Clc07G07400 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G07400
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	40S ribosomal protein S10-1-like
Location	ClcChr07: 19779558 .. 19788624 (+)
RNA-Seq Expression	Clc07G07400
Synteny	Clc07G07400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCAGTCACTCGAGCCTACAGGAACTCCTTCGCTGAGGTCTTGCTCTCGCTCTCGCTCGTCACTGCCATCGCCATTGTCTCGCTCGGTGGTCTAGCTCTCGGCTCGGGTAGGTCTCGCTCATCTTCGCTTCGTTGCCGTTCAAACGATAGATCTGTGTTGGTTGGTCGATCGTTTCTGAAGGGAATTGAATCCCAGCGGAAGTGTAGTTATTTTTCCAAAACATTTTCCTTGCTATGACTCTGGCAAGAATCCAGTGTGTGGGAACCGTTTCTTGAAAGAATAAGGGAACAGGAAGAAGAATTTTCTTAGAACTTTTCTAAGCAAATTAAGAGAATTTCTAGAGGAAAATTTTTAGAGTAATCGTAGAGCTTATTCTTCTAAAGAGGTGTATACCATGAGAGCTCCCAGGGTCCCTATTTATAGATGGCTATGGGTTACTCCTAATCATATTAGGATAACCTCAGAGATTTTAAAATAAATATTTAATAATATCTAATATTCATAAATATCTATCCAAATAATATATCATATTAAATGGTTTAAAATATTTAAATCTCATTTAAATATTTATTTTCTGCAAAATCTTTGATTTGTATCTCATCCAAATTAAATAAGTAATTAATTGAATCCAACAAATTATTTAACTAATTCTCCATCTATTTATTTATATGGATTTCATCCAAATAAATAATTACTTATTTGAATCATATTCAAATAAATTAATTCTCCATATTATAAAGTCATAATTTGAATGTTATTCAAATAAACTTTATAATAAATTATGTAATTAACTATATCCAATACAATTAATATTTTTCTCATAAATTTAAACATTTCAAATTTTTTTTTTAACATAGTTGATCCTTGTTGGACCATGGTGAGTTAGCAAGGGGACCTTATGGACCTACAGATTATAAGCTCCAGTGATCTAAGATTAATTAATTAAACTCTTTAATTAAATTAATATTCATTTATTAACTACACGGCAAACCACTATAGACCTATAGTTGGACTCTTATGCACTGTAGGACAAATTTTGTCCATGGATATAATCAGTATAAACAAGTTGATCTTTCACGAGCTTTTCATAATTACAACTAGGTCAAATGTTCATTCTACTCCTGTAATTACCTCTTATTCTTAAGTACCACTGATTTCTCTAATGAACAATTTTTTTATGATCCAACCATAAACTAAGTCTCTCTCTGGCCAGTAAGAGAGTGGGGCCCCTTGTTCAAGACCCGAAATCAGCACTTAAAAGAATTATTCATCTACTTACCCTATCTGAAAAGGAGTGAATTTCATCTTGTGAAGTTATGTTCCCAGCTCCCTATTTAGTCAAATCCCCAAAATAGTAGGTTTATTGAGTCGACAACACAGGCCAGTCTCACCCATGTAAATCAAAAGACTGACCTCACAGACAGGAGTTCATAAGTCACTCAGGATTAAGATCGAGTCGCACATGATCATCCTATGAAATATTAATCTCATCAATTAACGGATTTACAAAGAGAGATTAAATATTTCGCGGTCTGGTCTTATACAAACTCTTTGTATAGGATACCCCCACTCACGTGTCCCCACATGAAGGGTTTGGATCAAACCATTTGTAACTATTACAAAGTGAATCGTATCCATAGTATCACTAAGATAAGGCACCCAACCTTATCCATATACTATAGACCTTTAGGTTATTCCTTGAACATGATCCACTCATATGTGAACTACATACATGTTCAAGGCTTCATGCAATAACCTTGGATTTTTTTATTAATGAATAAATTAATATTGCATGATTAATAATTAAATTAATTAACTAATCAATTACGAGGCTTTAGGGCACAAATCCCAACAGTTTCGTCGTGCCTGTCACCCTCCGATCACCACTAGTCTCTTGCAGCCTCGTGGTCGTCCCTCCCACCTTCGCGCCATTGATGCCACCACCGAATCTCACTCGTCGTAGCCCAGCCGCCTTCGCCTCCGCTCCGCCAACCGCCGGCAACTCCCTTCTCACCGAAGTCGTTGGTGTTGGTGGGTTTTTGGTAAGGAAAGTGGTCCCCTTGTTATTTTGTCAGGATTATCTATCATGTTGGCTCAGCCATTGACCCCCTTGTGTACGTTTTAGAAACGACTTTCGAAGGTGCTTGGGAACCAGAAGCAAGGTTGATTTTGGAAGAATTTGTGGTTGGGAATTCGGGACTTGTCTAATTTGTTGACTTTGGCTTTGGTTGCTTTTAGGAATATTCCCCAGGTAAGAAACTTACTATTGATTCTATGTTGATGCCTATGGTTACATATTGCCTGAATTGTGGTTACTATATTGATTGGATTACTGCATTGGTTATTGTGTCCACTGGTACAATGGCTATTGAACTTACTGCTATTAACTGAAAACTTTGGTTGATTATGTTAGTAATGACTACTATGTTACGATGGTTGTTATCCTATTTATCATGCTCTGTACCCTTTTTGACGTGAACCTTTAGGTACACCAACTATGACTACGATTATGTTTACGATTGAGTGTCCCTCGGGATCACCACCTATGTTTATGCTTATGATCGTGGCCTTCGAATCACTGCGTGCCTTCAGGTTCGCTACTTATGTTTATGTCTATGCTTATATTGGGTACACAGGGGCATATGTGTTGTGCGGTATTTTGTATTGTGTTAATTGTCCTAACGCAAAGTGCTAAATGATGTGTTTATGCGTTCAACATATCATGCTTTGAACATTCTATGCGTTCTATTACTATGCGTTGGTGGTCTTGTCAAGTTTTCCTATCCTTTACCCAAGTATAAGCAAAGGAATAGGTGTTCTCAATGAGTCCGAGGTCGAACACAGGGATTATATTGATTCAGTTTTTAGTTGGATTTCATGCGTTACAGTGGTAACCAATAAATATTTGAGAGTTGTTTTTAATCTACGGAAAGCGATTGTTTGTACACTAGACTAAAATTGTGAAAGATGGAAAGCATGCGACAAAGCAAGTTCAGCTAAAGATGTGTGTGAATGGATAAAGGAAGGGTTCGGGTTGATTAACATCTAACATCGGAAACGCACAGTAGTATTCTATTCATACTTGCGACTCTTCTCCCGGTTGTCAGCCGCTATGCGTTATATGTCTATAACGCATAGGAGAGTGTTAAGAACCAAGGTTATCCCATAGACAGGTAACACTACTTGGCCCTTGTCAATTGAGTTCCACAATCACTTACCCTCTCGAGCAGTTTGATTATTACTACTTATATCGATTTGTCAGATGGATATAAGCATCGGATTAAGCTCGCAATTGACAAGATAAAATAGTTACACTATGGTTCCTAGTTAGATGCTAACACAATCCTAGACCCTTGAGTGATTAGTTACTCATGGTTTGAAAGTAAAAAGCGAAAAGTTTAGAGAAATGAGTAGACATGGAAGATAATTATATTGATGAAATGAGATACAATTTTCGATAAGTTCAACGCCTTGATACAAATCTAAAATTAAGATAGAACAATAAGAAAGAAAGTAGGGAAGGTGTCAATGTCTTGAGTCGCCCGGATGGAAGCGTGAGGCTCTGCTGTAAAGTGGTCCGACGGAGGGAAGACTCTTCTCTCTCGAGCTATTTGTCTCCAGCTGAAGTCTGAGAGAACTCTGCTGTCATTTATGGAGTTCTTCCGAGAATCAACAAACTTTCTCATCTCTCAGAGCTGCCCTTTTATAGATGATGCAATCGCAGTTAATGGCAAATCTGCTTGATTGGTGGCGAGATTGATACTGCGTCCATCTCGCCTGATTGCGTGATTCTCGGGCCAATTAAGATCCACCACTTTAGCCACAAATCATGTTCGTCAATCATCCGTCAATCTCTCAAGATTCTGATTTGATTCTCAGCGCCTTGCCTTATTGGTCGTCTATGCGTCCATGAATAGTTTGGCCGATGTCAACGCGTCGTAAGTTGCTAGTGCGTAGTTATGCATTGAGAAGTCATCAACGCATCGTCTGCATTCCTGCGTCAAAACATGCGTTTTAGGCTCAACAAATGATAAAATCATTATCTTCATACAAATACAAGAGTATAACGCAAAGGAAGATTTATTAATAGAATTTAGCATAAACTACCGCATGCTTCTCTATTTAAACTCTATTTATCTATGAAAAAGGTTATAATAACTTGTATTTCTATAAGTTATCAATATGATAAAAGGATAACAACCTCACCTAGTAGACCTAGTAGTGGGTCGTTTACTGAGTATTATTACTCACCCTTTTCTATGGTTTCTTTCTTAGCTAAGGGAAGGTATAAACAGGTGCATGACAAGAGGAATATGTGACTACACCATGGAACTGTTGTCGCTTCCGCATCATAGATTCATGCATTTGCTCTCTAAGACAAAGTGTCTTGTTGGTGACCACGTAGGGCAGTGATCATTTAGTCATTCATTCTTTCCTTTGTTTTTTTATTTTTTATTTTTATTTATTTTATGAAATTCTTGGTCAAACTTGTCTTCATGTATTTAAGAGGACCCTATTAAACGATTTGCTATTTTTATATTTGATTTAAATAAATTATTCAGAATTCTTTCTGTGCGGTATGATGTTAAAATGTGTCTCATTACCTAAGTCCCAAAGTGCTTTACGAAAATTTTCATGCACAGTGTAGCGTCCAACTAGTCTAAAGGTCGGGTTGTTACATTCATAAACATGATTTTACATGGAAAGAAGACATACCTTTGAAGGCTTTCTTCAAGGAATCCTCTCCACGTAATTTCATGAACAACCGCGAACTATGAAAATCTCACTCGAACTCAAAGATCCTTCCAAGAACACCATCAATCACCAAGACACCATCACTGGGTCTTCCTTGCTATTCTCAGGACAAAGAGCAGGATGGTGGGAGCCTTCTTGTTTTGAAAAGATAAAAAAGAAGAGTGTAGAGAGATTTTCAGAGTTTTTGTTGTTTCTTGTTCTGTAACTTTTCTTACAAAATCTCAAAAAATTTATTCATTGAGAGGTGATAAGTGGAGAGGGAGTTATAACTCCCCTCCATTATCCGATTCTAATATTTATATTATTTAAATAATATAGTGAATCTAATTTAATATATAATTAAATAATAATATTAATTAATTAATAATTAATGATAATTAAATATCATATATTTAATTTAATTTGAATCATATTCAAATCACCTCCTCTCACATGACATATGGTTTTAATATGAATCTCATTATATTAATTTTAACCTACGGTTTTAATATGAATCTTATTCATATTAATTTATAACCAATAGTAATTATTTGAATCTCATTCATATCATTAATATTTGAATCACACTCAAATATATTGCTCTCATATAATAAAGTATAATTTTGAATCTCATTCAAAATTAACTTTATATTATAATGTATCTATATACGCTATATTAATTTGAATCTTATTCAAATATTTATCTCTCTCATATACATAGTATTAATTATAAATCATATCTACAATTGACTATATTTTATGATGCATCAATGTACATTATCTTTATATTAATCACATTTATATAAATCACACTTCTATATCCTTTAAATAATTTGAACAATTCAAATTATTCCAAAGCCATTTATTCCTTGTTTTATCCTTAGTGAGCTAGCAAGGGGATGTAATGGACCTACAAATTAGAAGTTTCAATGATACAAAATTAATTAATTAAACTCTTTAATTAATTTAATCAACATTCAATAACCACAAGTCATTCCACTAAAGGCCTACAACTGAACTATTCACATTGTAGATATATTTATGTGTCCACGGATATAACCAATCAATAGAGAGTCAACCATTCATAAATTGCTCGTAATTACAACTGACCGTTTTACACCTGTAATTACATTTAACTCCTTAAGTCTCACTAATCCTCTAATGAACAACATGTTTATGGTTCTACCATAAACAAAATCCTCTCGGGTTAGTGAGAGAGAGGGGCCCTATTGTTGAATACCCAGAGTTAGCACGTAAGGAGCAATTCATCTACTTACCCTAAAGACGGAAAAGACTGAATTCCATCTTGTGTAGTTATGTTTCCAGCTCCCTACTTGGACAAATTCCCAAAACTGTAGGCATATTGAGTCATCGAATCTAGTCACTTTTACCCATACAGATCAAAGGATTACCTTCATAGACAAGAGTTCATAAACCACTTAAGATTAAGGTCAATAGTGTTATAAAGAGAGATTAATTATTTCGCGATTCGATCTCATACAAACTCACAAAAAATTAAAAAAATGGTGAAAGAGTGGAATTGATTGCTGGCCATTTCTTCATTCTAAGGATAGCTTGTAATGTGCCATCGTAAGCTATGCGGAGTTCATGAATGAGAGAAAATGGGAAAATGACATTAGAAGAGGGACGCTATACGCAGGATGGGAGAGTAAGGAAGGTCGTAATGTGAAGAGAGAAGGGGGACAAATGGGGGGGAATCCTACGCCCAAGTTGGTTTATTTCTCTCAGTGTGACGCAAAAAAATATTATTTAAATTCCTTACTGGGTGCATGGATGGGAAAGGGTAATGATTATTTTCTTACATGATTTTTCTATTTTTTAAAAAGAAAATTGGATAAATTAACCATAACATTAGTAAAAAAATAAAAATTAATAATATAATATAGCTTTCAATTAAGATGTACGATGTGGAAAACCAATTCAATATTGTGTGCCCCGCAGCCCATCTTCTACTTTATCCCTACAGTAGGCCCAATCCATAGCATTCTTCGCAGCCCATCGGCCCACTCAACTACTCACAAACCCTAGCCGCTTGCTCCTTCTCCTTCTCTTTTCACGGCTGCTCCCTCCCTCCCTTTTTACTTCTTCTCCTTCTCCTTCTCCTTCTTCCCGCCTCTTCCCTCTACTGCTGCTGTCTTCAGTTCTTGCTGAGCTTCAACCATGGTACCTTTCTTCTTCTTCTTCTTCTCCTTCTTCTCCAACTCTCTCTTCTATATAACTTTCTCTACTTTATGTTTGTTTCTGTTTTCTGGGTCCTTGCGTATTGGGGTATTCCAAAAGGAATCGATCTGGTAGTGGGAATTGCTACCCTTTTGTGCATTTTGAATTGTTGTAGTGGGTCAAGTTTTATTGCGTCTGAGATGGCGATATTTATTTAGTAGGGATTAGGACTCTCATATTCATTTCATTATTTTCTTCAGATTATTTCAGAAAAAAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGGTATAACCAAACTCAACCCACTCCTAATCTTGCGTTTTTCTTTTCAATTTTCTGAGGCGAGGATGATCTCGTGATTTTATTTATTCGTTGTTGTTATCATTCCAGAGGGGGTCTGCTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATCTGCAGGTTATTAAGCTGATGCAAAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATCGAGTTCCTCAGGACTTACCTTAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGACCCTTTGGCGGACCACCCGGCGATCGCCCACGGTATAAATTATATCTATAGCACCGATCAATTCATTAGGGTTTGTTGCTTATTCATCTGTGCTATTGTGCTACGGATTATGGATTCTGTTGTTCTAGTTGTAGATTTGGGGATGGATGTGTATTTATAATGTTCGATATGATAGTAAAATGTAAGGGCAAGGGCATATTTGAGTAGCTGTCTGTAATTTGCATTTGTTTTGTTATTCAGTAAGTTGTATCTATTATTGTTAGAATTCTTATTGAGTTGTGGTGACTCTTATGAATTAGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGAAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCCGGTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCATTTGGGGTAATTTTTATAGAATCGTCATAGTGCTATATATAATGTGGTTGATGCTCTCTACATAAAAATGCTATTTTTTATTGCTTCTGTTCTGCACTTGGGGTTGTTATTGGAGAACGTTATTAAAAGAAATACAATCATTGTTCATGTATCTAATTAGGACACATGAACAATGATTAAAAGAAATACAATCATTGTTCATGTATCTAATAACGTTTTTATTAAGTTAACGGCCTTGTGCAGTGAGATGGTTAAATGGTTTTGAGATTCTTTAGTGATTCATTCATGAGTCGATTGGATGACATCTTATAGTTATAGATTAGTCTCTTCATCTGTTGATGCTTTCCTCCAAACGTACTTCCTAATCAGTTTGCTTGCTCGGCTAATAACTTAGTTAAAATGTTTAGGCATTGTGCCATGGTCTGTTCATTTTCAATACAATGATTTTCTAGGACCCAAGTGATTACTGATTTCAATGTGGGGTTAACTGTATTTGACTAGGCATATTTAAACCCTTCGCTATTTAGGTACTAGGTGAACATGAAGGGTAGTGGCATAATTAGACAAATGGGTAGCTGAAATATTAGAAATGATTTTATGATAGTCATTTATGTGTGTGTTTCAGTGAAAGTTTGGTTATTCATAAAAGAAGTTTGTGATAGTCGTTTGCTAGTTGTTTCTTGACTGTTTTGTTGATTGTTGTTTCATACTTAAAAAAAATTTCAGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCTTGAAAAGTATGGTCTTACAAGCAGTTCAATGAATTTTCAGTGGAATGAGTTAGCAGCTTGATTGAAGAGTTTGTTAGCTTTTTTCCCTTTCATTTAGCTTATGGGAATCTTATAAATTCAAATTTTCATTGTGCAAATTGAAGTTTAGTGGAACTACTGCTTTGCAAGTATAAATTTTGTTCTTCTCTTTAAGGGCCTTACTATTATTGGTAGCCTGTGAGCAAGATTGAGATTTTAATGTTTTGAATTCT

mRNA sequence

ATGCCACCAGTCACTCGAGCCTACAGGAACTCCTTCGCTGAGGTCTTGCTCTCGCTCTCGCTCGTCACTGCCATCGCCATTGTCTCGCTCGGTGGTCTAGCTCTCGGCTCGGAAAAAAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTCTGCTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATCTGCAGGTTATTAAGCTGATGCAAAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATCGAGTTCCTCAGGACTTACCTTAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGACCCTTTGGCGGACCACCCGGCGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGAAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCCGGTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCATTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCTTGAAAAGTATGGTCTTACAAGCAGTTCAATGAATTTTCAGTGGAATGAGTTAGCAGCTTGATTGAAGAGTTTGTTAGCTTTTTTCCCTTTCATTTAGCTTATGGGAATCTTATAAATTCAAATTTTCATTGTGCAAATTGAAGTTTAGTGGAACTACTGCTTTGCAAGTATAAATTTTGTTCTTCTCTTTAAGGGCCTTACTATTATTGGTAGCCTGTGAGCAAGATTGAGATTTTAATGTTTTGAATTCT

Coding sequence (CDS)

ATGCCACCAGTCACTCGAGCCTACAGGAACTCCTTCGCTGAGGTCTTGCTCTCGCTCTCGCTCGTCACTGCCATCGCCATTGTCTCGCTCGGTGGTCTAGCTCTCGGCTCGGAAAAAAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTCTGCTATGCCAAGAAGGACTACAATTTGGCCAAGCACCCAGAAATCGATGTGCCTAATCTGCAGGTTATTAAGCTGATGCAAAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCTTGGATGCATTACTACTGGTACCTCACCAATGATGGCATCGAGTTCCTCAGGACTTACCTTAATCTTCCTTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGACCCTTTGGCGGACCACCCGGCGATCGCCCACGGGGTCCACCTCGTTTTGAGGGTGGTGAGAGAAGGTTTGGTGACCGTGATGGCTACCGTGGAGGTCCTCGTGGACCCGGTGGTGAATTTGGTGGTGACAAGGGAGGAGCTCCTGCAGATTACAGGCCTTCATTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGCTATGGCGGAGGAGCTGCAGCAAGCTCAAACCTTCCTTGA

Protein sequence

MPPVTRAYRNSFAEVLLSLSLVTAIAIVSLGGLALGSEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP

Homology

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BLAST of Clc07G07400 vs. NCBI nr
Match: XP_004146529.1 (40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein Csa_014962 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 6.4e-95
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 64  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Sbjct: 124 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP 182

[Close]

BLAST of Clc07G07400 vs. NCBI nr
Match: XP_022985005.1 (40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosomal protein S10-1-like [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 8.3e-95
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 64  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Sbjct: 124 GDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 182

[Close]

BLAST of Clc07G07400 vs. NCBI nr
Match: KAA0044841.1 (40S ribosomal protein S10-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 17  SQKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 76

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 77  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 136

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Sbjct: 137 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP 195

[Close]

BLAST of Clc07G07400 vs. NCBI nr
Match: TYK16623.1 (40S ribosomal protein S10-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-94
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 27  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 86

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 87  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 146

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Sbjct: 147 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP 205

[Close]

BLAST of Clc07G07400 vs. NCBI nr
Match: XP_008452010.1 (PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-94
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 64  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Sbjct: 124 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP 182

[Close]

BLAST of Clc07G07400 vs. ExPASy Swiss-Prot
Match: Q9SW09 (40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-73
Identity = 140/179 (78.21%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G   RF
Sbjct: 64  YYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDRPRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Sbjct: 124 GDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSGFP 177

[Close]

BLAST of Clc07G07400 vs. ExPASy Swiss-Prot
Match: P0DKK8 (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.2e-73
Identity = 142/177 (80.23%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 38  EKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHY 97
           +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +Y
Sbjct: 5   KKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYY 64

Query: 98  YWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGGERRF 157
           YWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG   RF
Sbjct: 65  YWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRF 124

Query: 158 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS 213
           GDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +SS
Sbjct: 125 GDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSSS 181

[Close]

BLAST of Clc07G07400 vs. ExPASy Swiss-Prot
Match: P0DKK9 (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.2e-73
Identity = 142/177 (80.23%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 38  EKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHY 97
           +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +Y
Sbjct: 5   KKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYY 64

Query: 98  YWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG-GPPGDRPRGPPRFEGGERRF 157
           YWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRPFG GPPGDRPRGPPRFEG   RF
Sbjct: 65  YWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRF 124

Query: 158 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGR-GAGSYGGGAAASS 213
           GDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGR G G +G G  +SS
Sbjct: 125 GDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGPTSSS 181

[Close]

BLAST of Clc07G07400 vs. ExPASy Swiss-Prot
Match: Q9LTF2 (40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2)

HSP 1 Score: 271.9 bits (694), Expect = 6.0e-72
Identity = 144/180 (80.00%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER-R 156
           YYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+R R
Sbjct: 64  YYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGDRPR 123

Query: 157 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           FGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S LP
Sbjct: 124 FGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGSGLP 179

[Close]

BLAST of Clc07G07400 vs. ExPASy Swiss-Prot
Match: Q9FFS8 (40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-67
Identity = 143/178 (80.34%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWM 96
           SE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWM
Sbjct: 4   SETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWM 63

Query: 97  HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR 156
           HYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + GERR
Sbjct: 64  HYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-GERR 123

Query: 157 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS 212
           FGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA S
Sbjct: 124 FGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAGS 177

[Close]

BLAST of Clc07G07400 vs. ExPASy TrEMBL
Match: A0A0A0KUQ3 (S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.1e-95
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 64  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Sbjct: 124 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP 182

[Close]

BLAST of Clc07G07400 vs. ExPASy TrEMBL
Match: A0A6J1JA51 (40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.0e-95
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 64  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP
Sbjct: 124 GDRDGYRGGPRGPAGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 182

[Close]

BLAST of Clc07G07400 vs. ExPASy TrEMBL
Match: A0A5A7TTJ6 (40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001330 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.9e-95
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 17  SQKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 76

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 77  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 136

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Sbjct: 137 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP 195

[Close]

BLAST of Clc07G07400 vs. ExPASy TrEMBL
Match: A0A5D3CXK7 (40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004510 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.0e-95
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 27  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 86

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 87  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 146

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Sbjct: 147 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP 205

[Close]

BLAST of Clc07G07400 vs. ExPASy TrEMBL
Match: A0A1S3BST3 (40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.0e-95
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF
Sbjct: 64  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAA SSNLP
Sbjct: 124 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGGGAAPSSNLP 182

[Close]

BLAST of Clc07G07400 vs. TAIR 10
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-74
Identity = 140/179 (78.21%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RGPPR +G   RF
Sbjct: 64  YYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDRPRF 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           GDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Sbjct: 124 GDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSGFP 177

[Close]

BLAST of Clc07G07400 vs. TAIR 10
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 271.9 bits (694), Expect = 4.3e-73
Identity = 144/180 (80.00%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGER-R 156
           YYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGPPGDR RG PR EGG+R R
Sbjct: 64  YYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRG-PRHEGGDRPR 123

Query: 157 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
           FGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A + S LP
Sbjct: 124 FGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSG--RGFGRGAGGYSAAAPSGSGLP 179

[Close]

BLAST of Clc07G07400 vs. TAIR 10
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 255.4 bits (651), Expect = 4.2e-68
Identity = 143/178 (80.34%), Postives = 156/178 (87.64%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWM 96
           SE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWM
Sbjct: 4   SETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWM 63

Query: 97  HYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERR 156
           HYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + GERR
Sbjct: 64  HYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGD-GERR 123

Query: 157 FGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAAS 212
           FGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA S
Sbjct: 124 FGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAGS 177

[Close]

BLAST of Clc07G07400 vs. TAIR 10
Match: AT4G25740.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 222.2 bits (565), Expect = 3.9e-58
Identity = 117/179 (65.36%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 37  SEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMH 96
           SE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMH
Sbjct: 4   SENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMH 63

Query: 97  YYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGERRF 156
           YYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRPFGGP G                
Sbjct: 64  YYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRG---------------- 123

Query: 157 GDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAASSNLP 216
                            G +KGGAPAD++PSF G GGRPGFGRGAG Y   A + S  P
Sbjct: 124 -----------------GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGSGFP 149

[Close]

BLAST of Clc07G07400 vs. TAIR 10
Match: AT5G41520.2 (RNA binding Plectin/S10 domain-containing protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-49
Identity = 110/135 (81.48%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 79  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGP 138
           MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG 
Sbjct: 1   MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 60

Query: 139 PGDRPRGPPRFEGGERRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPG 198
            GDRPRGPPR + GERRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R G
Sbjct: 61  GGDRPRGPPRGD-GERRFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQG 120

Query: 199 FGRGAGSYGGGAAAS 212
           FGRGAG +GGGAA S
Sbjct: 121 FGRGAGGFGGGAAGS 131

The following BLAST results are available for this feature:

BLAST of Clc07G07400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146529.1	6.4e-95	99.44	40S ribosomal protein S10-1 [Cucumis sativus] >KGN53350.1 hypothetical protein C...	[more]
XP_022985005.1	8.3e-95	99.44	40S ribosomal protein S10-1-like [Cucurbita maxima] >XP_022985006.1 40S ribosoma...	[more]
KAA0044841.1	1.4e-94	98.88	40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]	[more]
TYK16623.1	1.9e-94	98.88	40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]	[more]
XP_008452010.1	1.9e-94	98.88	PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]	[more]

BLAST of Clc07G07400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW09	2.4e-73	78.21	40S ribosomal protein S10-1 OS=Arabidopsis thaliana OX=3702 GN=RPS10A PE=1 SV=1	[more]
P0DKK8	4.2e-73	80.23	40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-1 ...	[more]
P0DKK9	4.2e-73	80.23	40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS10-2 ...	[more]
Q9LTF2	6.0e-72	80.00	40S ribosomal protein S10-3 OS=Arabidopsis thaliana OX=3702 GN=RPS10C PE=1 SV=2	[more]
Q9FFS8	5.8e-67	80.34	40S ribosomal protein S10-2 OS=Arabidopsis thaliana OX=3702 GN=RPS10B PE=2 SV=1	[more]

BLAST of Clc07G07400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUQ3	3.1e-95	99.44	S10_plectin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049090...	[more]
A0A6J1JA51	4.0e-95	99.44	40S ribosomal protein S10-1-like OS=Cucurbita maxima OX=3661 GN=LOC111483100 PE=...	[more]
A0A5A7TTJ6	6.9e-95	98.88	40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3CXK7	9.0e-95	98.88	40S ribosomal protein S10-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BST3	9.0e-95	98.88	40S ribosomal protein S10-1-like OS=Cucumis melo OX=3656 GN=LOC103493145 PE=4 SV...	[more]

BLAST of Clc07G07400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25740.1	1.7e-74	78.21	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G52650.1	4.3e-73	80.00	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.1	4.2e-68	80.34	RNA binding Plectin/S10 domain-containing protein	[more]
AT4G25740.2	3.9e-58	65.36	RNA binding Plectin/S10 domain-containing protein	[more]
AT5G41520.2	2.5e-49	81.48	RNA binding Plectin/S10 domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 35..137 e-value: 2.4E-45 score: 154.7
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 38..127 e-value: 4.5E-42 score: 142.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..215
None	No IPR available	PANTHER	PTHR12146:SF20	40S RIBOSOMAL PROTEIN S10-1-LIKE	coord: 32..215
IPR037447	40S Ribosomal protein S10	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 32..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G07400.2	Clc07G07400.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022627	cytosolic small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome