord: 14..35 score: 55.22 coord: 117..130 score: 53.64 coord: 37..53 score: 36.7 coord: 152..174 score: 41.61
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 6.6E-6 score: 34.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 4.5E-26 score: 102.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.4E-109 score: 380.1
None	No IPR available	PANTHER	PTHR24073:SF1156	RAS-RELATED PROTEIN RABA1B	coord: 1..217
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..217
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..215 score: 35.734577
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..175 score: 9.664
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 1.63072E-127 score: 354.944
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 2.8E-12 score: 37.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 2.1E-61 score: 206.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..217 score: 16.017019
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..215 e-value: 1.5E-71 score: 241.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 3.0E-40 score: 135.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G09730.1	Clc07G09730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042538	hyperosmotic salinity response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0060627	regulation of vesicle-mediated transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding