Clc07G08040 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G08040
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Location	ClcChr07: 21211967 .. 21215430 (-)
RNA-Seq Expression	Clc07G08040
Synteny	Clc07G08040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGAGTTTGGGTGGTCAATTCTAATCGACACTCTTGGTCTAAAGGTTGGTCAATCAAGGGTTTTGATTTGAATATTTTGGACCATATATTAATCAAGAAAATAAATAAACAAAGAGCGAGAATATTTGGAACCATAATCAAGATTCTCGGTCCCTAACGGTTGGTCAATCAAAGGTTTTGATTTGAATTAGTGCGTGCAACTTCACTTGTGTCCGCGCCAAAAGAAGAAAGAACATGCTCGGACCGCAATGTGTCTGAAGGCCAAATCTTCACAAATGTTCAAGCAATGCGTTCCCCAATCGTTAAACTTATGTACGTTGCTAACCCCTTTTCACGTTTCGGTTTGCCCACTTCGATTTTCTCTCTTTCTGCTTTGAACTCGCCTACCACCTCCTTCAGTCCCTGTTGTTCTGAAGGCCTCTGCTCCCTTGCCCACCAACTATTCGATGAATTGCCTAAAAGAGATATTCCCTCTCTTAATTCCCTTCTCACCTCCTATGTGCGTAGCCATCGCCAATCTGACGCATGGTCTCTCTTCTGTCGAATGCACCGCTCCTTCTCTGCTCTCACTGCCCACACTCTCACCGCTGCCTTGGCCGCGTGCTCGGCATTACCCACCTCCGAATATGGCCAACAAGTTCATGGGTTAGTCATCAGAACAGGTACGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGGATTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAGGTGAGGGATGTGGTTGCTTGGAATGCGTTGTTATCAAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCACTAAACGTGTTTAAAGAAATGAAGAGAGAAAAAGTGGCGTTTAGTGAATTTACTTTGTGTTCAGTGCTTAAAGCTTGTGCTGCCCTGAAAGATTTTCGGTTAGGCAAGCAAGTTCATGGGGTGGTTGTAGTGATGGATAGAGATATGCTTGTTTTGGGTACTGCCTTGGTTGATTTCTACTCTAGCGTTGGCTGTTTAAATGAAGCCATGAAAGTTTACACTAGTTTACATTGTAGAATGGATGATGTCATACTTAATTCTTTAATTTCTGGGTGTGTTAGGAATAAAAAATATGAAGTGGCCTTTTCCTTGATGAGCAAGATGAGACCTAACGCAATTGCACTAACAAGCGCCCTGGCTGCTTGCTCTGAGGATTCAGATCTATGGATAGGGAAGCAAATACACTGTGTTTCAGTCCGTCATGGTTTGACATCTAATACTCAGTTGTGCAATATTTTGCTCGATATGTATGCTAAATGTGGGAAAATTTTGCATGCTCGAACAGTGTTCGATGGAATGTGTCATAAGGATGTAGTATCTTGGAGCAGCATGATACAAGCATATGGAAGTCATGGAGATGGGCTAAAAGCTTTCGAACTGTTCAAGATGATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTTACATTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGCTGGTGCAACAGGGACAAGAATGTTTTTATTTGGCAAAGGAGAAGTATAGTTCATATCTAGGTCCGGAACACTATGCCTGCTTCATAGATATATTAGGCCGAGCTGGTAAGATTGATGAAATATGGAGTCTGTTCCATGATATGGAAACGTGTGGTATTAAGATTACTTCAAAATTATGGGCAGCACTACTTAATGCTTGTAGTCACAACCAAGATGTTTCCAGAGGTGAGTTTGCTGCTAAAAAACTCCTCCAATTGGATCCGAACAAGGCAGGGAATTATGTGCTGTCGTCAAATTTCTATGCATCAATAGGAAAGTGGGATTCAGTAGATGAATTGAGGAGAATCATGAGAGCAAAAGGACTGACTAAGGAAGCTGGGAATAGCTTGGTCACTTCTTCTTGCTTCTAATGCAGGATGAGAGAATTGGCTCGTCTATAATATGATAGCCAAAAGAAACGGCTGTTTTTTATGTAGAAAAAGAAGGAACACCTTATTGTGAACTGAAGCATCAGGTTTAGTGTCACTCATTGTCGATCAAGACTGCCTAATTTAAACCTCACGTGCCTTTAACGACTGTCACTTAAGATGTTAACAAATATGTTCTTTGTCTGAAGCCTGAAGATAAGCAAACATTGTAGCTTGCTATTTTTCTGGTATGTAAGCTGCCTCAAATTGAATGTTTTCTGAATGTCTTGTTTAATTCGCTCTAATTTATTAGTATTATTATTATGTTGTTCCTGTGTGAGGGGAAAAGTTAAGAACAAAATCGAACTGGATGGGGCTTGTATAGAAACTTCGGATCTGAACGTTGCTTGATGTTACCGTAGGTGTAAATTATAATGTAAATGAGTACACTGTATCTTAAGCTTAACTTTGCCCTTTTGGTTTCTTTTACTTCCATATTGCGCCTTTGAGTATGGTTTCATCTTATAGAAATTCCCCTCTTTTTGTAGTAATATGAGACAACTATCATCAACGCAAAAGTGGGGCTTTGTCGGAGTATGTGGAGTGGATACTTTCAAACTTCCCAGCTTATTGTTTCAAGGTATCCCATGAACTGTAACCGTTTACTTTCCTTACTATCAATGCATTTGACCATTTGTTCACTCATCTCTAGCATCGAAGCGGCGATGGTGCCGACCTGATTTCTGATCTTACTAGGCACCCCCTTCTAAGGACTCCTGATCCTATGTATAAAAACGATTAAATTATCCATCATGCTTCAACAGTGCTTCTTATTTGGCTTGAAAATTCGTAGAAGGTTTATAAAACACAAGACCTCATACTTTGATATTATGTTAAATCACCAACTTTTGTTTGATCGATATTTTAACATGATATCAGAGCAAGAAATCTTGTTTTTGAATTCCTATCATGTAATACTCTCCCCAAGTATGGACGAGCATTGAAGTATTAATATCAGAACAGTACATGAGTGCATTATAAGTTACACCCATCTTGTTGTAGCCAATTTTGACCACACAGCAGAAAAAACTAAAAAAACATTTAAAAAAAAAAAATTGTCATGTGTCAAATGTAGTTAGACAATTGTGTAGATTGTCAAAAGATGGGCGTAGTCTAATATGTACCAAAATATTTTTCTTGATGTAATTAGGTCTTCTACAAATTCTCAAGCCCACAAGTGAAGAAGAGTGTTGAAGTTGTTAAGAAATCAACAATTAAAGCTGAATAGAAAACGTAAAGCAATAGAGAATCGACACACAAATTTACATGATTCACTAATAATGTGTTAGCTAATGGTGGGATATTGTTTTACGGGCTTCTAGTTGGTCTTTTACTTGTCAAAATACCATCTATGACATCTTTGCTTCATTGTTGATGGGTCAACCTTTTGGTGGTACAAAGAAGACAATTTGGTTGGCTCTAATGCATACTTTCTTTTGGAGTTTATGGGGTGAAAGGAATAGAAGGCTCTTTCATGA

mRNA sequence

GTTGGAGTTTGGGTGGTCAATTCTAATCGACACTCTTGGTCTAAAGGTTGGTCAATCAAGGGTTTTGATTTGAATATTTTGGACCATATATTAATCAAGAAAATAAATAAACAAAGAGCGAGAATATTTGGAACCATAATCAAGATTCTCGGTCCCTAACGGTTGGTCAATCAAAGGTTTTGATTTGAATTAGTGCGTGCAACTTCACTTGTGTCCGCGCCAAAAGAAGAAAGAACATGCTCGGACCGCAATGTGTCTGAAGGCCAAATCTTCACAAATGTTCAAGCAATGCGTTCCCCAATCGTTAAACTTATGTACGTTGCTAACCCCTTTTCACGTTTCGGTTTGCCCACTTCGATTTTCTCTCTTTCTGCTTTGAACTCGCCTACCACCTCCTTCAGTCCCTGTTGTTCTGAAGGCCTCTGCTCCCTTGCCCACCAACTATTCGATGAATTGCCTAAAAGAGATATTCCCTCTCTTAATTCCCTTCTCACCTCCTATGTGCGTAGCCATCGCCAATCTGACGCATGGTCTCTCTTCTGTCGAATGCACCGCTCCTTCTCTGCTCTCACTGCCCACACTCTCACCGCTGCCTTGGCCGCGTGCTCGGCATTACCCACCTCCGAATATGGCCAACAAGTTCATGGGTTAGTCATCAGAACAGGTACGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGGATTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAGGTGAGGGATGTGGTTGCTTGGAATGCGTTGTTATCAAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCACTAAACGTGTTTAAAGAAATGAAGAGAGAAAAAGTGGCGTTTAGTGAATTTACTTTGTGTTCAGTGCTTAAAGCTTGTGCTGCCCTGAAAGATTTTCGGTTAGGCAAGCAAGTTCATGGGGTGGTTGTAGTGATGGATAGAGATATGCTTGTTTTGGGTACTGCCTTGGTTGATTTCTACTCTAGCGTTGGCTGTTTAAATGAAGCCATGAAAGTTTACACTAGTTTACATTGTAGAATGGATGATGTCATACTTAATTCTTTAATTTCTGGGTGTGTTAGGAATAAAAAATATGAAGTGGCCTTTTCCTTGATGAGCAAGATGAGACCTAACGCAATTGCACTAACAAGCGCCCTGGCTGCTTGCTCTGAGGATTCAGATCTATGGATAGGGAAGCAAATACACTGTGTTTCAGTCCGTCATGGTTTGACATCTAATACTCAGTTGTGCAATATTTTGCTCGATATGTATGCTAAATGTGGGAAAATTTTGCATGCTCGAACAGTGTTCGATGGAATGTGTCATAAGGATGTAGTATCTTGGAGCAGCATGATACAAGCATATGGAAGTCATGGAGATGGGCTAAAAGCTTTCGAACTGTTCAAGATGATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTTACATTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGCTGGTGCAACAGGGACAAGAATGTTTTTATTTGGCAAAGGAGAAGTATAGTTCATATCTAGGTCCGGAACACTATGCCTGCTTCATAGATATATTAGGCCGAGCTGGTAAGATTGATGAAATATGGAGTCTGTTCCATGATATGGAAACGTGTGGTATTAAGATTACTTCAAAATTATGGGCAGCACTACTTAATGCTTGTAGTCACAACCAAGATGTTTCCAGAGGTGAGTTTGCTGCTAAAAAACTCCTCCAATTGGATCCGAACAAGGCAGGGAATTATGTGCTGTCGTCAAATTTCTATGCATCAATAGGAAAGTGGGATTCAGTAGATGAATTGAGGAGAATCATGAGAGCAAAAGGACTGACTAAGGAAGCTGGGAATAGCTTGGTCACTTCTTCTTGCTTCTAATGCAGGATGAGAGAATTGGCTCGTCTATAATATGATAGCCAAAAGAAACGGCTGTTTTTTATGTAGAAAAAGAAGGAACACCTTATTGTGAACTGAAGCATCAGGTTTAGTGTCACTCATTGTCGATCAAGACTGCCTAATTTAAACCTCACGTGCCTTTAACGACTGTCACTTAAGATGTTAACAAATATGTTCTTTGTCTGAAGCCTGAAGATAAGCAAACATTGTAGCTTGCTATTTTTCTGTAATATGAGACAACTATCATCAACGCAAAAGTGGGGCTTTGTCGGAGTATGTGGAGTGGATACTTTCAAACTTCCCAGCTTATTGTTTCAAGGTATCCCATGAACTGTAACCGTTTACTTTCCTTACTATCAATGCATTTGACCATTTGTTCACTCATCTCTAGCATCGAAGCGGCGATGGTGCCGACCTGATTTCTGATCTTACTAGGCACCCCCTTCTAAGGACTCCTGATCCTATGTATAAAAACGATTAAATTATCCATCATGCTTCAACAGTGCTTCTTATTTGGCTTGAAAATTCGTAGAAGGTTTATAAAACACAAGACCTCATACTTTGATATTATGTTAAATCACCAACTTTTGTTTGATCGATATTTTAACATGATATCAGAGCAAGAAATCTTGTTTTTGAATTCCTATCATGTAATACTCTCCCCAAGTATGGACGAGCATTGAAGTATTAATATCAGAACAGTACATGAGTGCATTATAAGTTACACCCATCTTGTTGTAGCCAATTTTGACCACACAGCAGAAAAAACTAAAAAAACATTTAAAAAAAAAAAATTGTCATGTGTCAAATGTAGTTAGACAATTGTGTAGATTGTCAAAAGATGGGCGTAGTCTAATATGTACCAAAATATTTTTCTTGATGTAATTAGGTCTTCTACAAATTCTCAAGCCCACAAGTGAAGAAGAGTGTTGAAGTTGTTAAGAAATCAACAATTAAAGCTGAATAGAAAACGTAAAGCAATAGAGAATCGACACACAAATTTACATGATTCACTAATAATGTGTTAGCTAATGGTGGGATATTGTTTTACGGGCTTCTAGTTGGTCTTTTACTTGTCAAAATACCATCTATGACATCTTTGCTTCATTGTTGATGGGTCAACCTTTTGGTGGTACAAAGAAGACAATTTGGTTGGCTCTAATGCATACTTTCTTTTGGAGTTTATGGGGTGAAAGGAATAGAAGGCTCTTTCATGA

Coding sequence (CDS)

ATGCGTTCCCCAATCGTTAAACTTATGTACGTTGCTAACCCCTTTTCACGTTTCGGTTTGCCCACTTCGATTTTCTCTCTTTCTGCTTTGAACTCGCCTACCACCTCCTTCAGTCCCTGTTGTTCTGAAGGCCTCTGCTCCCTTGCCCACCAACTATTCGATGAATTGCCTAAAAGAGATATTCCCTCTCTTAATTCCCTTCTCACCTCCTATGTGCGTAGCCATCGCCAATCTGACGCATGGTCTCTCTTCTGTCGAATGCACCGCTCCTTCTCTGCTCTCACTGCCCACACTCTCACCGCTGCCTTGGCCGCGTGCTCGGCATTACCCACCTCCGAATATGGCCAACAAGTTCATGGGTTAGTCATCAGAACAGGTACGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGGATTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAGGTGAGGGATGTGGTTGCTTGGAATGCGTTGTTATCAAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCACTAAACGTGTTTAAAGAAATGAAGAGAGAAAAAGTGGCGTTTAGTGAATTTACTTTGTGTTCAGTGCTTAAAGCTTGTGCTGCCCTGAAAGATTTTCGGTTAGGCAAGCAAGTTCATGGGGTGGTTGTAGTGATGGATAGAGATATGCTTGTTTTGGGTACTGCCTTGGTTGATTTCTACTCTAGCGTTGGCTGTTTAAATGAAGCCATGAAAGTTTACACTAGTTTACATTGTAGAATGGATGATGTCATACTTAATTCTTTAATTTCTGGGTGTGTTAGGAATAAAAAATATGAAGTGGCCTTTTCCTTGATGAGCAAGATGAGACCTAACGCAATTGCACTAACAAGCGCCCTGGCTGCTTGCTCTGAGGATTCAGATCTATGGATAGGGAAGCAAATACACTGTGTTTCAGTCCGTCATGGTTTGACATCTAATACTCAGTTGTGCAATATTTTGCTCGATATGTATGCTAAATGTGGGAAAATTTTGCATGCTCGAACAGTGTTCGATGGAATGTGTCATAAGGATGTAGTATCTTGGAGCAGCATGATACAAGCATATGGAAGTCATGGAGATGGGCTAAAAGCTTTCGAACTGTTCAAGATGATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTTACATTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGCTGGTGCAACAGGGACAAGAATGTTTTTATTTGGCAAAGGAGAAGTATAGTTCATATCTAGGTCCGGAACACTATGCCTGCTTCATAGATATATTAGGCCGAGCTGGTAAGATTGATGAAATATGGAGTCTGTTCCATGATATGGAAACGTGTGGTATTAAGATTACTTCAAAATTATGGGCAGCACTACTTAATGCTTGTAGTCACAACCAAGATGTTTCCAGAGGTGAGTTTGCTGCTAAAAAACTCCTCCAATTGGATCCGAACAAGGCAGGGAATTATGTGCTGTCGTCAAATTTCTATGCATCAATAGGAAAGTGGGATTCAGTAGATGAATTGAGGAGAATCATGAGAGCAAAAGGACTGACTAAGGAAGCTGGGAATAGCTTGGTCACTTCTTCTTGCTTCTAA

Protein sequence

MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSLVTSSCF

Homology

[Close]

BLAST of Clc07G08040 vs. NCBI nr
Match: XP_038901893.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Benincasa hispida])

HSP 1 Score: 969.5 bits (2505), Expect = 1.2e-278
Identity = 483/546 (88.46%), Postives = 514/546 (94.14%), Query Frame = 0


Query: 1   MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
           MRSPIVK +YV+NPFSR  LP SI S SALNS  TSF PC SEGLCSLA QLFDELP+RD
Sbjct: 31  MRSPIVKPLYVSNPFSRLCLPISISSRSALNSHPTSFHPCYSEGLCSLARQLFDELPQRD 90

Query: 61  IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
           IPSLNSLL S+VR +R SDAWSLFCRMHRS SALTAHTLTAALAACSALPTS YGQQVHG
Sbjct: 91  IPSLNSLLISFVRGYRHSDAWSLFCRMHRS-SALTAHTLTAALAACSALPTSGYGQQVHG 150

Query: 121 LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
           L+I++ TYSGI+TKTAILDMYSKCG+LDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE
Sbjct: 151 LIIKSDTYSGIITKTAILDMYSKCGLLDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 210

Query: 181 ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
           ALNVF+EMKREKV FSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRD+LVLGTALVDF
Sbjct: 211 ALNVFEEMKREKVVFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDILVLGTALVDF 270

Query: 241 YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
           YSSVGC++EAMKVYTSL+CR DD++LNSLISGCV+NKKYE AFSLMSKMRPNAIALTSAL
Sbjct: 271 YSSVGCISEAMKVYTSLNCRKDDIMLNSLISGCVKNKKYEEAFSLMSKMRPNAIALTSAL 330

Query: 301 AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
           AACSE+SDLW G+QIHCV VRHG  SNT LCNILLDMYAKCGKIL+A+TVFDGMCHKDVV
Sbjct: 331 AACSENSDLWRGRQIHCVLVRHGFASNTLLCNILLDMYAKCGKILNAQTVFDGMCHKDVV 390

Query: 361 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
           SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQE FY
Sbjct: 391 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQESFY 450

Query: 421 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
           LAKEK+SSYLGPEHYAC IDILGRAGKIDE+WS F+DME CG+KITSK+WAA+LNACSHN
Sbjct: 451 LAKEKFSSYLGPEHYACIIDILGRAGKIDEVWSTFNDMEMCGVKITSKVWAAVLNACSHN 510

Query: 481 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
           QDVSRGEFAAKKLLQ+D  KAGNYVL+SNFYASIGKWDSVDE+RRIMRAKGLTKEAGNSL
Sbjct: 511 QDVSRGEFAAKKLLQMDSKKAGNYVLASNFYASIGKWDSVDEMRRIMRAKGLTKEAGNSL 570

Query: 541 VTSSCF 547
           VT SCF
Sbjct: 571 VT-SCF 574

[Close]

BLAST of Clc07G08040 vs. NCBI nr
Match: XP_022984423.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita maxima] >XP_022984424.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 960.7 bits (2482), Expect = 5.5e-276
Identity = 471/546 (86.26%), Postives = 512/546 (93.77%), Query Frame = 0


Query: 1   MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
           MRSPIVK +YV NPFSRF LP SI S SALNS TTSF+PCCSE  CS AHQLFDELP+RD
Sbjct: 1   MRSPIVKSLYVTNPFSRFCLPISIPSFSALNSATTSFNPCCSESFCSHAHQLFDELPQRD 60

Query: 61  IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
           IPSL SLLTSYVR HR SDAWSLF +MHRS S LTAHTLTAALAACSALPTS+YGQQVHG
Sbjct: 61  IPSLTSLLTSYVRGHRHSDAWSLFRQMHRSCSPLTAHTLTAALAACSALPTSDYGQQVHG 120

Query: 121 LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
           L+I+TGTYSGIVTKTAILDMYSKCG+LD SVKVFEEME++DVVAWNALLSSFLREGLA +
Sbjct: 121 LIIKTGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNALLSSFLREGLAGK 180

Query: 181 ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
           ALNVF+EMKREKV +SEFTLCSVLKACAALKDF+LGKQVHG+VVVMDRDMLVLGT+LVDF
Sbjct: 181 ALNVFEEMKREKVEYSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTSLVDF 240

Query: 241 YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
           YSSVGC++EAMKVYTSL+C  DD++LNSLISGCV NKKYE AFSLMSKMRPNAIALTSAL
Sbjct: 241 YSSVGCISEAMKVYTSLNCTKDDIMLNSLISGCVVNKKYEEAFSLMSKMRPNAIALTSAL 300

Query: 301 AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
           AACSE+SDLWIGKQIHC  VRHG+ SNTQLCN LLDMYAKCGKI +AR VFD M H+DVV
Sbjct: 301 AACSENSDLWIGKQIHCALVRHGMASNTQLCNTLLDMYAKCGKISNARIVFDEMRHRDVV 360

Query: 361 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
           SWSSMIQAYGSHGDGLKAFELFKMMV+G+TGVLPNSVTFLSVLSACGHSGLV+QGQECFY
Sbjct: 361 SWSSMIQAYGSHGDGLKAFELFKMMVDGKTGVLPNSVTFLSVLSACGHSGLVEQGQECFY 420

Query: 421 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
           LAKE+YSSYLGPEHYACFIDILGRAGKI+E+WS+FHDME CG+KITSKLWAALLNACSHN
Sbjct: 421 LAKERYSSYLGPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHN 480

Query: 481 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
           QDVSRGEFAAK+LL+L+PNKAGN+VL+SNFYASIGKW+SVDELRRIM  KGL+KEAGNSL
Sbjct: 481 QDVSRGEFAAKRLLRLEPNKAGNFVLASNFYASIGKWNSVDELRRIMWEKGLSKEAGNSL 540

Query: 541 VTSSCF 547
           V+SSCF
Sbjct: 541 VSSSCF 546

[Close]

BLAST of Clc07G08040 vs. NCBI nr
Match: KAG7015318.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 959.1 bits (2478), Expect = 1.6e-275
Identity = 470/546 (86.08%), Postives = 511/546 (93.59%), Query Frame = 0


Query: 1    MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
            MRSPI+K +YV NPFSRF LP  I SLS+LNS TTSF+PCCS+  CSLAHQLFD+LP+RD
Sbjct: 474  MRSPIIKSLYVTNPFSRFCLPILIPSLSSLNSATTSFNPCCSDSFCSLAHQLFDKLPQRD 533

Query: 61   IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
            IPSL S+LTSYVR HR SDAWSLF +MHRS S +TAHTLTAALAACSALPTS+YGQQVHG
Sbjct: 534  IPSLTSILTSYVRGHRHSDAWSLFRQMHRSCSPVTAHTLTAALAACSALPTSDYGQQVHG 593

Query: 121  LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
            L+I+TGTYSGIVTKTAILDMYSKCG+LD SVKVFEEME++DVVAWNALLSSFLREGLA E
Sbjct: 594  LIIKTGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNALLSSFLREGLAGE 653

Query: 181  ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
            ALNVF+EMKREKV  SEFTLCSVLKACAALKDF+LGKQVHG+VVVMDRDMLVLGTALVDF
Sbjct: 654  ALNVFEEMKREKVECSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTALVDF 713

Query: 241  YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
            YSSVGC++EAMKVYTSL C  DD++LNSLISGC  NKKYE AFSLMSKMRPNAIALTSAL
Sbjct: 714  YSSVGCISEAMKVYTSLDCIKDDIMLNSLISGCFVNKKYEEAFSLMSKMRPNAIALTSAL 773

Query: 301  AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
            AACSE+SDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGKIL+AR VFD M H+DVV
Sbjct: 774  AACSENSDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKILNARIVFDEMRHRDVV 833

Query: 361  SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
            SWSSMIQAYGSHGDGLKAFELFKMM++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFY
Sbjct: 834  SWSSMIQAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFY 893

Query: 421  LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
            LAKE+YSSYL PEHYACFIDILGRAGKI+E+WS+FHDME CG+KITSKLWAALLNACSHN
Sbjct: 894  LAKERYSSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHN 953

Query: 481  QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
            QDVSRGEFAAK+LL+LDPNKAGN+VL+SNFYASIGKWDSVDELRRIM  KGL+KEAGNSL
Sbjct: 954  QDVSRGEFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVDELRRIMWEKGLSKEAGNSL 1013

Query: 541  VTSSCF 547
            V+SSCF
Sbjct: 1014 VSSSCF 1019

[Close]

BLAST of Clc07G08040 vs. NCBI nr
Match: XP_023552813.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023552814.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023552815.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023552816.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 956.1 bits (2470), Expect = 1.3e-274
Identity = 470/546 (86.08%), Postives = 509/546 (93.22%), Query Frame = 0


Query: 1   MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
           MRSPI K +YV NPFSRF LP SI SLSALNS TTSF+PCCSE  CSLAHQLFDELP+RD
Sbjct: 1   MRSPIAKSLYVTNPFSRFCLPISIPSLSALNSATTSFNPCCSESFCSLAHQLFDELPRRD 60

Query: 61  IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
           IPSL SLLTSYVR HR SDAWSLF +MHRS S LTAHTLTAALAACSALPTS+YGQQVHG
Sbjct: 61  IPSLTSLLTSYVRGHRHSDAWSLFRQMHRSCSPLTAHTLTAALAACSALPTSDYGQQVHG 120

Query: 121 LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
           L+I+TGTYSGIVTKTAILDMYSKCG+LD SV+VFEEME++DVVAWNALLSSFLREGLA +
Sbjct: 121 LIIKTGTYSGIVTKTAILDMYSKCGLLDHSVQVFEEMELKDVVAWNALLSSFLREGLAGK 180

Query: 181 ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
           ALNVF+EMKREKV  SEFTLCSVLKACA LKDF+LGKQVHG+VVVMDRDMLVLGTALVDF
Sbjct: 181 ALNVFEEMKREKVECSEFTLCSVLKACAVLKDFQLGKQVHGMVVVMDRDMLVLGTALVDF 240

Query: 241 YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
           YS+VGC++EAMKVYTSL C  DD++LNSLISGCV NK+YE AFSLMSKMRPNAIALTSAL
Sbjct: 241 YSTVGCISEAMKVYTSLDCIKDDIMLNSLISGCVVNKQYEEAFSLMSKMRPNAIALTSAL 300

Query: 301 AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
           AACSE+SDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGKI +AR VFD M H+DVV
Sbjct: 301 AACSENSDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKISNARIVFDEMRHRDVV 360

Query: 361 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
           SWSSMIQAYGSHGDGLKAFELFKMM++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFY
Sbjct: 361 SWSSMIQAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFY 420

Query: 421 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
           LAKE+YSSYL PEHYACFIDILGRAGKI+E+WS+FHDME CG+KITSKLWAALLNACSHN
Sbjct: 421 LAKERYSSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHN 480

Query: 481 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
           QDVSRGEFAAK+LL+LDPNKAGN+VL+SNFYASIGKWDSV ELRRIM  KGL+KEAGNSL
Sbjct: 481 QDVSRGEFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVGELRRIMWEKGLSKEAGNSL 540

Query: 541 VTSSCF 547
           V+SSCF
Sbjct: 541 VSSSCF 546

[Close]

BLAST of Clc07G08040 vs. NCBI nr
Match: XP_022929203.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita moschata] >XP_022929204.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 951.4 bits (2458), Expect = 3.3e-273
Identity = 471/546 (86.26%), Postives = 508/546 (93.04%), Query Frame = 0


Query: 1   MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
           MRSPIVK +YV NPFSRF LP SI SLSALNS TTSF+PCCSE  CSLAHQLFDEL +RD
Sbjct: 1   MRSPIVKSLYVTNPFSRFCLPISIPSLSALNSVTTSFNPCCSESFCSLAHQLFDELAQRD 60

Query: 61  IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
           IPSL SLL+SYVR HR SDAWSLF +MHRS S +TAHTLTAALAACSAL TS+YGQQVHG
Sbjct: 61  IPSLTSLLSSYVRGHRHSDAWSLFRQMHRSCSPVTAHTLTAALAACSALLTSDYGQQVHG 120

Query: 121 LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
           L+I+TGTYSGIVTKTAILDMYSKCG+LD SVKVFEEME++DVVAWN LLSSFLREGLA E
Sbjct: 121 LIIKTGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNTLLSSFLREGLAGE 180

Query: 181 ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
           ALNVF+EMKREKV  SEFTLCSVLKACAALKDF+LGKQVHG+VVVMDRDMLVLGTALVDF
Sbjct: 181 ALNVFEEMKREKVECSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTALVDF 240

Query: 241 YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
           YSSVGC++EAMKVYTSL C  DD++LNSLISGC  NKKYE AFSLMSKMRPNAIALTSAL
Sbjct: 241 YSSVGCISEAMKVYTSLDCIKDDIMLNSLISGCFVNKKYEEAFSLMSKMRPNAIALTSAL 300

Query: 301 AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
           AACSE+SDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGKIL+AR VFD M H+DVV
Sbjct: 301 AACSENSDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKILNARIVFDEMRHRDVV 360

Query: 361 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
           SWSSMIQAYGSHGDGLKAFELFKMM++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFY
Sbjct: 361 SWSSMIQAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFY 420

Query: 421 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
           LAKE+YSSYL PEHYACFIDILGRAGKI+E+WS+FHDME  G+KITSKLWAALLNACSHN
Sbjct: 421 LAKERYSSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMRGVKITSKLWAALLNACSHN 480

Query: 481 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
           QDVSRGEFAAK+LL+LDPNKAGN+VL+SNFYASIGKWDSVDELRRIM  KGL+KEAGNSL
Sbjct: 481 QDVSRGEFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVDELRRIMWEKGLSKEAGNSL 540

Query: 541 VTSSCF 547
           V+SSCF
Sbjct: 541 VSSSCF 546

[Close]

BLAST of Clc07G08040 vs. ExPASy Swiss-Prot
Match: Q9FJY9 (Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E38 PE=2 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 3.9e-160
Identity = 280/494 (56.68%), Postives = 369/494 (74.70%), Query Frame = 0


Query: 49  AHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSA 108
           A  LFDELP+RD+ SLNS L+S++RS   +D  +LF ++HR+   L++HT T  L ACS 
Sbjct: 37  ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96

Query: 109 LPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNAL 168
           L   E G+QVH L+I+ G  +G ++KTA++DMYSK G L DSV+VFE +E +D+V+WNAL
Sbjct: 97  LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156

Query: 169 LSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDR 228
           LS FLR G  +EAL VF  M RE+V  SEFTL SV+K CA+LK  + GKQVH +VVV  R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216

Query: 229 DMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSK 288
           D++VLGTA++ FYSSVG +NEAMKVY SL+   D+V+LNSLISGC+RN+ Y+ AF LMS+
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276

Query: 289 MRPNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHAR 348
            RPN   L+S+LA CS++SDLWIGKQIHCV++R+G  S+++LCN L+DMY KCG+I+ AR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336

Query: 349 TVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGH 408
           T+F  +  K VVSW+SMI AY  +GDG+KA E+F+ M E  +GVLPNSVTFL V+SAC H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396

Query: 409 SGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHD-METCGIKITS 468
           +GLV++G+ECF + KEKY    G EHY CFIDIL +AG+ +EIW L    ME     I  
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456

Query: 469 KLWAALLNACSHNQDVSRGEFAAKKLL-QLDPNKAGNYVLSSNFYASIGKWDSVDELRRI 528
            +W A+L+ACS N D++RGE+ A++L+ +  P  A  YVL SNFYA++GKWD V+ELR  
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516

Query: 529 MRAKGLTKEAGNSL 541
           ++ KGL K AG+SL
Sbjct: 517 LKNKGLVKTAGHSL 530

[Close]

BLAST of Clc07G08040 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.0e-87
Identity = 184/541 (34.01%), Postives = 302/541 (55.82%), Query Frame = 0


Query: 44  GLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAAL 103
           G    A  LF  +P+RD  + NS+++ + +  R  +A   F  MH+    L  ++  + L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 104 AACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVV 163
           +ACS L     G QVH L+ ++   S +   +A++DMYSKCG ++D+ +VF+EM  R+VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219

Query: 164 AWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVV 223
           +WN+L++ F + G A EAL+VF+ M   +V   E TL SV+ ACA+L   ++G++VHG V
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279

Query: 224 VVMD--RDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCR--------------------- 283
           V  D  R+ ++L  A VD Y+    + EA  ++ S+  R                     
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339

Query: 284 ---------MDDVILNSLISGCVRNKKYEVAFSLMSKMR-----PNAIALTSALAACSED 343
                     + V  N+LI+G  +N + E A SL   ++     P   +  + L AC++ 
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399

Query: 344 SDLWIGKQIHCVSVRHGL------TSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 403
           ++L +G Q H   ++HG         +  + N L+DMY KCG +     VF  M  +D V
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459

Query: 404 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 463
           SW++MI  +  +G G +A ELF+ M+E  +G  P+ +T + VLSACGH+G V++G+  F 
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLE--SGEKPDHITMIGVLSACGHAGFVEEGRHYFS 519

Query: 464 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 523
                +      +HY C +D+LGRAG ++E  S+  +M    ++  S +W +LL AC  +
Sbjct: 520 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWGSLLAACKVH 579

Query: 524 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 542
           ++++ G++ A+KLL+++P+ +G YVL SN YA +GKW+ V  +R+ MR +G+TK+ G S 
Sbjct: 580 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 635

[Close]

BLAST of Clc07G08040 vs. ExPASy Swiss-Prot
Match: Q9FLZ9 (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 8.7e-83
Identity = 174/508 (34.25%), Postives = 275/508 (54.13%), Query Frame = 0


Query: 44  GLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAAL 103
           G   +A  +FD +  RD+ S N++++ Y R+   +DA  +F  M      L   T+ + L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225

Query: 104 AACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVV 163
             C  L   E G+ VH LV        I  K A+++MY KCG +D++  VF+ ME RDV+
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285

Query: 164 AWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVV 223
            W  +++ +  +G  E AL + + M+ E V  +  T+ S++  C        GK +HG  
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345

Query: 224 VVMD-RDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVA 283
           V       +++ T+L+  Y+    ++   +V++    +      +++I+GCV+N+    A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGA-SKYHTGPWSAIIAGCVQNELVSDA 405

Query: 284 FSLMSKMR-----PNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDM 343
             L  +MR     PN   L S L A +  +DL     IHC   + G  S+      L+ +
Sbjct: 406 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 465

Query: 344 YAKCGKILHARTVFDGMCH----KDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVL 403
           Y+KCG +  A  +F+G+      KDVV W ++I  YG HGDG  A ++F  MV  R+GV 
Sbjct: 466 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV--RSGVT 525

Query: 404 PNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWS 463
           PN +TF S L+AC HSGLV++G   F    E Y +     HY C +D+LGRAG++DE ++
Sbjct: 526 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 585

Query: 464 LFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYAS 523
           L   + T   + TS +W ALL AC  +++V  GE AA KL +L+P   GNYVL +N YA+
Sbjct: 586 L---ITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 645

Query: 524 IGKWDSVDELRRIMRAKGLTKEAGNSLV 542
           +G+W  ++++R +M   GL K+ G+S +
Sbjct: 646 LGRWKDMEKVRSMMENVGLRKKPGHSTI 667

[Close]

BLAST of Clc07G08040 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.3e-81
Identity = 175/500 (35.00%), Postives = 287/500 (57.40%), Query Frame = 0


Query: 49  AHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSA 108
           A ++FD +P+RD+ S N+++  Y ++     A  +   M       +  T+ + L A SA
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 109 LPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNAL 168
           L     G+++HG  +R+G  S +   TA++DMY+KCG L+ + ++F+ M  R+VV+WN++
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 169 LSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVH--GVVVVM 228
           + ++++    +EA+ +F++M  E V  ++ ++   L ACA L D   G+ +H   V + +
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 229 DRDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLM 288
           DR++ V+  +L+  Y     ++ A  ++  L  R   V  N++I G  +N +   A +  
Sbjct: 369 DRNVSVV-NSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYF 428

Query: 289 SKMR-----PNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKC 348
           S+MR     P+     S + A +E S     K IH V +R  L  N  +   L+DMYAKC
Sbjct: 429 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 488

Query: 349 GKILHARTVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLS 408
           G I+ AR +FD M  + V +W++MI  YG+HG G  A ELF+ M +G   + PN VTFLS
Sbjct: 489 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLS 548

Query: 409 VLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETC 468
           V+SAC HSGLV+ G +CFY+ KE YS  L  +HY   +D+LGRAG+++E W     M   
Sbjct: 549 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP-- 608

Query: 469 GIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVD 528
            +K    ++ A+L AC  +++V+  E AA++L +L+P+  G +VL +N Y +   W+ V 
Sbjct: 609 -VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVG 668

Query: 529 ELRRIMRAKGLTKEAGNSLV 542
           ++R  M  +GL K  G S+V
Sbjct: 669 QVRVSMLRQGLRKTPGCSMV 681

[Close]

BLAST of Clc07G08040 vs. ExPASy Swiss-Prot
Match: Q7XJN6 (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E26 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.0e-80
Identity = 180/516 (34.88%), Postives = 281/516 (54.46%), Query Frame = 0


Query: 37  FSPCCSEGLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTA 96
           +S C   G+   A  +F  +  + +   N+++ +Y  +     A  LF  M +      +
Sbjct: 317 YSKC---GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 376

Query: 97  HTLTAALAACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEE 156
            TL+  ++ CS L    YG+ VH  + +    S    ++A+L +YSKCG   D+  VF+ 
Sbjct: 377 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 436

Query: 157 MEVRDVVAWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFT--LCSVLKACAALKDFR 216
           ME +D+VAW +L+S   + G  +EAL VF +MK +  +    +  + SV  ACA L+  R
Sbjct: 437 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 496

Query: 217 LGKQVHGVVVVMDRDMLV-LGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGC 276
            G QVHG ++     + V +G++L+D YS  G    A+KV+TS+    + V  NS+IS  
Sbjct: 497 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISCY 556

Query: 277 VRNKKYEVAFSLMSKMR-----PNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNT 336
            RN   E++  L + M      P+++++TS L A S  + L  GK +H  ++R G+ S+T
Sbjct: 557 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 616

Query: 337 QLCNILLDMYAKCGKILHARTVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEG 396
            L N L+DMY KCG   +A  +F  M HK +++W+ MI  YGSHGD + A  LF  M   
Sbjct: 617 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM--K 676

Query: 397 RTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKI 456
           + G  P+ VTFLS++SAC HSG V++G+  F   K+ Y      EHYA  +D+LGRAG +
Sbjct: 677 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 736

Query: 457 DEIWSLFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSS 516
           +E +S    M    I+  S +W  LL+A   + +V  G  +A+KLL+++P +   YV   
Sbjct: 737 EEAYSFIKAMP---IEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 796

Query: 517 NFYASIGKWDSVDELRRIMRAKGLTKEAGNSLVTSS 545
           N Y   G  +   +L  +M+ KGL K+ G S +  S
Sbjct: 797 NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823

[Close]

BLAST of Clc07G08040 vs. ExPASy TrEMBL
Match: A0A6J1JAF9 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482726 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 2.6e-276
Identity = 471/546 (86.26%), Postives = 512/546 (93.77%), Query Frame = 0


Query: 1   MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
           MRSPIVK +YV NPFSRF LP SI S SALNS TTSF+PCCSE  CS AHQLFDELP+RD
Sbjct: 1   MRSPIVKSLYVTNPFSRFCLPISIPSFSALNSATTSFNPCCSESFCSHAHQLFDELPQRD 60

Query: 61  IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
           IPSL SLLTSYVR HR SDAWSLF +MHRS S LTAHTLTAALAACSALPTS+YGQQVHG
Sbjct: 61  IPSLTSLLTSYVRGHRHSDAWSLFRQMHRSCSPLTAHTLTAALAACSALPTSDYGQQVHG 120

Query: 121 LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
           L+I+TGTYSGIVTKTAILDMYSKCG+LD SVKVFEEME++DVVAWNALLSSFLREGLA +
Sbjct: 121 LIIKTGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNALLSSFLREGLAGK 180

Query: 181 ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
           ALNVF+EMKREKV +SEFTLCSVLKACAALKDF+LGKQVHG+VVVMDRDMLVLGT+LVDF
Sbjct: 181 ALNVFEEMKREKVEYSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTSLVDF 240

Query: 241 YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
           YSSVGC++EAMKVYTSL+C  DD++LNSLISGCV NKKYE AFSLMSKMRPNAIALTSAL
Sbjct: 241 YSSVGCISEAMKVYTSLNCTKDDIMLNSLISGCVVNKKYEEAFSLMSKMRPNAIALTSAL 300

Query: 301 AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
           AACSE+SDLWIGKQIHC  VRHG+ SNTQLCN LLDMYAKCGKI +AR VFD M H+DVV
Sbjct: 301 AACSENSDLWIGKQIHCALVRHGMASNTQLCNTLLDMYAKCGKISNARIVFDEMRHRDVV 360

Query: 361 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
           SWSSMIQAYGSHGDGLKAFELFKMMV+G+TGVLPNSVTFLSVLSACGHSGLV+QGQECFY
Sbjct: 361 SWSSMIQAYGSHGDGLKAFELFKMMVDGKTGVLPNSVTFLSVLSACGHSGLVEQGQECFY 420

Query: 421 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
           LAKE+YSSYLGPEHYACFIDILGRAGKI+E+WS+FHDME CG+KITSKLWAALLNACSHN
Sbjct: 421 LAKERYSSYLGPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHN 480

Query: 481 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
           QDVSRGEFAAK+LL+L+PNKAGN+VL+SNFYASIGKW+SVDELRRIM  KGL+KEAGNSL
Sbjct: 481 QDVSRGEFAAKRLLRLEPNKAGNFVLASNFYASIGKWNSVDELRRIMWEKGLSKEAGNSL 540

Query: 541 VTSSCF 547
           V+SSCF
Sbjct: 541 VSSSCF 546

[Close]

BLAST of Clc07G08040 vs. ExPASy TrEMBL
Match: A0A6J1EN39 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435866 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.6e-273
Identity = 471/546 (86.26%), Postives = 508/546 (93.04%), Query Frame = 0


Query: 1   MRSPIVKLMYVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRD 60
           MRSPIVK +YV NPFSRF LP SI SLSALNS TTSF+PCCSE  CSLAHQLFDEL +RD
Sbjct: 1   MRSPIVKSLYVTNPFSRFCLPISIPSLSALNSVTTSFNPCCSESFCSLAHQLFDELAQRD 60

Query: 61  IPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHG 120
           IPSL SLL+SYVR HR SDAWSLF +MHRS S +TAHTLTAALAACSAL TS+YGQQVHG
Sbjct: 61  IPSLTSLLSSYVRGHRHSDAWSLFRQMHRSCSPVTAHTLTAALAACSALLTSDYGQQVHG 120

Query: 121 LVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEE 180
           L+I+TGTYSGIVTKTAILDMYSKCG+LD SVKVFEEME++DVVAWN LLSSFLREGLA E
Sbjct: 121 LIIKTGTYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVVAWNTLLSSFLREGLAGE 180

Query: 181 ALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDF 240
           ALNVF+EMKREKV  SEFTLCSVLKACAALKDF+LGKQVHG+VVVMDRDMLVLGTALVDF
Sbjct: 181 ALNVFEEMKREKVECSEFTLCSVLKACAALKDFQLGKQVHGMVVVMDRDMLVLGTALVDF 240

Query: 241 YSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSAL 300
           YSSVGC++EAMKVYTSL C  DD++LNSLISGC  NKKYE AFSLMSKMRPNAIALTSAL
Sbjct: 241 YSSVGCISEAMKVYTSLDCIKDDIMLNSLISGCFVNKKYEEAFSLMSKMRPNAIALTSAL 300

Query: 301 AACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 360
           AACSE+SDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGKIL+AR VFD M H+DVV
Sbjct: 301 AACSENSDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKILNARIVFDEMRHRDVV 360

Query: 361 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 420
           SWSSMIQAYGSHGDGLKAFELFKMM++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFY
Sbjct: 361 SWSSMIQAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFY 420

Query: 421 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 480
           LAKE+YSSYL PEHYACFIDILGRAGKI+E+WS+FHDME  G+KITSKLWAALLNACSHN
Sbjct: 421 LAKERYSSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMRGVKITSKLWAALLNACSHN 480

Query: 481 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 540
           QDVSRGEFAAK+LL+LDPNKAGN+VL+SNFYASIGKWDSVDELRRIM  KGL+KEAGNSL
Sbjct: 481 QDVSRGEFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVDELRRIMWEKGLSKEAGNSL 540

Query: 541 VTSSCF 547
           V+SSCF
Sbjct: 541 VSSSCF 546

[Close]

BLAST of Clc07G08040 vs. ExPASy TrEMBL
Match: A0A0A0KUI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046580 PE=4 SV=1)

HSP 1 Score: 946.4 bits (2445), Expect = 5.2e-272
Identity = 467/536 (87.13%), Postives = 503/536 (93.84%), Query Frame = 0


Query: 11  VANPFSRFGLPTSIFSLSALNSPTTS-FSPCCSEGLCSLAHQLFDELPKRDIPSLNSLLT 70
           VA PFSR   P  I SLSA NSPTT+ F+PC S+GLC LAHQLFDELP+ DIPSLNSLLT
Sbjct: 6   VAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNSLLT 65

Query: 71  SYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHGLVIRTGTYS 130
           SYVR  RQSDAWSLF RMHRSFS LTAHTLTA LAACSALPTS+YGQ VHGL+I+TG YS
Sbjct: 66  SYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTGAYS 125

Query: 131 GIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEEALNVFKEMK 190
           GIVTKTAILDMYSKCG+LDDSVKVFEEME+RDVVAWN+LLSSFLREGLAEEALNVF+EMK
Sbjct: 126 GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEMK 185

Query: 191 REKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDFYSSVGCLNE 250
           REKV FSEFTLCSVLKACAAL+D+RLGKQVHGVVVVM+RDMLVLGTALVDFYSSVGC++E
Sbjct: 186 REKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISE 245

Query: 251 AMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSALAACSEDSDL 310
           A+KVYTSL+CR DD+ILNSLISGCVRNK+YE AFSLMSKMRPNAIALTSAL ACSE+SDL
Sbjct: 246 AVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSENSDL 305

Query: 311 WIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVVSWSSMIQAY 370
           WIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGK+L+AR VFDGMCHK+VVSWSSMIQ Y
Sbjct: 306 WIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQTY 365

Query: 371 GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSY 430
           GSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 
Sbjct: 366 GSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSC 425

Query: 431 LGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFA 490
           LGPEHYACFID+LGRAGKIDE+WSLFHDME CG+KITSK+WAA+LNAC+HNQDVSRGEFA
Sbjct: 426 LGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFA 485

Query: 491 AKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTK-EAGNSLVTSS 545
           AKKLLQLDPNKAGNYVL+SNFYASIGKWDSVDELRR+M+AKGL K E   SL+ +S
Sbjct: 486 AKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLAS 541

[Close]

BLAST of Clc07G08040 vs. ExPASy TrEMBL
Match: A0A1S3BTV7 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493206 PE=4 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.3e-270
Identity = 461/536 (86.01%), Postives = 499/536 (93.10%), Query Frame = 0


Query: 10  YVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRDIPSLNSLLT 69
           +VA PFSR   P  I SLSA NSPTTSF+PC S+GLC LAH LFDE P+ DIPSLN  LT
Sbjct: 5   FVAKPFSRLCFPILISSLSAFNSPTTSFNPCSSQGLCYLAHHLFDEFPQTDIPSLNCRLT 64

Query: 70  SYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHGLVIRTGTYS 129
           SYVRS RQSDAWSLFCRMHRSFS LTAHTLTA LAACSALPTSEYG+ VHGL+I+TG Y 
Sbjct: 65  SYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIKTGAYP 124

Query: 130 GIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEEALNVFKEMK 189
           GIVTKTAILDMYSKCG+LDDSVKVFEEME+RDVVAWN+LLSSFLREGLAEEALNVF EMK
Sbjct: 125 GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFVEMK 184

Query: 190 REKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDFYSSVGCLNE 249
           REK+ FSEFTLCSVLKACAAL+DFRLGKQVHGVVVVM+RDMLVLGTALVDFYSSVGC++E
Sbjct: 185 REKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISE 244

Query: 250 AMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSALAACSEDSDL 309
           AMKVYTSL+CR DD++LNSLISGCVRNK+YE A SLMSKMRPNAIALTSAL ACSE+SDL
Sbjct: 245 AMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACSENSDL 304

Query: 310 WIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVVSWSSMIQAY 369
           WIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGK+L+ARTVFDGMCHK+VVSWSSMIQ Y
Sbjct: 305 WIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSSMIQTY 364

Query: 370 GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSY 429
           GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 
Sbjct: 365 GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSC 424

Query: 430 LGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFA 489
           LGPEHYACFID+LGRAGKID++WSLFHDMETCG+K+TS++WAA+LNACSHNQDV+RGEFA
Sbjct: 425 LGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVTRGEFA 484

Query: 490 AKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTK-EAGNSLVTSS 545
           A+KLLQLDPNKAGN+VL+SNFYASIGKWDSVDELRRIM AKGL K E   SL+ +S
Sbjct: 485 AQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLAS 540

[Close]

BLAST of Clc07G08040 vs. ExPASy TrEMBL
Match: A0A5D3D1V2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005070 PE=4 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.3e-270
Identity = 461/536 (86.01%), Postives = 499/536 (93.10%), Query Frame = 0


Query: 10  YVANPFSRFGLPTSIFSLSALNSPTTSFSPCCSEGLCSLAHQLFDELPKRDIPSLNSLLT 69
           +VA PFSR   P  I SLSA NSPTTSF+PC S+GLC LAH LFDE P+ DIPSLN  LT
Sbjct: 5   FVAKPFSRLCFPILISSLSAFNSPTTSFNPCSSQGLCYLAHHLFDEFPQTDIPSLNCRLT 64

Query: 70  SYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSALPTSEYGQQVHGLVIRTGTYS 129
           SYVRS RQSDAWSLFCRMHRSFS LTAHTLTA LAACSALPTSEYG+ VHGL+I+TG Y 
Sbjct: 65  SYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIKTGAYP 124

Query: 130 GIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNALLSSFLREGLAEEALNVFKEMK 189
           GIVTKTAILDMYSKCG+LDDSVKVFEEME+RDVVAWN+LLSSFLREGLAEEALNVF EMK
Sbjct: 125 GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFVEMK 184

Query: 190 REKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDRDMLVLGTALVDFYSSVGCLNE 249
           REK+ FSEFTLCSVLKACAAL+DFRLGKQVHGVVVVM+RDMLVLGTALVDFYSSVGC++E
Sbjct: 185 REKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISE 244

Query: 250 AMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSKMRPNAIALTSALAACSEDSDL 309
           AMKVYTSL+CR DD++LNSLISGCVRNK+YE A SLMSKMRPNAIALTSAL ACSE+SDL
Sbjct: 245 AMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACSENSDL 304

Query: 310 WIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVVSWSSMIQAY 369
           WIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGK+L+ARTVFDGMCHK+VVSWSSMIQ Y
Sbjct: 305 WIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSSMIQTY 364

Query: 370 GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSY 429
           GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSS 
Sbjct: 365 GSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSC 424

Query: 430 LGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFA 489
           LGPEHYACFID+LGRAGKID++WSLFHDMETCG+K+TS++WAA+LNACSHNQDV+RGEFA
Sbjct: 425 LGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVTRGEFA 484

Query: 490 AKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTK-EAGNSLVTSS 545
           A+KLLQLDPNKAGN+VL+SNFYASIGKWDSVDELRRIM AKGL K E   SL+ +S
Sbjct: 485 AQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLAS 540

[Close]

BLAST of Clc07G08040 vs. TAIR 10
Match: AT5G66500.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 566.2 bits (1458), Expect = 2.8e-161
Identity = 280/494 (56.68%), Postives = 369/494 (74.70%), Query Frame = 0


Query: 49  AHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSA 108
           A  LFDELP+RD+ SLNS L+S++RS   +D  +LF ++HR+   L++HT T  L ACS 
Sbjct: 37  ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96

Query: 109 LPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNAL 168
           L   E G+QVH L+I+ G  +G ++KTA++DMYSK G L DSV+VFE +E +D+V+WNAL
Sbjct: 97  LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156

Query: 169 LSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVVVVMDR 228
           LS FLR G  +EAL VF  M RE+V  SEFTL SV+K CA+LK  + GKQVH +VVV  R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216

Query: 229 DMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLMSK 288
           D++VLGTA++ FYSSVG +NEAMKVY SL+   D+V+LNSLISGC+RN+ Y+ AF LMS+
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276

Query: 289 MRPNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKILHAR 348
            RPN   L+S+LA CS++SDLWIGKQIHCV++R+G  S+++LCN L+DMY KCG+I+ AR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336

Query: 349 TVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGH 408
           T+F  +  K VVSW+SMI AY  +GDG+KA E+F+ M E  +GVLPNSVTFL V+SAC H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396

Query: 409 SGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHD-METCGIKITS 468
           +GLV++G+ECF + KEKY    G EHY CFIDIL +AG+ +EIW L    ME     I  
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456

Query: 469 KLWAALLNACSHNQDVSRGEFAAKKLL-QLDPNKAGNYVLSSNFYASIGKWDSVDELRRI 528
            +W A+L+ACS N D++RGE+ A++L+ +  P  A  YVL SNFYA++GKWD V+ELR  
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516

Query: 529 MRAKGLTKEAGNSL 541
           ++ KGL K AG+SL
Sbjct: 517 LKNKGLVKTAGHSL 530

[Close]

BLAST of Clc07G08040 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 324.7 bits (831), Expect = 1.4e-88
Identity = 184/541 (34.01%), Postives = 302/541 (55.82%), Query Frame = 0


Query: 44  GLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAAL 103
           G    A  LF  +P+RD  + NS+++ + +  R  +A   F  MH+    L  ++  + L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159

Query: 104 AACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVV 163
           +ACS L     G QVH L+ ++   S +   +A++DMYSKCG ++D+ +VF+EM  R+VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219

Query: 164 AWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVV 223
           +WN+L++ F + G A EAL+VF+ M   +V   E TL SV+ ACA+L   ++G++VHG V
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279

Query: 224 VVMD--RDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCR--------------------- 283
           V  D  R+ ++L  A VD Y+    + EA  ++ S+  R                     
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339

Query: 284 ---------MDDVILNSLISGCVRNKKYEVAFSLMSKMR-----PNAIALTSALAACSED 343
                     + V  N+LI+G  +N + E A SL   ++     P   +  + L AC++ 
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399

Query: 344 SDLWIGKQIHCVSVRHGL------TSNTQLCNILLDMYAKCGKILHARTVFDGMCHKDVV 403
           ++L +G Q H   ++HG         +  + N L+DMY KCG +     VF  M  +D V
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459

Query: 404 SWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFY 463
           SW++MI  +  +G G +A ELF+ M+E  +G  P+ +T + VLSACGH+G V++G+  F 
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLE--SGEKPDHITMIGVLSACGHAGFVEEGRHYFS 519

Query: 464 LAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETCGIKITSKLWAALLNACSHN 523
                +      +HY C +D+LGRAG ++E  S+  +M    ++  S +W +LL AC  +
Sbjct: 520 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWGSLLAACKVH 579

Query: 524 QDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVDELRRIMRAKGLTKEAGNSL 542
           ++++ G++ A+KLL+++P+ +G YVL SN YA +GKW+ V  +R+ MR +G+TK+ G S 
Sbjct: 580 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 635

[Close]

BLAST of Clc07G08040 vs. TAIR 10
Match: AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 309.3 bits (791), Expect = 6.2e-84
Identity = 174/508 (34.25%), Postives = 275/508 (54.13%), Query Frame = 0


Query: 44  GLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAAL 103
           G   +A  +FD +  RD+ S N++++ Y R+   +DA  +F  M      L   T+ + L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225

Query: 104 AACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVV 163
             C  L   E G+ VH LV        I  K A+++MY KCG +D++  VF+ ME RDV+
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285

Query: 164 AWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVHGVV 223
            W  +++ +  +G  E AL + + M+ E V  +  T+ S++  C        GK +HG  
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345

Query: 224 VVMD-RDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVA 283
           V       +++ T+L+  Y+    ++   +V++    +      +++I+GCV+N+    A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGA-SKYHTGPWSAIIAGCVQNELVSDA 405

Query: 284 FSLMSKMR-----PNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDM 343
             L  +MR     PN   L S L A +  +DL     IHC   + G  S+      L+ +
Sbjct: 406 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 465

Query: 344 YAKCGKILHARTVFDGMCH----KDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVL 403
           Y+KCG +  A  +F+G+      KDVV W ++I  YG HGDG  A ++F  MV  R+GV 
Sbjct: 466 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV--RSGVT 525

Query: 404 PNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWS 463
           PN +TF S L+AC HSGLV++G   F    E Y +     HY C +D+LGRAG++DE ++
Sbjct: 526 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 585

Query: 464 LFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYAS 523
           L   + T   + TS +W ALL AC  +++V  GE AA KL +L+P   GNYVL +N YA+
Sbjct: 586 L---ITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 645

Query: 524 IGKWDSVDELRRIMRAKGLTKEAGNSLV 542
           +G+W  ++++R +M   GL K+ G+S +
Sbjct: 646 LGRWKDMEKVRSMMENVGLRKKPGHSTI 667

[Close]

BLAST of Clc07G08040 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 305.4 bits (781), Expect = 8.9e-83
Identity = 175/500 (35.00%), Postives = 287/500 (57.40%), Query Frame = 0


Query: 49  AHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTAHTLTAALAACSA 108
           A ++FD +P+RD+ S N+++  Y ++     A  +   M       +  T+ + L A SA
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 109 LPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEEMEVRDVVAWNAL 168
           L     G+++HG  +R+G  S +   TA++DMY+KCG L+ + ++F+ M  R+VV+WN++
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 169 LSSFLREGLAEEALNVFKEMKREKVAFSEFTLCSVLKACAALKDFRLGKQVH--GVVVVM 228
           + ++++    +EA+ +F++M  E V  ++ ++   L ACA L D   G+ +H   V + +
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 229 DRDMLVLGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGCVRNKKYEVAFSLM 288
           DR++ V+  +L+  Y     ++ A  ++  L  R   V  N++I G  +N +   A +  
Sbjct: 369 DRNVSVV-NSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYF 428

Query: 289 SKMR-----PNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKC 348
           S+MR     P+     S + A +E S     K IH V +R  L  N  +   L+DMYAKC
Sbjct: 429 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 488

Query: 349 GKILHARTVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLS 408
           G I+ AR +FD M  + V +W++MI  YG+HG G  A ELF+ M +G   + PN VTFLS
Sbjct: 489 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLS 548

Query: 409 VLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKIDEIWSLFHDMETC 468
           V+SAC HSGLV+ G +CFY+ KE YS  L  +HY   +D+LGRAG+++E W     M   
Sbjct: 549 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP-- 608

Query: 469 GIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSSNFYASIGKWDSVD 528
            +K    ++ A+L AC  +++V+  E AA++L +L+P+  G +VL +N Y +   W+ V 
Sbjct: 609 -VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVG 668

Query: 529 ELRRIMRAKGLTKEAGNSLV 542
           ++R  M  +GL K  G S+V
Sbjct: 669 QVRVSMLRQGLRKTPGCSMV 681

[Close]

BLAST of Clc07G08040 vs. TAIR 10
Match: AT2G40720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 300.4 bits (768), Expect = 2.9e-81
Identity = 180/516 (34.88%), Postives = 281/516 (54.46%), Query Frame = 0


Query: 37  FSPCCSEGLCSLAHQLFDELPKRDIPSLNSLLTSYVRSHRQSDAWSLFCRMHRSFSALTA 96
           +S C   G+   A  +F  +  + +   N+++ +Y  +     A  LF  M +      +
Sbjct: 317 YSKC---GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 376

Query: 97  HTLTAALAACSALPTSEYGQQVHGLVIRTGTYSGIVTKTAILDMYSKCGILDDSVKVFEE 156
            TL+  ++ CS L    YG+ VH  + +    S    ++A+L +YSKCG   D+  VF+ 
Sbjct: 377 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 436

Query: 157 MEVRDVVAWNALLSSFLREGLAEEALNVFKEMKREKVAFSEFT--LCSVLKACAALKDFR 216
           ME +D+VAW +L+S   + G  +EAL VF +MK +  +    +  + SV  ACA L+  R
Sbjct: 437 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 496

Query: 217 LGKQVHGVVVVMDRDMLV-LGTALVDFYSSVGCLNEAMKVYTSLHCRMDDVILNSLISGC 276
            G QVHG ++     + V +G++L+D YS  G    A+KV+TS+    + V  NS+IS  
Sbjct: 497 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISCY 556

Query: 277 VRNKKYEVAFSLMSKMR-----PNAIALTSALAACSEDSDLWIGKQIHCVSVRHGLTSNT 336
            RN   E++  L + M      P+++++TS L A S  + L  GK +H  ++R G+ S+T
Sbjct: 557 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 616

Query: 337 QLCNILLDMYAKCGKILHARTVFDGMCHKDVVSWSSMIQAYGSHGDGLKAFELFKMMVEG 396
            L N L+DMY KCG   +A  +F  M HK +++W+ MI  YGSHGD + A  LF  M   
Sbjct: 617 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM--K 676

Query: 397 RTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSYLGPEHYACFIDILGRAGKI 456
           + G  P+ VTFLS++SAC HSG V++G+  F   K+ Y      EHYA  +D+LGRAG +
Sbjct: 677 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 736

Query: 457 DEIWSLFHDMETCGIKITSKLWAALLNACSHNQDVSRGEFAAKKLLQLDPNKAGNYVLSS 516
           +E +S    M    I+  S +W  LL+A   + +V  G  +A+KLL+++P +   YV   
Sbjct: 737 EEAYSFIKAMP---IEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 796

Query: 517 NFYASIGKWDSVDELRRIMRAKGLTKEAGNSLVTSS 545
           N Y   G  +   +L  +M+ KGL K+ G S +  S
Sbjct: 797 NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823

The following BLAST results are available for this feature:

BLAST of Clc07G08040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901893.1	1.2e-278	88.46	pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Benincasa ...	[more]
XP_022984423.1	5.5e-276	86.26	pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ...	[more]
KAG7015318.1	1.6e-275	86.08	Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper...	[more]
XP_023552813.1	1.3e-274	86.08	pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita ...	[more]
XP_022929203.1	3.3e-273	86.26	pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ...	[more]

BLAST of Clc07G08040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJY9	3.9e-160	56.68	Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidop...	[more]
Q9SIT7	2.0e-87	34.01	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9FLZ9	8.7e-83	34.25	Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX...	[more]
Q3E6Q1	1.3e-81	35.00	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q7XJN6	4.0e-80	34.88	Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana OX...	[more]

BLAST of Clc07G08040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAF9	2.6e-276	86.26	pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ...	[more]
A0A6J1EN39	1.6e-273	86.26	pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ...	[more]
A0A0A0KUI3	5.2e-272	87.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046580 PE=4 SV=1	[more]
A0A1S3BTV7	1.3e-270	86.01	pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Cucumis ...	[more]
A0A5D3D1V2	1.3e-270	86.01	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Clc07G08040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66500.1	2.8e-161	56.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	1.4e-88	34.01	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39350.1	6.2e-84	34.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	8.9e-83	35.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G40720.1	2.9e-81	34.88	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 314..415 e-value: 2.9E-23 score: 84.2 coord: 230..313 e-value: 1.9E-11 score: 45.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 63..229 e-value: 4.1E-30 score: 107.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 160..208 e-value: 1.2E-12 score: 47.8 coord: 357..406 e-value: 2.6E-9 score: 37.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 264..290 e-value: 2.5E-4 score: 21.1 coord: 435..463 e-value: 0.0022 score: 18.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 360..387 e-value: 2.5E-5 score: 22.2 coord: 435..466 e-value: 5.6E-6 score: 24.2 coord: 331..359 e-value: 2.2E-4 score: 19.2 coord: 265..290 e-value: 3.6E-4 score: 18.5 coord: 163..193 e-value: 9.0E-7 score: 26.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 358..392 score: 9.602157
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 262..296 score: 9.054091
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 431..465 score: 9.262356
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 161..195 score: 11.783455
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 274..542 coord: 32..273
None	No IPR available	PANTHER	PTHR47925:SF41	SUBFAMILY NOT NAMED	coord: 274..542 coord: 32..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G08040.1	Clc07G08040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding